266 results on '"P. Sartoretti"'
Search Results
102. Pseudoprogression prediction in high grade primary CNS tumors by use of radiomics
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Ari, Asena Petek, Akkurt, Burak Han, Musigmann, Manfred, Mammadov, Orkhan, Blömer, David A., Kasap, Dilek N. G., Henssen, Dylan J. H. A., Nacul, Nabila Gala, Sartoretti, Elisabeth, Sartoretti, Thomas, Backhaus, Philipp, Thomas, Christian, Stummer, Walter, Heindel, Walter, and Mannil, Manoj
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- 2022
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103. Assessing preoperative risk of STR in skull meningiomas using MR radiomics and machine learning
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Manfred Musigmann, Burak Han Akkurt, Hermann Krähling, Benjamin Brokinkel, Dylan J. H. A. Henssen, Thomas Sartoretti, Nabila Gala Nacul, Walter Stummer, Walter Heindel, and Manoj Mannil
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Medicine ,Science - Abstract
Abstract Our aim is to predict possible gross total and subtotal resections of skull meningiomas from pre-treatment T1 post contrast MR-images using radiomics and machine learning in a representative patient cohort. We analyse the accuracy of our model predictions depending on the tumor location within the skull and the postoperative tumor volume. In this retrospective, IRB-approved study, image segmentation of the contrast enhancing parts of the tumor was semi-automatically performed using the 3D Slicer open-source software platform. Imaging data were split into training data and independent test data at random. We extracted a total of 107 radiomic features by hand-delineated regions of interest on T1 post contrast MR images. Feature preselection and model construction were performed with eight different machine learning algorithms. Each model was estimated 100 times on new training data and then tested on a previously unknown, independent test data set to avoid possible overfitting. Our cohort included 138 patients. A gross total resection of the meningioma was performed in 107 cases and a subtotal resection in the remaining 31 cases. Using the training data, the mean area under the curve (AUC), mean accuracy, mean kappa, mean sensitivity and mean specificity were 0.901, 0.875, 0.629, 0.675 and 0.933 respectively. We obtained very similar results with the independent test data: mean AUC = 0.900, mean accuracy = 0.881, mean kappa = 0.644, mean sensitivity = 0.692 and mean specificity = 0.936. Thus, our model exposes good and stable predictive performance with both training and test data. Our radiomics approach shows that with machine learning algorithms and comparatively few explanatory factors such as the location of the tumor within the skull as well as its shape, it is possible to make accurate predictions about whether a meningioma can be completely resected by surgery. Complete resections and resections with larger postoperative tumor volumes can be predicted with very high accuracy. However, cases with very small postoperative tumor volumes are comparatively difficult to predict correctly.
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- 2022
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104. Testing the applicability and performance of Auto ML for potential applications in diagnostic neuroradiology
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Manfred Musigmann, Burak Han Akkurt, Hermann Krähling, Nabila Gala Nacul, Luca Remonda, Thomas Sartoretti, Dylan Henssen, Benjamin Brokinkel, Walter Stummer, Walter Heindel, and Manoj Mannil
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Medicine ,Science - Abstract
Abstract To investigate the applicability and performance of automated machine learning (AutoML) for potential applications in diagnostic neuroradiology. In the medical sector, there is a rapidly growing demand for machine learning methods, but only a limited number of corresponding experts. The comparatively simple handling of AutoML should enable even non-experts to develop adequate machine learning models with manageable effort. We aim to investigate the feasibility as well as the advantages and disadvantages of developing AutoML models compared to developing conventional machine learning models. We discuss the results in relation to a concrete example of a medical prediction application. In this retrospective IRB-approved study, a cohort of 107 patients who underwent gross total meningioma resection and a second cohort of 31 patients who underwent subtotal resection were included. Image segmentation of the contrast enhancing parts of the tumor was performed semi-automatically using the open-source software platform 3D Slicer. A total of 107 radiomic features were extracted by hand-delineated regions of interest from the pre-treatment MRI images of each patient. Within the AutoML approach, 20 different machine learning algorithms were trained and tested simultaneously. For comparison, a neural network and different conventional machine learning algorithms were trained and tested. With respect to the exemplary medical prediction application used in this study to evaluate the performance of Auto ML, namely the pre-treatment prediction of the achievable resection status of meningioma, AutoML achieved remarkable performance nearly equivalent to that of a feed-forward neural network with a single hidden layer. However, in the clinical case study considered here, logistic regression outperformed the AutoML algorithm. Using independent test data, we observed the following classification results (AutoML/neural network/logistic regression): mean area under the curve = 0.849/0.879/0.900, mean accuracy = 0.821/0.839/0.881, mean kappa = 0.465/0.491/0.644, mean sensitivity = 0.578/0.577/0.692 and mean specificity = 0.891/0.914/0.936. The results obtained with AutoML are therefore very promising. However, the AutoML models in our study did not yet show the corresponding performance of the best models obtained with conventional machine learning methods. While AutoML may facilitate and simplify the task of training and testing machine learning algorithms as applied in the field of neuroradiology and medical imaging, a considerable amount of expert knowledge may still be needed to develop models with the highest possible discriminatory power for diagnostic neuroradiology.
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- 2022
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105. Direct communication between radiologists and patients improves the quality of imaging reports
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Gutzeit, Andreas, Sartoretti, Elisabeth, Reisinger, Clemens, Blautzik, Janusch, Sartoretti-Schefer, Sabine, Kos, Sebastian, Fischmann, Arne, Donners, Ricardo, Harder, Dorothee, Meissnitzer, Matthias, Hergan, Klaus, Largiadèr, Selina, Forstner, Rosemarie, Froehlich, Johannes M., Reischauer, Carolin, Matoori, Simon, Koh, Dow Mu, and Sartoretti, Thomas
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- 2021
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106. Legged robots for object manipulation: A review
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Yifeng Gong, Ge Sun, Aditya Nair, Aditya Bidwai, Raghuram CS, John Grezmak, Guillaume Sartoretti, and Kathryn A. Daltorio
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multilegged robots ,mobile manipulation ,legs as grippers and other end-effectors ,mechanism design of mobile robots ,legged robots for object manipulation: a review ,Mechanical engineering and machinery ,TJ1-1570 - Abstract
Legged robots can have a unique role in manipulating objects in dynamic, human-centric, or otherwise inaccessible environments. Although most legged robotics research to date typically focuses on traversing these challenging environments, many legged platform demonstrations have also included “moving an object” as a way of doing tangible work. Legged robots can be designed to manipulate a particular type of object (e.g., a cardboard box, a soccer ball, or a larger piece of furniture), by themselves or collaboratively. The objective of this review is to collect and learn from these examples, to both organize the work done so far in the community and highlight interesting open avenues for future work. This review categorizes existing works into four main manipulation methods: object interactions without grasping, manipulation with walking legs, dedicated non-locomotive arms, and legged teams. Each method has different design and autonomy features, which are illustrated by available examples in the literature. Based on a few simplifying assumptions, we further provide quantitative comparisons for the range of possible relative sizes of the manipulated object with respect to the robot. Taken together, these examples suggest new directions for research in legged robot manipulation, such as multifunctional limbs, terrain modeling, or learning-based control, to support a number of new deployments in challenging indoor/outdoor scenarios in warehouses/construction sites, preserved natural areas, and especially for home robotics.
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- 2023
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107. Gaia Data Release 1. Testing the parallaxes with local Cepheids and RR Lyrae stars
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Gaia Collaboration, Clementini, G., Eyer, L., Ripepi, V., Marconi, M., Muraveva, T., Garofalo, A., Sarro, L. M., Palmer, M., Luri, X., Molinaro, R., Rimoldini, L., Szabados, L., Musella, I., Anderson, R. I., Prusti, T., de Bruijne, J. H. J., Brown, A. G. A., Vallenari, A., Babusiaux, C., Bailer-Jones, C. A. L., Bastian, U., Biermann, M., Evans, D. W., Jansen, F., Jordi, C., Klioner, S. A., Lammers, U., Lindegren, L., Mignard, F., Panem, C., Pourbaix, D., Randich, S., Sartoretti, P., Siddiqui, H. I., Soubiran, C., Valette, V., van Leeuwen, F., Walton, N. A., Aerts, C., Arenou, F., Cropper, M., Drimmel, R., Høg, E., Katz, D., Lattanzi, M. G., O'Mullane, W., Grebel, E. K., Holland, A. D., Huc, C., Passot, X., Perryman, M., Bramante, L., Cacciari, C., Castañeda, J., Chaoul, L., Cheek, N., De Angeli, F., Fabricius, C., Guerra, R., Hernández, J., Jean-Azntoine-Piccolo, A., Masana, E., Messineo, R., Mowlavi, N., Nienartowicz, K., Ordóñez-Blanco, D., Panuzzo, P., Portell, J., Richards, P. J., Riello, M., Seabroke, G. M., Tanga, P., Thévenin, F., Torra, J., Els, S. G., Gracia-Abril, G., Comoretto, G., Garcia-Reinaldos, M., Lock, T., Mercier, E., Altmann, M., Andrae, R., Astraatmadja, T. L., Bellas-Velidis, I., Benson, K., Berthier, J., Blomme, R., Busso, G., Carry, B., Cellino, A., Cowell, S., Creevey, O., Cuypers, J., Davidson, M., De Ridder, J., de Torres, A., Delchambre, L., Dell'Oro, A., Ducourant, C., Frémat, Y., García-Torres, M., Gosset, E., Halbwachs, J. -L., Hambly, N. C., Harrison, D. L., Hauser, M., Hestroffer, D., Hodgkin, S. T., Huckle, H. E., Hutton, A., Jasniewicz, G., Jordan, S., Kontizas, M., Korn, A. J., Lanzafame, A. C., Manteiga, M., Moitinho, A., Muinonen, K., Osinde, J., Pancino, E., Pauwels, T., Petit, J. -M., Recio-Blanco, A., Robin, A. C., Siopis, C., Smith, M., Smith, K. W., Sozzetti, A., Thuillot, W., van Reeven, W., Viala, Y., Abbas, U., Aramburu, A. Abreu, Accart, S., Aguado, J. J., Allan, P. M., Allasia, W., Altavilla, G., Álvarez, M. A., Alves, J., Andrei, A. H., Varela, E. Anglada, Antiche, E., Antoja, T., Antón, S., Arcay, B., Bach, N., Baker, S. G., Balaguer-Núñez, L., Barache, C., Barata, C., Barbier, A., Barblan, F., Navascués, D. Barrado y, Barros, M., Barstow, M. A., Becciani, U., Bellazzini, M., García, A. Bello, Belokurov, V., Bendjoya, P., Berihuete, A., Bianchi, L., Bienaymé, O., Billebaud, F., Blagorodnova, N., Blanco-Cuaresma, S., Boch, T., Bombrun, A., Borrachero, R., Bouquillon, S., Bourda, G., Bouy, H., Bragaglia, A., Breddels, M. A., Brouillet, N., Brüsemeister, T., Bucciarelli, B., Burgess, P., Burgon, R., Burlacu, A., Busonero, D., Buzzi, R., Caffau, E., Cambras, J., Campbell, H., Cancelliere, R., Cantat-Gaudin, T., Carlucci, T., Carrasco, J. M., Castellani, M., Charlot, P., Charnas, J., Chiavassa, A., Clotet, M., Cocozza, G., Collins, R. S., Costigan, G., Crifo, F., Cross, N. J. G., Crosta, M., Crowley, C., Dafonte, C., Damerdji, Y., Dapergolas, A., David, P., David, M., De Cat, P., de Felice, F., de Laverny, P., De Luise, F., De March, R., de Souza, R., Debosscher, J., del Pozo, E., Delbo, M., Delgado, A., Delgado, H. E., Di Matteo, P., Diakite, S., Distefano, E., Dolding, C., Anjos, S. Dos, Drazinos, P., Durán, J., Dzigan, Y., Edvardsson, B., Enke, H., Evans, N. W., Bontemps, G. Eynard, Fabre, C., Fabrizio, M., Faigler, S., Falcão, A. J., Casas, M. Farràs, Federici, L., Fedorets, G., Fernández-Hernánde, J., Fernique, P., Fienga, A., Figueras, F., Filippi, F., Findeisen, K., Fonti, A., Fouesneau, M., Fraile, E., Fraser, M., Fuchs, J., Gai, M., Galleti, S., Galluccio, L., Garabato, D., García-Sedano, F., Garralda, N., Gavras, P., Gerssen, J., Geyer, R., Gilmore, G., Girona, S., Giuffrida, G., Gomes, M., González-Marcos, A., González-Núñez, J., González-Vidal, J. J., Granvik, M., Guerrier, A., Guillout, P., Guiraud, J., Gúrpide, A., Gutiérrez-Sánchez, R., Guy, L. P., Haigron, R., Hatzidimitriou, D., Haywood, M., Heiter, U., Helmi, A., Hobbs, D., Hofmann, W., Holl, B., Holland, G., Hunt, J. A. S., Hypki, A., Icardi, V., Irwin, M., de Fombelle, G. Jevardat, Jofré, P., Jonker, P. G., Jorissen, A., Julbe, F., Karampelas, A., Kochoska, A., Kohley, R., Kolenberg, K., Kontizas, E., Koposov, S. E., Kordopatis, G., Koubsky, P., Krone-Martins, A., Kudryashova, M., Kull, I., Bachchan, R. K., Lacoste-Seris, F., Lanza, A. F., Lavigne, J. -B., Poncin-Lafitte, C. Le, Lebreton, Y., Lebzelter, T., Leccia, S., Leclerc, N., Lecoeur-Taibi, I., Lemaitre, V., Lenhardt, H., Leroux, F., Liao, S., Licata, E., Lindstrøm, H. E. P., Lister, T. A., Livanou, E., Lobel, A., Löffler, W., López, M., Lorenz, D., MacDonald, I., Fernandes, T. Magalhães, Managau, S., Mann, R. G., Mantelet, G., Marchal, O., Marchant, J. M., Marinoni, S., Marrese, P. M., Marschalkó, G., Marshall, D. J., Martín-Fleitas, J. M., Martino, M., Mary, N., Matijevič, G., Mazeh, T., McMillan, P. J., Messina, S., Michalik, D., Millar, N. R., Miranda, B. M. H., Molina, D., Molinaro, M., Molnár, L., Moniez, M., Montegriffo, P., Mor, R., Mora, A., Morbidelli, R., Morel, T., Morgenthaler, S., Morris, D., Mulone, A. F., Narbonne, J., Nelemans, G., Nicastro, L., Noval, L., Ordénovic, C., Ordieres-Meré, J., Osborne, P., Pagani, C., Pagano, I., Pailler, F., Palacin, H., Palaversa, L., Parsons, P., Pecoraro, M., Pedrosa, R., Pentikäinen, H., Pichon, B., Piersimoni, A. M., Pineau, F. -X., Plachy, E., Plum, G., Poujoulet, E., Prša, A., Pulone, L., Ragaini, S., Rago, S., Rambaux, N., Ramos-Lerate, M., Ranalli, P., Rauw, G., Read, A., Regibo, S., Reylé, C., Ribeiro, R. A., Riva, A., Rixon, G., Roelens, M., Romero-Gómez, M., Rowell, N., Royer, F., Ruiz-Dern, L., Sadowski, G., Sellés, T. Sagristà, Sahlmann, J., Salgado, J., Salguero, E., Sarasso, M., Savietto, H., Schultheis, M., Sciacca, E., Segol, M., Segovia, J. C., Segransan, D., Shih, I-C., Smareglia, R., Smart, R. L., Solano, E., Solitro, F., Sordo, R., Nieto, S. Soria, Souchay, J., Spagna, A., Spoto, F., Stampa, U., Steele, I. A., Steidelmüller, H., Stephenson, C. A., Stoev, H., Suess, F. F., Süveges, M., Surdej, J., Szegedi-Elek, E., Tapiador, D., Taris, F., Tauran, G., Taylor, M. B., Teixeira, R., Terrett, D., Tingley, B., Trager, S. C., Turon, C., Ulla, A., Utrilla, E., Valentini, G., van Elteren, A., Van Hemelryck, E., van Leeuwen, M., Varadi, M., Vecchiato, A., Veljanoski, J., Via, T., Vicente, D., Vogt, S., Voss, H., Votruba, V., Voutsinas, S., Walmsley, G., Weiler, M., Weingrill, K., Wevers, T., Wyrzykowski, Ł., Yoldas, A., Žerjal, M., Zucker, S., Zurbach, C., Zwitter, T., Alecu, A., Allen, M., Prieto, C. Allende, Amorim, A., Anglada-Escudé, G., Arsenijevic, V., Azaz, S., Balm, P., Beck, M., Bernstein, H. -H., Bigot, L., Bijaoui, A., Blasco, C., Bonfigli, M., Bono, G., Boudreault, S., Bressan, A., Brown, S., Brunet, P. -M., Bunclark, P., Buonanno, R., Butkevich, A. G., Carret, C., Carrion, C., Chemin, L., Chéreau, F., Corcione, L., Darmigny, E., de Boer, K. S., de Teodoro, P., de Zeeuw, P. T., Luche, C. Delle, Domingues, C. D., Dubath, P., Fodor, F., Frézouls, B., Fries, A., Fustes, D., Fyfe, D., Gallardo, E., Gallegos, J., Gardiol, D., Gebran, M., Gomboc, A., Gómez, A., Grux, E., Gueguen, A., Heyrovsky, A., Hoar, J., Iannicola, G., Parache, Y. Isasi, Janotto, A. -M., Joliet, E., Jonckheere, A., Keil, R., Kim, D. -W., Klagyivik, P., Klar, J., Knude, J., Kochukhov, O., Kolka, I., Kos, J., Kutka, A., Lainey, V., LeBouquin, D., Liu, C., Loreggia, D., Makarov, V. V., Marseille, M. G., Martayan, C., Martinez-Rubi, O., Massart, B., Meynadier, F., Mignot, S., Munari, U., Nguyen, A. -T., Nordlander, T., O'Flaherty, K. S., Ocvirk, P., Sanz, A. Olias, Ortiz, P., Osorio, J., Oszkiewicz, D., Ouzounis, A., Park, P., Pasquato, E., Peltzer, C., Peralta, J., Péturaud, F., Pieniluoma, T., Pigozzi, E., Poels, J., Prat, G., Prod'homme, T., Raison, F., Rebordao, J. M., Risquez, D., Rocca-Volmerange, B., Rosen, S., Ruiz-Fuertes, M. I., Russo, F., Sembay, S., Vizcaino, I. Serraller, Short, A., Siebert, A., Silva, H., Sinachopoulos, D., Slezak, E., Soffel, M., Sosnowska, D., Straižys, V., ter Linden, M., Terrell, D., Theil, S., Tiede, C., Troisi, L., Tsalmantza, P., Tur, D., Vaccari, M., Vachier, F., Valles, P., Van Hamme, W., Veltz, L., Virtanen, J., Wallut, J. -M., Wichmann, R., Wilkinson, M. I., Ziaeepour, H., and Zschocke, S.
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Astrophysics - Solar and Stellar Astrophysics ,Astrophysics - Astrophysics of Galaxies - Abstract
Parallaxes for 331 classical Cepheids, 31 Type II Cepheids and 364 RR Lyrae stars in common between Gaia and the Hipparcos and Tycho-2 catalogues are published in Gaia Data Release 1 (DR1) as part of the Tycho-Gaia Astrometric Solution (TGAS). In order to test these first parallax measurements of the primary standard candles of the cosmological distance ladder, that involve astrometry collected by Gaia during the initial 14 months of science operation, we compared them with literature estimates and derived new period-luminosity ($PL$), period-Wesenheit ($PW$) relations for classical and Type II Cepheids and infrared $PL$, $PL$-metallicity ($PLZ$) and optical luminosity-metallicity ($M_V$-[Fe/H]) relations for the RR Lyrae stars, with zero points based on TGAS. The new relations were computed using multi-band ($V,I,J,K_{\mathrm{s}},W_{1}$) photometry and spectroscopic metal abundances available in the literature, and applying three alternative approaches: (i) by linear least squares fitting the absolute magnitudes inferred from direct transformation of the TGAS parallaxes, (ii) by adopting astrometric-based luminosities, and (iii) using a Bayesian fitting approach. TGAS parallaxes bring a significant added value to the previous Hipparcos estimates. The relations presented in this paper represent first Gaia-calibrated relations and form a "work-in-progress" milestone report in the wait for Gaia-only parallaxes of which a first solution will become available with Gaia's Data Release 2 (DR2) in 2018., Comment: 29 pages, 25 figures. Accepted for publication by A&A
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- 2017
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108. HIP 21539 is not a past very close neighbour of the Sun
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Crifo, F., Soubiran, C., Jasniewicz, G., Katz, D., Sartoretti, P., and Panuzzo, P.
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Astrophysics - Solar and Stellar Astrophysics - Abstract
Aims: A previous study claimed that the star HIP 21539 passed close to the Sun, at a distance of 1.9 pc, around 0.14 Myr ago. We show that this is not the case. Methods: We redetermined the trajectory of the star relative to the Sun using a new accurate radial velocity from the HARPS spectrograph combined with the recent Gaia-TGAS astrometry. Results: With this new data, the closest approach of HIP 21539 to the Sun is now 17 pc, instead of 1.9 pc. Conclusions: At this distance, the star has not perturbed the Oort cloud., Comment: 2 pages, accepted as a Letter by A&A
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- 2017
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109. Gaia Data Release 1. Open cluster astrometry: performance, limitations, and future prospects
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Gaia Collaboration, van Leeuwen, F., Vallenari, A., Jordi, C., Lindegren, L., Bastian, U., Prusti, T., de Bruijne, J. H. J., Brown, A. G. A., Babusiaux, C., Bailer-Jones, C. A. L., Biermann, M., Evans, D. W., Eyer, L., Jansen, F., Klioner, S. A., Lammers, U., Luri, X., Mignard, F., Panem, C., Pourbaix, D., Randich, S., Sartoretti, P., Siddiqui, H. I., Soubiran, C., Valette, V., Walton, N. A., Aerts, C., Arenou, F., Cropper, M., Drimmel, R., Høg, E., Katz, D., Lattanzi, M. G., O'Mullane, W., Grebel, E. K., Holland, A. D., Huc, C., Passot, X., Perryman, M., Bramante, L., Cacciari, C., Castañeda, J., Chaoul, L., Cheek, N., De Angeli, F., Fabricius, C., Guerra, R., Hernández, J., Jean-Antoine-Piccolo, A., Masana, E., Messineo, R., Mowlavi, N., Nienartowicz, K., Ordóñez-Blanco, D., Panuzzo, P., Portell, J., Richards, P. J., Riello, M., Seabroke, G. M., Tanga, P., Thévenin, F., Torra, J., Els, S. G., Gracia-Abril, G., Comoretto, G., Garcia-Reinaldos, M., Lock, T., Mercier, E., Altmann, M., Andrae, R., Astraatmadja, T. L., Bellas-Velidis, I., Benson, K., Berthier, J., Blomme, R., Busso, G., Carry, B., Cellino, A., Clementini, G., Cowell, S., Creevey, O., Cuypers, J., Davidson, M., De Ridder, J., de Torres, A., Delchambre, L., Dell'Oro, A., Ducourant, C., Frémat, Y., García-Torres, M., Gosset, E., Halbwachs, J. -L., Hambly, N. C., Harrison, D. L., Hauser, M., Hestroffer, D., Hodgkin, S. T., Huckle, H. E., Hutton, A., Jasniewicz, G., Jordan, S., Kontizas, M., Korn, A. J., Lanzafame, A. C., Manteiga, M., Moitinho, A., Muinonen, K., Osinde, J., Pancino, E., Pauwels, T., Petit, J. -M., Recio-Blanco, A., Robin, A. C., Sarro, L. M., Siopis, C., Smith, M., Smith, K. W., Sozzetti, A., Thuillot, W., van Reeven, W., Viala, Y., Abbas, U., Aramburu, A. Abreu, Accart, S., Aguado, J. J., Allan, P. M., Allasia, W., Altavilla, G., Álvarez, M. A., Alves, J., Anderson, R. I., Andrei, A. H., Varela, E. Anglada, Antiche, E., Antoja, T., Antón, S., Arcay, B., Bach, N., Baker, S. G., Balaguer-Núñez, L., Barache, C., Barata, C., Barbier, A., Barblan, F., Navascués, D. Barrado y, Barros, M., Barstow, M. A., Becciani, U., Bellazzini, M., García, A. Bello, Belokurov, V., Bendjoya, P., Berihuete, A., Bianchi, L., Bienaymé, O., Billebaud, F., Blagorodnova, N., Blanco-Cuaresma, S., Boch, T., Bombrun, A., Borrachero, R., Bouquillon, S., Bourda, G., Bouy, H., Bragaglia, A., Breddels, M. A., Brouillet, N., Brüsemeister, T., Bucciarelli, B., Burgess, P., Burgon, R., Burlacu, A., Busonero, D., Buzzi, R., Caffau, E., Cambras, J., Campbell, H., Cancelliere, R., Cantat-Gaudin, T., Carlucci, T., Carrasco, J. M., Castellani, M., Charlot, P., Charnas, J., Chiavassa, A., Clotet, M., Cocozza, G., Collins, R. S., Costigan, G., Crifo, F., Cross, N. J. G., Crosta, M., Crowley, C., Dafonte, C., Damerdji, Y., Dapergolas, A., David, P., David, M., De Cat, P., de Felice, F., de Laverny, P., De Luise, F., De March, R., de Martino, D., de Souza, R., Debosscher, J., del Pozo, E., Delbo, M., Delgado, A., Delgado, H. E., Di Matteo, P., Diakite, S., Distefano, E., Dolding, C., Anjos, S. Dos, Drazinos, P., Durán, J., Dzigan, Y., Edvardsson, B., Enke, H., Evans, N. W., Bontemps, G. Eynard, Fabre, C., Fabrizio, M., Faigler, S., Falcão, A. J., Casas, M. Farràs, Federici, L., Fedorets, G., Fernández-Hernández, J., Fernique, P., Fienga, A., Figueras, F., Filippi, F., Findeisen, K., Fonti, A., Fouesneau, M., Fraile, E., Fraser, M., Fuchs, J., Gai, M., Galleti, S., Galluccio, L., Garabato, D., García-Sedano, F., Garofalo, A., Garralda, N., Gavras, P., Gerssen, J., Geyer, R., Gilmore, G., Girona, S., Giuffrida, G., Gomes, M., González-Marcos, A., González-Núñez, J., González-Vidal, J. J., Granvik, M., Guerrier, A., Guillout, P., Guiraud, J., Gúrpide, A., Gutiérrez-Sánchez, R., Guy, L. P., Haigron, R., Hatzidimitriou, D., Haywood, M., Heiter, U., Helmi, A., Hobbs, D., Hofmann, W., Holl, B., Holland, G., Hunt, J. A. S., Hypki, A., Icardi, V., Irwin, M., de Fombelle, G. Jevardat, Jofré, P., Jonker, P. G., Jorissen, A., Julbe, F., Karampelas, A., Kochoska, A., Kohley, R., Kolenberg, K., Kontizas, E., Koposov, S. E., Kordopatis, G., Koubsky, P., Krone-Martins, A., Kudryashova, M., Kull, I., Bachchan, R. K., Lacoste-Seris, F., Lanza, A. F., Lavigne, J. -B., Poncin-Lafitte, C. Le, Lebreton, Y., Lebzelter, T., Leccia, S., Leclerc, N., Lecoeur-Taibi, I., Lemaitre, V., Lenhardt, H., Leroux, F., Liao, S., Licata, E., Lindstrøm, H. E. P., Lister, T. A., Livanou, E., Lobel, A., Löffer, W., López, M., Lorenz, D., MacDonald, I., Fernandes, T. Magalhães, Managau, S., Mann, R. G., Mantelet, G., Marchal, O., Marchant, J. M., Marconi, M., Marinoni, S., Marrese, P. M., Marschalkó, G., Marshall, D. J., Martín-Fleitas, J. M., Martino, M., Mary, N., Matijevič, G., Mazeh, T., McMillan, P. J., Messina, S., Michalik, D., Millar, N. R., Miranda, B. M. H., Molina, D., Molinaro, R., Molinaro, M., Molnár, L., Moniez, M., Montegrio, P., Mor, R., Mora, A., Morbidelli, R., Morel, T., Morgenthaler, S., Morris, D., Mulone, A. F., Muraveva, T., Musella, I., Narbonne, J., Nelemans, G., Nicastro, L., Noval, L., Ordénovic, C., Ordieres-Meré, J., Osborne, P., Pagani, C., Pagano, I., Pailler, F., Palacin, H., Palaversa, L., Parsons, P., Pecoraro, M., Pedrosa, R., Pentikäinen, H., Pichon, B., Piersimoni, A. M., Pineau, F. -X., Plachy, E., Plum, G., Poujoulet, E., Prša, A., Pulone, L., Ragaini, S., Rago, S., Rambaux, N., Ramos-Lerate, M., Ranalli, P., Rauw, G., Read, A., Regibo, S., Reylé, C., Ribeiro, R. A., Rimoldini, L., Ripepi, V., Riva, A., Rixon, G., Roelens, M., Romero-Gómez, M., Rowell, N., Royer, F., Ruiz-Dern, L., Sadowski, G., Sellés, T. Sagristà, Sahlmann, J., Salgado, J., Salguero, E., Sarasso, M., Savietto, H., Schultheis, M., Sciacca, E., Segol, M., Segovia, J. C., Segransan, D., Shih, I-C., Smareglia, R., Smart, R. L., Solano, E., Solitro, F., Sordo, R., Nieto, S. Soria, Souchay, J., Spagna, A., Spoto, F., Stampa, U., Steele, I. A., Steidelmüller, H., Stephenson, C. A., Stoev, H., Suess, F. F., Süveges, M., Surdej, J., Szabados, L., Szegedi-Elek, E., Tapiador, D., Taris, F., Tauran, G., Taylor, M. B., Teixeira, R., Terrett, D., Tingley, B., Trager, S. C., Turon, C., Ulla, A., Utrilla, E., Valentini, G., van Elteren, A., Van Hemelryck, E., van Leeuwen, M., Varadi, M., Vecchiato, A., Veljanoski, J., Via, T., Vicente, D., Vogt, S., Voss, H., Votruba, V., Voutsinas, S., Walmsley, G., Weiler, M., Weingril, K., Wevers, T., Wyrzykowski, Ł., Yoldas, A., Žerjal, M., Zucker, S., Zurbach, C., Zwitter, T., Alecu, A., Allen, M., Prieto, C. Allende, Amorim, A., Anglada-Escudé, G., Arsenijevic, V., Azaz, S., Balm, P., Beck, M., Bernsteiny, H. -H., Bigot, L., Bijaoui, A., Blasco, C., Bonfigli, M., Bono, G., Boudreault, S., Bressan, A., Brown, S., Brunet, P. -M., Bunclarky, P., Buonanno, R., Butkevich, A. G., Carret, C., Carrion, C., Chemin, L., Chéreau, F., Corcione, L., Darmigny, E., de Boer, K. S., de Teodoro, P., de Zeeuw, P. T., Luche, C. Delle, Domingues, C. D., Dubath, P., Fodor, F., Frézouls, B., Fries, A., Fustes, D., Fyfe, D., Gallardo, E., Gallegos, J., Gardio, D., Gebran, M., Gomboc, A., Gómez, A., Grux, E., Gueguen, A., Heyrovsky, A., Hoar, J., Iannicola, G., Parache, Y. Isasi, Janotto, A. -M., Joliet, E., Jonckheere, A., Keil, R., Kim, D. -W., Klagyivik, P., Klar, J., Knude, J., Kochukhov, O., Kolka, I., Kos, J., Kutka, A., Lainey, V., LeBouquin, D., Liu, C., Loreggia, D., Makarov, V. V., Marseille, M. G., Martayan, C., Martinez-Rubi, O., Massart, B., Meynadier, F., Mignot, S., Munari, U., Nguyen, A. -T., Nordlander, T., O'Flaherty, K. S., Ocvirk, P., Sanz, A. Olias, Ortiz, P., Osorio, J., Oszkiewicz, D., Ouzounis, A., Palmer, M., Park, P., Pasquato, E., Peltzer, C., Peralta, J., Péturaud, F., Pieniluoma, T., Pigozzi, E., Poelsy, J., Prat, G., Prod'homme, T., Raison, F., Rebordao, J. M., Risquez, D., Rocca-Volmerange, B., Rosen, S., Ruiz-Fuertes, M. I., Russo, F., Sembay, S., Vizcaino, I. Serraller, Short, A., Siebert, A., Silva, H., Sinachopoulos, D., Slezak, E., Soffel, M., Sosnowska, D., Straižys, V., ter Linden, M., Terrell, D., Theil, S., Tiede, C., Troisi, L., Tsalmantza, P., Tur, D., Vaccari, M., Vachier, F., Valles, P., Van Hamme, W., Veltz, L., Virtanen, J., Wallut, J. -M., Wichmann, R., Wilkinson, M. I., Ziaeepour, H., and Zschocke, S.
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Astrophysics - Solar and Stellar Astrophysics - Abstract
Context. The first Gaia Data Release contains the Tycho-Gaia Astrometric Solution (TGAS). This is a subset of about 2 million stars for which, besides the position and photometry, the proper motion and parallax are calculated using Hipparcos and Tycho-2 positions in 1991.25 as prior information. Aims. We investigate the scientific potential and limitations of the TGAS component by means of the astrometric data for open clusters. Methods. Mean cluster parallax and proper motion values are derived taking into account the error correlations within the astrometric solutions for individual stars, an estimate of the internal velocity dispersion in the cluster, and, where relevant, the effects of the depth of the cluster along the line of sight. Internal consistency of the TGAS data is assessed. Results. Values given for standard uncertainties are still inaccurate and may lead to unrealistic unit-weight standard deviations of least squares solutions for cluster parameters. Reconstructed mean cluster parallax and proper motion values are generally in very good agreement with earlier Hipparcos-based determination, although the Gaia mean parallax for the Pleiades is a significant exception. We have no current explanation for that discrepancy. Most clusters are observed to extend to nearly 15 pc from the cluster centre, and it will be up to future Gaia releases to establish whether those potential cluster-member stars are still dynamically bound to the clusters. Conclusions. The Gaia DR1 provides the means to examine open clusters far beyond their more easily visible cores, and can provide membership assessments based on proper motions and parallaxes. A combined HR diagram shows the same features as observed before using the Hipparcos data, with clearly increased luminosities for older A and F dwarfs., Comment: Accepted for publication by A&A. 21 pages main text plus 46 pages appendices. 34 figures main text, 38 figures appendices. 8 table in main text, 19 tables in appendices
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- 2017
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110. Gaia Data Release 1: Catalogue validation
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Arenou, F., Luri, X., Babusiaux, C., Fabricius, C., Helmi, A., Robin, A. C., Vallenari, A., Blanco-Cuaresma, S., Cantat-Gaudin, T., Findeisen, K., Reylé, C., Ruiz-Dern, L., Sordo, R., Turon, C., Walton, N. A., Shih, I-C., Antiche, E., Barache, C., Barros, M., Breddels, M., Carrasco, J. M., Costigan, G., Diakité, S., Eyer, L., Figueras, F., Galluccio, L., Heu, J., Jordi, C., Krone-Martins, A., Lallement, R., Lambert, S., Leclerc, N., Marrese, P. M., Moitinho, A., Mor, R., Romero-Gómez, M., Sartoretti, P., Soria, S., Soubiran, C., Souchay, J., Veljanoski, J., Ziaeepour, H., Giuffrida, G., Pancino, E., and Bragaglia, A.
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Astrophysics - Instrumentation and Methods for Astrophysics ,Astrophysics - Astrophysics of Galaxies ,Astrophysics - Solar and Stellar Astrophysics - Abstract
Before the publication of the Gaia Catalogue, the contents of the first data release have undergone multiple dedicated validation tests. These tests aim at analysing in-depth the Catalogue content to detect anomalies, individual problems in specific objects or in overall statistical properties, either to filter them before the public release, or to describe the different caveats of the release for an optimal exploitation of the data. Dedicated methods using either Gaia internal data, external catalogues or models have been developed for the validation processes. They are testing normal stars as well as various populations like open or globular clusters, double stars, variable stars, quasars. Properties of coverage, accuracy and precision of the data are provided by the numerous tests presented here and jointly analysed to assess the data release content. This independent validation confirms the quality of the published data, Gaia DR1 being the most precise all-sky astrometric and photometric catalogue to-date. However, several limitations in terms of completeness, astrometric and photometric quality are identified and described. Figures describing the relevant properties of the release are shown and the testing activities carried out validating the user interfaces are also described. A particular emphasis is made on the statistical use of the data in scientific exploitation., Comment: 34 pages, 52 figures, 3 tables. Submitted to A&A on Oct. 14 as part of the Gaia DR1 special issue, accepted with minor revisions on Dec. 19
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- 2017
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111. Radiomics for pseudoprogression prediction in high grade gliomas: added value of MR contrast agent
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Orkhan Mammadov, Burak Han Akkurt, Manfred Musigmann, Asena Petek Ari, David A. Blömer, Dilek N.G. Kasap, Dylan J.H.A. Henssen, Nabila Gala Nacul, Elisabeth Sartoretti, Thomas Sartoretti, Philipp Backhaus, Christian Thomas, Walter Stummer, Walter Heindel, and Manoj Mannil
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Artificial intelligence ,Glioma ,Patient outcome assessment ,Science (General) ,Q1-390 ,Social sciences (General) ,H1-99 - Abstract
Objective: Our aim is to define the capabilities of radiomics in predicting pseudoprogression from pre-treatment MR images in patients diagnosed with high-grade gliomas using T1 non-contrast-enhanced and contrast-enhanced images. Material & methods: In this retrospective IRB-approved study, image segmentation of high-grade gliomas was semi-automatically performed using 3D Slicer. Non-contrast-enhanced T1-weighted images and contrast-enhanced T1-weighted images were used prior to surgical therapy or radio-chemotherapy. Imaging data was split into a training sample and an independent test sample at random. We extracted 107 radiomic features by use of PyRadiomics. Feature selection and model construction were performed using Generalized Boosted Regression Models (GBM). Results: Our cohort included 124 patients (female: n = 53), diagnosed with progressive (n = 61) and pseudoprogressive disease (n = 63) of primary high-grade gliomas. Based on non-contrast-enhanced T1-weighted images of the independent test sample, the mean area under the curve (AUC), mean sensitivity, mean specificity and mean accuracy of our model were 0.651 [0.576, 0.761], 0.616 [0.417, 0.833], 0.578 [0.417, 0.750] and 0.597 [0.500, 0.708] to predict the development of pseudoprogression. In comparison, the independent test data of contrast-enhanced T1-weighted images yielded significantly higher values of AUC = 0.819 [0.760, 0.872], sensitivity = 0.817 [0.750, 0.833], specificity = 0.723 [0.583, 0.833] and accuracy = 0.770 [0.687, 0.833]. Conclusion: Our findings show that it is possible to predict pseudoprogression of high-grade gliomas with a Radiomics model using contrast-enhanced T1-weighted images with comparatively good discriminatory power. The use of a contrast agent results in a clear added value.
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- 2022
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112. Introduction and reproducibility of an updated practical grading system for lumbar foraminal stenosis based on high-resolution MR imaging
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Elisabeth Sartoretti, Michael Wyss, Alex Alfieri, Christoph A. Binkert, Cyril Erne, Sabine Sartoretti-Schefer, and Thomas Sartoretti
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Medicine ,Science - Abstract
Abstract In this paper we sought to develop and assess the reproducibility of an updated 6-point grading system for lumbar foraminal stenosis based on the widely used Lee classification that more accurately describes lumbar foraminal stenosis as seen on high-resolution MRI. Grade A indicates absence of foraminal stenosis. Grades B, C, D and E indicate presence of foraminal stenosis with contact of the nerve root with surrounding anatomical structures (on one, two, three or four sides for B, C, D and E respectively) yet without morphological change of the nerve root. To each grade, a number code indicating the location of contact between the nerve root and surrounding anatomical structure(s) is appended. 1, 2, 3 and 4 indicate contact of the nerve root at superior, posterior, inferior and anterior position of the borders of the lumbar foramen. Grade F indicates presence of foraminal stenosis with morphological change of the nerve root. Three readers graded the lumbar foramina of 101 consecutive patients using high-resolution T2w (and T1w) MR images with a spatial resolution of beyond 0.5 mm3. Interreader agreement was excellent (Cohen’s Kappa = 0.866–1). Importantly, 30.6%/31.6%/32.2% (reader 1/reader 2/ reader 3) of foramina were assigned grades that did not appear in the original Lee grading system (grades B and D). The readers found no foramen that could not be described accurately with the updated grading system. Thus, an updated 6-point grading system for lumbar foraminal stenosis is reproducible and comprehensively describes lumbar foraminal stenosis as seen on high-resolution MRI.
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- 2021
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113. Testing the applicability and performance of Auto ML for potential applications in diagnostic neuroradiology
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Musigmann, Manfred, Akkurt, Burak Han, Krähling, Hermann, Nacul, Nabila Gala, Remonda, Luca, Sartoretti, Thomas, Henssen, Dylan, Brokinkel, Benjamin, Stummer, Walter, Heindel, Walter, and Mannil, Manoj
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- 2022
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114. Assessing preoperative risk of STR in skull meningiomas using MR radiomics and machine learning
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Musigmann, Manfred, Akkurt, Burak Han, Krähling, Hermann, Brokinkel, Benjamin, Henssen, Dylan J. H. A., Sartoretti, Thomas, Nacul, Nabila Gala, Stummer, Walter, Heindel, Walter, and Mannil, Manoj
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- 2022
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115. Amide proton transfer weighted (APTw) imaging based radiomics allows for the differentiation of gliomas from metastases
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Elisabeth Sartoretti, Thomas Sartoretti, Michael Wyss, Carolin Reischauer, Luuk van Smoorenburg, Christoph A. Binkert, Sabine Sartoretti-Schefer, and Manoj Mannil
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Medicine ,Science - Abstract
Abstract We sought to evaluate the utility of radiomics for Amide Proton Transfer weighted (APTw) imaging by assessing its value in differentiating brain metastases from high- and low grade glial brain tumors. We retrospectively identified 48 treatment-naïve patients (10 WHO grade 2, 1 WHO grade 3, 10 WHO grade 4 primary glial brain tumors and 27 metastases) with either primary glial brain tumors or metastases who had undergone APTw MR imaging. After image analysis with radiomics feature extraction and post-processing, machine learning algorithms (multilayer perceptron machine learning algorithm; random forest classifier) with stratified tenfold cross validation were trained on features and were used to differentiate the brain neoplasms. The multilayer perceptron achieved an AUC of 0.836 (receiver operating characteristic curve) in differentiating primary glial brain tumors from metastases. The random forest classifier achieved an AUC of 0.868 in differentiating WHO grade 4 from WHO grade 2/3 primary glial brain tumors. For the differentiation of WHO grade 4 tumors from grade 2/3 tumors and metastases an average AUC of 0.797 was achieved. Our results indicate that the use of radiomics for APTw imaging is feasible and the differentiation of primary glial brain tumors from metastases is achievable with a high degree of accuracy.
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- 2021
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116. The Milky Way's halo in 6D: Gaia's Radial Velocity Spectrometer performance
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Seabroke, George, Cropper, Mark, Katz, David, Sartoretti, Paola, Panuzzo, Pasquale, Marchal, Olivier, Gueguen, Alain, Benson, Kevin, Dolding, Chris, Huckle, Howard, Smith, Mike, and Baker, Steve
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Astrophysics - Instrumentation and Methods for Astrophysics ,Astrophysics - Astrophysics of Galaxies - Abstract
Gaia's Radial Velocity Spectrometer (RVS) has been operating in routine phase for over one year since initial commissioning. RVS continues to work well but the higher than expected levels of straylight reduce the limiting magnitude. The end-of-mission radial-velocity (RV) performance requirement for G2V stars was 15 km/s at V = 16.5 mag. Instead, 15 km/s precision is achieved at 15 < V < 16 mag, consistent with simulations that predict a loss of 1.4 mag. Simulations also suggest that changes to Gaia's onboard software could recover ~0.14 mag of this loss. Consequently Gaia's onboard software was upgraded in April 2015. The status of this new commissioning period is presented, as well as the latest scientific performance of the on-ground processing of RVS spectra. We illustrate the implications of the RVS limiting magnitude on Gaia's view of the Milky Way's halo in 6D using the Gaia Universe Model Snapshot (GUMS)., Comment: 2 pages, 1 figure, "The General Assembly of Galaxy Halos: Structure, Origin and Evolution", Proceedings of the International Astronomical Union, IAU Symposium, Volume 317, pp. 346-347 (eds. A. Bragaglia, M. Arnaboldi, M. Rejkuba & D. Romano)
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- 2016
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117. Author Correction: Introduction and reproducibility of an updated practical grading system for lumbar foraminal stenosis based on high-resolution MR imaging
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Elisabeth Sartoretti, Michael Wyss, Alex Alfieri, Christoph A. Binkert, Cyril Erne, Sabine Sartoretti‑Schefer, and Thomas Sartoretti
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Medicine ,Science - Published
- 2021
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118. Introduction and reproducibility of an updated practical grading system for lumbar foraminal stenosis based on high-resolution MR imaging
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Sartoretti, Elisabeth, Wyss, Michael, Alfieri, Alex, Binkert, Christoph A., Erne, Cyril, Sartoretti-Schefer, Sabine, and Sartoretti, Thomas
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- 2021
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119. Amide proton transfer weighted (APTw) imaging based radiomics allows for the differentiation of gliomas from metastases
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Sartoretti, Elisabeth, Sartoretti, Thomas, Wyss, Michael, Reischauer, Carolin, van Smoorenburg, Luuk, Binkert, Christoph A., Sartoretti-Schefer, Sabine, and Mannil, Manoj
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- 2021
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120. Low-dose dual-energy CT for stone characterization: a systematic comparison of two generations of split-filter single-source and dual-source dual-energy CT
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Nakhostin, Dominik, Sartoretti, Thomas, Eberhard, Matthias, Krauss, Bernhard, Müller, Daniel, Alkadhi, Hatem, and Euler, André
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- 2021
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121. Structural MRI Reveals Cervical Spinal Cord Atrophy in the P301L Mouse Model of Tauopathy: Gender and Transgene-Dosing Effects
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Thomas Sartoretti, Robert P. Ganley, Ruiqing Ni, Patrick Freund, Hanns Ulrich Zeilhofer, and Jan Klohs
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tau ,spinal cord ,magnetic resonance imaging ,frontotemporal dementia ,Alzheimer’s disease ,animal models ,Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Abstract
In primary tauopathies, the deposition of tau neurofibrillary tangles and threads as well as neurodegenerative changes have been found within the brain and spinal cord. While degenerative changes have been intensively studied in the brain using structural magnetic resonance imaging (MRI), MRI studies investigating the spinal cord are still scarce. In the present study, we acquired ex vivo high resolution structural MRI of the cervical spinal cord of 8.5–9 month old hemizygous and homozygous P301L mice and non-transgenic littermates of both genders. We assessed the total cross-sectional area, and the gray and white matter anterior-posterior width and left-right width that are established imaging marker of spinal cord degeneration. We observed significant tissue-specific reductions in these parameters in female P301L mice that were stronger in homozygous than in hemizygous P301L mice, indicating both an effect of gender and transgene expression on cervical spinal cord atrophy. Moreover, atrophy was stronger in the gray matter than in the white matter. Immunohistochemical analysis revealed neurodegenerative and neuroinflammatory changes in the cervical spinal cord in both the gray and white matter of P301L mice. Collectively, our results provide evidence for cervical spinal cord atrophy that may directly contribute to the motor signs associated with tauopathy.
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- 2022
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122. Fitness of B-Cell Responses to SARS-CoV-2 WT and Variants Up to One Year After Mild COVID-19 – A Comprehensive Analysis
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Benjamin Meyer, Paola Andrea Martinez-Murillo, Barbara Lemaitre, Géraldine Blanchard-Rohner, Arnaud M. Didierlaurent, Paola Fontannaz, Chloé Eugercios Manzanas, Paul-Henri Lambert, Natasha Loevy, Laurent Kaiser, Julie Sartoretti, Chantal Tougne, Jean Villard, Angela Huttner, Claire-Anne Siegrist, and Christiane S. Eberhardt
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SARS-CoV-2 ,plasmablasts ,memory B cells ,antibody response ,COVID-19 ,neutralization ,Immunologic diseases. Allergy ,RC581-607 - Abstract
ObjectiveTo comprehensively evaluate SARS-CoV-2 specific B-cell and antibody responses up to one year after mild COVID-19.MethodsIn 31 mildly symptomatic COVID-19 participants SARS-CoV-2-specific plasmablasts and antigen-specific memory B cells were measured by ELISpot. Binding antibodies directed against the proteins spike (S), domain S1, and nucleocapsid (N) were estimated using rIFA, ELISA, and commercially available assays, and avidity measured using thiocyanate washout. Neutralizing antibodies against variants of concern were measured using a surrogate-neutralization test.ResultsPlasmablast responses were assessed in all participants who gave sequential samples during the first two weeks after infection; they preceded the rise in antibodies and correlated with antibody titers measured at one month. S1 and N protein-specific IgG memory B-cell responses remained stable during the first year, whereas S1-specific IgA memory B-cell responses declined after 6 months. Antibody titers waned over time, whilst potent affinity maturation was observed for anti-RBD antibodies. Neutralizing antibodies against wild-type (WT) and variants decayed during the first 6 months but titers significantly increased for Alpha, Gamma and Delta between 6 months and one year. Therefore, near-similar titers were observed for WT and Alpha after one year, and only slightly lower antibody levels for the Delta variant compared to WT. Anti-RBD antibody responses correlated with the neutralizing antibody titers at all time points, however the predicted titers were 3-fold lower at one year compared to one month.ConclusionIn mild COVID-19, stable levels of SARS-CoV-2 specific memory B cells and antibodies neutralizing current variants of concern are observed up to one year post infection. Care should be taken when predicting neutralizing titers using commercial assays that measure binding antibodies.
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- 2022
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123. Overview and stellar statistics of the expected Gaia Catalogue using the Gaia Object Generator
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Luri, X., Palmer, M., Arenou, F., Masana, E., de Bruijne, J., Antiche, E., Babusiaux, C., Borrachero, R., Sartoretti, P., Julbe, F., Isasi, Y., Martinez, O., Robin, A. C., Reylé, C., Jordi, C., and Carrasco, J. M.
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Astrophysics - Instrumentation and Methods for Astrophysics ,Astrophysics - Astrophysics of Galaxies - Abstract
Aims: An effort has been undertaken to simulate the expected Gaia Catalogue, including the effect of observational errors. A statistical analysis of this simulated Gaia data is performed in order to better understand what can be obtained from the Gaia astrometric mission. This catalogue is used in order to investigate the potential yield in astrometric, photometric and spectroscopic information, and the extent and effect of observational errors on the true Gaia Catalogue. This article is a follow-up to Robin et. al. (2012), where the expected Gaia Catalogue content was reviewed but without the simulation of observational errors. Methods: The Gaia Object Generator (GOG) catalogue is analysed using the Gaia Analysis Tool (GAT), producing a number of statistics on the catalogue. Results: A simulated catalogue of one billion objects is presented, with detailed information on the 523 million individual single stars it contains. Detailed information is provided for the expected errors in parallax, position, proper motion, radial velocity, photometry in the four Gaia bands, and physical parameter determination including temperature, metallicity and line of sight extinction., Comment: 16 pages, 23 figures, 5 tables. Accepted to A&A on 02/04/2014
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- 2014
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124. Metallicity and kinematics of the bar in-situ
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Babusiaux, C., Katz, D., Hill, V., Royer, F., Gomez, A., Arenou, F., Combes, F., Di Matteo, P., Gilmore, G., Haywood, M., Robin, A. C., Rodriguez-Fernandez, N., Sartoretti, P., and Schultheis, M.
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Astrophysics - Galaxy Astrophysics - Abstract
Constraints on the Galactic bulge/bar structure and formation history from stellar kinematics and metallicities mainly come from relatively high-latitude fields (|b|>4) where a complex mix of stellar population is seen. We aim here to constrain the formation history of the Galactic bar by studying the radial velocity and metallicity distributions of stars in-situ (|b|<1). We observed red clump stars in four fields along the bar's major axis (l=10,6,-6 and b=0 plus a field at l=0,b=1) with low-resolution spectroscopy from VLT/FLAMES, observing around the CaII triplet. We developed robust methods for extracting radial velocity and metallicity estimates from these low signal-to-noise spectra. We derived distance probability distributions using Bayesian methods rigorously handling the extinction law. We present radial velocities and metallicity distributions, as well as radial velocity trends with distance. We observe an increase in the radial velocity dispersion near the Galactic plane. We detect the streaming motion of the stars induced by the bar in fields at l=+/-6, the highest velocity components of this bar stream being metal-rich ([Fe/H]~0.2 dex). Our data is consistent with a bar inclined at 26+/-3 from the Sun-Galactic centre line. We observe a significant fraction of metal-poor stars, in particular in the field at l=0,b=1. We confirm the flattening of the metallicity gradient along the minor axis when getting closer to the plane, with a hint that it could actually be inverted. Our stellar kinematics corresponds to the expected behaviour of a bar issued from the secular evolution of the Galactic disc. The mix of several populations, seen further away from the plane, is also seen in the bar in-situ since our metallicity distributions highlight a different spatial distribution between metal-poor and metal-rich stars, the more metal-poor stars being more centrally concentrated., Comment: 18 pages, 17 figures, accepted for publication in A&A
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- 2014
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125. Long segment 3D double inversion recovery (DIR) hypersignal on MRI in glaucomatous optic neuropathy
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Thomas Sartoretti, Jörg Stürmer, Elisabeth Sartoretti, Arash Najafi, Árpád Schwenk, Michael Wyss, Christoph Binkert, and Sabine Sartoretti-Schefer
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Glaucoma ,Glaucomatous optic neuropathy ,Double inversion recovery (DIR) MR sequence ,DIR hypersignal ,Optical coherence tomography (OCT) ,Ophthalmology ,RE1-994 - Abstract
Abstract Background In this retrospective study the relationship between intraocular pressure (IOP), retinal nerve fiber layer (RNFL) thickness and pathologic hypersignal in optic nerve segments on 3D double inversion recovery (DIR) MR sequence in 21 patients with proven glaucoma of different origin was evaluated. Methods All patients were examined on a 3 T MR Philips® scanner. Pathologic optic nerve DIR hypersignal was determined in four different nerve segments. IOP was measured in mmHg by applanation tonometry. RNFL thickness was measured in μm with optical coherence tomography (OCT Heidelberg Engineering Spectralis® apparatus). Wilcoxon rank sum tests, student’s t-tests and (multivariate) linear regression models were appied. Results 3D DIR hypersignal was present in 17 (41.5%) optic nerves. 3D DIR hypersignal was not related to ischemic or demyelinating optic nerve pathology but was associated with increased IOP (19.8 [24–18]; versus 15.45; [18.85–13.75] mmHg; p = 0.008) and decreased RNFL thickness (61.06 ± 12.1 versus 82.5 ± 21.6 μm; p
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- 2019
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126. Diagnostic Value of Fully Automated Artificial Intelligence Powered Coronary Artery Calcium Scoring from 18F-FDG PET/CT
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Claudia Morf, Thomas Sartoretti, Antonio G. Gennari, Alexander Maurer, Stephan Skawran, Andreas A. Giannopoulos, Elisabeth Sartoretti, Moritz Schwyzer, Alessandra Curioni-Fontecedro, Catherine Gebhard, Ronny R. Buechel, Philipp A. Kaufmann, Martin W. Huellner, and Michael Messerli
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artificial intelligence ,coronary artery calcium scoring ,coronary artery disease ,deep learning ,positron emission tomography ,Medicine (General) ,R5-920 - Abstract
Objectives: The objective of this study was to assess the feasibility and accuracy of a fully automated artificial intelligence (AI) powered coronary artery calcium scoring (CACS) method on ungated CT in oncologic patients undergoing 18F-FDG PET/CT. Methods: A total of 100 oncologic patients examined between 2007 and 2015 were retrospectively included. All patients underwent 18F-FDG PET/CT and cardiac SPECT myocardial perfusion imaging (MPI) by 99mTc-tetrofosmin within 6 months. CACS was manually performed on non-contrast ECG-gated CT scans obtained from SPECT-MPI (i.e., reference standard). Additionally, CACS was performed using a cloud-based, user-independent tool (AI-CACS) on ungated CT scans from 18F-FDG-PET/CT examinations. Agatston scores from the manual CACS and AI-CACS were compared. Results: On a per-patient basis, the AI-CACS tool achieved a sensitivity and specificity of 85% and 90% for the detection of CAC. Interscore agreement of CACS between manual CACS and AI-CACS was 0.88 (95% CI: 0.827, 0.918). Interclass agreement of risk categories was 0.8 in weighted Kappa analysis, with a reclassification rate of 44% and an underestimation of one risk category by AI-CACS in 39% of cases. On a per-vessel basis, interscore agreement of CAC scores ranged from 0.716 for the circumflex artery to 0.863 for the left anterior descending artery. Conclusions: Fully automated AI-CACS as performed on non-contrast free-breathing, ungated CT scans from 18F-FDG-PET/CT examinations is feasible and provides an acceptable to good estimation of CAC burden. CAC load on ungated CT is, however, generally underestimated by AI-CACS, which should be taken into account when interpreting imaging findings.
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- 2022
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127. Des spatialités aux capacités
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Irene Sartoretti, Jacques Lévy, and Shin Alexandre Koseki
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pupils ,spatial practices ,spatiality ,urbanity ,construction of personality ,capacitation ,Sociology (General) ,HM401-1281 - Abstract
At the intersection of the social sciences of space and education, the article explores how pupils’ spatiality, that is, their spatial practices and orientations, participate in the construction of aspirations and capabilities. Particular attention is paid to isolated and low-density places, with their specific spatialities, compared with those of places with a high degree of urbanity. This article is the result of a qualitative research, combining semi-directive interviews and observation, carried out in eight public schools of the Reims school district which differ from each other in terms of geographical location and target public. The research showed how the spatial practices specific to different degrees of urbanity can have an impact on the construction of personality, which includes the development of capacities to create aspirations for social and spatial mobility.
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- 2022
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128. Single shot zonal oblique multislice SE-EPI diffusion-weighted imaging with low to ultra-high b-values for the differentiation of benign and malignant vertebral spinal fractures
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Elisabeth Sartoretti, Sabine Sartoretti-Schefer, Luuk van Smoorenburg, Barbara Eichenberger, Árpád Schwenk, David Czell, Alex Alfieri, Andreas Gutzeit, Manoj Mannil, Christoph A. Binkert, Michael Wyss, and Thomas Sartoretti
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Diffusion magnetic resonance imaging ,Spinal fractures ,Vertebral body ,Magnetic resonance imaging ,Medical physics. Medical radiology. Nuclear medicine ,R895-920 - Abstract
Purpose: To investigate the diagnostic yield of low to ultra-high b-values for the differentiation of benign from malignant vertebral fractures using a state-of-the-art single-shot zonal-oblique-multislice spin-echo echo-planar diffusion-weighted imaging sequence (SShot ZOOM SE-EPI DWI). Materials and Methods: 66 patients (34 malignant, 32 benign) were examined on 1.5 T MR scanners. ADC maps were generated from b-values of 0,400; 0,1000 and 0,2000s/mm2. ROIs were placed into the fracture of interest on ADC maps and trace images and into adjacent normal vertebral bodies on trace images. The ADC of fractures and the Signal-Intensity-Ratio (SIR) of fractures relative to normal vertebral bodies on trace images were considered quantitative metrics. The appearance of the fracture of interest was graded qualitatively as iso-, hypo-, or hyperintense relative to normal vertebrae. Results: ADC achieved an area under the curve (AUC) of 0.785/0.698/0.592 for b = 0,400/0,1000/0,2000s/mm2 ADC maps respectively. SIR achieved an AUC of 0.841/0.919/0.917 for b = 400/1000/2000s/mm2 trace images respectively. In qualitative analyses, only b = 2000s/mm2 trace images were diagnostically valuable (sensitivity:1, specificity:0.794). Machine learning models incorporating all qualitative and quantitative metrics achieved an AUC of 0.95/0.98/0.98 for b-values of 400/1000/2000s/mm2 respectively. The model incorporating only qualitative metrics from b = 2000s/mm2 achieved an AUC of 0.97. Conclusion: By using quantitative and qualitative metrics from SShot ZOOM SE-EPI DWI, benign and malignant vertebral fractures can be differentiated with high diagnostic accuracy. Importantly qualitative analysis of ultra-high b-value images may suffice for differentiation as well.
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- 2021
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129. Interactive, Up-to-date Meta-Analysis of MRI in the Management of Men with Suspected Prostate Cancer
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Becker, Anton S., Kirchner, Julian, Sartoretti, Thomas, Ghafoor, Soleen, Woo, Sungmin, Suh, Chong Hyun, Erinjeri, Joseph P., Hricak, Hedvig, and Vargas, H. Alberto
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- 2020
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130. Velocity and abundance precisions for future high-resolution spectroscopic surveys: a study for 4MOST
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Caffau, E., Koch, A., Sbordone, L., Sartoretti, P., Hansen, C. J., Royer, F., Leclerc, N., Bonifacio, P., Christlieb, N., Ludwig, H. G., Grebel, E. K., de Jong, R. S., Chiappini, C., Walcher, J., Mignot, S., Feltzing, S., Cohen, M., Minchev, I., Helmi, A., Piffl, T., Depagne, E., and Schnurr, O.
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Astrophysics - Instrumentation and Methods for Astrophysics ,Astrophysics - Astrophysics of Galaxies - Abstract
In preparation for future, large-scale, multi-object, high-resolution spectroscopic surveys of the Galaxy, we present a series of tests of the precision in radial velocity and chemical abundances that any such project can achieve at a 4m class telescope. We briefly discuss a number of science cases that aim at studying the chemo-dynamical history of the major Galactic components (bulge, thin and thick disks, and halo) - either as a follow-up to the Gaia mission or on their own merits. Based on a large grid of synthetic spectra that cover the full range in stellar parameters of typical survey targets, we devise an optimal wavelength range and argue for a moderately high-resolution spectrograph. As a result, the kinematic precision is not limited by any of these factors, but will practically only suffer from systematic effects, easily reaching uncertainties <1 km/s. Under realistic survey conditions (namely, considering stars brighter than r=16 mag with reasonable exposure times) we prefer an ideal resolving power of R~20000 on average, for an overall wavelength range (with a common two-arm spectrograph design) of [395;456.5] nm and [587;673] nm. We show for the first time on a general basis that it is possible to measure chemical abundance ratios to better than 0.1 dex for many species (Fe, Mg, Si, Ca, Ti, Na, Al, V, Cr, Mn, Co, Ni, Y, Ba, Nd, Eu) and to an accuracy of about 0.2 dex for other species such as Zr, La, and Sr. While our feasibility study was explicitly carried out for the 4MOST facility, the results can be readily applied to and used for any other conceptual design study for high-resolution spectrographs., Comment: 20 pages, 5 figures, accepted for publication in Astronomische Nachrichten
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- 2012
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131. The expected performance of stellar parametrization with Gaia spectrophotometry
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Liu, C., Bailer-Jones, C. A. L., Sordo, R., Vallenari, A., Borrachero, R., Luri, X., and Sartoretti, P.
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Astrophysics - Instrumentation and Methods for Astrophysics ,Astrophysics - Astrophysics of Galaxies ,Physics - Data Analysis, Statistics and Probability ,Statistics - Machine Learning - Abstract
Gaia will obtain astrometry and spectrophotometry for essentially all sources in the sky down to a broad band magnitude limit of G=20, an expected yield of 10^9 stars. Its main scientific objective is to reveal the formation and evolution of our Galaxy through chemo-dynamical analysis. In addition to inferring positions, parallaxes and proper motions from the astrometry, we must also infer the astrophysical parameters of the stars from the spectrophotometry, the BP/RP spectrum. Here we investigate the performance of three different algorithms (SVM, ILIUM, Aeneas) for estimating the effective temperature, line-of-sight interstellar extinction, metallicity and surface gravity of A-M stars over a wide range of these parameters and over the full magnitude range Gaia will observe (G=6-20mag). One of the algorithms, Aeneas, infers the posterior probability density function over all parameters, and can optionally take into account the parallax and the Hertzsprung-Russell diagram to improve the estimates. For all algorithms the accuracy of estimation depends on G and on the value of the parameters themselves, so a broad summary of performance is only approximate. For stars at G=15 with less than two magnitudes extinction, we expect to be able to estimate Teff to within 1%, logg to 0.1-0.2dex, and [Fe/H] (for FGKM stars) to 0.1-0.2dex, just using the BP/RP spectrum (mean absolute error statistics are quoted). Performance degrades at larger extinctions, but not always by a large amount. Extinction can be estimated to an accuracy of 0.05-0.2mag for stars across the full parameter range with a priori unknown extinction between 0 and 10mag. Performance degrades at fainter magnitudes, but even at G=19 we can estimate logg to better than 0.2dex for all spectral types, and [Fe/H] to within 0.35dex for FGKM stars, for extinctions below 1mag., Comment: MNRAS, in press. Minor corrections made in v2
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- 2012
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132. 4MOST - 4-metre Multi-Object Spectroscopic Telescope
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de Jong, Roelof S., Bellido-Tirado, Olga, Chiappini, Cristina, Depagne, Éric, Haynes, Roger, Johl, Diane, Schnurr, Olivier, Schwope, Axel, Walcher, Jakob, Dionies, Frank, Haynes, Dionne, Kelz, Andreas, Kitaura, Francisco S., Lamer, Georg, Minchev, Ivan, Müller, Volker, Nuza, Sebastián E., Olaya, Jean-Christophe, Piffl, Tilmann, Popow, Emil, Steinmetz, Matthias, Ural, Uğur, Williams, Mary, Winkler, Roland, Wisotzki, Lutz, Ansorgb, Wolfgang R., Banerji, Manda, Solares, Eduardo Gonzalez, Irwin, Mike, Kennicutt Jr, Robert C., King, David, McMahon, Richard, Koposov, Sergey, Parry, Ian R., Walton, Nicholas A., Finger, Gert, Iwert, Olaf, Krumpe, Mirko, Lizon, Jean-Louis, Vincenzo, Mainieri, Amans, Jean-Philippe, Bonifacio, Piercarlo, Cohen, Mathieu, Francois, Patrick, Jagourel, Pascal, Mignot, Shan B., Royer, Frédéric, Sartoretti, Paola, Bender, Ralf, Grupp, Frank, Hess, Hans-Joachim, Lang-Bardl, Florian, Muschielok, Bernard, Böhringer, Hans, Boller, Thomas, Bongiorno, Angela, Brusa, Marcella, Dwelly, Tom, Merloni, Andrea, Nandra, Kirpal, Salvato, Mara, Pragt, Johannes H., Navarro, Ramón, Gerlofsma, Gerrit, Roelfsema, Ronald, Dalton, Gavin B., Middleton, Kevin F., Tosh, Ian A., Boeche, Corrado, Caffau, Elisabetta, Christlieb, Norbert, Grebel, Eva K., Hansen, Camilla, Koch, Andreas, Ludwig, Hans-G., Quirrenbach, Andreas, Sbordone, Luca, Seifert, Walter, Thimm, Guido, Trifonov, Trifon, Helmi, Amina, Trager, Scott C., Feltzing, Sofia, Korn, Andreas, and Boland, Wilfried
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Astrophysics - Instrumentation and Methods for Astrophysics ,Astrophysics - Cosmology and Nongalactic Astrophysics ,Astrophysics - Astrophysics of Galaxies ,Astrophysics - High Energy Astrophysical Phenomena - Abstract
The 4MOST consortium is currently halfway through a Conceptual Design study for ESO with the aim to develop a wide-field (>3 square degree, goal >5 square degree), high-multiplex (>1500 fibres, goal 3000 fibres) spectroscopic survey facility for an ESO 4m-class telescope (VISTA). 4MOST will run permanently on the telescope to perform a 5 year public survey yielding more than 20 million spectra at resolution R~5000 ({\lambda}=390-1000 nm) and more than 2 million spectra at R~20,000 (395-456.5 nm & 587-673 nm). The 4MOST design is especially intended to complement three key all-sky, space-based observatories of prime European interest: Gaia, eROSITA and Euclid. Initial design and performance estimates for the wide-field corrector concepts are presented. We consider two fibre positioner concepts, a well-known Phi-Theta system and a new R-Theta concept with a large patrol area. The spectrographs are fixed configuration two-arm spectrographs, with dedicated spectrographs for the high- and low-resolution. A full facility simulator is being developed to guide trade-off decisions regarding the optimal field-of-view, number of fibres needed, and the relative fraction of high-to-low resolution fibres. Mock catalogues with template spectra from seven Design Reference Surveys are simulated to verify the science requirements of 4MOST. The 4MOST consortium aims to deliver the full 4MOST facility by the end of 2018 and start delivering high-level data products for both consortium and ESO community targets a year later with yearly increments., Comment: To appear in the proceedings of the SPIE Astronomical Instrumentation + Telescopes conference, Amsterdam, 2012. 15 pages, 16 figures
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- 2012
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133. Gaia Universe Model Snapshot : A statistical analysis of the expected contents of the Gaia catalogue
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Robin, A. C., Luri, X., Reylé, C., Isasi, Y., Grux, E., Blanco-Cuaresma, S., Arenou, F., Babusiaux, C., Belcheva, M., Drimmel, R., Jordi, C., Krone-Martins, A., Masana, E., Mauduit, J. C., Mignard, F., Mowlavi, N., Rocca-Volmerange, B., Sartoretti, P., Slezak, E., and Sozzetti, A.
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Astrophysics - Astrophysics of Galaxies ,Astrophysics - Cosmology and Nongalactic Astrophysics ,Astrophysics - Instrumentation and Methods for Astrophysics ,Astrophysics - Solar and Stellar Astrophysics - Abstract
Context. This study has been developed in the framework of the computational simulations executed for the preparation of the ESA Gaia astrometric mission. Aims. We focus on describing the objects and characteristics that Gaia will potentially observe without taking into consideration instrumental effects (detection efficiency, observing errors). Methods. The theoretical Universe Model prepared for the Gaia simulation has been statistically analyzed at a given time. Ingredients of the model are described, giving most attention to the stellar content, the double and multiple stars, and variability. Results. In this simulation the errors have not been included yet. Hence we estimate the number of objects and their theoretical photometric, astrometric and spectroscopic characteristics in the case that they are perfectly detected. We show that Gaia will be able to potentially observe 1.1 billion of stars (single or part of multiple star systems) of which about 2% are variable stars, 3% have one or two exoplanets. At the extragalactic level, observations will be potentially composed by several millions of galaxies, half million to 1 million of quasars and about 50,000 supernovas that will occur during the 5 years of mission. The simulated catalogue will be made publicly available by the DPAC on the Gaia portal of the ESA web site http://www.rssd.esa.int/gaia/., Comment: 21 pages, 21 figures, accepted for publication in Astronomy and Astrophysics, typos corrected in author names
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- 2012
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134. Clinical feasibility of ultrafast intracranial vessel imaging with non-Cartesian spiral 3D time-of-flight MR angiography at 1.5T: An intra-individual comparison study.
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Thomas Sartoretti, Elisabeth Sartoretti, Árpád Schwenk, Luuk van Smoorenburg, Manoj Mannil, André Euler, Anton S Becker, Alex Alfieri, Arash Najafi, Christoph A Binkert, Michael Wyss, and Sabine Sartoretti-Schefer
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Medicine ,Science - Abstract
OBJECTIVES:Non-Cartesian Spiral readout can be implemented in 3D Time-of-flight (TOF) MR angiography (MRA) with short acquisition times. In this intra-individual comparison study we evaluated the clinical feasibility of Spiral TOF MRA in comparison with compressed sensing accelerated TOF MRA at 1.5T for intracranial vessel imaging as it has yet to be determined. MATERIALS AND METHODS:Forty-four consecutive patients with suspected intracranial vascular disease were imaged with two Spiral 3D TOFs (Spiral, 0.82x0.82x1.2 mm3, 01:32 min; Spiral 0.8, 0.8x0.8x0.8 mm3, 02:12 min) and a Compressed SENSE accelerated 3D TOF (CS 3.5, 0.82x0.82x1.2 mm3, 03:06 min) at 1.5T. Two neuroradiologists assessed qualitative (visualization of central and peripheral vessels) and quantitative image quality (Contrast Ratio, CR) and performed lesion and variation assessment for all three TOFs in each patient. After the rating process, the readers were questioned and representative cases were reinspected in a non-blinded fashion. For statistical analysis, the Friedman and Nemenyi post-hoc test, Kendall W tests, repeated measure ANOVA and weighted Cohen's Kappa tests were used. RESULTS:The Spiral and Spiral 0.8 outperformed the CS 3.5 in terms of peripheral image quality (p0.05). The readers noted slight differences in the appearance of maximum intensity projection images. A good to high degree of interstudy agreement between the three TOFs was observed for lesion and variation assessment (W = 0.638, p
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- 2020
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135. Common artefacts encountered on images acquired with combined compressed sensing and SENSE
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Thomas Sartoretti, Carolin Reischauer, Elisabeth Sartoretti, Christoph Binkert, Arash Najafi, and Sabine Sartoretti-Schefer
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Artefacts ,Magnetic resonance imaging ,Motion artefacts ,Compressed SENSE technique ,Scan time reduction ,Medical physics. Medical radiology. Nuclear medicine ,R895-920 - Abstract
Abstract Various techniques have been proposed which aim at scan time reduction and/or at improved image quality by increasing the spatial resolution. Compressed sensing (CS) takes advantage of the fact that MR images are usually sparse in some transform domains and recovers this sparse representation from undersampled data. CS may be combined with parallel imaging such as sensitivity encoding (SENSE), hereafter referred to as Compressed SENSE, to further accelerate image acquisition since both techniques rely on different ancillary information. In practice, Compressed SENSE may reduce scan times of two-dimensional (2D) and three-dimensional (3D) scans by up to 50% depending on the sequence acquired and it works on 1.5-T or 3-T scanners. Compressed SENSE may be applied to 2D and 3D sequences in various anatomies and image contrasts. Image artefacts (i.e. motion, metal and flow artefacts, susceptibility artefacts) frequently appear on magnetic resonance images. The Compressed SENSE technique may cause special artefacts, which might influence image assessment if they go undetected by imaging readers. Our institution has been using Compressed SENSE for over half a year, both in a neuroradiological setting and for musculoskeletal examinations. So far, three special image artefacts—called the wax-layer artefact, the streaky-linear artefact and the starry-sky artefact—have been encountered and we aim to review these main artefacts appearing in sequences acquired with Compressed SENSE. Teaching Points • Compressed SENSE combines compressed sensing and SENSE technique. • Compressed SENSE permits scan time reduction and increases spatial image resolution. • Images acquired with Compressed SENSE may present with special artefacts. • Knowledge of artefacts is necessary for reliable image assessment.
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- 2018
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136. In vitro qualitative and quantitative CT assessment of iodinated aerosol nasal deposition using a 3D-printed nasal replica
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Thomas Sartoretti, Manoj Mannil, Stefan Biendl, Johannes M. Froehlich, Hatem Alkadhi, and Matthias Zadory
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Aerosols ,Contrast media ,Iodine ,Nasal sprays ,Tomography (x-ray computed) ,Medical physics. Medical radiology. Nuclear medicine ,R895-920 - Abstract
Abstract Computed tomography can provide high-resolution details on nasal anatomy being potentially useful for the assessment of nasal spray deposition. The purpose of this technical note was to present a method based on CT imaging to assess qualitatively and quantitatively the in vitro spray deposition patterns within the sinonasal cavities of a nasal replica obtained by three-dimensional (3D) printing, using iodinated contrast agent labelled solutions with high spatial and temporal resolution. Using a third generation dual-source CT scanner in single energy mode, scans of a nasal replica were acquired following application of iodinated contrast agent labelled aerosols with an iodine concentration of 92.5 mgl/mL. Two software programmes were then utilised (Osirix MD v.9.0, Pixmeo, Geneva, Switzerland; 3mensio, Pie Medical Imaging, Bilthoven, Netherlands) to generate three-dimensional reconstructions of the scans, thus enabling the rapid detection and visualisation of administered single droplets and their voxel-by-voxel localisation. Using this approach, we achieved recovery rates between 84–98% and 89–109% (depending on the software programme) of the total applied aerosol volume.
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- 2019
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137. Radial velocities, dynamics of stars and nebulosities with GAIA and VLT-GIRAFFE
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Martayan, Christophe, Fremat, Yves, Blomme, Ronny, Jonckheere, Anthony, Delle-Luche, Celine, Sartoretti, Paola, Katz, David, Viala, Yves, Floquet, Michele, Hubert, Anne-Marie, and Neiner, Coralie
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Astrophysics - Abstract
This document is divided in two parts. The first part deals with the radial velocities (RV) distributions for B-type stars and nebulosities observed with the VLT-GIRAFFE in the Large and Small Magellanic Clouds towards the open clusters NGC2004 and NGC330. Thanks to the resolution of GIRAFFE spectra, we found that the RV distribution for the nebulosities in the LMC is bi-modal. This bi-modality can be interpreted, in term of dynamics, by the expansion of the LMC4 superbubble. The second part deals with the GAIA space mission and the determination of the radial velocities by using Radial Velocity Spectrometer (RVS) spectra. The methods to determine the radial velocities are presented as well as preliminary results on simulated RVS spectra., Comment: Proceedings GSD2008 conference, submitted to AN
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- 2008
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138. Prediction of treatment response to transarterial radioembolization of liver metastases: Radiomics analysis of pre-treatment cone-beam CT: A proof of concept study
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Adrian Kobe, Juliana Zgraggen, Florian Messmer, Gilbert Puippe, Thomas Sartoretti, Hatem Alkadhi, Thomas Pfammatter, and Manoj Mannil
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Radiomics ,Transarterial radioembolization ,Machine learning ,Cone-Beam CT ,Medical physics. Medical radiology. Nuclear medicine ,R895-920 - Abstract
Purpose: To investigate the potential of texture analysis and machine learning to predict treatment response to transarterial radioembolization (TARE) on pre-interventional cone-beam computed tomography (CBCT) images in patients with liver metastases. Materials and Methods: In this IRB-approved retrospective single-center study 36 patients with a total of 104 liver metastases (56 % male, mean age 61.1 ± 13 years) underwent CBCT prior to TARE and follow-up imaging 6 months after therapy. Treatment response was evaluated according to RECIST version 1.1 and dichotomized into disease control (partial response/stable disease) versus disease progression (progressive disease). After target lesion segmentation, 104 radiomics features corresponding to seven different feature classes were extracted with the pyRadiomics package. After dimension reduction machine learning classifications were performed on a custom artificial neural network (ANN). Ten-fold cross validation on a previously unseen test data set was performed. Results: The average administered cumulative activity from TARE was 1.6 Gbq (± 0.5 Gbq). At a mean follow-up of 5.9 ± 0.8 months disease control was achieved in 82 % of metastases. After dimension reduction, 15 of 104 (15 %) texture analysis features remained for further analysis. On a previously unseen set of liver metastases the Multilayer Perceptron ANN yielded a sensitivity of 94.2 %, specificity of 67.7 % and an area-under-the receiver operating characteristics curve of 0.85. Conclusion: Our study indicates that texture analysis-based machine learning may has potential to predict treatment response to TARE using pre-treatment CBCT images of patients with liver metastases with high accuracy.
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- 2021
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139. Common artefacts encountered on images acquired with combined compressed sensing and SENSE
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Sartoretti, Thomas, Reischauer, Carolin, Sartoretti, Elisabeth, Binkert, Christoph, Najafi, Arash, and Sartoretti-Schefer, Sabine
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- 2018
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140. Investigation of Neurodegenerative Processes in Amyotrophic Lateral Sclerosis Using White Matter Fiber Density
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Stämpfli, Philipp, Sommer, Stefan, Czell, David, Kozerke, Sebastian, Neuwirth, Christoph, Weber, Markus, Sartoretti-Schefer, Sabine, Seifritz, Erich, Gutzeit, Andreas, and Reischauer, Carolin
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- 2019
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141. Intraneural hemorrhage in traumatic oculomotor nerve palsy
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Thomas Sartoretti, Elisabeth Sartoretti, Christoph Binkert, MD, David Czell, MD, and Sabine Sartoretti-Schefer, MD
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Susceptibility weighted MR imaging ,Traumatic oculomotor nerve palsy ,Intraneural hemorrhage ,Diffuse axonal injury ,Medical physics. Medical radiology. Nuclear medicine ,R895-920 - Abstract
Isolated traumatic oculomotor nerve palsy without internal ophthalmoplegia is a rare condition after closed head trauma. The nerve strain leads to intraneural edema with nerve swelling on T2-weighted magnetic resonance (MR) images and traumatic disruption of the blood peripheral nerve barrier with contrast enhancement on T1-weighted MR images. In this patient, susceptibility-weighted MR imaging allowed the direct visualization of the intraneural hemorrhage after suspected traumatic diffuse neuronal axonal injury.
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- 2017
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142. Amide Proton Transfer Weighted Imaging Shows Differences in Multiple Sclerosis Lesions and White Matter Hyperintensities of Presumed Vascular Origin
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Elisabeth Sartoretti, Thomas Sartoretti, Michael Wyss, Anton S. Becker, Árpád Schwenk, Luuk van Smoorenburg, Arash Najafi, Christoph Binkert, Harriet C. Thoeny, Jinyuan Zhou, Shanshan Jiang, Nicole Graf, David Czell, Sabine Sartoretti-Schefer, and Carolin Reischauer
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magnetic resonance imaging ,amide proton transfer ,molecular imaging ,multiple sclerosis lesions ,white matter lesions ,CEST ,Neurology. Diseases of the nervous system ,RC346-429 - Abstract
Objectives: To assess the ability of 3D amide proton transfer weighted (APTw) imaging based on magnetization transfer analysis to discriminate between multiple sclerosis lesions (MSL) and white matter hyperintensities of presumed vascular origin (WMH) and to compare APTw signal intensity of healthy white matter (healthy WM) with APTw signal intensity of MSL and WHM.Materials and Methods: A total of 27 patients (16 female, 11 males, mean age 39.6 years) with multiple sclerosis, 35 patients (17 females, 18 males, mean age 66.6 years) with small vessel disease (SVD) and 20 healthy young volunteers (9 females, 11 males, mean age 29 years) were included in the MSL, the WMH, and the healthy WM group. MSL and WMH were segmented on fluid attenuated inversion recovery (FLAIR) images underlaid onto APTw images. Histogram parameters (mean, median, 10th, 25th, 75th, 90th percentile) were calculated. Mean APTw signal intensity values in healthy WM were defined by “Region of interest” (ROI) measurements. Wilcoxon rank sum tests and receiver operating characteristics (ROC) curve analyses of clustered data were applied.Results: All histogram parameters except the 75 and 90th percentile were significantly different between MSL and WMH (p = 0.018–p = 0.034). MSL presented with higher median values in all parameters. The histogram parameters offered only low diagnostic performance in discriminating between MSL and WMH. The 10th percentile yielded the highest diagnostic performance with an AUC of 0.6245 (95% CI: [0.532, 0.717]). Mean APTw signal intensity values of MSL were significantly higher than mean values of healthy WM (p = 0.005). The mean values of WMH did not differ significantly from the values of healthy WM (p = 0.345).Conclusions: We found significant differences in APTw signal intensity, based on straightforward magnetization transfer analysis, between MSL and WMH and between MSL and healthy WM. Low AUC values from ROC analyses, however, suggest that it may be challenging to determine type of lesion with APTw imaging. More advanced analysis of the APT CEST signal may be helpful for further differentiation of MSL and WMH.
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- 2019
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143. Sex and Age Dependencies of Aqueductal Cerebrospinal Fluid Dynamics Parameters in Healthy Subjects
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Thomas Sartoretti, Michael Wyss, Elisabeth Sartoretti, Carolin Reischauer, Nicolin Hainc, Nicole Graf, Christoph Binkert, Arash Najafi, and Sabine Sartoretti-Schefer
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magnetic resonance imaging ,cerebrospinal fluid ,phase contrast MRI ,flow dynamics ,aqueduct ,sex ,Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Abstract
ObjectivesTo assess the influence of age and sex on 10 cerebrospinal fluid (CSF) flow dynamics parameters measured with an MR phase contrast (PC) sequence within the cerebral aqueduct at the level of the intercollicular sulcus.Materials and Methods128 healthy subjects (66 female subjects with a mean age of 52.9 years and 62 male subjects with a mean age of 51.8 years) with a normal Evans index, normal medial temporal atrophy (MTA) score, and without known disorders of the CSF circulation were included in the study. A PC MR sequence on a 3T MR scanner was used. Ten different flow parameters were analyzed using postprocessing software. Ordinal and linear regression models were calculated.ResultsThe parameters stroke volume (sex: p < 0.001, age: p = 0.003), forward flow volume (sex: p < 0.001, age: p = 0.002), backward flow volume (sex: p < 0.001, age: p = 0.018), absolute stroke volume (sex: p < 0.001, age: p = 0.005), mean flux (sex: p < 0.001, age: p = 0.001), peak velocity (sex: p = 0.009, age: p = 0.0016), and peak pressure gradient (sex: p = 0.029, age: p = 0.028) are significantly influenced by sex and age. The parameters regurgitant fraction, stroke distance, and mean velocity are not significantly influenced by sex and age.ConclusionCSF flow dynamics parameters measured in the cerebral aqueduct are partly age and sex dependent. For establishment of reliable reference values for clinical use in future studies, the impact of sex and age should be considered and incorporated.
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- 2019
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144. Amide Proton Transfer Contrast Distribution in Different Brain Regions in Young Healthy Subjects
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Thomas Sartoretti, Elisabeth Sartoretti, Michael Wyss, Árpád Schwenk, Arash Najafi, Christoph Binkert, Carolin Reischauer, Jinyuan Zhou, Shanshan Jiang, Anton S. Becker, and Sabine Sartoretti-Schefer
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magnetic resonance imaging ,amide proton transfer-weighted magnetic resonance imaging ,molecular imaging ,normal amide proton transfer-weighted signal intensity values ,brain ,Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Abstract
ObjectivesTo define normal signal intensity values of amide proton transfer-weighted (APTw) magnetic resonance (MR) imaging in different brain regions.Materials and MethodsTwenty healthy subjects (9 females, mean age 29 years, range 19 – 37 years) underwent MR imaging at 3 Tesla. 3D APTw (RF saturation B1,rms = 2 μT, duration 2 s, 100% duty cycle) and 2D T2-weighted turbo spin echo (TSE) images were acquired. Postprocessing (image fusion, ROI measurements of APTw intensity values in 22 different brain regions) was performed and controlled by two independent neuroradiologists. Values were measured separately for each brain hemisphere. A subject was scanned both in prone and supine position to investigate differences between hemispheres. A mixed model on a 5% significance level was used to assess the effect of gender, brain region and side on APTw intensity values.ResultsMean APTw intensity values in the hippocampus and amygdala varied between 1.13 and 1.57%, in the deep subcortical nuclei (putamen, globus pallidus, head of caudate nucleus, thalamus, red nucleus, substantia nigra) between 0.73 and 1.84%, in the frontal, occipital and parietal cortex between 0.56 and 1.03%; in the insular cortex between 1.11 and 1.15%, in the temporal cortex between 1.22 and 1.37%, in the frontal, occipital and parietal white matter between 0.32 and 0.54% and in the temporal white matter between 0.83 and 0.89%. APTw intensity values were significantly impacted both by brain region (p < 0.001) and by side (p < 0.001), whereby overall values on the left side were higher than on the right side (1.13 vs. 0.9%). Gender did not significantly impact APTw intensity values (p = 0.24). APTw intensity values between the left and the right side were partially reversed after changing the position of one subject from supine to prone.ConclusionWe determined normal baseline APTw intensity values in different anatomical localizations in healthy subjects. APTw intensity values differed both between anatomical regions and between left and right brain hemisphere.
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- 2019
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145. Reduction of procedure times in routine clinical practice with Compressed SENSE magnetic resonance imaging technique.
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Elisabeth Sartoretti, Thomas Sartoretti, Christoph Binkert, Arash Najafi, Árpád Schwenk, Martin Hinnen, Luuk van Smoorenburg, Barbara Eichenberger, and Sabine Sartoretti-Schefer
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Medicine ,Science - Abstract
ObjectivesAcceleration of MR sequences beyond current parallel imaging techniques is possible with the Compressed SENSE technique that has recently become available for 1.5 and 3 Tesla scanners, for nearly all image contrasts and for 2D and 3D sequences. The impact of this technique on examination timing parameters and MR protocols in a clinical setting was investigated in this retrospective study.Material and methodsA numerical analysis of the examination timing parameters (scan time, exam time, procedure time, interscan delay time, changeover time, nonscan time) based on the MR protocols of 6 different body regions (brain, knee, lumbar spine, breast, shoulder) using MR log files was performed and the total number of examinations acquired from January to April both in 2017 and 2018 on a 1.5 T MR scanner was registered. Percentages, box plots and unpaired two-sided t tests were obtained for statistical evaluation.ResultsAll examination timing parameters of the six anatomical regions analysed were significantly shortened after implementation of Compressed SENSE. On average, scan times were accelerated by 20.2% (pConclusionCompressed SENSE allows for a significant acceleration of MR examinations and a considerable increase in the total number of MR examinations is possible.
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- 2019
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146. Quantum Iterative Reconstruction for Low-Dose Ultra-High-Resolution Photon-Counting Detector CT of the Lung
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Thomas Sartoretti, Damien Racine, Victor Mergen, Lisa Jungblut, Pascal Monnin, Thomas G. Flohr, Katharina Martini, Thomas Frauenfelder, Hatem Alkadhi, and André Euler
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phantoms ,imaging ,tomography ,X-ray computed ,lung ,Medicine (General) ,R5-920 - Abstract
The aim of this study was to characterize image quality and to determine the optimal strength levels of a novel iterative reconstruction algorithm (quantum iterative reconstruction, QIR) for low-dose, ultra-high-resolution (UHR) photon-counting detector CT (PCD-CT) of the lung. Images were acquired on a clinical dual-source PCD-CT in the UHR mode and reconstructed with a sharp lung reconstruction kernel at different strength levels of QIR (QIR-1 to QIR-4) and without QIR (QIR-off). Noise power spectrum (NPS) and target transfer function (TTF) were analyzed in a cylindrical phantom. 52 consecutive patients referred for low-dose UHR chest PCD-CT were included (CTDIvol: 1 ± 0.6 mGy). Quantitative image quality analysis was performed computationally which included the calculation of the global noise index (GNI) and the global signal-to-noise ratio index (GSNRI). The mean attenuation of the lung parenchyma was measured. Two readers graded images qualitatively in terms of overall image quality, image sharpness, and subjective image noise using 5-point Likert scales. In the phantom, an increase in the QIR level slightly decreased spatial resolution and considerably decreased noise amplitude without affecting the frequency content. In patients, GNI decreased from QIR-off (202 ± 34 HU) to QIR-4 (106 ± 18 HU) (p < 0.001) by 48%. GSNRI increased from QIR-off (4.4 ± 0.8) to QIR-4 (8.2 ± 1.6) (p < 0.001) by 87%. Attenuation of lung parenchyma was highly comparable among reconstructions (QIR-off: −849 ± 53 HU to QIR-4: −853 ± 52 HU, p < 0.001). Subjective noise was best in QIR-4 (p < 0.001), while QIR-3 was best for sharpness and overall image quality (p < 0.001). Thus, our phantom and patient study indicates that QIR-3 provides the optimal iterative reconstruction level for low-dose, UHR PCD-CT of the lungs.
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- 2022
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147. In-vivo evaluation of neuronal and glial changes in amyotrophic lateral sclerosis with diffusion tensor spectroscopy
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Carolin Reischauer, Andreas Gutzeit, Christoph Neuwirth, Alexander Fuchs, Sabine Sartoretti-Schefer, Markus Weber, and David Czell
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Computer applications to medicine. Medical informatics ,R858-859.7 ,Neurology. Diseases of the nervous system ,RC346-429 - Abstract
Diffusion tensor spectroscopy (DTS) combines features of magnetic resonance spectroscopy and diffusion tensor imaging and permits evaluating cell-type specific properties of microstructure by probing the diffusion of intracellular metabolites. This exploratory study investigates for the first time microstructural changes in the neuronal and glial compartments of the brain of patients with amyotrophic lateral sclerosis (ALS) using DTS. To this end, the diffusion properties of the neuronal metabolite tNAA (N-acetylaspartate + N-acetylaspartylglutamate) and the predominantly glial metabolites tCr (creatine + phosphocreatine) and tCho (choline-containing compounds) were evaluated in the primary motor cortex of 24 ALS patients and 27 healthy controls. Significantly increased values in the diffusivities of all three metabolites were found in ALS patients relative to controls. Further analysis revealed more pronounced microstructural alterations in ALS patients with limb onset than with bulbar onset relative to controls. This observation may be related to the fact that the spectroscopic voxel was positioned in the part of the motor cortex where the motor functions of the limbs are represented. The higher diffusivities of tNAA may reflect neuronal damage and/or may be a consequence of mitochondrial dysfunction in ALS. Increased diffusivities of tCr and tCho are in line with reactive microglia and astrocytes surrounding degenerating motor neurons in the primary motor cortex of ALS patients. This pilot study demonstrates for the first time that cell-type specific microstructural alterations in the brain of ALS patients may be explored in vivo and non-invasively with DTS. In conjunction with other microstructural magnetic resonance imaging techniques, DTS may provide further insights into the pathogenic mechanisms that underlie neurodegeneration in ALS. Keywords: Amyotrophic lateral sclerosis, Neurodegeneration, Diffusion-weighted spectroscopy, Tissue microstructure, Intracellular metabolites
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- 2018
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148. Long segment 3D double inversion recovery (DIR) hypersignal on MRI in glaucomatous optic neuropathy
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Sartoretti, Thomas, Stürmer, Jörg, Sartoretti, Elisabeth, Najafi, Arash, Schwenk, Árpád, Wyss, Michael, Binkert, Christoph, and Sartoretti-Schefer, Sabine
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- 2019
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149. Predicting Meningioma Resection Status: Use of Deep Learning.
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Akkurt, Burak Han, Wanderer, Stefan, Schwyzer, Lucia, Berberat, Jatta, Henssen, Dylan J.H.A., Sartoretti, Thomas, Sartoretti, Elisabeth, Musigmann, Manfred, Brokinkel, Benjamin, Stummer, Walter, Heindel, Walter, Remonda, Luca, and Mannil, Manoj
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- 2023
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150. Bacterial contamination of ultrasound probes in different radiological institutions before and after specific hygiene training: do we have a general hygienical problem?
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Sartoretti, Thomas, Sartoretti, Elisabeth, Bucher, Candid, Doert, Aleksis, Binkert, Christoph, Hergan, Klaus, Meissnitzer, Matthias, Froehlich, Johannes, Kolokythas, Orpheus, Matoori, Simon, Orasch, Christina, Kos, Sebastian, Sartoretti-Schefer, Sabine, and Gutzeit, Andreas
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- 2017
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