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New data on the expansion of the Eurasian Thick-knee Burhinus oedicnemus in Sicily. A consideration of citizen science.In this work, we collected records of Eurasian Thick-knee observa-tions in Sicily by using scientific literature, citizen science programs, and social networks as data sources. The aims of this work is creat-ing a complete and up-to-date dataset, which also includes the authors’ targeted research in the field. As compared with records previously reported in literature, the data collected here, which cover the last fif-teen years, show a clear expansion trend for the Eurasian Thick-kneein Sicily. About one third of these new records come from Facebook groups dedicated to biodiversity, thus underlining the usefulness of unconventional sources to gather data on species with poorly known distributions.

Marine species represent a rich source of biologically active products that can be used in various fields. Among them, marine algae produce numerous secondary metabolites responsible for different biological activities such as: immunomodulatory [1], antioxidant [2], and antimicrobial [3]. The aim of this study was chemically characterizing the extracts of three macroalgae species: Carpodesmia crinite (Duby) Orellana & Sansón, 2019, Carpodesmia brachycarpa (J. Agardh) Orellana & Sansón 2019, Asparagopsis taxiformis (Delile) Trevisan 1845 and evaluate their biological activities. The characterization of the secondary metabolites was performed by HPLC-MS and the results obtained showed higher meroterpenoids levels. Moreover, the extracts tested against the Arbacia lixula sea urchin modulate the total and differential cellular count demonstrating their involvement in immunity responses. Furthermore, important antimicrobial activities were observed by testing these extracts against the bacterial strains Listeria monocytogenes and Staphylococcus aureus. For the first time our study shows the effects of macroalgae extracts on the immunomodulatory activity in Arbacia lixula sea urchin and important antimicrobial activity. The results obtained, although preliminary, are certainly encouraging and our purpose is also improved this information performing biochemical and molecular assays of extracts obtained to understand better the potential that these metabolites have towards the sea urchin Arbacia lixula that graze on these macroalga.

Siciliaria septemplicata (R.A. Philippi, 1836) (Gastropoda Clausiliidae) endemic from northwestern Sicily (Italy) is revised, using shell and genital characters. The diversity of the species complex, the taxonomic history, faunal data and distributional relationships are examined. Siciliaria septemplicata vincentii n. ssp. and S. septemplicata mariastellae n. ssp. from the surroundings of Palermo are here described

Innovative technological approaches are crucial to enhance naturalistic museum collections and develop information repositories of relevant interest to science, such as threatened animal taxa. In this context, museomics is an emerging discipline that provides a novel approach to the enhancement and exploitation of these collections. In the present study, the discovery of a neglected lion skeleton in the Museum of Zoology “Pietro Doderlein” of the University of Palermo (Italy) offered the opportunity to undertake a multidisciplinary project. The aims of the study consisted of the following: (i) adding useful information for museographic strategies, (ii) obtaining a new genetic data repository from a vulnerable species, (iii) strengthening public awareness of wildlife conservation, and (iv) sharing new learning material. The remains of the lion were examined with a preliminary osteological survey, then they were restored by means of 3D printing of missing skeletal fragments. Phylogenetic analyses based on cytochrome b sequence clearly indicate that the specimen belongs to the Central Africa mitochondrial clade. At the end of the study, the complete and restored skeleton was exhibited, along with all of the information and data available from this project. This study shows a useful approach for the restoration and enhancement of a museum specimen, with important opportunities for preserving biodiversity and driving specific conservation policies, but also for providing Life Science learning material.

The pond slider Trachemys scripta is one of the most widespread alien turtle species in the world. Its unregulated trade and the consequent uncontrolled releases into the wild led to negative impacts on the native turtles of the invaded areas. In Italy, alien pond sliders are widely spread, and the occurrence of hatchlings and well-established populations is known in some areas. However, to date in Sicily, only a single female of Trachemys scripta laying eggs was reported. Besides that, nothing is known about the actual reproduction success and establishment of self-sustaining T. scripta populations in Sicily. Therefore, based on 14 previously characterised highly polymorphic microsatellite loci, we aimed to unravel if the alien turtles successfully reproduce in Sicily, in both natural and semi-natural areas (i.e., lake “Biviere di Gela” and “Parco d’Orléans”, respectively). Our results show a clear structuring of the two studied populations. Several full-sibling relationships between the sampled turtles were found, suggesting actual reproduction in the wild of the pond sliders in Sicily. However, further sampling is desirable since no parent-offspring relationships were observed in the studied populations. Due to our results, systematic monitoring of alien pond sliders in the whole of Sicily is crucial for better planning of mitigation strategies in order to protect the native biota of Sicilian inland waters.

The first studies on the micro-organisms inhabiting Sicilian inland waters date back to the middle of the XIX century. However, these were based on single samples and mainly addressed at compiling faunistic and floristic inventories. It was in the first decades of the XX century that the first methodical studies were performed, which focussed on assessing microbial diversity in saline and hypersaline inland waters. Studies on plankton dynamics in ponds and reservoirs of the island started at the beginning of the 1980s and, since the end of the 1990s, temporary waters have also been intensively sampled, especially as regards phytoplankton and micro-crustaceans. These intensified sampling efforts contributed to increasing our knowledge of the composition, structure and functioning of the planktic compartment. On the contrary, studies on benthic microflora and fauna are still numerically scarce and mostly based on occasional collections. Also, running waters have received little attention and the methodical analysis of their micro-organisms is still in its infancy.

Citizen science can represent an effective tool for large- scale data collection and can be used to improve scientific knowledge and define species distribution ranges before proper planning of related conservation strategies. A regional census of wintering Booted Eagle Hieraaetus pennatus in Sicily, never achieved before, was organized by GAM (Gruppo Aquila Minore - Booted Eagle Group) on 12 Janu- ary 2020, involving 90 people from several organizations. A total of 112 wintering individuals have been recorded for the whole region, col- lecting related data about their colour morph, habitat preference and altitude. A regional estimate of 180-220 wintering individuals was cal- culated, also considering previous data collected during counts carried out in some selected sample areas during December 2019 and January 2020.

This short note reports the curious breeding, in terms of nest features, of several Sparrows mainly showing the phenotype of the Spanish Sparrow or Passer prope hispaniolensis, though, few males exhibited less barred flanks as for the Passer italiae. This is in agre- ement with the ambiguous taxonomy of Sparrows of Sicily that is emerged over the past 150 years. As matter of fact, the taxonomic classification of the Sicilian sparrow spans from Passer hispaniolen- sis to Passer italiae and includes hybrid species in between. Massa et al (2022) propose to name these populations Passer italiae x hispa- niolensis. Here, for the first time, the curious nesting of Passer prope hispa- niolensis on Ligurian fishing boats (gozzi) moored at Margi Spanò near Petrosino (western Sicily) is reported and discussed. Such behavior has been already observed for aquatic species belonging to the families of Anatidae, Sulidae and Rallidae, but it represents unusual behavior for Passeriformes. It is worth noting that, among the observed individuals, at least 12 pairs of Sparrow used five different moored boats as nesting sites. Nest predation has a strong impact on the reproductive success of birds. The choice of nesting on boats might represent a strategy the sparrow intentionally adopted to increase their fledging and, hence, sur- vival rate.

The macrofauna in the intertidal zone of sandy beaches provides the trophic connectivity between land and sea, by linking microbiome, meiofauna, and megafauna, representing a food source for several terrestrial animals, including shorebirds and mammals. However, the macrozoobenthos in urbanised beaches is subjected to intense disturbances, such as breakwater barriers and tourism, which limit or impede the energy transfer from the marine to the terrestrial habitats. Because the information about diversity and abundance of the macrozoobenthos of the intertidal zone on the Mediterranean sandy coasts is scant, the main objective of this study is to increase the knowledge on the macrofauna living in this habitat and to identify taxa sensitive to cumulative human-induced stresses. To achieve this purpose, the structure and dynamics of macrozoobenthic communities from (1) a highly frequented beach characterized by breakwater barriers and (2) a marine protected area (MPA) in the Adriatic Sea were compared. The hypotheses that macrofauna composition and abundance changed in the two sites and over time were tested. Results highlighted that the macrozoobenthos in the MPA is mainly dominated by juvenile bivalves, which peaked from autumn to winter, and to a lesser extent by ostracods and mysids. Conversely, ostracods and the bivalve Lentidium mediterraneum (O. G. Costa, 1830) are particularly abundant in the highly disturbed beach, while the gastropod Tritia neritea (Linnaeus, 1758) increased only during summer. A possible combined effect of breakwater barriers and intense trampling has been theorized to explain the main differences between the two sites especially in the summer.

In 2021, the Museum of Zoology “P. Doderlein” of the University of Palermo acquired a new specimen, the complete skeleton of Stenella coeruleoalba, a striped dolphin stranded in 2018 in Marinella di Selinunte, Castelvetrano (Sicily, Southern Italy). The project herein described is the result of a collaboration among the Bio-Reconstruction Laboratory of the IAS-CNR of Capo Granitola, the IZS of Palermo, the company Naturaliter and the Museum of Zoology “P. Doderlein”. In Natural History Museums, cetaceans are an excellent tool to facilitate scientific dissemination aimed at the conservation of marine biodiversity. The work herein described is presented as an example of good practices in recovering a cetacean carcass that can otherwise be an expensive waste to manage.

Guaranteeing a high quality of life for animals has recently become a matter of increasing concern. Welfare assessment has been well-developed for terrestrial species, mainly for those kept in captivity, but the current state of the art is less well-characterized for aquatic animals. The classical methodologies utilised to date, such as the kind of behavioural observation widely used for terrestrial animals, are not appropriate for improving our knowledge of the well-being of aquatic animals if used alone, mainly due to the large number of species and the difficulty of obtaining comparative results among the different taxa of interest. Among different approaches, the evaluation of internal responses inside organisms can be carried out using different physiological and biochemical tools. This thesis presents methodologies and results of studies aimed at validating physiological and immunity parameters as markers of stress in the evaluation of fish welfare, with a particular focus on two important species in aquaculture, Sparus aurata and Dicentrarchus labrax. Fish were exposed to different conditions, and their welfare status was evaluated. An approach based on physiological markers was introduced to investigate the effects of the surgical implantation of electronic tags to provide telemetry for aquaculture study purposes. Indeed, the use of telemetry to study aquatic organisms has developed rapidly and its utilization needs to be better understood. Nutrition and food quality are further critical aspects for farmed animals. Indeed, aquaculture, both conventional and organic, has increased widely in recent years and has attracted the attention of various stakeholders. Physiological stress indicators, growth performance, and swimming activity data obtained by acoustic transmitters are good indicators for welfare assessment, and here they have been used to evaluate the effect of different aquaculture methodologies, in particular on fish fed with different diets. In addition, social stress and territoriality are relevant factors to evaluate for gregarious species that may have consequences on animals farmed in captivity conditions. These aspects may impair the ability of fish to respond to various stimuli, such as pathogens and environmental variations, with negative influences. In this thesis, we evaluate the effects of social stress on gilthead bream through behavioural observation supported by the evaluation of physiological and immunological-cellular parameters, such as cortisol, glucose, lactate, osmolarity, and phagocytosis.

Habitat mapping, physical characteristics and benthic community of a rhodolith bed in the Pelagie Islands (Strait of Sicily, Mediterranean Sea) were studied through Multi–Beam Echo–Sounder (MBES), Remotely Operated Vehicle (ROV) and grab samples. The geomorphological analysis revealed an articulated and wide rhodolith bed; video inspections highlighted a bed with high coverage, few sandy patches and with a prevalence of the boxwork morphotype. A total of 207 taxa with 876 specimens were identified, and Polychaeta was the dominant taxon. Linguimaera caesaris, a Lessepsian benthic amphipod, was recorded in all sampling sites, and its presence represents an input to deepen the benthic assemblage research on the rhodolith bed. In terms of morphotype composition, dead/live ratio and species variability, the bed variability indicated a good status of health, although trawling signs were detected through ROV videos. The present study broadens the knowledge on Mediterranean rhodolith beds and supports the importance of survey and monitoring activities for the conservation and management of this important habitat.

During the summer of 2022, an extensive die-off of Dendropoma cristatum and other marine organisms associated with vermetid reefs was observed in the western Mediterranean Sea (northern coast of Sicily). Quantitative data from more than 300 km of coastal stripe indicated that the percentage of dead D. cristatum specimens, showing empty and/or transversely fractured shells, ranged from 64 to 84 % in populations having a density of 2900-4730 ind./m2, suggesting that millions of organisms had recently died along the Sicilian coast. This high mortality range coincided with prolonged desiccation events during which biogenic vermetid reefs were exposed to extreme warm-air conditions for several consecutive days. This warning report about neglected shallow vermetid reefs raises concern regarding the loss of Mediterranean biodiversity, underlining the need to develop and implement monitoring and conservation efforts on a basin-wide scale.

The genus Myzocallis Passerini (Hemiptera, Aphididae, Calaphidinae, Myzocallidini) is a rather primitive group of aphids currently comprising 45 species and 3 subspecies, subdivided into ten subgenera, three of them having a West Palaearctic distribution. The majority of the species inhabit Fagales plants and some of them are considered pests. Despite their ecological interest and the presence of some taxonomic controversies, there are only a few molecular studies on the group. Here, the main aims were to develop a DNA barcodes library for the molecular identification of West Palaearctic Myzocallis species, to evaluate the congruence among their morphological, ecological and DNA-based delimitation, and verify the congruence of the subgeneric subdivision presently adopted by comparing the results with those obtained for other Panaphidini species. These study findings indicate that Myzocallis (Agrioaphis) leclanti, originally described as a subspecies of M. (A.) castanicola and M. (M.) schreiberi, considered as a subspecies of M. (M.) boerneri, should be regarded at a rank of full species, and the subgenera Agrioaphis, Lineomyzocallis, Neomyzocallis, Pasekia were elevated to the rank of genus, while Myzocallis remain as such.

This editorial is aimed at explaining why the editors of Hydrobiologia are so concerned with biological nomenclature and why we ask our authors the utmost precision when referring to species in their papers... In these lines, we want to show that this is not just an old fashion formalism, but a necessity to correctly and univocally identify the biological subjects that are the basis of the research published in ecology-related journals.

We describe a new harpacticoid, Stammericaris remotaepatriae sp. nov., collected from the hyporheic habitat of a stream in Nantucket, MA, USA. The new species is characterized by the size of the caudal rami of both sexes, which are shorter than the anal somite, by the morphology and armature of the P3 and, mainly, by the P4 endopod of males, represented by a curved plate with a strongly bifid tip, the distal proximal outgrowth of the distal margin spiniform and denticled, the proximal outgrowth missing. The study of the new species allowed us to review the systematic position of Parastenocaris palmerae Reid, 1992, which we transferred to Stammericaris Jakobi, 1972 as Stammericaris palmerae (Reid, 1992) comb. nov., based mainly on the structure of the male P4 endopod complex and the setation of the caudal rami. We also discussed the taxonomic position and affinities of Parastenocaris trichelata Reid, 1955, suggesting that this species is related to the two former ones for a set of diagnostic features, but can not be attributed to the genus due to the peculiar morphology of the male P4 endopod complex; P. trichelata is therefore considered species inquirenda. We also discussed Parastenocaris sp. 1 and Parastenocaris sp. 3, two taxa only partially described and drawn in Strayer (1988). In fact, Parastenocaris sp. 1 can be related to Stammericaris and might represent a third species of the genus in the Nearctic region. Remarkably, the structure of the male P4 endopod of Parastenocaris sp. 3 is typical of Proserpinicaris Jakobi, 1972; this hypothetical assignment of the species to Proserpinicaris, if confirmed, would be of relevant taxonomic and biogeographic value. Finally, we provide an updated distribution map of the genus Stammericaris and brief remarks on the faunistic and ecological characteristics of the taxa presented and discussed in this paper.

The Atlantic blue crab Callinectes sapidus Rathbun, 1896 is included among the worst invasive alien species in the Mediterranean Sea. Here, we report the finding of the species in two Sicilian rivers, the Irminio and the Imera Meridionale, where it was collected up to 6 km from the river mouths. Although several records of the species are already available from Italy, this is the first evidence of the occurrence of this invasive crab so far from the coastline in the whole country. In the light of the well-known impact of the Atlantic blue crab on the invaded water bodies, the monitoring of the species and appropriate mitigation strategies should be implemented in order to protect the threatened native biota of Sicilian inland waters.

In insects, the cell-mediated immune response involves an active role of hemocytes in phagocytosis, nodulation, and encapsulation. Although these processes have been well documented in multiple species belonging to different insect orders, information concerning the immune response, particularly the hemocyte types and their specific function in the black soldier fly Hermetia illucens, is still limited. This is a serious gap in knowledge given the high economic relevance of H. illucens larvae in waste management strategies and considering that the saprophagous feeding habits of this dipteran species have likely shaped its immune system to efficiently respond to infections. The present study represents the first detailed characterization of black soldier fly hemocytes and provides new insights into the cell-mediated immune response of this insect. In particular, in addition to prohemocytes, we identified five hemocyte types that mount the immune response in the larva, and analyzed their behavior, role, and morphofunctional changes in response to bacterial infection and injection of chromatographic beads. Our results demonstrate that the circulating phagocytes in black soldier fly larvae are plasmatocytes. These cells also take part in nodulation and encapsulation with granulocytes and lamellocyte-like cells, developing a starting core for nodule/capsule formation to remove/encapsulate large bacterial aggregates/pathogens from the hemolymph, respectively. These processes are supported by the release of melanin precursors from crystal cells and likely by mobilizing nutrient reserves in newly circulating adipohemocytes, which could thus trophically support other hemocytes during the immune response. Finally, the regulation of the cell-mediated immune response by eicosanoids was investigated.

Aim Understanding the drivers of species distribution ranges and population genetic structure can help predict species' responses to global change, while mitigating threats to biodiversity through effective conservation measures. Here, we combined species habitat suitability through time with process-based models and genomic data to investigate the role of landscape features and functional connectivity in shaping the population genetic structure of Northern chamois. Location European Alps. Taxon Northern chamois (Rupicapra rupicapra). Methods Using a model that simulates dispersal and tracks the functional connectivity of populations over dynamic landscapes, we modelled the response of the chamois to climate change from the last glaciation (20,000 years ago) to the present. We reconstructed species habitat suitability and landscape connectivity over time and simulated cumulative divergence of populations as a proxy for genetic differentiation. We then compared simulated divergence with the actual population structure of 449 chamois (with >20 k SNPs) sampled across the Alps. Results We found that Alpine populations of chamois are structured into two main clades, located in the south-western and the eastern Alps. The contact zone between the two lineages is located near the Rhone valley in Switzerland. Simulations reproduced the geographic differentiation of populations observed in the genomic data, and limited dispersal ability and landscape connectivity co-determined the fit of the simulations to data. Main conclusions The contemporary genetic structure of the chamois across the Alps is explained by limited functional connectivity in combination with large rivers or valleys acting as dispersal barriers. The results of our analysis combining simulations with population genomics highlight how biological characteristics, habitat preference and landscapes shape population genetic structure over time and in responses to climate change. We conclude that spatial simulations could be used to improve our understanding of how landscape dynamics, shaped by geological or climatic forces, impact intra- and interspecific diversity., Journal of Biogeography, 49 (10), ISSN:0305-0270, ISSN:1365-2699

Based on the critical review of the literature published in the last 22 years, an attempt was made to evaluate the current knowledge gap on the distribution and status of the native Testudines taxa occurring in Sicily (namely Caretta caretta, Emys trinacris, and Testudo hermanni hermanni), as well as the available knowledge of the only non-native species with putative viable populations occurring on the island, i.e., Trachemys scripta. Summarizing the current information, all of the Testudines species occurring in Sicily showed a fragmented and incompletely-known distribution, and only scarce data are available about their phenology. Moreover, despite their inclusion of international and national laws (Bern Convention, CITES, Habitat directive), all three native species are facing several threats (e.g., habitat alteration, the occurrence of invasive species, parasite spillover) leading to a reduction of their populations on the island. Future monitoring programs on the island should be enhanced, with an emphasis on those taxa in decline. Moreover, involve Citizen Science programs should also be implemented in order to increase the awareness of non-experts and facilitate the monitoring task.

No molecular data are currently available for the Sicilian populations of the European pine marten Martes martes, thus preventing any sound inference about its native or non-native status on the island, as well as the local phylogeography of the species. In order to investigate these issues, we sequenced two mtDNA markers in road-killed specimens collected in Sicily. Both markers consistently demonstrated the existence of a well-characterised Sicilian clade of the species, which is endemic to the island and constitutes the sister group of a clade including the Mediterranean and Central–North European major phylogroups of the European pine marten. Such evidence supports the autochthony of Martes martes in Sicily and points to a natural Pleistocene colonisation of the island followed by isolation. The occurrence of a, to date undetected, major phylogroup of the species in Sicily calls for the dedicated monitoring of the Sicilian populations of the species in order to preserve this evolutionarily significant unit.

Al giorno d’oggi le meduse, e il plancton gelatinoso in generale, non possono più essere considerati personaggi secondari come accaduto in passato, è sempre più evidente che questi organismi giocano un ruolo chiave negli ecosistemi con numerosi collegamenti nella rete trofica. Con questo dottorato, l’obiettivo è stato investigare le dinamiche tra il plancton gelatinoso e una particolare sottoclasse di parassiti, i Digenea, per determinare il ruolo delle meduse (ospite intermedio) come link o trasmettitore di questi parassiti dal comparto bentonico (gasteropode, primo ospite) a quello pelagico (pesci, ospiti definitivi). Ancora più cruciale se consideriamo il notevole aumento di bloom negli ultimi decenni. L’aumento di numero e biomassa di meduse potrebbe andare a favorire la trasmissione di questi parassiti ai livelli più alti delle reti trofiche. Questo potrebbe portare a un aumento del numero di parassiti nei pesci e nei gasteropodi, con imprevedibili effetti sul loro metabolismo, ed a un generale aumento di questi parassiti negli ecosistemi. Questa tesi mira anche a sfruttare questi nuovi dati parassitologici come uno strumento per meglio determinare la posizione delle meduse negli ecosistemi e le interazioni tra pesci e plancton gelatinoso (la predazione pesce-medusa è fondamentale per i digenei per chiudere il proprio ciclo vitale), integrando altri studi basati sui metodi tradizionali di ecologia trofica. La parte centrale del PhD, incentrata sull’investigare per la prima volta le dinamiche di questi parassiti nel plancton gelatinoso del golfo di Trieste, ha mostrato che ogni specie del plancton gelatinoso è risultata essere ospite di parassiti digenei, a prescindere dal luogo e periodo di campionamento. La maggioranza di parassiti è risultata appartenere al genere Clavogalea, una prima descrizione per questo genere nelle meduse e prima osservazione di questo parassita nel mar Mediterraneo. Il secondo genere trovato, Opechona, è già stato descritto in meduse ma mai nel Mediterraneo. L’alta prevalenza di parassiti registrata in ogni specie (>80%) nel golfo di Trieste suggerisce che il plancton gelatinoso è un importante secondo ospite intermedio per digenei lepocreadidi e gioca quindi un ruolo importante per i loro cicli vitali nell’area investigata. I nostri risultati supportano anche l’ipotesi che queste specie gelatinose siano una parte importante della dieta dei pesci, ospiti definitivi dei lepocreadidi, in quanto il trasferimento trofico è necessario per questi parassiti per chiudere il loro ciclo vitale. Il progetto sui parassiti di pesci, finalizzato a identificare gli ospiti definitivi di queste due specie di digenei, ha per ora dato esito negativo per quanto riguarda Clavogalea, lasciando il ciclo vitale di questi organismi ancora indefinito. Individui del genere Opechona sono invece stati trovati in Scomber scombrus ma le basse intensità riscontrate in Aequorea forskalea rendono difficile teorizzare una relazione trofica stabile tra queste due specie. Allo stesso tempo, l’assenza di esemplari adulti di Clavogalea sp. (molto più abbondanti di Opechona sp. in Aequorea forskalea) negli sgombri suggeriscono che questo pesce ha ottenuto tali digenei da un altro secondo ospite intermedio. In ultimo, durante questo PhD, l’anatomia morfologica e funzionale del sistema gastrovascolare di Rhizostoma pulmo (Macri 1778) è stata investigata tramite la creazione e l’utilizzo di un inedito protocollo con tecniche innovative mai adottate nella ricerca su meduse: endocast in resina e analisi microtomografica 3D a raggi X. Concludendo, questo lavoro è stato un primo passo verso il completare il quadro riguardante i parassiti di meduse e l’ecologia di queste ultime nel nord Adriatico, investigando e facendo luce sul grande buco di conoscenza riguardo questi argomenti e, al tempo stesso, aprendo numerosi punti interrogativi che necessitano di essere affrontati. Nowadays, jellyfish can not be considered secondary characters as happened in the past. It is more and more evident that gelatinous zooplankton play a major role in the ecosystems with numerous links in the food webs. With this thesis, we aimed at addressing the dynamics between gelatinous zooplankton and a peculiar subclass of parasites, the Digenea, crucial to determine the role of jellyfish (intermediate host) as a link or transmitter of these parasites from the benthic compartment (gastropods, first host) to the pelagic compartment (fish, definitive hosts). Even more crucial if we consider the noticeable increase of blooms in the last decades. The increase in number and biomass of jellyfish could favor the transmission of these parasites to the upper levels of the trophic webs. Potentially, this could lead to a higher number of digenean parasites in fish and gastropods, with still uncharted effects on their physiology, and an overall increase of these parasites in the ecosystems. Simultaneously, few information on fish-jellyfish feeding interactions is available at the current state of the art. This thesis aimed at exploiting its brand-new parasitological data about jellyfish digeneans as a useful tool to better estimate the trophic position of jellyfish in the ecosystems and the interactions between fish and gelatinous organisms in the area (feeding on jellyfish is needed for Digenea to close their life cycle), potentially providing new hints and integrating other studies based on trophic ecology traditional methods (gut contents and stable isotopes analysis of fish). The core part of the PhD, focusing on investigating for the first time the dynamics of these parasites in the gelatinous zooplankton of the Gulf of Trieste, showed that every gelatinous zooplankton species resulted to be host to digenean parasites despite sampling location and month. The majority of parasites belonged to the genus Clavogalea, a first record for this genus in jellyfish, and a first record in the Mediterranean Sea. The second genus found, Opechona, has already been observed in jellyfish, but never in the Mediterranean Sea. The high prevalence of parasites recorded in every species (>80%) in the Gulf of Trieste, suggests that the gelatinous zooplankton is an important second intermediate host for lepocreadiid digeneans and therefore plays a key role in their life cycle in the investigated area. Our findings also support the hypothesis that these gelatinous species are an important part in the diet of teleost fish, which are reported as definitive hosts of lepocreadiids, since trophic transmission is necessary for these parasites to complete their life cycles. The project on fish parasites, aimed to find the definitive hosts of these two digenean species, did not record any Clavogalea, leaving the life cycle of this organisms still unclear. Opechona sp. individuals have been found in Scomber scombrus but the intensities recorded in Aequorea forskalea were so low that it would be hard to theorize a stable trophic relation between Scomber scombrus and the hydromedusa. At the same time, the absence of Clavogalea sp. (much more abundant in Aequorea forskalea. compared to Opechona sp.) in Scomber scombrus would suggest that the fish got the parasites from another intermediate host. Last, during this PhD, morphological and functional anatomy of the gastrovascular system of Rhizostoma pulmo (Macri 1778) was investigated in detail by using a brand-new protocol (created by us), involving innovative techniques never adopted in jellyfish science: resin endocasts and 3D X-ray computed microtomography. Concluding, this work has been a first step in jellyfish parasitology and jellyfish ecology in the north Adriatic since it started investigating and shedding light on the huge hole of knowledge about this topic and opened numerous questions that still need to be addressed.

In this thesis RNA-sequencing tools are applied on some representatives of the antarctic trophic chain exposed to a non lethal temperature increase, as to understand and model their response to the increase in temperature expected to happen in this decade, in order to extend eventual functional conclusions to other temperate stenotherm organisms such as those living at extreme depths. RNA-sequencing consists in a set of powerful and sensible tools that allow qualitative and quantitative measurements in gene expression, pairing molecular analyses with state-of-the-art statistics and computer science. The aforementioned sensitivity, in synergy with a proper experimental design, allowed studying not only the response to a temperature increase, but also to the experimental condition itself (i.e. stabling of wild animals in tanks). The notothenioid fish Trematomus bernacchii (from which muscle, gills and brain were sampled), the scallop Adamussium colbecki (from which gills, mantle and digestive gland were sampled), the amphipod Pseudorchomene plebs and the tardigrade Acutuncus antarcticus are the models of choice of this work. In particular T. bernacchii was the most responsive of the bunch, specially in the brain tissues, where the temperature (+1.5°C increase) induced upregulation of genes involved in immune response and inflammatory state after 7 days of exposure. After 20 days of heat exposure many pathways related to synapse function and structure were altered, suggesting an on-going profound alterations in the tissue, which may also be the result of the combined effect of heat and the impossibility to avoid it in captivity. Even more profound effects were observed in the response to time in experimental tanks, as an important shift in gene expression was observed in the brain, suggesting profound changes in the neural pathways, including those involved in specific stress perception. The scallop A. colbecki did not show significant change in gene expression patterns in response to heat, but a small change was observed in the digestive gland after 20 days of experimental captivity, showing alterations in genes whose functions are mainly involved in feeding ability. Samples from the amphipod P. plebs were challenging to prepare and to analyze, as many were lost due to unfreezing during transport. Moreover the presence of a bycatch of Eusirus cf. giganteus juvenile and an high degree of parasitism from a dinoflagellate of the genus Hematodinium in all samples made it impossible to study the response of the amphipod to a warmer environment. Nevertheless, the transcriptomic data allowed the identification of an high expression of hemocyanin in E. giganteus suggesting a possible cold adaptation trait, the classification of our samples as a Orchomenid cryptic species, and the first identification of active Hematodinium parasitism in the antarctic ocean. Finally the tardigrade A. antarcticus displayed a striking sample variability, that may underlie an never described genomic variability and/or an high level of heterozygosity. This fact reduced the number of samples in the differential expression analysis, which nevertheless showed a response to short term exposure to heat with a pattern proportional to temperature in terms of fold changes of gene expression levels. The differentially expressed genes suggested that mitochondrial oxidative metabolism increased and hinted the activation of pathways related to resistance forms typical of the Tardigrada phylum. Such a response was not observed in a long term exposure to the higher temperatures, suggesting that the changes observed in short term are compensatory. ​

To date, drugs released into the aquatic environment are a real problem, and among antibiotics, sulfamethoxazole is the one most widely found in wastewater; thus, the evaluation of its toxicity on marine organisms is very important. This study, for the first time, investigates the in vitro effects of 4 concentrations of sulfamethoxazole (0.05 mg/L, 0.5 mg/L, 5 mg/L, 50 mg/L) on the fertilization and development of the sea urchin Arbacia lixula. The gametes were exposed to drugs in three different stages: simultaneously with, prior to, and post-fertilization. The results show a significant reduction in the percentage of fertilized oocytes at the highest drug concentrations. Moreover, an increase in anomalies and delays in embryo development following the treatment with the drug was demonstrated. Therefore, the data suggest that this antibiotic can alter the development of marine organisms, making it urgent to act to reduce their release and to determine the concentration range with the greatest impact.

Many global and European commitments state the need to plant billions of trees and restore millions of hectares of degraded ecosystems to contrast biodiversity loss, desertification and climate change. Seed dispersal is a crucial process promoting vegetation dynamics, and in the Mediterranean, up to 65% of woody plant species need animals for seed dispersal. Therefore, such mutualistic ecological interaction represents a key nature-based solution to help us reaching our commitments. In this presentation first we will report the strong expansion rate and correlated finescale spatio-temporal patterns of woody natural regeneration over a pastureland, using a spatially-explicit framework deployed over 30 ha inside the last large forest remnant in western Sicily, Italy. Then we will quantitatively demonstrate the key and complementary seed dispersal services promoted by birds, wild mammals and cattle across three different habitats, revealing the structure, specialization and modularity of the trophic and spatial seed dispersal networks. Finally, we will discuss the effects of human-made habitat heterogeneity and climate change on animal seed dispersal services and explore some strategies to take advantage of such services to promote ecological restoration of natural habitats as well as to increase biodiversity in agroecosystems.

Biodiversity underlies ecosystem resilience, ecosystem function, sustainable economies, and human well-being. Understanding how biodiversity sustains ecosystems under anthropogenic stressors and global environmental change will require new ways of deriving and applying biodiversity data. A major challenge is that biodiversity data and knowledge are scattered, biased, collected with numerous methods, and stored in inconsistent ways. The Group on Earth Observations Biodiversity Observation Network (GEO BON) has developed the Essential Biodiversity Variables (EBVs) as fundamental metrics to help aggregate, harmonize, and interpret biodiversity observation data from diverse sources. Mapping and analyzing EBVs can help to evaluate how aspects of biodiversity are distributed geographically and how they change over time. EBVs are also intended to serve as inputs and validation to forecast the status and trends of biodiversity, and to support policy and decision making. Here, we assess the feasibility of implementing Genetic Composition EBVs (Genetic EBVs), which are metrics of within-species genetic variation. We review and bring together numerous areas of the field of genetics and evaluate how each contributes to global and regional genetic biodiversity monitoring with respect to theory, sampling logistics, metadata, archiving, data aggregation, modeling, and technological advances. We propose four Genetic EBVs: (i) Genetic Diversity; (ii) Genetic Differentiation; (iii) Inbreeding; and (iv) Effective Population Size (Ne ). We rank Genetic EBVs according to their relevance, sensitivity to change, generalizability, scalability, feasibility and data availability. We outline the workflow for generating genetic data underlying the Genetic EBVs, and review advances and needs in archiving genetic composition data and metadata. We discuss how Genetic EBVs can be operationalized by visualizing EBVs in space and time across species and by forecasting Genetic EBVs beyond current observations using various modeling approaches. Our review then explores challenges of aggregation, standardization, and costs of operationalizing the Genetic EBVs, as well as future directions and opportunities to maximize their uptake globally in research and policy. The collection, annotation, and availability of genetic data has made major advances in the past decade, each of which contributes to the practical and standardized framework for large-scale genetic observation reporting. Rapid advances in DNA sequencing technology present new opportunities, but also challenges for operationalizing Genetic EBVs for biodiversity monitoring regionally and globally. With these advances, genetic composition monitoring is starting to be integrated into global conservation policy, which can help support the foundation of all biodiversity and species' long-term persistence in the face of environmental change. We conclude with a summary of concrete steps for researchers and policy makers for advancing operationalization of Genetic EBVs. The technical and analytical foundations of Genetic EBVs are well developed, and conservation practitioners should anticipate their increasing application as efforts emerge to scale up genetic biodiversity monitoring regionally and globally. ispartof: BIOLOGICAL REVIEWS vol:97 issue:4 pages:1511-1538 ispartof: location:England status: published

Sound is the most effective means of communication in marine and freshwater ecosystems. However, no data about acoustic emissions from non-malacostracan crustaceans are currently available, so their ability to produce sounds is unknown. For the first time, this study investigated the sound produced by 2 tadpole shrimp species,Triops cancriformisandLepidurus lubbocki.L. lubbockiindividuals were collected from a natural temporary pond in Sicily (Italy), whereasT. cancriformisindividuals were obtained from eggs contained in sediment from a rock pool in Sardinia (Italy). In the laboratory, experimental tanks with the animals (one species at a time) were acoustically monitored. Both species produced high-frequency, wideband pulses distinguishable by their sound pressure level, which was higher inL. lubbocki(146 dB) than inT. cancriformis(130 dB), and by their first and second peak frequencies, which were higher inL. lubbocki(65 and 86 kHz) than inT. cancriformis(63 and 71 kHz). The energy distributions in the power density spectra showed different shapes, as revealed by the 3 dB bandwidth and centre frequency. The pulse durations were 88 and 97 µs inL. lubbockiandT. cancriformis, respectively.L. lubbockipresented a higher emission rate thanT. cancriformisand a marked circadian pattern, with a higher abundance of sounds during the night. This study reports the first evidence of sound emissions from non-malacostracan crustaceans and reveals the high potential of passive acoustic monitoring to detect the presence, abundance, and life cycle of these elusive keystone species of temporary water bodies.

Pentraxins (PTXs) are a superfamily of conserved proteins which are components of the humoral arm of innate immunity. They are considered to be functional ancestors of antibodies and are classified into short and long types. In this study, we show that a pentraxin-like component (Ptx-like) with a C-terminal PTX domain, highly homologous to the short PTX of H. sapiens CRP, and a long N-terminal domain typical of long PTXs, is involved in the inflammatory response of Ciona robusta under LPS exposure in vivo. Analyses of protein domains as well as 3D modelling and phylogenetic tree supported the close relationship of Ptx-like with mammalian CRP, suggesting that C. robusta Ptx-like shares a common ancestor in the chordate lineages. qRT-PCR analysis showed that Ptx-like was transcriptionally upregulated during the inflammatory process induced by LPS inoculation and that it is involved in the initial phase as well as the secondary phase of the inflammatory response in which matrix remodelling and the achievement of homeostasis occur. In situ hybridisation assays revealed that gene transcription was upregulated in the pharynx post-LPS challenge in vivo, and that Ptx-like was expressed by clusters of haemocytes, mainly granulocytes, inside the pharynx vessels. We also found transcript-expressing granulocytes flowing in the musculature and in the lacunae of the circulatory system. These data supported that Ptx-like is a potential molecule of the acute-phase response in C. robusta immune defence systems against bacterial infection.

Neuropeptides are one of the largest and most diverse families of signaling molecules in animals and, accordingly, they regulate many physiological processes and behaviors. Genome and transcriptome sequencing has enabled the identification of genes encoding neuropeptide precursor proteins in species from a growing variety of taxa, including bilaterian and non-bilaterian animals. Of particular interest are deuterostome invertebrates such as the phylum Echinodermata, which occupies a phylogenetic position that has facilitated reconstruction of the evolution of neuropeptide signaling systems in Bilateria. However, our knowledge of neuropeptide signaling in echinoderms is largely based on bioinformatic and experimental analysis of eleutherozoans—Asterozoa (starfish and brittle stars) and Echinozoa (sea urchins and sea cucumbers). Little is known about neuropeptide signaling in crinoids (feather stars and sea lilies), which are a sister clade to the Eleutherozoa. Therefore, we have analyzed transcriptome/genome sequence data from three feather star species, Anneissia japonica, Antedon mediterranea, and Florometra serratissima, to produce the first comprehensive identification of neuropeptide precursors in crinoids. These include representatives of bilaterian neuropeptide precursor families and several predicted crinoid neuropeptide precursors. Using A. mediterranea as an experimental model, we have investigated the expression of selected neuropeptides in larvae (doliolaria), post-metamorphic pentacrinoids and adults, providing new insights into the cellular architecture of crinoid nervous systems. Thus, using mRNA in situ hybridization F-type SALMFamide precursor transcripts were revealed in a previously undescribed population of peptidergic cells located dorso-laterally in doliolaria. Furthermore, using immunohistochemistry a calcitonin-type neuropeptide was revealed in the aboral nerve center, circumoral nerve ring and oral tube feet in pentacrinoids and in the ectoneural and entoneural compartments of the nervous system in adults. Moreover, functional analysis of a vasopressin/oxytocin-type neuropeptide (crinotocin), which is expressed in the brachial nerve of the arms in A. mediterranea, revealed that this peptide causes a dose-dependent change in the mechanical behavior of arm preparations in vitro—the first reported biological action of a neuropeptide in a crinoid. In conclusion, our findings provide new perspectives on neuropeptide signaling in echinoderms and the foundations for further exploration of neuropeptide expression/function in crinoids as a sister clade to eleutherozoan echinoderms.

Birds use stopovers during migration to interrupt endurance flight in order to minimize immediate and/or future fitness costs. Stopovers on ships is considered an exceptional and anecdotal event in the ornithological literature. This does not match the experience we had in the summer of 2021, during an oceanographic campaign in the Central Mediterranean, when we regularly observed on average 2.8 birds, of at least 13 species, stopping on board during the 25 days of the campaign. The median stopping time was 42 min, ranging from a few minutes to overnight stays on board. The probability of finding a bird stopping aboard increased with wind force and cloud cover. Birds also stopped more often in a headwind and did not stop when the wind came from different directions other than the headwind. The Central Mediterranean is one of the busiest sea routes in the world, combining the mean daily number of birds on board with the thousands of ships that pass through it during the 3 months of summer migration; we estimate that nearly 4 million birds could use ships as stopover sites. This behaviour may represent a modern-day strategy that uses ships as stopovers in the event of adverse weather conditions or could act as an ecological trap, increasing the mortality of migrants. This phenomenon deserves more research attention and further studies recording body condition and tagging of individuals on board would be informative.

The Southern smooth snake, Coronella girondica, is a small-sized colubrid found in Northwest Africa and Southwest Europe. Mitochondrial DNA-based studies showed that the species can be split into five clades: two from Northwest Africa (one Moroccan and one Tunisian-Algerian) and three from Europe (one in the south-west of the Iberian Peninsula, one in the south-east of Spain and one in the rest of the European range). With regards to Italy, to date, only two samples have been analysed both from the Province of Pisa, Tuscany, pointing at that fact that genetic characterisation of Italian populations is still lacking. Accordingly, we have increased the sampling coverage with 19 new samples from northern and central regions of Italy, including two populations, apparently disconnected from the rest of the known range, and analysed their phylogenetic relationships using a portion of the mitochondrial cytochrome b gene. Our results confirm the general phylogenetic arrangement detected in previous studies; specifically for Italian populations, no variability emerged from the Apennine populations, and a slight differentiation could be shown for the Alpine and subalpine ones. This pattern can be explained assuming past spread and recent isolation of C. girondica relict populations in the Alpine region, likely during the Last Glacial Maximum. Later, during the Holocene, the Italian Alps and the Po Plain went through various climatic variations and high anthropization which may have influenced C. girondica distribution through expansion and contraction processes.

Planning conservation actions requires detailed information on species’ geographic distribution. Species distribution data are most needed in areas hosting unique or endangered biodiversity. Italy is one of the European countries with the highest levels of herpetological diversity and endemism and is home to several threatened species of amphibians and reptiles. Information on the distribution of species’ habitats can help identify sites where the species is most likely to thrive, as viable populations depend on it. Area of Habitat (AOH) maps reveal the distribution of the habitat available to the species within their geographic range. We produced high resolution, freely accessible global area of habitat maps for 60 species of reptiles and amphibians distributed in Italy, which represent 60% of all Italian amphibian and reptile species. We validated a total of 44 AOH maps through a presence-only based evaluation method, with 86% of these maps showing a performance better than expected by chance. AOH maps can be used as a reference for conservation planning, as well as to investigate macroecological patterns of Italian herpetofauna. Furthermore, AOH maps can help monitoring habitat loss, which is known to be a major threat to many reptile and amphibian species in Europe.

In this study we compared the heavy metal concentration found in different tissues and eggs of the loggerhead sea turtle and evaluated the potential ecotoxicological risk for this important species. Eighteen heavy metal elements were determined in different tissues (liver, gonads, fat, kidney, heart, brain, and spleen) of nine individuals of Caretta caretta found stranded along the coasts of Messina (Sicily, Italy) and in the shell and yolk of six eggs from the island of Linosa (Sicily, Italy). For the analysis of the heavy metals, we used the analytical procedures in accordance with the EPA 200.8 method supplemented by EPA 6020b with three replicates for each measurement. The elements analysed showed different organotropism even if the liver showed higher levels of bioaccumulation. Turtles’ tissues showed the highest values of iron in the liver, followed by zinc in the heart and arsenic in the kidney. Regarding eggs, zinc, iron, and barium were dominant in the yolk and iron, boron, and copper in the eggshell. From the analyses carried out the worrying levels of arsenic and cadmium in the kidneys and liver of C. caretta raise questions about the risk related to exposure to these non-essential elements. This study highlights the importance of multi-element biomonitoring by increasing knowledge on the biodistribution of 18 heavy metals and the related potential risks for C. caretta. We also exploring for the first time the presence of several heavy metals in the eggs and their possible implication for the survival of the species.

Vecchioni, Luca, Arculeo, Marco, Hundt, Peter J., Marrone, Federico (2022): The valid genus name of the European freshwater blennies, Ichthyocoris or Salariopsis (Teleostei: Blenniidae)? Zootaxa 5162 (1): 99-100, DOI: https://doi.org/10.11646/zootaxa.5162.1.8

Microplastics (MPs) are nowadays abundant, persistent, and ubiquitous in the environment, representing a new threat for terrestrial, marine, and freshwater ecosystems. Although anuran populations and species are globally declining, the effect of MP exposure on this taxon has been poorly investigated. With the aim of assessing the effects of microplastic exposure on the defensive responses of Italian agile frog (Rana latastei) tadpoles, we exposed them to three different concentrations (1, 7, and 50 mg L−1) of a mixture of plastic polymers (HPDE, PVC, PS, and PES) for 2 weeks. Then, we measured the total distance covered by individual tadpoles before and after exposure to tadpole-fed dragonfly larvae (Aeshna cyanea) cues. As expected, predation risk sharply lowered the total distance travelled by tadpoles; however, MP concentration did not affect their defensive performances. We also collected data on tadpole development, activity, and mortality. In contrast with previous experiments, neither tadpole growth nor mortality varied with MP concentration. Our results indicate that the intensity of MP effects on growth and development may depend on tadpole size, with large tadpoles being less susceptible to the negative effects of MP exposure.

We explored the effects of weather on the timing and reproduction of the Mediterranean Peregrine Falcon Falco peregrinus brookei and the Lanner Falcon F. biarmicus feldeggii living on the Mediterranean island of Sicily. We found that the start date of incubation has changed during 1979–2019 and analysed whether incubation timing affected the productivity of both populations and whether the change of incubation date and the quality of breeding sites depended on climatic conditions. Overall spring temperature and rainfall increased on Sicily and the incubation date of the Peregrine and the Lanner Falcon has shifted to be about one week later over the time period 1979 to 2019. Linear mixed modelling showed the influence of winter conditions and random effects (climate sector of island, year of study) on incubation date in both species. The increase in February rainfall has delayed incubation in the Peregrine Falcon, while we could not identify a specific monthly effect delaying incubation in the Lanner Falcon. In both species, the shift in incubation date has resulted in a decrease in productivity (number of fledglings). Weather conditions in late spring predicted the quality of the breeding site of Lanner Falcons but not of Peregrines. The breeding phenology of both falcons shows a common response to weather conditions on Sicily, however the Lanner Falcon seems more sensitive than the Peregrine to the changing climate. Climate effects add to other anthropogenic impacts negatively affecting the future survival of this insular population, which is the largest in Europe.