101. Fecal Sample Collection Method for Wild Birds-Associated Microbiome Research: Perspectives for Wildlife Studies
- Author
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Adriano Minichino, Alessandro Fioretti, Luca Borrelli, Ludovico Dipineto, Antonino Pace, Borrelli, Luca, Minichino, Adriano, Pace, Antonino, Dipineto, Ludovico, and Fioretti, Alessandro
- Subjects
Ecology (disciplines) ,wildlife ,Wildlife ,collecting box ,microbiome ,Biology ,03 medical and health sciences ,lcsh:Zoology ,Technical Note ,Microbiome ,lcsh:QL1-991 ,Feces ,030304 developmental biology ,Cloacal swab ,0303 health sciences ,noninvasive method ,lcsh:Veterinary medicine ,General Veterinary ,030306 microbiology ,Ecology ,birds feces ,birds feces, collecting box, microbiome, noninvasive method, wildlife ,Metabolic regulation ,Research studies ,lcsh:SF600-1100 ,Animal Science and Zoology ,Sample collection - Abstract
Simple Summary This paper describes an easy-to-build box for the noninvasive collection of feces from wild birds or small wild animals (up to 1 kg), including a plastic storage box, a plastic tray, and a vinyl-coated hardware cloth. This method could minimize potential contamination and allow for cross-study comparisons on gut microbiomes for wildlife medicine, conservation, ecology, and evolutionary biology. Abstract Gut microbial communities play important roles in host health, modulating development, nutrient acquisition, immune and metabolic regulation, behavior and diseases. Wildlife microbiome studies and host–microbe interaction and exploration might be an important goal for evolutionary biology, conservation, and ecology. Therefore, collection and sampling methods must be considered before choosing a microbiome-based research plan. Since the fecal microbial community reflects the true gut community better than that of cloacal swab samples and only few nondestructive methods have been described, we propose an easy-to-build box for a noninvasive fecal collection method. The main components of the collection box include a plastic storage box, a plastic tray, a vinyl-coated hardware cloth, and a 10% bleach solution. In the plastic box, the tray is positioned under the raised grate, where the bird is placed, to reduce the risk of contamination of the fecal samples. This procedure could simplify handling and processing phases in wild birds or other animals. It might represent a cheap and useful method for research studies, wildlife rescue center activities, veterinary practices, and conservation practitioners.
- Published
- 2020