2,188 results on '"Ying T"'
Search Results
52. Well-Being: Bio-Ecological, Life Course, and Public Health Perspectives
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Wulczyn, Fred, primary, Richard, P. Barth, additional, Ying-Ying, T. Yuan, additional, Harden, Brenda Jones, additional, and Landsverk, John, additional
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- 2017
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53. Placement in Foster Care
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Wulczyn, Fred, primary, Richard, P. Barth, additional, Ying-Ying, T. Yuan, additional, Harden, Brenda Jones, additional, and Landsverk, John, additional
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- 2017
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54. Introduction to Part 1
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Wulczyn, Fred, primary, Richard, P. Barth, additional, Ying-Ying, T. Yuan, additional, Harden, Brenda Jones, additional, and Landsverk, John, additional
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- 2017
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55. Beyond Common Sense
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Wulczyn, Fred, primary, Richard, P. Barth, additional, Ying-Ying, T. Yuan, additional, Harden, Brenda Jones, additional, and Landsverk, John, additional
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- 2017
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56. Beyond Common Sense to Evidence-Based Policymaking
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Wulczyn, Fred, primary, Richard, P. Barth, additional, Ying-Ying, T. Yuan, additional, Harden, Brenda Jones, additional, and Landsverk, John, additional
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- 2017
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57. Altering the Early Life Course of Children in Child Welfare: Evidence-Based Interventions for Infants, Toddlers, and Preschoolers
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Wulczyn, Fred, primary, Richard, P. Barth, additional, Ying-Ying, T. Yuan, additional, Harden, Brenda Jones, additional, and Landsverk, John, additional
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- 2017
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58. Postexercise hypotensive response in stroke patients following acute moderate or high intensity cycling session
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Ying T Sia, François Trudeau, Thalia Lapointe, and Julie Houle
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medicine.medical_specialty ,Ambulatory blood pressure ,Blood Pressure ,Physical Therapy, Sports Therapy and Rehabilitation ,High-Intensity Interval Training ,Post-Exercise Hypotension ,Internal medicine ,medicine ,Humans ,Aerobic exercise ,Orthopedics and Sports Medicine ,Aged ,Ischemic Stroke ,Cross-Over Studies ,business.industry ,Blood Pressure Monitoring, Ambulatory ,Middle Aged ,Crossover study ,Intensity (physics) ,Blood pressure ,Ischemic Attack, Transient ,Hypertension ,Ambulatory ,Cardiology ,business ,Cycling ,High-intensity interval training - Abstract
BACKGROUND Hypertension is highly prevalent in stroke patients and reducing blood pressure is a priority. Aerobic exercise is known to induce post-exercise hypotensive responses, but limited studies have documented this concept in stroke patients. The purpose was to investigate the effect of a single bout of moderate intensity continuous training (MICT) and high intensity interval training (HIIT) on post-exercise ambulatory blood pressure with patients with prior ischemic stroke or transient ischemic attack (TIA). METHODS Ten hypertensive adults (mean age: 70 ± 9 years) with prior ischemic stroke or TIA participated using a randomized crossover design. Ambulatory blood pressure was monitored for up to 8 hours after isocaloric either ergocycle MICT or HIIT of respectively 50% and 95% of peak power output. Blood pressure was compared to pre-exercise resting measure. RESULTS HIIT and MICT induced a decrease of systolic blood pressure of -11.0 ± 9.2 mmHg and -4.7 ± 4.5 mmHg respectively (p= 0.03) immediately after the exercise. Ambulatory systolic blood pressure showed a steady linear increase (R2 = 0.90; p< 0.001) of ~1.2 mmHg/hour and returned to pre-exercise measure after 8 hours. Effect of the two exercise conditions over time did not significantly differ (p= 0.278). Diastolic blood pressure was not affected by both exercises. CONCLUSIONS Those results suggest that HIIT induce a systolic blood pressure reduction of greater magnitude than MICT immediately after cycling exercise among patients with prior ischemic stroke or TIA. For both exercises, effects on ambulatory blood pressure are similar and persist up to 8 hours.
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- 2022
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59. Postexercise hypotensive response in stroke patients following acute moderate or high intensity cycling session
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LAPOINTE, Thalia, primary, TRUDEAU, François, additional, SIA, Ying T., additional, and HOULE, Julie, additional
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- 2022
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60. SrGa12O19: The first low-εr Ga-based microwave dielectric ceramic with anomalous positive τf
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Yang Yang, Weishuang Fang, Huixing Lin, Jie Li, Huaicheng Xiang, Ying Tang, Lei Li, and Liang Fang
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magnetoplumbite ,microwave dielectric properties ,rattling effect ,chemical bond theory ,Clay industries. Ceramics. Glass ,TP785-869 - Abstract
Dielectric ceramics with low permittivity (εr), high quality factor (Q×f), and near-zero resonant frequency (τf) in the microwave bands are key materials used in fifth/sixth-generation (5G/6G) telecommunication, whileτf of most low-εr microwave dielectric ceramics is relatively negative. In this work, the first low-εr Ga-based ceramic SrGa12O19 with an anomalous positive τf was reported, and the causes of the positive τf, intrinsic polarization, and loss mechanism were systematically studied. X-ray diffraction (XRD) and transmission electron microscopy (TEM) revealed that the SrGa12O19 ceramic formed a pure hexagonal magnetoplumbite structure with spinel blocks and rock-salt blocks stacked along the crystallographic c-axis. When sintered at 1430 °C, it possessed the optimal microwave dielectric properties of a low εr of 14.46, high Q×f of 64,705 GHz, and exceptional positive τf of +55.7 ppm/°C, along with a low linear thermal expansion coefficient (αL) of 11.617 ppm/°C. The large positive deviation between εr and εr(C–M) of 45.31% resulted from the rattling effect of atoms in the rock-salt block. The unique positive τf (+55.7 ppm/°C) was governed by the rattling effect, resulting in a positive ταm (the temperature coefficient of ion polarizability) of 8.489 ppm/°C and a large negative temperature coefficient of permittivity (τε) of −132.864 ppm/°C. Phillips–Vechten–Levine (P–V–L) chemical bond theory revealed greater contributions of the spinel block to bond ionicity (fi, 52.95%), permittivity (ε, 55.15%), bond energy (E, 56.87%), and lattice energy (U, 74.88%) than those of the rock-salt block. The intrinsic dielectric properties were analyzed using infrared (IR) reflectivity spectra. The favorable performance of the SrGa12O19 ceramic indicated that it is a novel τf compensator. This selection of compounds with different structural layer combinations provides a new idea for exploring excellent microwave dielectric ceramics.
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- 2024
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61. Application of MALDI-TOF mass spectrometry for identification of Nocardia species
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Ya Liu, Si-Ying Wu, Jin Deng, Kai-Wen Zhuang, Ying Tang, Nan Wu, Wei-Li Zhang, Quan-Feng Liao, Yu-Ling Xiao, and Mei Kang
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MALDI-TOF MS ,Nocardia ,Rapid identification ,Microbiology ,QR1-502 - Abstract
Abstract Background Nocardiosis, despite its rarity and underreporting, is significant due to its severe impact, characterized by high morbidity and mortality rates. The development of a precise, reliable, rapid, and straightforward technique for identifying the pathogenic agent in clinical specimens is crucial to reduce fatality rates and facilitate timely antimicrobial treatment. In this study, we aimed to identify Nocardia spp. in clinical isolates, using MALDI-TOF MS as the primary method, with molecular methods as the gold standard. Clinical Nocardia isolates were identified using 16S rRNA/hsp65/gyrB/secA1/rpoB gene sequencing. Identification performance of the Bruker MALDI Biotyper 3.1 (V09.0.0.0_8468) and MBT Compass 4.1 (V11.0.0.0_10833) for Nocardia identification was evaluated. Results Seventy-six Nocardia isolates were classified into 12 species through gene sequencing. The MALDI Biotyper 3.1 (V09.0.0.0_8468) achieved 100% genus-level accuracy and 84.2% species accuracy (64/76). The MBT Compass 4.1 with the BDAL Database (V11.0.0.0_10833) improved species identification to 98.7% (75/76). The updated database enhanced species level identification with scores > 1.7, increasing from 77.6% (59/76) to 94.7% (72/76), a significant improvement (P = 0.001). The new and simplified extraction increased the proportion of strains identified to the species level with scores > 1.7 from 62.0% (18/29) to 86.2% (25/29) (P = 0.016). An in-house library construction ensured accurate species identification for all isolates. Conclusions The Bruker mass spectrometer can accurately identify Nocardia species, albeit with some variations observed between different database versions. The MALDI Biotyper 3.1 (V09.0.0.0_8468) has limitations in identifying Nocardia brasiliensis, with some strains only identifiable to the genus level. MBT Compass 4.1 (V11.0.0.0_10833) effectively addresses this shortfall, improving species identification accuracy to 98.7%, and offering quick and reliable identification of Nocardia. Both database versions incorrectly identified the clinically less common Nocardia sputorum as Nocardia araoensis. For laboratories that have not upgraded their databases and are unable to achieve satisfactory identification results for Nocardia, employing the new and simplified extraction method can provide a degree of improvement in identification outcomes.
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- 2024
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62. Comparative efficacy of cryoablation versus robot-assisted partial nephrectomy in the treatment of cT1 renal tumors: a systematic review and meta-analysis
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HuiYu Gao, Lin Zhou, JiaBin Zhang, Qiang Wang, ZiYuan Luo, Qian Xu, Ying Tan, Hui Shuai, JunJie Zhou, Xiang Cai, YongBo Zheng, Wang Shan, Xi Duan, and Tao Wu
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Renal tumors ,Ablation ,Cryoablation ,Robot-assisted partial nephrectomy ,Meta-analysis ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Abstract Purpose This study utilizes a meta-analytic approach to investigate the effects of cryoablation and robot-assisted partial nephrectomy on perioperative outcomes, postoperative renal function, and oncological results in patients. Methods This study followed the Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) statement. Four electronic databases (PubMed, Embase, Web of Science, and the Cochrane Library database) were systematically searched to identify relevant studies published in English up to November 2023. The primary outcomes were perioperative results, complications, postoperative renal function and oncologic outcomes. Review Manager 5.4 was used for this analysis. Results This study included a total of 10 studies comprising 2,011 patients. Compared to RAPN (Robot-Assisted Partial Nephrectomy), the CA (Cryoablation) group had a shorter hospital stay [MD -1.76 days; 95% CI -3.12 to -0.41; p = 0.01], less blood loss [MD -104.60 ml; 95% CI -152.58 to -56.62; p
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- 2024
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63. Food circular economy and safety considerations in waste management of urban manufacturing side streams
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Ying Tong Yeo, Cia Min Lim, Alfonso Isaias Vargas Huaco, and Wei Ning Chen
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Nutrition. Foods and food supply ,TX341-641 ,Food processing and manufacture ,TP368-456 - Abstract
Abstract In food circular economy, the utilization of food manufacturing side streams (FMSS) offers significant potential instead of being discarded. However, reincorporating FMSS into the food value chain raises food safety concerns due to potential food hazards. This perspective explores food safety risks associated with circular management of FMSS by using a ‘Quad-Modal hazard dynamic’ approach with case studies. Future research and advancements in food safety control strategies are also discussed.
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- 2024
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64. Identification of common biomarkers in diabetic kidney disease and cognitive dysfunction using machine learning algorithms
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Jing Peng, Sha Yang, Chaomin Zhou, Chenguang Qin, Kaiyun Fang, Ying Tan, Jingjing Da, Jiqing Zhang, and Yan Zha
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Diabetic kidney disease ,Cognitive dysfunction ,Machine learning algorithms ,RNA sequencing ,SH3RF1 ,Medicine ,Science - Abstract
Abstract Cognitive dysfunction caused by diabetes has become a serious global medical issue. Diabetic kidney disease (DKD) exacerbates cognitive dysfunction in patients, although the precise mechanism behind this remains unclear. Here, we conducted an investigation using RNA sequencing data from the Gene Expression Omnibus (GEO) database. We analyzed the differentially expressed genes in DKD and three types of neurons in the temporal cortex (TC) of diabetic patients with cognitive dysfunction. Through our analysis, we identified a total of 133 differentially expressed genes (DEGs) shared between DKD and TC neurons (62 up-regulated and 71 down-regulated). To identify potential common biomarkers, we employed machine learning algorithms (LASSO and SVM-RFE) and Venn diagram analysis. Ultimately, we identified 8 overlapping marker genes (ZNF564, VPS11, YPEL4, VWA5B1, A2ML1, KRT6A, SEC14L1P1, SH3RF1) as potential biomarkers, which exhibited high sensitivity and specificity in ROC curve analysis. Functional analysis using Gene Ontology (GO) revealed that these genes were primarily enriched in autophagy, ubiquitin/ubiquitin-like protein ligase activity, MAP-kinase scaffold activity, and syntaxin binding. Further enrichment analysis using Gene Set Enrichment Analysis (GSEA) and Gene Set Variation Analysis (GSVA) indicates that these biomarkers may play a crucial role in the development of cognitive dysfunction and diabetic nephropathy. Building upon these biomarkers, we developed a diagnostic model with a reliable predictive ability for DKD complicated by cognitive dysfunction. To validate the 8 biomarkers, we conducted RT-PCR analysis in the cortex, hippocampus and kidney of animal models. The results demonstrated the up-regulation of SH3RF1 in the cortex, hippocampus and kidney of mice, which was further confirmed by immunofluorescence and Western blot validation. Notably, SH3RF1 is a scaffold protein involved in cell survival in the JNK signaling pathway. Based on these findings, we support that SH3RF1 may be a common gene expression feature that influences DKD and cognitive dysfunction through the apoptotic pathway.
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- 2024
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65. Investigation of the furcation morphology of permanent mandibular first molars by using micro-computed tomography
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Yinfeng Qiu, Ying Tang, Panpan Zhang, Jin Li, and Yongchun Gu
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X-ray microtomography ,Tooth root ,Molar ,Furcation defects ,Dental enamel ,Dentistry ,RK1-715 - Abstract
Abstract Background To investigate the anatomic features of the root furcation of permanent mandibular first molars. Methods A total of 50 extracted mandibular first molars (25 two-rooted and 25 three-rooted) were collected and scanned using micro-computed tomography. The digital models of teeth and root canal systems were reconstructed three-dimensionally. The tooth models were displayed in parallel projection mode from buccal and distal views. Screenshots were captured and subsequently analyzed using Image-Pro Plus 6.0 software after calibration. The furcation angle, root trunk length, maximum depth and level of distal root concaves of mesial roots, and length of enamel projections were measured, and the furcation types (classified into type V, type U and type W) were detected. Statistical analysis was performed using the Shapiro-Wilk’s test, one-way analysis of variance, Student’s t-test and Chi-square test. Results The mean furcation angle between the distobuccal (DB) and distolingual (DL) roots (in distal view) was the greatest (59.2°), whereas the furcation angle between the mesial and DL roots (in buccal view) was the smallest (25.4°) among the four furcation angles (all p 0.05). The frequency of type V was the highest (54.0%), followed by type U (26.0%), and type W had the lowest occurrence rate (20.0%). The mean length of distal root trunk in the three-rooted mandibular molars was significantly greater than that of the buccal/lingual one (3.7 mm vs. 3.0 mm, p
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- 2024
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66. Recruitment of USP10 by GCS1 to deubiquitinate GRP78 promotes the progression of colorectal cancer via alleviating endoplasmic reticulum stress
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Yang Chen, Hengyang Shen, Zhenling Wang, Changzhi Huang, Hongqiang Zhang, Yu Shao, Ying Tong, Lei Xu, Yunfei Lu, and Zan Fu
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Colorectal cancer ,GCS1 ,Endoplasmic reticulum stress ,GRP78 ,Deubiquitination ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Abstract Background Long-term accumulation of misfolded proteins leads to endoplasmic reticulum (ER) stress in colorectal cancer (CRC). However, the precise pathways controlling the decision between survival and apoptosis in CRC are unclear. Therefore, in this study, we investigated the function and molecular mechanism of glucosidase I (GCS1) in regulating ER stress in CRC. Methods A public database was used to confirm the expression level of GCS1 in CRC and normal tissues. Clinical samples from our center were used to confirm the mRNA and protein expression levels of GCS1. Cell proliferation, migration, invasion, and apoptosis assays revealed the biological role of GCS1. Immunohistochemical techniques were used to evaluate the expression of key proteins in subcutaneous implanted tumors in nude mice, which provided further evidence for the biological function of GCS1 in promoting cancer in vivo. The results of coimmunoprecipitation-mass spectrometry analysis and immunofluorescence colocalization analysis the interaction between GCS1 and GRP78. In addition, the mechanism of action of USP10, GRP78, and GCS1 at the post- translational level was investigated. Finally, a tissue microarray was used to examine the connection between GCS1 and GRP78 expression and intracellular localization of these proteins using immunohistochemistry and immunofluorescence. Results The experimental results revealed that GCS1 was substantially expressed in CRC, with higher expression indicating a worse prognosis. Thus, GCS1 can enhance the proliferation and metastasis while inhibiting the apoptosis of CRC cells both in vivo and in vitro. Mechanistically, GCS1 binds to GRP78, recruits USP10 for deubiquitination of GRP78 to promote its degradation, and decreases ER stress-mediated apoptosis, increasing CRC cell proliferation and metastasis. Conclusions In summary, GCS1 stimulates CRC growth and migration and reduces ER stress-mediated apoptosis via USP10-mediated deubiquitination of GRP78. Our findings identify a possible therapeutic target for CRC.
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- 2024
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67. Bone targeted nano-drug and nano-delivery
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Yilun Wu, Bing Sun, Ying Tang, Aining Shen, Yanlin Lin, Xiaohui Zhao, Jingui Li, Michael J. Monteiro, and Wenyi Gu
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Biology (General) ,QH301-705.5 ,Physiology ,QP1-981 - Abstract
Abstract There are currently no targeted delivery systems to satisfactorily treat bone-related disorders. Many clinical drugs consisting of small organic molecules have a short circulation half-life and do not effectively reach the diseased tissue site. This coupled with repeatedly high dose usage that leads to severe side effects. With the advance in nanotechnology, drugs contained within a nano-delivery device or drugs aggregated into nanoparticles (nano-drugs) have shown promises in targeted drug delivery. The ability to design nanoparticles to target bone has attracted many researchers to develop new systems for treating bone related diseases and even repurposing current drug therapies. In this review, we shall summarise the latest progress in this area and present a perspective for future development in the field. We will focus on calcium-based nanoparticle systems that modulate calcium metabolism and consequently, the bone microenvironment to inhibit disease progression (including cancer). We shall also review the bone affinity drug family, bisphosphonates, as both a nano-drug and nano-delivery system for bone targeted therapy. The ability to target and release the drug in a controlled manner at the disease site represents a promising safe therapy to treat bone diseases in the future.
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- 2024
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68. Refined matrix completion for spectrum estimation of heart rate variability
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Lei Lu, Tingting Zhu, Ying Tan, Jiandong Zhou, Jenny Yang, Lei Clifton, Yuan-Ting Zhang, and David A. Clifton
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heart rate variability ,spectrum estimation ,matrix completion ,uncertainty ,hrv modelling ,Biotechnology ,TP248.13-248.65 ,Mathematics ,QA1-939 - Abstract
Heart rate variability (HRV) is an important metric in cardiovascular health monitoring. Spectral analysis of HRV provides essential insights into the functioning of the cardiac autonomic nervous system. However, data artefacts could degrade signal quality, potentially leading to unreliable assessments of cardiac activities. In this study, we introduced a novel approach for estimating uncertainties in HRV spectrum based on matrix completion. The proposed method utilises the low-rank characteristic of HRV spectrum matrix to efficiently estimate data uncertainties. In addition, we developed a refined matrix completion technique to enhance the estimation accuracy and computational cost. Benchmarking on five public datasets, our model shows effectiveness and reliability in estimating uncertainties in HRV spectrum, and has superior performance against five deep learning models. The results underscore the potential of our developed matrix completion-based statistical machine learning model in providing reliable HRV spectrum uncertainty estimation.
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- 2024
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69. Focus control of wide-angle metalens based on digitally encoded metasurface
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Yi Chen, Simeng Zhang, Ying Tian, Chenxia Li, Wenlong Huang, Yixin Liu, Yongxing Jin, Bo Fang, Zhi Hong, and Xufeng Jing
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metasurface ,metalens ,wide-angle ,coding ,Optics. Light ,QC350-467 - Abstract
Based on the principle of super-symmetric lens with quadratic phase gradient transformation, combined with the principle of digital coding of metasurface, we propose a wide-angle coded metalens for focusing control in two-dimensional space. This metalens achieves focus shift in the x-direction by changing the oblique incidence angle of the incident wave, and focus control in the y-direction by combining with the convolution principle of the digitally coded metasurface to achieve flexible control of light focusing in the two-dimensional plane. The metasurface unit is mainly composed of three-layer of metal structure and two layers of medium, and the transmission phase is obtained by changing the middle layer of metal structure, which in turn obtains the required phase distribution of the metalens. The design of the metalens realizes the function of the lens with a large viewing angle at the x-polarized incidence, and realizes two-dimensional focus control. Experimentally, we prepared the designed coding metalens and tested the focus control function of the wide-angle coding metalens. The experimental results are in good agreement with the design results.
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- 2024
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70. Whole-genome sequencing and pathogenicity analysis of Rhodococcus equi isolated in horses
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Bin Hu, Sichao Gao, Hao Zhang, Qiaoqiao Li, Gaojian Li, Shuairan Zhang, Yanan Xing, Yanyi Huang, Shuyi Han, Ying Tian, Wei Zhang, and Hongxuan He
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Rhodococcus equi ,Genome ,Gene islands ,Virulence factors ,Drug resistance genes ,Secretion systems ,Veterinary medicine ,SF600-1100 - Abstract
Abstract Background Rhodococcus equi (R. equi) is a Gram-positive zoonotic pathogen that frequently leads to illness and death in young horses (foals). This study presents the complete genome sequence of R. equi strain BJ13, which was isolated from a thoroughbred racehorse breeding farm in Beijing, China. Results The BJ13 genome has a length of 5.30 Mb and consists of a complete chromosome and a plasmid measuring 5.22 Mb and 0.08 Mb, respectively. We predicted 4,929 coding gene open reading frames, along with 52 tRNAs and 12 rRNAs. Through analysis of mobile genetic elements, we identified 6 gene islands and 1 prophage gene. Pathogenic system analysis predicted the presence of 418 virulence factors and 225 drug resistance genes. Secretion system analysis revealed the prediction of 297 secreted proteins and 1,106 transmembrane proteins. BJ13 exhibits genomic features, virulence-associated genes, potential drug resistance, and a virulence plasmid structure that may contribute to the evolution of its pathogenicity. Lastly, the pathogenicity of the isolated strain was assessed through animal experiments, which resulted in inflammatory reactions or damage in the lungs, liver, and spleen of mice. Moreover, by the 7th day post-infection, the mortality rate of the mice reached 50.0%, indicating complex immune regulatory mechanisms, including overexpression of IL-10 and increased production of pro-inflammatory cytokines like TNF-α. These findings validate the strong pathogenicity of the isolated strain and provide insights for studying the pathogenic mechanisms of Rhodococcus equi infection. Conclusions The complete genome sequence of R. equi strain BJ13 provides valuable insights into its genomic characteristics, virulence potential, drug resistance, and secretion systems. The strong pathogenicity observed in animal experiments underscores the need for further investigation into the pathogenic mechanisms of R. equi infection.
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- 2024
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71. Learning noise-induced transitions by multi-scaling reservoir computing
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Zequn Lin, Zhaofan Lu, Zengru Di, and Ying Tang
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Science - Abstract
Abstract Noise is usually regarded as adversarial to extracting effective dynamics from time series, such that conventional approaches usually aim at learning dynamics by mitigating the noisy effect. However, noise can have a functional role in driving transitions between stable states underlying many stochastic dynamics. We find that leveraging a machine learning model, reservoir computing, can learn noise-induced transitions. We propose a concise training protocol with a focus on a pivotal hyperparameter controlling the time scale. The approach is widely applicable, including a bistable system with white noise or colored noise, where it generates accurate statistics of transition time for white noise and specific transition time for colored noise. Instead, the conventional approaches such as SINDy and the recurrent neural network do not faithfully capture stochastic transitions even for the case of white noise. The present approach is also aware of asymmetry of the bistable potential, rotational dynamics caused by non-detailed balance, and transitions in multi-stable systems. For the experimental data of protein folding, it learns statistics of transition time between folded states, enabling us to characterize transition dynamics from a small dataset. The results portend the exploration of extending the prevailing approaches in learning dynamics from noisy time series.
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- 2024
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72. Investigating the mechanism of Bacillus amyloliquefaciens YUAD7 degrading aflatoxin B1 in alfalfa silage using isotope tracing and nuclear magnetic resonance methods
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Ying Tang, Xiaojing Liu, Linlin Tang, and Jianxun Dong
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Aflatoxin B1 ,Isotope tracing ,NMR ,Bacillus amyloliquefaciens YUAD7 ,Degradation products ,Detoxification mechanism ,Agriculture - Abstract
Abstract Background Fungal toxins are highly toxic and widely distributed, presenting a considerable threat to global agricultural development. Addressing the issue of aflatoxin B1 (AFB1) contamination in feed, it is crucial to ascertain the effectiveness and mechanisms of microbial strains in degradation. Results This study used isotope tracing and nuclear magnetic resonance (NMR) to investigate the degradation products of Bacillus amyloliquefaciens YUAD7 in complex substrates. By tracing 14C34-AFB1 and utilizing NMR, ultra-performance liquid chromatography–quadrupole time-of-flight/mass spectrometry (UPLC–Q-TOF/MS) purification and identification techniques, it was confirmed that AFB1 was degraded by YUAD7 into C12H14O4, C5H12N2O2, C10H14O2, and C4H12N2O, effectively removing 99.7% of AFB1 (100 μg/kg) from alfalfa silage. YUAD7 targeted the ester bond in the vanillin lactone ring structure, the ether bond in the furan ring structure, and the unsaturated carbon–carbon double bond in the furan ring structure during AFB1 degradation, disrupting the toxic sites responsible for AFB1's carcinogenic, teratogenic, and mutagenic effects and achieving biodegradation. Moreover, B. amyloliquefaciens YUAD7 transformed AFB1 through processes like hydrogenation, enzyme modification, and the loss of the -CO group while also being associated with metabolic pathways such as alanine, aspartate, glutamate metabolism, glutathione metabolism, cysteine and methionine metabolism, and pentose and glucuronate interconversions. Conclusions The utilization of isotope tracing allowed for rapid identification of degradation products in complex substrates, while NMR elucidated the structures of these products. This deepens our understanding of AFB1 biodegradation mechanisms, providing technical support for the practical application of these bacteria in degradation, and new insights into studying the biological degradation mechanism. B. amyloliquefaciens YUAD7 can be used as a potential strain for degrading AFB1 in large-scale silage. Graphical Abstract
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- 2024
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73. The association between fat distribution and α1-acid glycoprotein levels among adult females in the United States
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Siqi Wu, Ying Teng, Yuanqi Lan, Maoyang Wang, Tianhua Zhang, Dali Wang, and Fang Qi
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α1-acid glycoprotein ,Obesity ,Fat distribution ,Inflammation ,Nutritional diseases. Deficiency diseases ,RC620-627 - Abstract
Abstract Background Visceral fat accumulation and obesity-induced chronic inflammation have been proposed as early markers for multiple disease states, especially in women. Nevertheless, the potential impact of fat distribution on α1-acid glycoprotein(AGP), a marker of inflammation, remains unclear. This research was conducted to investigate the relationships among obesity, fat distribution, and AGP levels. Methods A cross-sectional observational study was performed using blood samples from adult females recruited through the National Health and Nutrition Examination Survey from 2015 to 2018. Serum levels of AGP were measured using the Tina-quant α-1-Acid Glycoprotein Gen.2 assay. Based on the fat distribution data obtained from dual-energy X-ray absorptiometry assessments, body mass index (BMI), total percent fat (TPF), android percent fat (APF), gynoid percent fat (GPF), android fat/gynoid fat ratio (AGR), visceral percent fat (VPF), subcutaneous percent fat (SPF), visceral fat/subcutaneous fat ratio (VSR) were used as dependent variables. To investigate the link between fat distribution and AGP, multivariate linear regression analysis was utilized. Furthermore, a sensitivity analysis was also performed. Results The present study included 2,295 participants. After adjusting for covariates, BMI, TPF, APF, GPF, VPF, and SPF were found to be positively correlated with AGP levels (BMI: β = 23.65 95%CI:20.90–26.40; TPF: β = 25.91 95%CI:23.02–28.80; APF: β = 25.21 95%CI:22.49–27.93; GPF: β = 19.65 95%CI:16.96–22.34; VPF: β = 12.49 95%CI:9.08–15.90; SPF: β = 5.69, 95%CI:2.89–8.49; AGR: β = 21.14 95%CI:18.16–24.12; VSR: β = 9.35 95%CI:6.11–12.59, all P
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- 2024
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74. MiR-196a-5p hinders vascular smooth muscle cell proliferation and vascular remodeling via repressing BACH1 expression
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Ying Tong, Dan-Dan Wang, Yan-Li Zhang, Shuai He, Dan Chen, Ya-Xian Wu, and Qing-Feng Pang
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MiR-196a-5p ,BACH1 ,Hypertension ,Vascular remodeling ,Oxidative stress ,Medicine ,Science - Abstract
Abstract Hyperproliferation of vascular smooth muscle cells (VSMCs) is a driver of hypertensive vascular remodeling. This study aimed to uncover the mechanism of BTB and CNC homology 1 (BACH1) and microRNAs (miRNAs) in VSMC growth and hypertensive vascular remodeling. With the help of TargetScan, miRWalk, miRDB, and miRTarBase online database, we identified that BACH1 might be targeted by miR-196a-5p, and overexpressed in VSMCs and aortic tissues from spontaneously hypertensive rats (SHRs). Gain- and loss-of-function experiments demonstrated that miR-196a-5p suppressed VSMC proliferation, oxidative stress and hypertensive vascular remodeling. Double luciferase reporter gene assay and functional verification showed that miR-196a-5p cracked down the transcription and translation of BACH1 in both Wistar Kyoto rats (WKYs) and SHRs. Silencing BACH1 mimicked the actions of miR-196a-5p overexpression on attenuating the proliferation and oxidative damage of VSMCs derived from SHRs. Importantly, miR-196a-5p overexpression and BACH1 knockdown cooperatively inhibited VSMC proliferation and oxidative stress in SHRs. Furthermore, miR-196a-5p, if knocked down in SHRs, aggravated hypertension, upregulated BACH1 and promoted VSMC proliferation, all contributing to vascular remodeling. Taken together, targeting miR-196a-5p to downregulate BACH1 may be a promising strategy for retarding VSMC proliferation and hypertensive vascular remodeling.
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- 2024
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75. Geographical distribution of MTHFR C677T gene polymorphisms among the reproductive-age women in Chinese Han populations: based on migration
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Yifen Shen, Yongchun Gu, Ying Tang, Hao Shen, and Chao Liu
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Methylenetetrahydrofolate reductase ,Polymorphism ,Geographical distribution ,Chinese Han populations ,Migration ,Gynecology and obstetrics ,RG1-991 ,Public aspects of medicine ,RA1-1270 - Abstract
Abstract Background Methylenetetrahydrofolate reductase (MTHFR) is essential for the metabolism of folic acid and homocysteine. The MTHFR C677T polymorphism is associated with several disorders. Our study aims to explore the geographical distributions of the MTHFR C677T polymorphism of women in China and how migration affected the polymorphism in Suzhou. Methods A total of 7188 women of reproductive age were recruited in Suzhou of the study. Subjects were classified according to their native places after data extraction. MTHFR C677T gene polymorphisms were detected by quantitative PCR with genomic DNA isolated from blood samples. Results The frequencies of the 677T allele and 677TT genotype were higher in northern China than that in southern China and decreased in geographical gradients from north to south. The frequencies were considerably higher in the migrant population than that in the indigenous population of Suzhou. The migrant population have gradually changed the prevalence in Suzhou. Conclusions Our study suggested that the prevalence of MTHFR C677T polymorphisms among women varied across different geographical regions in Chinese Han populations. The 677T allele frequencies of the northern populations were significantly higher than those of the southern populations. The migrant population gradually changed the prevalence of the MTHFR C677T polymorphism in Suzhou.
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- 2024
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76. Evaluation of the FPMC respiratory panel for detection of respiratory tract pathogens in nasopharyngeal swab and sputum specimens
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Li Xue, Jianhong Zhu, Ke Lei, Zeshi Liu, Yiwei Tang, Bo Zhong, Ning Gao, Chaoliang Xiong, Jing Lei, Ying Tian, Weixiao Zhou, Nan Feng, Xue Zhang, Dong Chen, Jing Li, and Yan Geng
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Fluorescent probe melting curve PCR ,Respiratory pathogen ,Molecular detection ,Infectious and parasitic diseases ,RC109-216 - Abstract
Abstract Objectives The performance of the new Respiratory Pathogen panel (fluorescent probe melting curve, FPMC) for the qualitative detection of 12 organisms (chlamydia pneumoniae, mycoplasma pneumoniae, adenovirus, influenza A virus, influenza B virus, parainfluenza virus, rhinovirus, etc.) was assessed. Methods Prospectively collected nasopharyngeal swab (NPS) and sputum specimens (n = 635) were detected by using the FPMC panel, with the Sanger sequencing method as the comparative method. Results The overall percent concordance between the FPMC analysis method and the Sanger sequencing method was 100% and 99.66% for NPS and sputum specimens, respectively. The FPMC testified an overall positive percent concordance of 100% for both NPS and sputum specimens. The FPMC analysis method also testified an overall negative percent concordance of 100% and 99.38% for NPS and sputum specimens, respectively. Conclusions The FPMC analysis method is a stable and accurate assay for rapid, comprehensive detecting for respiratory pathogens.
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- 2024
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77. Proteomics shows that brain metastases of lung adenocarcinoma overexpress ribosomal proteins in response to gamma knife radiosurgery
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Luqing Tong, Ke Ye, Qun Chen, Xiaoxi Wang, Chi Hu, Qingsheng Xu, Lihui Zhou, Renya Zhan, and Ying Tong
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Brain metastasis ,Lung adenocarcinoma ,Gamma knife ,Proteomics ,Ribosome ,Radiation resistance ,Medicine ,Science - Abstract
Abstract Gamma knife radiosurgery (GKRS) is recommended as the first-line treatment for brain metastases of lung adenocarcinoma (LUAD) in many guidelines, but its specific mechanism is unclear. We aimed to study the changes in the proteome of brain metastases of LUAD in response to the hyperacute phase of GKRS and further explore the mechanism of differentially expressed proteins (DEPs). Cancer tissues were collected from a clinical trial for neoadjuvant stereotactic radiosurgery before surgical resection of large brain metastases (ChiCTR2000038995). Five brain metastasis tissues of LUAD were collected within 24 h after GKRS. Five brain metastasis tissues without radiotherapy were collected as control samples. Proteomics analysis showed that 163 proteins were upregulated and 25 proteins were downregulated. GO and KEGG enrichment analyses showed that the DEPs were closely related to ribosomes. Fifty-three of 70 ribosomal proteins were significantly overexpressed, while none of them were underexpressed. The risk score constructed from 7 upregulated ribosomal proteins (RPL4, RPS19, RPS16, RPLP0, RPS2, RPS26 and RPS25) was an independent risk factor for the survival time of LUAD patients. Overexpression of ribosomal proteins may represent a desperate response to lethal radiotherapy. We propose that targeted inhibition of these ribosomal proteins may enhance the efficacy of GKRS.
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- 2024
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78. Excessive accumulation of epicardial adipose tissue promotes microvascular obstruction formation after myocardial ischemia/reperfusion through modulating macrophages polarization
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Jinxuan Zhao, Wei Cheng, Yang Dai, Yao Li, Yuting Feng, Ying Tan, Qiucang Xue, Xue Bao, Xuan Sun, Lina Kang, Dan Mu, and Biao Xu
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Epicardial adipose tissue ,Microvascular obstruction ,Inflammation ,Macrophage ,Liraglutide ,GLP-1/GLP-2 receptor dual agonist ,Diseases of the circulatory (Cardiovascular) system ,RC666-701 - Abstract
Abstract Background Owing to its unique location and multifaceted metabolic functions, epicardial adipose tissue (EAT) is gradually emerging as a new metabolic target for coronary artery disease risk stratification. Microvascular obstruction (MVO) has been recognized as an independent risk factor for unfavorable prognosis in acute myocardial infarction patients. However, the concrete role of EAT in the pathogenesis of MVO formation in individuals with ST-segment elevation myocardial infarction (STEMI) remains unclear. The objective of the study is to evaluate the correlation between EAT accumulation and MVO formation measured by cardiac magnetic resonance (CMR) in STEMI patients and clarify the underlying mechanisms involved in this relationship. Methods Firstly, we utilized CMR technique to explore the association of EAT distribution and quantity with MVO formation in patients with STEMI. Then we utilized a mouse model with EAT depletion to explore how EAT affected MVO formation under the circumstances of myocardial ischemia/reperfusion (I/R) injury. We further investigated the immunomodulatory effect of EAT on macrophages through co-culture experiments. Finally, we searched for new therapeutic strategies targeting EAT to prevent MVO formation. Results The increase of left atrioventricular EAT mass index was independently associated with MVO formation. We also found that increased circulating levels of DPP4 and high DPP4 activity seemed to be associated with EAT increase. EAT accumulation acted as a pro-inflammatory mediator boosting the transition of macrophages towards inflammatory phenotype in myocardial I/R injury through secreting inflammatory EVs. Furthermore, our study declared the potential therapeutic effects of GLP-1 receptor agonist and GLP-1/GLP-2 receptor dual agonist for MVO prevention were at least partially ascribed to its impact on EAT modulation. Conclusions Our work for the first time demonstrated that excessive accumulation of EAT promoted MVO formation by promoting the polarization state of cardiac macrophages towards an inflammatory phenotype. Furthermore, this study identified a very promising therapeutic strategy, GLP-1/GLP-2 receptor dual agonist, targeting EAT for MVO prevention following myocardial I/R injury.
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- 2024
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79. Joint association of weight-adjusted-waist index and physical activity with insulin resistance in adolescents: a cross-sectional study
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Yong Zhou, Peng Tang, Yican Wang, Ying Tang, and Yujian Yang
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Cross-sectional study ,Homeostasis model assessment of insulin resistance ,National Health and Nutrition Examination Survey ,Physical activity ,Weight-adjusted waist index ,Diseases of the endocrine glands. Clinical endocrinology ,RC648-665 - Abstract
Abstract Background The weight-adjusted waist index (WWI) is a recently developed obesity metric, and the aim of this study was to investigate the relationship between physical activity (PA) and WWI and the homeostasis model assessment of insulin resistance (HOMA-IR) in adolescents, as well as the joint association of HOMA-IR. Methods This study was based on the National Health and Nutrition Survey conducted between 2013 and 2016 and included 1024 adolescents whose median age was 15.4. Multivariate linear regression was used to examine the associations between HOMA-IR and PA and WWI. Using generalized additive models, a potential nonlinear link between WWI and HOMA-IR was evaluated. Subgroup analysis was also carried out. Results The fully adjusted model revealed a positive association (β: 0.48, 95% CI: 0.43, 0.53) between the WWI and HOMA-IR. The HOMA-IR was lower in physically active (β: -0.16, 95% CI: -0.26, -0.05) participants versus inactive participants. Participants who had higher WWI and were not physically active (β: 0.69; 95% CI: 0.56, 0.82) had the highest levels of HOMA-IR compared to participants who had lower WWI and were physically active. Subgroup analysis revealed that these correlations were similar in males and females. Conclusion Our results demonstrated that higher WWI and PA were associated with a lower HOMA-IR and that WWI and PA had a combined association with HOMA-IR. The findings of this study are informative for the preventing insulin resistance in adolescents.
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- 2024
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80. Advancing Public Health Surveillance to Estimate Child Maltreatment Fatalities : Review and Recommendations
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Schnitzer, Patricia G., Gulino, Sam P., and Yuan, Ying-Ying T.
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- 2013
81. Mapping the central effects of chronic ketamine administration in an adolescent primate model by functional magnetic resonance imaging (fMRI)
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Yu, Hongluan, Li, Qi, Wang, Defeng, Shi, Lin, Lu, Gang, Sun, Lin, Wang, Li, Zhu, Wei, Mak, Ying T., Wong, Naikei, Wang, Yixiang, Pan, Fang, and Yew, David T.
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- 2012
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82. Binding Interaction Analysis of Phytoconstituents of Commiphora mukul with 3CLPro and PlPro Enzymes of SARS-CoV-2 Virus
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Rajeswari, Kalepu, primary, Jun Chen, W, additional, Aashika, A, additional, Xian Ying, T, additional, Choon Hoong, C, additional, Kuha, S, additional, and Chinta, Diya Rajasekhar, additional
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- 2022
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83. Fatty acid traits mediate the effects of uric acid on cancers: a Mendelian randomization study
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Jianing Li, Yongsheng Zhang, Tong Fu, Songyan Wang, Hongbo Cai, Fenghua Xu, Guoli Xing, and Ying Tong
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Mendelian randomization ,uric acid ,fatty acids ,cancer ,mediate ,Genetics ,QH426-470 - Abstract
IntroductionPrevious findings on the association between uric acid (UA) levels and cancer risk are conflicting. Moreover, the mechanisms underlying the interactions between UA levels, fatty acid traits, and cancer outcomes remain complex; it is still unclear whether elevated UA levels influence fatty acid traits and, thereby, contribute to an increased cancer risk. Therefore, we aimed to investigate the association between UA levels and cancer risk, with a specific focus on the potential mediating role of fatty acid traits.MethodsWe employed a Mendelian randomization (MR) analysis utilizing genetic data from large-scale genome-wide association studies to assess the causal relationships among UA levels, fatty acid traits, and cancer risk. The primary method used was the inverse variance-weighted approach alongside Bayesian-weighted Mendelian randomization. Other MR models were also applied for comparison. Sensitivity analyses, based on various statistical assumptions, were also performed to evaluate the robustness of the findings. A two-step MR analysis was conducted to explore the mediating effects of fatty acid traits on the relationship between UA levels and cancer risk.Results and Discussion Elevated UA levels were associated with an increased risk of in situ neoplasms, cervical cancer, and invasive mucinous ovarian cancer, while they were linked to a decreased risk of cancers of the eye and adnexa, small cell lung cancer, bronchus and lung cancer, respiratory system and intrathoracic organ cancers, as well as lung cancer. Mediation analysis revealed that fatty acid traits, particularly the docosahexaenoic acid/trans fatty acid ratio, mediated the relationship between UA levels and lung cancer risk. These findings underscore the potential of fatty acid traits to mediate the association between UA levels and cancer risk, offering new insights for targeted interventions and potentially improving clinical outcomes.
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- 2024
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84. Selection of antibacterial aptamers against Pseudomonas plecoglossicida and analysis on their potential binding proteins
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Yunting Fan, Xiaojun Lin, Ying Tan, Mao Lin, Ming Fang, Lixing Huang, Qingpi Yan, Deji Gao, Jiaen Wang, Qibiao Weng, Jun Bo, and Jiang Zheng
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Pseudomonas plecoglossicida ,SELEX ,Antibacterial aptamers ,Inhibition rate ,Aptamer-binding proteins ,Aquaculture. Fisheries. Angling ,SH1-691 - Abstract
Pseudomonas plecoglossicida is one of the main pathogens causing visceral white spot disease of the large yellow croaker (Pseudosciaena crocea). Although antibiotics are used to control P. plecoglossicida infections, the long-term and large-scale use of antibiotics can lead to the development of drug-resistant bacteria as well as environmental pollution. Therefore, it is necessary to develop novel antibacterial agents to treat P. plecoglossicida infections. In this study, we first developed a two-step-centrifugation method to isolate live and dead P. plecoglossicida cells. Subsequently, we used the Systematic Evolution of Ligands by Exponential Enrichment (SELEX) screening based on inhibition rate to directly isolate antibacterial aptamers from the random library without post-processing. We isolated five antibacterial aptamers, namely B1, B2, B4, B8, and B109, which showed good inhibitory effects against P. plecoglossicida. Among these, B4 showed the highest inhibitory effect (62.40 ± 4.17 %). Further analysis revealed no positive correlation between the inhibitory effect of aptamers and their affinities with the target bacterium. The B4- and B109-binding proteins were isolated from P. plecoglossicida by magnetic separation and sodium dodecyl sulfate–polyacrylamide gel electrophoresis (SDS-PAGE). Mass spectrometry analysis revealed that the 26 kDa ribosomal protein L2 was the probable B4-binding protein, while the 26 kDa ribosomal protein S3 and 75 kDa ribosomal protein S1 or succinate dehydrogenase flavoprotein subunit were the probable B109-binding proteins. Structural and subcellular localization analyses of these potential B4- and B109-binding proteins were also conducted. Our findings suggest that the inhibitory activity of the antibacterial aptamers against P. plecoglossicida may be mediated via their interaction with the ribosomal proteins, which can interfere with the protein synthesis process in the bacterium, affecting its growth. These findings provide the scientific basis for the development of functional antibacterial aptamers and the elucidation of their mechanisms of action.
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- 2024
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85. Inflammation-based scores predict chronic kidney disease progression in patients with chronic kidney disease and chronic heart failure
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Lu Cai, Licong Su, Ying Hu, Endi Cai, Hong Xu, Bicheng Liu, Jianping Weng, Chunbo Chen, Huafeng Liu, Qiongqiong Yang, Hua Li, Yaozhong Kong, Guisen Li, Qijun Wan, Yan Zha, Gang Xu, Yongjun Shi, Yilun Zhou, Guobin Su, Ying Tang, and Mengchun Gong
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Inflammation-based scores ,chronic kidney disease ,chronic heart failure ,prognosis ,Diseases of the genitourinary system. Urology ,RC870-923 - Abstract
Background Inflammation is associated with adverse outcomes of chronic kidney disease (CKD) or chronic heart failure (CHF), but few large data exist. We aimed to explore the clinical associations, and prognostic consequences of inflammation-based scores in patients with CKD and CHF.Methods This work was a retrospective cohort study. Glasgow Prognostic Score (GPS), modified Glasgow Prognostic Score (mGPS), Prognostic Nutritional Index (PNI) and Prognostic Index (PI), were used to explore its relationship with CKD progression in patients with CKD stage 1-3b and CHF from the China Renal Data System (CRDS). The composite end point of this study was CKD progression which was defined as eGFR reduction of 40% or progression to end stage renal disease (ESRD).Results Of 8491 patients were enrolled. Kaplan-Meier curve showed that compared to the lower inflammation-based scores, the increased scores have a higher rate of CKD progression, whether in GPS, mGPS, PNI or PI (log-rank test, p 0.05).Conclusions Inflammation-based scores, especially PNI may be a useful clinical biomarker for CKD progression in CKD with CHF patients.
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- 2024
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86. HBx integration in diffuse large B-cell lymphoma inhibits Caspase-3-PARP related apoptosis
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Yanchun Wang, Xiaolin Guan, Fangfang Lv, Yi Rong, Xin Meng, Ying Tong, Xiaolu Ma, Hui Zheng, Cuncun Chen, Suhong Xie, Heng Zhang, Feng Dong, Lin Guo, and Renquan Lu
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Diffuse large B cell lymphoma ,Hepatitis B virus ,HBx integration ,Apoptosis ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Diffuse large B-cell lymphoma (DLBCL) is the most common pathological type of non-Hodgkin lymphoma, and is closely associated with hepatitis B virus (HBV) infection status and hepatitis B X (HBx) gene integration. This project investigated the cellular biological effects and molecular mechanisms responsible for lymphomagenesis and the progression of HBx integration in DLBCL. The data showed that clinical DLBCL cells demonstrated HBx integration, and the sequencing analysis of integrated sites validated HBx integration in the constructed HBx-transfected cells. Compared with control cells, HBx-transfected cells had a significantly reduced proportion of mitochondrial membrane potential, signals of chromosomal DNA breaks, and proportion of apoptotic cells. Further studies found that this decreased apoptosis level was associated with a significant reduction of cleaved Caspase-3 and downstream poly ADP-ribose polymerase (PARP) proteins, revealing the molecular mechanisms of HBx-associated apoptosis in DLBCL. Animal experiments also demonstrated that the protein expression of cleaved Caspase-3 and PARP was prominently reduced in HBx-transfected cells from subcutaneous tumors in mice. Furthermore, the HBx-integrated cells in clinical tissues had significantly lower cleaved PARP levels than the HBx-negative samples. Therefore, HBx integration inhibits cell apoptosis through the Caspase-3-PARP pathway in DLBCL indicating a potential biomarker and therapeutic target in HBV related DLBCL.
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- 2024
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87. Mycolyltransferase is important for biofilm formation and pathogenesis of Tsukamurella keratitis
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Jade Lee-Lee Teng, Ying Tang, Samson Sai-Yin Wong, Man Lung Yeung, Jian-Pao Cai, Chen Chen, Elaine Chan, Jordan Yik-Hei Fong, Rex Kwok-Him Au-Yeung, Lifeng Xiong, Terrence Chi-Kong Lau, Susanna Kar-Pui Lau, and Patrick Chiu-Yat Woo
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Tsukamurella ,mycolyltransferase ,virulence ,keratitis ,conjunctivitis ,Koch's postulates ,Infectious and parasitic diseases ,RC109-216 ,Microbiology ,QR1-502 - Abstract
Tsukamurella, a group of multi-drug resistant, Gram-positive, aerobic, and partially acid-fast bacteria, are emerging causes of bacterial conjunctivitis and keratitis. However, the pathogenesis of Tsukamurella keratitis is largely unknown. To address this, we used New Zealand White rabbits to develop the first eye infection model and conducted in vitro tests to study the pathogenesis mechanisms of Tsukamurella. There is increasing evidence that biofilms play a significant role in ocular infections, leading us to hypothesize that biofilm formation is crucial for effective Tsukamurella infection. In order to look for potential candidate genes which are important in biofilm formation and Tsukamurella keratitis. We performed genome sequencing of two ocular isolates, T. pulmonis-PW1004 and T. tyrosinosolvens-PW899, to identify potential virulence factors. Through in vitro and in vivo studies, we characterized their biological roles in mediating Tsukamurella keratitis. Our findings confirmed that Tsukamurella is an ocular pathogen by fulfilling Koch's postulates, and using genome sequence data, we identified tmytC, encoding a mycolyltransferase, as a crucial gene in biofilm formation and causing Tsukamurella keratitis in the rabbit model. This is the first report demonstrating the novel role of mycolyltransferase in causing ocular infections. Overall, our findings contribute to a better understanding of Tsukamurella pathogenesis and provide a potential target for treatment. Specific inhibitors targeting TmytC could serve as an effective treatment option for Tsukamurella infections.
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- 2024
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88. Diagnostic value of ultrasound elastography in polycystic ovary syndrome: a systematic review and meta-analysis
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Zhongtan Ruan, Zhen Yu, Qianyu Qin, and Ying Tang
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Polycystic ovary syndrome ,PCOS ,ultrasound elastography ,shear wave elasticity ,ovarian strain ratio ,Meta-analysis ,Gynecology and obstetrics ,RG1-991 ,Diseases of the endocrine glands. Clinical endocrinology ,RC648-665 - Abstract
AbstractObjective The main purpose of this systematic review and meta-analysis was to investigate the diagnostic value of ultrasound elastography in the evaluation of polycystic ovary syndrome (PCOS).Methods A comprehensive and methodical investigation was carried out in the databases of PubMed, EMBASE, Cochrane, Scopus, Web of Science, and China National Knowledge Infrastructure, covering the entire duration of these databases until October 18, 2023. The primary purpose of this research was to evaluate and contrast ovarian tissue elasticity in people with and without PCOS. The elasticity of ovarian tissue was quantified using standardized mean difference (SMD).Results A total of eight studies were ultimately selected for systematic evaluation and meta-analysis. Five studies used shear wave elastography (SWE) as a diagnostic tool, and it was discovered that women with PCOS had higher levels of ovarian shear wave elasticity than their healthy counterparts. The SMD was determined to be 1.86 kilopascal (95% CI: 1.27 to 2.44). Three studies were conducted using strain elastography (SE) to compare the ovarian strain ratio of patients with PCOS to that of a healthy control group. The SMD for the PCOS group was 2.07 (95% CI: 1.79 to 2.34), which indicated that the ovarian strain ratio was significantly higher in that group.Conclusion This systematic review and meta-analysis found that women with PCOS had stiffer ovarian tissue than women without the disorder. Ultrasound elastography may provide clinicians with value beyond 2D ultrasound in the diagnosis of PCOS.
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- 2024
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89. Clinicopathological characteristics and gene mutations in 11 patients with lipoprotein glomerulopathy
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Yan Qin, Xiao-Jing Sun, Yi-Fang Hu, Meng Jing, Xiao-Juan Yu, Ming-Hui Zhao, and Ying Tan
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Genetic nephropathy ,lipoprotein nephropathy ,ApoE ,gene mutation ,dyslipidemia ,Diseases of the genitourinary system. Urology ,RC870-923 - Abstract
Objective Lipoprotein glomerulopathy (LPG) is a rare disorder characterized by the development of glomerular lipoprotein thrombosis. LPG exhibits familial aggregation, with mutations in the apolipoprotein E (APOE) gene identified as the leading cause of this disease. This study aimed to investigate APOE gene mutations and the clinicopathological features in eleven LPG patients.Methods Clinicopathological and follow-up data were obtained by extracting DNA, followed by APOE coding region sequencing analysis. This study analyzed clinical and pathological manifestations, gene mutations, treatment and prognosis.Results The mean age of the eleven patients was 33.82 years. Among them, five had a positive family history for LPG, ten presented with proteinuria, four exhibited nephrotic syndrome, and six presented with microscopic hematuria. Dyslipidemia was identified in ten patients. In all renal specimens, there was evident dilation of glomerular capillary lumens containing lipoprotein thrombi, and positive oil red O staining was observed in frozen sections of all samples. APOE gene testing revealed that one patient had no mutations, while the remaining ten patients exhibited mutations in the APOE gene, with three patients presenting with multiple mutations simultaneously. Following the confirmation of LPG diagnosis, treatment with angiotensin-converting enzyme inhibitor (ACEI)/angiotensin receptor blocker (ARB) was initiated, and the disease progressed slowly.Conclusion LPG is histologically characterized by lamellated lipoprotein thrombi in glomeruli, and kidney biopsy is essential for diagnosis. Mutations in the APOE gene are the leading cause of LPG. This study revealed clinicopathological characteristics and APOE gene mutations in patients with LPG, which helps us better understand the disease.
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- 2024
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90. Spatiotemporal distribution, environmental correlation and health risk analysis of Culex tritaeniorhynchus (Diptera: Culicidae) in Beijing, China
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Mei-DE. Liu, Qiu-Hong Li, Ting Liu, Xiu-Yan Xu, Junqi Ge, Tong-Yan Shen, Yun-BO. Wang, Xian-Feng Zhao, Xiao-Peng Zeng, Yong Zhang, and Ying Tong
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Culex tritaeniorhynchus ,Spatiotemporal ,Distribution ,Environment ,Urban ,Science (General) ,Q1-390 ,Social sciences (General) ,H1-99 - Abstract
The Culex tritaeniorhynchus Giles, 1901 (Diptera: Culicidae) is major vector of Japanese encephalitis (JE) in China, and this study aimed to uncover the vector's spatiotemporal distribution and environmental correlation in Beijing. In study area, the Remote Sensing (RS), Global Position System (GPS), and Geographic Information System (GPS) were used to clarify the distribution characteristics of vector on spatial and temporal scales, and regressions analysis of cross-sectional study was performed to detect the environmental factors linked with the density and presence of Cx. tritaeniorhynchus. In study area, the scenic area was the major environmental area for breeding of the vector, August was the primary peak month, the new urban development area (NUDA) was major distribution subarea of Beijing, and the vector could be detected throughout the subarea of Beijing from June to September. In the scenic area, the total value of light index within buffer zones of 100 m (LT_100) and the total value of NDVI index within buffer zones of 800 m (NDVI_800) determined whether there was a positive or negative vector in the trapping sites, and the total value of NDVI index within buffer zones of 100 m (NDVI_100) and LT_100 was linked to the density of the vector. Our findings provide better insight into the spatio-temporal distribution pattern, associated environmental risk factors, and health risk of vector in Beijing. Based on the results here, we could predict the risk of JE and create and implement location-specific JE prevention and control measures to prevent future risks during the urbanization advancement of Beijing.
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- 2024
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91. Lipid peroxidation triggered by the degradation of xCT contributes to gasdermin D-mediated pyroptosis in COPD
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Tianhua Hou, Laiyu Zhu, Yan Zhang, Ying Tang, Yun Gao, Shucheng Hua, Xinxin Ci, and Liping Peng
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Lipid peroxidation ,xCT ,Pyroptosis ,COPD ,Medicine (General) ,R5-920 ,Biology (General) ,QH301-705.5 - Abstract
Background: Pyroptosis is an inflammatory form of regulated necrosis that has been implicated in the pathogenesis of chronic obstructive pulmonary disease (COPD). However, the role of lipid peroxidation in pyroptosis and its underlying mechanisms in COPD remain unclear. Methods: In vitro, human bronchial epithelial cells (Beas-2b cells) were exposed to cigarette smoke extract (CSE) for 24 h. In vivo, mice were exposed to cigarette smoke (CS) for 4 weeks. To investigate the role of xCT, we used siRNA and AAV6 to conditionally knock down xCT in vitro and in vivo, respectively. Results: The administration of ferrostatin-1 (Fer-1), a ferroptosis inhibitor that inhibits lipid peroxidation, significantly reduced the cytotoxicity of CSE to Beas-2b cells and mitigated inflammatory exudation, lung injury and mucus hypersecretion in mice with CS-induced COPD. Fer-1 suppressed gasdermin D (GSDMD)-mediated pyroptosis caused by CS in vitro and in vivo. However, in Beas-2b cells and the lung epithelial cells of mice, conditional knockdown of xCT (a negative regulatory factor of lipid peroxidation) inhibited the xCT/GPx4 axis, leading to more severe lipid peroxidation and GSDMD-mediated pyroptosis during cigarette smoke exposure. Moreover, we found that CS promoted the degradation of xCT through the ubiquitin proteasome system (UPS) and that treatment with MG132 significantly inhibited the degradation of xCT and downregulated the expression of pyroptosis-related proteins. Conclusion: The results of this study suggested that the ubiquitination-mediated degradation of xCT drives GSDMD-mediated pyroptosis in COPD and is a potential therapeutic target for COPD.
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- 2024
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92. Export Spells and the Position of Global Value Chain: Evidence from China’s Industrial Firms
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Xiangyi Li, Ying Tang, and Xinting Ge
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History of scholarship and learning. The humanities ,AZ20-999 ,Social Sciences - Abstract
The international division of labor has entered the era of the global value chain (GVC) due to the continuous influence of the scientific and technological revolution. At the same time, sustainable development has taken center stage in the evolution of international trade, and the export spell is an important indicator to measure the sustainable development of export trade. Based on the China customs data, the Chinese industrial enterprises database and the Chinese input-output table from 2000 to 2012, this paper uses the survival analysis method to estimate the enterprises’ export spells and calculate their positions in the GVC through upstreamness. It then investigates the impact of export spells on the position changes of the GVC enterprises. According to the paper, export enterprises near the bottom of the GVC are more vulnerable to extinction. And the duration of enterprises’ export spells has a U-shaped relationship with their positions in the GVC, which means that enterprises will continue to move downstream of the GVC as duration increases, but positions will shift upstream if duration reaches the inflection point. The mechanism test shows that the quality of export products is an important channel through which the duration of enterprises’ export spells influences their GVC positions.
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- 2024
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93. Optical biosensing of monkeypox virus using novel recombinant silica-binding proteins for site-directed antibody immobilization
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Xixi Song, Ying Tao, Sumin Bian, and Mohamad Sawan
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Site-directed immobilization ,Silica-binding proteins ,Optical biosensing ,Monkeypox virus ,Spiked clinical samples ,Multi-virus biosensor ,Therapeutics. Pharmacology ,RM1-950 - Abstract
The efficient immobilization of capture antibodies is crucial for timely pathogen detection during global pandemic outbreaks. Therefore, we proposed a silica-binding protein featuring core functional domains (cSP). It comprises a peptide with a silica-binding tag designed to adhere to silica surfaces and tandem protein G fragments (2C2) for effective antibody capture. This innovation facilitates precise site-directed immobilization of antibodies onto silica surfaces. We applied cSP to silica-coated optical fibers, creating a fiber-optic biolayer interferometer (FO-BLI) biosensor capable of monitoring the monkeypox virus (MPXV) protein A29L in spiked clinical samples to rapidly detect the MPXV. The cSP-based FO-BLI biosensor for MPXV demonstrated a limit of detection (LOD) of 0.62 ng/mL in buffer, comparable to the 0.52 ng/mL LOD achieved using a conventional streptavidin (SA)-based FO-BLI biosensor. Furthermore, it achieved LODs of 0.77 ng/mL in spiked serum and 0.80 ng/mL in spiked saliva, exhibiting no cross-reactivity with other viral antigens. The MPXV detection process was completed within 14 min. We further proposed a cSP-based multi-virus biosensor strategy capable of detecting various pandemic strains, such as MPXV, the latest coronavirus disease (COVID) variants, and influenza A protein, to extend its versatility. The proposed cSP-modified FO-BLI biosensor has a high potential for rapidly and accurately detecting MPXV antigens, making valuable contributions to epidemiological studies.
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- 2024
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94. Interactive correlations between artificial light at night, health risk behaviors, and cardiovascular health among patients with diabetes: A cross‐sectional study
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Yi Zhang, Keyan Hu, Ying Tang, Qing Feng, Tian Jiang, Liwen Chen, Xin Chen, Chunhan Shan, Chen Han, Wenhui Chu, Nanzhen Ma, Honglin Hu, Hui Gao, and Qiu Zhang
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cardiovascular disease ,cardiovascular health ,diabetes ,health risk behavior ,outdoor light at night ,Diseases of the endocrine glands. Clinical endocrinology ,RC648-665 - Abstract
Abstract Background Artificial light at night (ALAN) is a common phenomenon and contributes to the severe light pollution suffered by more than 80% of the world's population. This study aimed to evaluate the relationship between outdoor ALAN exposure and cardiovascular health (CVH) in patients with diabetes and the influence of various modifiable factors. Methods A survey method based on the China Diabetes and Risk Factor Monitoring System was adopted. Study data were extracted for 1765 individuals with diabetes in Anhui Province. Outdoor ALAN exposure (nW/cm2/sr) within 1000 m of each participant's residential address was obtained from satellite imagery data, with a resolution of ~1000 m. Health risk behaviors (HRBs) were measured via a standardized questionnaire. A linear regression model was employed to estimate the relationship between outdoor ALAN, HRBs, and CVH. Results Participants' mean age was 59.10 ± 10.0 years. An association was observed between ALAN and CVH in patients with diabetes (β = 0.205) and exercise (β = −1.557), moderated by HRBs, or metabolic metrics. There was an association between ALAN, ALAN, vegetable intake, and CVH. Conclusions Exploring the relationship between ALAN exposure and cardiovascular and metabolic health provides policy data for improving light pollution strategies and reducing the risk of cardiovascular and metabolic disease in patients with diabetes.
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- 2024
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95. The impact of socialisation services in the whole process of agricultural production on food security—quasi-natural experimental evidence from China
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Ying Tao and Cuiping Zhao
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socialisation services in the whole process of agricultural production (ASS) ,food security (FS) ,means of agricultural production ,new agricultural business entities ,farmers’ household income ,Nutrition. Foods and food supply ,TX341-641 ,Food processing and manufacture ,TP368-456 - Abstract
Food security (FS) is an important guarantee for world peace and development and the basis for building a community of human destiny, which has a bearing on the sustainable development and future destiny of humankind. This study empirically analysis the relationship between socialisation services in the whole process of agricultural production (ASS) and guaranteeing FS, as well as the path of their role, using provincial panel data from 2010 to 2022 in China as an example, using the double-difference method. The regression results show that ASS can have the ability to contribute to the level of FS, and the conclusion still holds after a series of robustness tests. The results of the heterogeneity analysis show that the role of ASS in guaranteeing FS receives the influence of the level of agricultural development in each region, while it plays a greater role in the main food-producing areas. The mechanism analysis analyses the mechanism of the role of ASS in the whole process of agricultural production in guaranteeing FS from the three links of pre-production, mid-production and post-production respectively, and finds that ASS in the whole process of agricultural production is able to guarantee FS by reducing the cost of purchasing means of production in the pre-production stage, fostering a new type of agricultural management main body in the mid-production stage, and increasing the income of farmers’ household management in the post-production stage. Based on the above findings, this study proposes corresponding policy recommendations. This study can provide insights for ensuring world FS and contribute to maintaining social stability and development. The conclusions of the study are universally applicable, and all countries in the world can benefit from and draw lessons from it.
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- 2024
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96. Endothelial Cell‐Derived Extracellular Vesicles Promote Aberrant Neutrophil Trafficking and Subsequent Remote Lung Injury
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Shuang‐Feng Zi, Xiao‐Jing Wu, Ying Tang, Yun‐Peng Liang, Xu Liu, Lu Wang, Song‐Li Li, Chang‐De Wu, Jing‐Yuan Xu, Tao Liu, Wei Huang, Jian‐Feng Xie, Ling Liu, Jie Chao, and Hai‐Bo Qiu
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ALI/ARDS ,endothelial cells ,extracellular vesicles ,neutrophils ,sepsis ,Science - Abstract
Abstract The development of acute respiratory distress syndrome (ARDS) in sepsis is associated with substantial morbidity and mortality. However, the molecular pathogenesis underlying sepsis‐induced ARDS remains elusive. Neutrophil heterogeneity and dysfunction contribute to uncontrolled inflammation in patients with ARDS. A specific subset of neutrophils undergoing reverse transendothelial migration (rTEM), which is characterized by an activated phenotype, is implicated in the systemic dissemination of inflammation. Using single‐cell RNA sequencing (scRNA‐seq), it identified functionally activated neutrophils exhibiting the rTEM phenotype in the lung of a sepsis mouse model using cecal ligation and puncture. The prevalence of neutrophils with the rTEM phenotype is elevated in the blood of patients with sepsis‐associated ARDS and is positively correlated with disease severity. Mechanically, scRNA‐seq and proteomic analys revealed that inflamed endothelial cell (EC) released extracellular vesicles (EVs) enriched in karyopherin subunit beta‐1 (KPNB1), promoting abluminal‐to‐luminal neutrophil rTEM. Additionally, EC‐derived EVs are elevated and positively correlated with the proportion of rTEM neutrophils in clinical sepsis. Collectively, EC‐derived EV is identified as a critical regulator of neutrophil rTEM, providing insights into the contribution of rTEM neutrophils to sepsis‐associated lung injury.
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- 2024
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97. Multiple roles of mitochondrial autophagy receptor FUNDC1 in mitochondrial events and kidney disease
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Kaiqing Li, Xue Xia, and Ying Tong
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FUNDC1 ,mitochondrial autophagy ,kidney disease ,phosphorylation ,dephosphorylation ,Biology (General) ,QH301-705.5 - Abstract
This article reviews the latest research progress on the role of mitochondrial autophagy receptor FUN14 domain containing 1 (FUNDC1) in mitochondrial events and kidney disease. FUNDC1 is a protein located in the outer membrane of mitochondria, which maintains the function and quality of mitochondria by regulating mitochondrial autophagy, that is, the selective degradation process of mitochondria. The structural characteristics of FUNDC1 enable it to respond to intracellular signal changes and regulate the activity of mitochondrial autophagy through phosphorylation and dephosphorylation. During phosphorylation, unc-51-like kinase 1 (ULK1) promotes the activation of mitophagy by phosphorylating Ser17 of FUNDC1. In contrast, Src and CK2 kinases inhibit the interaction between FUNDC1 and LC3 by phosphorylating Tyr18 and Ser13, thereby inhibiting mitophagy. During dephosphorylation, PGAM5 phosphatase enhances the interaction between FUNDC1 and LC3 by dephosphorylating Ser13, thereby activating mitophagy. BCL2L1 inhibits the activity of PGAM5 by interacting with PGAM5, thereby preventing the dephosphorylation of FUNDC1 and inhibiting mitophagy. FUNDC1 plays an important role in mitochondrial events, participating in mitochondrial fission, maintaining the homeostasis of iron and proteins in mitochondrial matrix, and mediating crosstalk between mitochondria, endoplasmic reticulum and lysosomes, which have important effects on cell energy metabolism and programmed death. In the aspect of kidney disease, the abnormal function of FUNDC1 is closely related to the occurrence and development of many diseases. In acute kidney injury (AKI), cardiorenal syndrome (CRS), diabetic nephropathy (DN), chronic kidney disease (CKD) ,renal fibrosis (RF) and renal anemia, FUNDC1-mediated imbalance of mitophagy may be one of the key factors in disease progression. Therefore, in-depth study of the regulatory mechanism and function of FUNDC1 is of great significance for understanding the pathogenesis of renal disease and developing new treatment strategies.
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- 2024
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98. Clinical advances and challenges associated with TCR-T cell therapy for cancer treatment
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Jianing Li, Yongsheng Zhang, Tong Fu, Guoli Xing, Hongbo Cai, Kaiqing Li, Yutong Xu, and Ying Tong
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TCR-T cell therapy ,cancer immunotherapy ,clinical trials ,genetic engineering ,cancer ,therapeutic resistance ,Immunologic diseases. Allergy ,RC581-607 - Abstract
BackgroundT cell receptor (TCR)-T cell therapy is an innovative form of cancer immunotherapy that genetically modifies patients’ T cells to target and destroy cancer cells. However, the current status of clinical trials of TCR-T cell therapy for the treatment of cancer remains unclear. This study aimed to comprehensively analyze the registration trials related to TCR-T cell therapy for the treatment of cancer.MethodsA comprehensive search was conducted in the Trialtrove database for all clinical trials related to TCR-T cell therapy registered by August 1, 2024. Inclusion criteria focused on trials targeting TCR-T cell therapy for oncology, and excluded observational studies and incomplete data. Statistical analysis was performed on key trial characteristics, with between-group comparisons utilizing chi-square or Fisher’s exact tests.ResultsAnalysis of 174 eligible clinical trials revealed that TCR-T cell therapy exhibits significant efficacy across various tumor types, particularly in refractory hematologic malignancies and certain solid tumors. Additionally, combining TCR-T cell therapy with other immunotherapies enhanced these anti-tumor effects.ConclusionTCR-T cell therapy holds substantial promise for cancer treatment. Future research should focus on optimizing treatment protocols, enhancing efficacy, and minimizing prices to fully realize the potential of this therapy.
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- 2024
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99. Serum ferritin is a risk factor for pulmonary dysfunction in young patients with transfusion-dependent thalassemia
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Xiao Liang, Gaohui Yang, Lingling Shi, Lianjin Liu, Zhenbin Wei, Yumei Huang, Jing Bai, Yi Liang, Lingyuan Pan, Zhaoping Gan, Yu Lin, Yibin Yao, Ying Tang, Huicheng Huang, Xuemei Zhou, Yongrong Lai, and Rongrong Liu
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Transfusion-dependent thalassemia ,Pulmonary function ,Serum ferritin ,Iron overload ,Science (General) ,Q1-390 ,Social sciences (General) ,H1-99 - Abstract
Research into the pulmonary function of patients with transfusion-dependent thalassemia (TDT) is limited, with existing studies presenting conflicting results. We carried out a retrospective study involving 140 patients with TDT. The mean patient age was 8.7 ± 3.2 years, with a median serum ferritin (SF) level of 3791.4 ng/ml (IQR: 2424.1–5733.3 ng/ml). Pulmonary function abnormalities were detected in 46.43 % (65 out of 140) of patients, primarily manifesting as diffusion dysfunction (26.43 %), followed by ventilatory dysfunction (5.0 %), and mixed pulmonary dysfunction (15.0 %). A serum ferritin level above 2500 ng/ml significantly correlated with the occurrence of these abnormalities(OR = 3.187, 95%CI:1.312–7.741, P = 0.010), while higher hemoglobin concentrations demonstrated a protective effect (OR = 0.966, 95%CI: 0.943–0.989, P = 0.004). Our study highlights diffusion dysfunction as the most prevalent type of pulmonary function abnormalities in TDT patients. Furthermore, it establishes a correlation between elevated serum ferritin levels and pulmonary dysfunction.
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- 2024
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100. Postpartum Renal Cortical Necrosis: A Case Series
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Lei Jiang, Suxia Wang, Ying Tan, and Tao Su
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Acute kidney injury ,atypical hemolytic uremic syndrome (aHUS) ,pathology ,postpartum ,renal cortical necrosis ,segmental sclerosis ,Diseases of the genitourinary system. Urology ,RC870-923 - Abstract
Rationale & Objective: Postpartum renal cortical necrosis (postpartum RCN) is a severe form of obstetric acute kidney injury. This study aimed to identify clinicopathologic features in Chinese postpartum RCN cases to determine how pathologic findings may contribute to the treatment and prognosis. Study Design: Single-center, case series. Setting & Participants: Twelve patients with postpartum RCN had kidney biopsies at Peking University First Hospital between 2014 and 2021. The diagnosis of postpartum RCN was made according to typical magnetic resonance imaging or pathologic features. Clinical, laboratory, and pathologic data were compared between patients with estimated glomerular filtration rate
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- 2024
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