62 results on '"RoyChaudhuri, C."'
Search Results
52. Competitive Impedance Spectroscopy in a Schottky-Contacted ZnO Nanorod Structure for Ultrasensitive and Specific Biosensing in a Physiological Analyte.
- Author
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Chakraborty B, Mandal N, Das N, Samanta N, and RoyChaudhuri C
- Subjects
- Dielectric Spectroscopy, Hepatitis B Surface Antigens, Vascular Endothelial Growth Factor A, Nanotubes chemistry, Zinc Oxide chemistry
- Abstract
To enable detection and discovery of biomarkers, development of label-free, ultrasensitive, and specific sensors is the need of the hour. For addressing this requirement, here, a Schottky-contacted ZnO nanorod biosensor has been demonstrated, which explores the interplay between Schottky junction capacitance and solution resistance, resulting in an interesting sensing principle of competitive impedance spectroscopy. When the transition of dominating impedance occurs from solution resistance to junction capacitance, a notch or a peak appears in the impedance response at a particular frequency (referred to as the corner frequency) depending on the charge of the target molecule. The appearance of the peak or notch acts like an electronic label for selectivity since it is visible only for target molecules even at ultralow concentrations in the physiological analyte, where the magnitude of impedance change overlaps with that for nonspecific molecules. This phenomenon has been successfully applied for the positively charged vascular endothelial growth factor (VEGF) and the negatively charged hepatitis B surface antigen (HBsAg), where the shifts in the higher corner frequencies for 1 aM concentration of the target molecules have been observed to be more than 3 times the changes in the impedance magnitude. Further, the area of the ZnO nanorods was segmented into two zones corresponding to the lower and higher concentration regimes, thereby expanding the dynamic range. To summarize, an ultralow detection limit of 1 aM with a dynamic range up to 1 pM was achieved for VEGF and HBsAg, which is 4 orders of magnitude and 20 times lower than their most sensitive label-free reports, respectively.
- Published
- 2022
- Full Text
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53. A review on nanopores based protein sensing in complex analyte.
- Author
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Das N, Chakraborty B, and RoyChaudhuri C
- Subjects
- Nanotechnology, Proteins, Nanopores
- Abstract
Solid-state nanopore has the ability to detect proteins at a single-molecule level with its high sensitivity, high-throughput, and low cost. Improvements in fabrication, functionalization, and characterization of solid-state nanopores keep evolving. Various analytical methods targeted towards diagnostic applications using nanopore-based devices are appearing. This review article provides an overview of recent progress in the field of solid-state and biological nanopores for protein detection in a complex analyte. The advantages and challenges involved in nanopore sensing have been discussed. Further, the review surpasses the steady-state resistive pulse techniques of sensing and incorporate transient variations in the nanopore conductance. Application of the power spectral density of these fluctuations toward sensing has been highlighted with importance on reducing the detection limit in a complex environment. Lastly, the current problems and future perspectives have been discussed with a perspective to increase nanopores performance towards diagnostic applications in complex medium., (Copyright © 2022 Elsevier B.V. All rights reserved.)
- Published
- 2022
- Full Text
- View/download PDF
54. PSA detection using label free graphene FET with coplanar electrodes based microfluidic point of care diagnostic device.
- Author
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Mandal N, Pakira V, Samanta N, Das N, Chakraborty S, Pramanick B, and RoyChaudhuri C
- Subjects
- Electrodes, Graphite, Humans, Male, Microfluidics, Point-of-Care Systems, Point-of-Care Testing, Biosensing Techniques, Prostate-Specific Antigen analysis
- Abstract
Affordable point-of-care (PoC) diagnostic devices enable detection of prostate specific antigen (PSA) in resource limited settings. Despite the advancements in PoC systems, most of the reported methods for PSA detection have unsatisfactory detection limits and are based on labelled assays, requiring multiple reagent flow steps which increases both expenses and inconvenience. Circumventing these constraints, we report here the development and validation of a label free, affordable dielectrophoresis (DEP) based graphene field effect transistor (FET) sensor implemented using coplanar electrodes and integrated uniquely with a compact disc based microfluidic platform along with electronics readout for the estimation of PSA at the point of care. Design of coplanar gate electrode which has not been explored earlier is not a straightforward approach. In fact, it has been observed that there is a non-monotonic dependence of the capture of PSA molecules in the channel region of the FET with varying widths and spacings of the gate electrode. The graphene FET based PoC device with optimized coplanar gate electrode is the only label free analytical system for PSA detection requiring simple operation and achieving a detection limit of 1 pg/ml in serum with a wide dynamic range upto 4 ng/ml and appreciable selectivity against potential interferents like bovine serum albumin (BSA) and human immunoglobulin G (IgG). Further, it has been validated satisfactorily with commercially available existing systems using human serum samples. Moreover, the proposed sensing system lowers the detection limit by three orders of magnitude compared to a recent study on label free PoC device on other cancer biomarkers., (Copyright © 2020 Elsevier B.V. All rights reserved.)
- Published
- 2021
- Full Text
- View/download PDF
55. Modeling the Effective Conductance Drop Due to a Particle in a Solid State Nanopore Towards Optimized Design.
- Author
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Das N, Ropmay GD, Joseph AM, and RoyChaudhuri C
- Subjects
- Microscopy, Electron, Scanning, Models, Theoretical, Nanotechnology, Particle Size, Electric Conductivity, Nanopores
- Abstract
An understanding of the current change in a solid state nanopore due to particle movement or capture is crucial for improvement of nanopore based sensing technologies. For lower aspect ratio pores, which are gaining importance due to their high sensitivity, there is interplay between access and pore resistance and the existing theories for computation of access resistance cannot explain most of the experimental observations. Hence, there is a need to develop a comprehensive model for calculating the effective conductance drop in presence of particles in a solid state nanopore. In this paper, we develop analytical models to calculate both the access and pore resistance in presence of particle at different positions during translocation and also when captured by receptors in functionalized nanopores. A wide range of pore geometry and molar strength has been investigated. Taking into consideration the positional uncertainty during particle translocation, the effective resistance sensitivity has been found to agree very well with the experimental observations in low aspect ratio pore. Additionally, we observe that in functionalized nanopores, a pore of higher diameter results in around 50% increase in sensitivity compared to a pore with half its diameter, which indicates the scope of design optimization in such systems.
- Published
- 2020
- Full Text
- View/download PDF
56. Liaison between heme metabolism and bioenergetics pathways-a multimodal elucidation for early diagnosis of oral cancer.
- Author
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Sarkar R, Chatterjee K, Ojha D, Chakraborty B, Sengupta S, Chattopadhyay D, RoyChaudhuri C, and Barui A
- Subjects
- 5-Aminolevulinate Synthetase biosynthesis, ATP Binding Cassette Transporter, Subfamily G, Member 2 biosynthesis, Adult, Aged, Down-Regulation, Energy Metabolism, Female, Ferrochelatase biosynthesis, Gene Expression, Heme Oxygenase-1 biosynthesis, Humans, Leukoplakia, Oral pathology, Male, Middle Aged, Neoplasms, Squamous Cell pathology, Oxidation-Reduction, RNA, Messenger, Real-Time Polymerase Chain Reaction, Spectroscopy, Fourier Transform Infrared, Up-Regulation, Cigarette Smoking pathology, Early Detection of Cancer methods, Heme metabolism, Mouth Neoplasms pathology, Protoporphyrins biosynthesis
- Abstract
Metabolic alterations of oral epithelial cells under oxidative stress are important signatures for early diagnosis of oral cancer. Amongst different metabolic alterations, non-invasive photo-diagnostic methods have been extensively used for determining cellular heme metabolism and accumulation of protoporphyrin IX (PpIX) under administration of suitable photosensitizer. In this study, we report these metabolic alterations by direct analysis of oral exfoliated cells obtained from individuals with prolonged smoking habit without the exogenous administration of any photosensitizer. The relative expression level of relevant biomolecules of study groups were compared with clinically diagnosed and histopathologically confirmed leukoplakia (OLPK) and oral squamous cell carcinoma (OSCC) patients. The energy imbalance and variation in 'redox ratio' were examined through spectroscopic studies which showed an increasing trend (p < 0.001) in smokers to OSCC groups in comparison to nonsmoker control. Gene expression of important intermediates of the heme metabolic pathway (viz. 5-aminolevulinate synthase 1 (ALAS1), Ferrochelatase (FECH), hemeoxygenase 1 (HO-1) and ATP binding cassette subfamily G member 2 (ABCG2)) which affect production of PpIX was assessed. Relative mRNA level of ALAS1 and HO1 was upregulated whereas mRNA level of other genes (viz. FECH and ABCG2) were found to be downregulated in smokers as well as in cancer groups. Outcome of different spectroscopic studies on exfoliated cells (viz. fluorescence, atomic absorption and Fourier transform infrared spectroscopy) corroborated with the expression of biomarkers related to cellular endogenous metabolism related to heme cycle. This study indicates significant alterations in endogenous metabolic products, and cellular functional groups in oral epithelial cells among the study groups. Our study reports a strong possibility of diagnosis of early cancer signatures amongst habitual smokers by direct and non-invasive assessment of metabolic status of oral epithelial cells without exogenous administration of photosensitizers. The knowledge accrued from the study may guide clinicians in precise detection of precancer trend in the susceptible population through a noninvasive rapid screening method., (Copyright © 2018 Elsevier B.V. All rights reserved.)
- Published
- 2018
- Full Text
- View/download PDF
57. Risk prediction for oral potentially malignant disorders using fuzzy analysis of cytomorphological and autofluorescence alterations in habitual smokers.
- Author
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Sarkar R, Dey S, Pal M, Paul RR, Chatterjee J, RoyChaudhuri C, and Barui A
- Subjects
- Adult, Cytarabine, Early Detection of Cancer, Female, Fuzzy Logic, Humans, Image Processing, Computer-Assisted, Male, Microscopy, Fluorescence, Middle Aged, Mouth Neoplasms epidemiology, Precancerous Conditions diagnosis, Precancerous Conditions etiology, Risk Assessment, Mouth Mucosa pathology, Mouth Neoplasms diagnosis, Mouth Neoplasms etiology, Smoking adverse effects
- Abstract
Aim: This study aims to develop a novel noninvasive method for early cancer trend diagnosis in habitual smokers by corroborating cytomorphological and autofluorescence alterations., Materials & Methods: A total of 120 subjects were included and categorized into nonsmoker, smoker and clinically diagnosed oral potentially malignant disorder (OPMD) patients. Oral exfoliative epithelial cells were studied through differential interference contrast and fluorescence microscopy. Fuzzy trend analysis was performed using measured parameters for determining the risk factors among smokers., Results: The risk assessment in this study showed a positive correlation of smoking duration with early cancer risk factors with a correlation co-efficient of 0.86., Conclusion: Alterations in cellular morphology and autofluorescence intensities showed positive correlation with OPMD. The present study will benefit to investigate early prediction of OPMD among susceptible individuals.
- Published
- 2017
- Full Text
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58. Graphene Nanogrids FET Immunosensor: Signal to Noise Ratio Enhancement.
- Author
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Basu J and RoyChaudhuri C
- Abstract
Recently, a reproducible and scalable chemical method for fabrication of smooth graphene nanogrids has been reported which addresses the challenges of graphene nanoribbons (GNR). These nanogrids have been found to be capable of attomolar detection of biomolecules in field effect transistor (FET) mode. However, for detection of sub-femtomolar concentrations of target molecule in complex mixtures with reasonable accuracy, it is not sufficient to only explore the steady state sensitivities, but is also necessary to investigate the flicker noise which dominates at frequencies below 100 kHz. This low frequency noise is dependent on the exposure time of the graphene layer in the buffer solution and concentration of charged impurities at the surface. In this paper, the functionalization strategy of graphene nanogrids has been optimized with respect to concentration and incubation time of the cross linker for an enhancement in signal to noise ratio (SNR). It has been interestingly observed that as the sensitivity and noise power change at different rates with the functionalization parameters, SNR does not vary monotonically but is maximum corresponding to a particular parameter. The optimized parameter has improved the SNR by 50% which has enabled a detection of 0.05 fM Hep-B virus molecules with a sensitivity of around 30% and a standard deviation within 3%. Further, the SNR enhancement has resulted in improvement of quantification accuracy by five times and selectivity by two orders of magnitude., Competing Interests: The authors declare no conflict of interest. The founding sponsors had no role in the design of the study; in the collection, analyses, or interpretation of data; in the writing of the manuscript, and in the decision to publish the results.
- Published
- 2016
- Full Text
- View/download PDF
59. A review on amperometric-type immunosensors based on screen-printed electrodes.
- Author
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Mistry KK, Layek K, Mahapatra A, RoyChaudhuri C, and Saha H
- Subjects
- Biosensing Techniques, Electrochemical Techniques instrumentation, Electrodes, Immunoassay instrumentation
- Abstract
In this brief review, we summarize the recent research activities involved in the development of amperometric-type immunosensors based on screen-printed electrodes (SPEs). We focus on the underlying principle involved in these types of sensors, their fabrication and electrode surface modification. We also discuss the various factors involved in the designing of such immunosensors and how they affect their performances. Finally we provide an insight into the drawbacks associated with these SPEs.
- Published
- 2014
- Full Text
- View/download PDF
60. Palladium-silver-activated ZnO surface: highly selective methane sensor at reasonably low operating temperature.
- Author
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Ghosh S, Roychaudhuri C, Bhattacharya R, Saha H, and Mukherjee N
- Abstract
Metal oxide semiconductors (MOS) are well known as reducing gas sensors. However, their selectivity and operating temperature have major limitations. Most of them show cross sensitivity and the operating temperatures are also relatively higher than the value reported here. To resolve these problems, here, we report the use of palladium-silver (70-30%) activated ZnO thin films as a highly selective methane sensor at low operating temperature (∼100 °C). Porous ZnO thin films were deposited on fluorine-doped tin oxide (FTO)-coated glass substrates by galvanic technique. X-ray diffraction showed polycrystalline nature of the films, whereas the morphological analyses (field emission scanning electron microscopy) showed flake like growth of the grains mainly on xy plane with high surface roughness (107 nm). Pd-Ag (70-30%) alloy was deposited on such ZnO films by e-beam evaporation technique with three different patterns, namely, random dots, ultrathin (∼1 nm) layer and thin (∼5 nm) layer as the activation layer. ZnO films with Pd-Ag dotted pattern were found show high selectivity towards methane (with respect to H2S and CO) and sensitivity (∼80%) at a comparatively low operating temperature of about 100°C. This type of sensor was found to have higher methane selectivity in comparison to other commercially available reducing gas sensor.
- Published
- 2014
- Full Text
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61. Assessment of molecular events during in vitro re-epithelialization under honey-alginate matrix ambience.
- Author
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Barui A, Mandal N, Majumder S, Das RK, Sengupta S, Banerjee P, Ray AK, RoyChaudhuri C, and Chatterjee J
- Subjects
- Cadherins metabolism, Cell Culture Techniques, Cell Line, Cell Movement, Cell Survival, Glucuronic Acid chemistry, Hexuronic Acids chemistry, Humans, Keratinocytes cytology, Ki-67 Antigen metabolism, Membrane Proteins metabolism, Models, Biological, Re-Epithelialization, Wound Healing, Alginates chemistry, Honey
- Abstract
Re-epithelialization is one of the most important stages of cutaneous regeneration and its success requires supportive micro-ambience which may be provided with suitable bio-matrix. Biocompatibility and efficacy of such bio-matrix in re-epithelialization could be explored by multimodal analysis of structural and functional attributes of in vitro wound healing model including evaluation of prime molecular expressions of the epithelial cells during repair. Present study examines the influence of honey-alginate and alginate matrices on re-epithelialization in keratinocyte (HaCaT) population in a 2-D wound model. Cellular viability, proliferation and cell-cell adhesion status were assessed during wound closure using live/dead cell assay and by evaluating expressions of Ki67, p63 and E-cadherin along-with % change in cellular electrical impedance. Efficacy of honey-alginate matrix in comparison to only alginate one was demonstrated by a quicker reduction in wound gap, improved cellular viability, enhanced expressions of Ki67, p63 and its isoforms (TAp63, ΔNp63) as well as E-cadherin. Faster restoration of electrical attribute (% of impedance change) after wounding also indicated better impact of honey-alginate matrix in re-epithelialization., (Copyright © 2013 Elsevier B.V. All rights reserved.)
- Published
- 2013
- Full Text
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62. A note on the basis of differentiation of cholera and eltor vibrios.
- Author
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Chatterjee SN, Adhikari PC, Das J, Maiti M, Roychaudhuri C, Sur P, and Datta MC
- Subjects
- Bacteriophages, Edetic Acid pharmacology, Electrophoresis, Polyacrylamide Gel, Microbial Sensitivity Tests, Microscopy, Electron, Phosphorus Isotopes, Vibrio cytology, Vibrio drug effects, Vibrio classification
- Published
- 1971
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