101. Molecular Composition of Genomic TMPRSS2-ERG Rearrangements in Prostate Cancer
- Author
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Helge Taubert, Arndt Hartmann, Manuela Krumbholz, Maximilian Burger, Robert Stoehr, Sven Wach, Markus Metzler, Bernd Wullich, and Abbas Agaimy
- Subjects
Male ,0301 basic medicine ,Oncogene Proteins, Fusion ,Article Subject ,Clinical Biochemistry ,TMPRSS2 ,Fusion gene ,03 medical and health sciences ,Prostate cancer ,0302 clinical medicine ,Prostate ,Cell Line, Tumor ,Biomarkers, Tumor ,Genetics ,Humans ,Medicine ,Precision Medicine ,Child ,Molecular Biology ,Aged ,Repetitive Sequences, Nucleic Acid ,Tumor marker ,lcsh:R5-920 ,business.industry ,Biochemistry (medical) ,Breakpoint ,Prostatic Neoplasms ,General Medicine ,Middle Aged ,medicine.disease ,Leukemia ,030104 developmental biology ,medicine.anatomical_structure ,030220 oncology & carcinogenesis ,Cancer research ,Sarcoma ,lcsh:Medicine (General) ,business ,Cell-Free Nucleic Acids ,Neoplasms, Connective and Soft Tissue ,Research Article - Abstract
There is increasing interest in the use of cell-free circulating tumor DNA (ctDNA) as a serum marker for therapy assessment in prostate cancer patients. Prostate cancer is characterized by relatively low numbers of mutations, and, in contrast to many other common epithelial cancers, commercially available single nucleotide mutation assays for quantification of ctDNA are insufficient for therapy assessment in this disease. However, prostate cancer shares some similarity with translocation-affected mesenchymal tumors (e.g., leukemia and Ewing sarcoma), which are common in pediatric oncology, where chromosomal translocations are used as biomarkers for quantification of the tumor burden. Approximately 50% of prostate cancers carry a chromosomal translocation resulting in generation of the TMPRSS2-ERG fusion gene, which is unique to the tumor cells of each individual patient because of variability in the fusion breakpoint sites. In the present study, we examined the structural preconditions for TMPRSS2-ERG fusion sites in comparison with mesenchymal tumors in pediatric patients to determine whether the sequence composition is suitable for the establishment of tumor-specific quantification assays in prostate cancer patients. Genomic repeat elements represent potential obstacles to establishment of quantification assays, and we found similar proportions of repeat elements at fusion sites in prostate cancer to those reported for mesenchymal tumors, where genomic fusion sequences are established as biomarkers. Our data support the development of the TMPRSS2-ERG fusion gene as a noninvasive tumor marker for therapy assessment, risk stratification, and relapse detection to improve personalized therapy strategies for patients with prostate cancer.
- Published
- 2019
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