51. Multiclass Carcinogenic DNA Adduct Quantification in Formalin-Fixed Paraffin-Embedded Tissues by Ultraperformance Liquid Chromatography-Tandem Mass Spectrometry
- Author
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Lihua Yao, Thomas A. Rosenquist, Arthur P. Grollman, Robert J. Turesky, Jingshu Guo, Sesha Krishnamachari, Byeong Hwa Yun, and Pramod Upadhyaya
- Subjects
0301 basic medicine ,Male ,Colon ,Urinary Bladder ,Aristolochic acid ,Tandem mass spectrometry ,Article ,Analytical Chemistry ,03 medical and health sciences ,chemistry.chemical_compound ,DNA Adducts ,Mice ,0302 clinical medicine ,Liquid chromatography–mass spectrometry ,Tandem Mass Spectrometry ,Formaldehyde ,DNA adduct ,Deoxyguanosine ,Organic chemistry ,Animals ,Rats, Wistar ,Lung ,Pancreas ,Carcinogen ,Chromatography, High Pressure Liquid ,Chromatography ,Paraffin Embedding ,Molecular Structure ,Aristolochia ,Rats ,030104 developmental biology ,chemistry ,Liver ,030220 oncology & carcinogenesis ,Carcinogens ,Pyrene ,Aristolochic Acids ,Female ,DNA - Abstract
DNA adducts are a measure of internal exposure to genotoxicants and an important biomarker for human risk assessment. However, the employment of DNA adducts as biomarkers in human studies is often restricted because fresh-frozen tissues are not available. In contrast, formalin-fixed paraffin-embedded (FFPE) tissues with clinical diagnosis are readily accessible. Recently, our laboratory reported that DNA adducts of aristolochic acid, a carcinogenic component of Aristolochia herbs used in traditional Chinese medicines worldwide, can be recovered quantitatively from FFPE tissues. In this study, we have evaluated the efficacy of our method for retrieval of DNA adducts from archived tissue by measuring DNA adducts derived from four other classes of human carcinogens: polycyclic aromatic hydrocarbons (PAHs), aromatic amines, heterocyclic aromatic amines (HAAs), and N-nitroso compounds (NOCs). Deoxyguanosine (dG) adducts of the PAH benzo[a]pyrene (B[a]P), 10-(deoxyguanosin-N(2)-yl)-7,8,9-trihydroxy-7,8,9,10-tetrahydrobenzo[a]pyrene (dG-N(2)-B[a]PDE); the aromatic amine 4-aminobiphenyl (4-ABP), N-(deoxyguanosin-8-yl)-4-aminobiphenyl (dG-C8-4-ABP); the HAA 2-amino-1-methyl-6-phenylimidazo[4,5-b]pyridine (PhIP), N-(deoxyguanosin-8-yl)-PhIP (dG-C8-PhIP); and the dG adducts of the NOC 4-(methylnitrosamino)-1-(3-pyridyl)-1-butanone (NNK), O(6)-methyl-dG (O(6)-Me-dG) and O(6)-pyridyloxobutyl-dG (O(6)-POB-dG), formed in liver, lung, bladder, pancreas, or colon were recovered in comparable yields from fresh-frozen and FFPE preserved tissues of rodents treated with the procarcinogens. Quantification was achieved by ultraperformance liquid chromatography coupled with electrospray ionization ion-trap multistage mass spectrometry (UPLC/ESI-IT-MS(3)). These advancements in the technology of DNA adduct retrieval from FFPE tissue clear the way for use of archived pathology samples in molecular epidemiology studies designed to assess the causal role of exposure to hazardous chemicals with cancer risk.
- Published
- 2016