51. Whole-genome resequencing reveals molecular imprints of anthropogenic and natural selection in wild and domesticated sheep
- Author
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De-Yin, Zhang, Xiao-Xue, Zhang, Fa-Di, Li, Lv-Feng, Yuan, Xiao-Long, Li, Yu-Kun, Zhang, Yuan, Zhao, Li-Ming, Zhao, Jiang-Hui, Wang, Dan, Xu, Jiang-Bo, Cheng, Xiao-Bin, Yang, Wen-Xin, Li, Chang-Chun, Lin, Bu-Bo, Zhou, and Wei-Min, Wang
- Subjects
Genome ,Sheep ,Animals ,Genomics ,Sequence Analysis, DNA ,Selection, Genetic ,Sheep, Domestic - Abstract
The abundance of domesticated sheep varieties and phenotypes is largely the result of long-term natural and artificial selection. However, there is limited information regarding the genetic mechanisms underlying phenotypic variation induced by the domestication and improvement of sheep. In this study, to explore genomic diversity and selective regions at the genome level, we sequenced the genomes of 100 sheep across 10 breeds and combined these results with publicly available genomic data from 225 individuals, including improved breeds, Chinese indigenous breeds, African indigenous breeds, and their Asian mouflon ancestor. Based on population structure, the domesticated sheep formed a monophyletic group, while the Chinese indigenous sheep showed a clear geographical distribution trend. Comparative genomic analysis of domestication identified several selective signatures, including家绵羊丰富的品种和表型主要是长期自然和人工选择的结果。然而,关于绵羊在驯化和改良中所导致表型变异的遗传机制的研究有限。在该研究中,为了探讨绵羊的基因组多样性和选择信号,对10个品种的100只羊进行全基因组重测序,并结合公共数据库中公布的亚洲摩弗伦野羊、非洲地方绵羊品种、中国地方绵羊品种以及培育绵羊品种的225个个体的基因组数据进行研究。群体结构分析表明,家绵羊聚为单独的一类,而中国地方绵羊呈现明显的地理分布趋势。在驯化过程中,发现了与免疫反应(
- Published
- 2022