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Coilia nasus is an endangered fish species in the Yangtze River, and there is urgent need to know the genes related to its reproduction and fertility. The DAZ family including boule, daz and dazl, plays an important role in germ cells development. In this study, the cDNA sequence of boule (Cnbol) and dazl (Cndazl) genes were cloned and their expression patterns were characterized in Coilia nasus. RT-PCR showed that the expression of Cnbol and Cndazl mRNAs was restricted in adult gonads. The section in situ hybridization indicated that the temporospatial expression patterns of Cnbol and Cndazl were significantly different. In the testis, Cnbol was mainly detected in spermatocytes and spermatids, while Cndazl was prominently expressed in s permatogonia. In the ovary, Cnbol and Cndazl were highly expressed in the early stages of oocytes. Interestingly, Cndazl was also concentrated in perinuclear speckle and then localized to the Balbiani body in late stages of oocytes. In addition, Cnbol and Cndazl 3' UTR can specifically label medaka Primordial Germ Cells (PGCs). According to our results, Cnbol and Cndazl are marker genes of germ cells and may play a vital role in the development and differentiation of germ cells in Coilia nasus. [ABSTRACT FROM AUTHOR]

Quantification of species' spatial distributions and population trends is crucial for successful conservation efforts. Obtaining sufficient population data, however, is often difficult in the marine environment, especially for rare fish and invertebrate species that are small, cryptic and very difficult to detect.This study sought to understand the effort required to search for undiscovered populations of small, cryptic, marine species in shallow vegetated coastal habitats and track population numbers, using the Critically Endangered red handfish (Thymichthys politus) as a representative species. A sampling strategy was designed using a combination of environmental DNA (eDNA) and structured underwater scuba surveys of life‐like 3D‐printed 'handfish replicas' to estimate detectability and ultimately determine whether current population monitoring is adequately covering the remaining habitat occupied by the species.Tested over scales of hundreds of metres to kilometres, the eDNA assays performed relatively poorly in situ, detecting red handfish presence in only ~13% of samples collected from the centre of a known, yet low‐density, red handfish site. In contrast, underwater searches for independently placed handfish replicas by scuba divers indicated that mean detection probabilities at finer scales (~100 m) ranged from 57 to 97%. Near certain (95% probability) detection of an adult handfish was achievable with only one to three surveys (300 m2 belt transects), depending on the habitat complexity.While other species will vary in detectability using eDNA and underwater searches, these findings give insight into the general effort required for the detection of small, rare species inhabiting vegetated coastal environments. Such knowledge not only helps to refine monitoring and conservation efforts for known threatened species, but may also assist in identifying other inconspicuous species whose population declines may otherwise go unnoticed. [ABSTRACT FROM AUTHOR]

Invasive species represent a threat to biodiversity and ecosystem services and cost millions of dollars to the global economy. The viviparous Mexican fish known as the tequila splitfin (Zoogoneticus tequila) became extinct in the wild as a consequence of habitat loss and degradation, and interactions with invasive species. Tequila splitfins are native to the Teuchitlan River in Central Mexico; they were kept in captivity and reintroduced into their native distribution in 2016. Approximately 80% of the fish in the Teuchitlan River are exotic species, and over 50% are twospot livebearers (Pseudoxiphophorus bimaculatus).We performed an ex‐situ mesocosm experiment to explore whether tequila splitfin populations would establish and increase, and how fish would behave when introduced into sites already colonised by other species. We tested this idea by introducing tequila splitfin individuals into empty mesocosms, mesocosms where individuals of the native Ameca splendens had established, mesocosms with individuals of the native Goodea atripinnis and mesocosms with individuals of exotic invasive twospot livebearers. All heterospecific species have been recorded in tequila splitfin's native range, are viviparous fish and share ecological requirements with them.We found that tequila splitfin abundance (number of individuals that survived and new individuals) was greater when sharing mesocosms with native species. Furthermore, they had reduced activity levels when inhabiting mesocosms with exotic invasive twospot livebearers, in comparison, interactions with natives proved to be beneficial.Our results highlight the need to remove exotic invasive species and protect other native species to increase reintroduction success. Close monitoring is needed during the initial stages of the reintroduction, and several reintroduction events from captive breeding facilities may also be necessary. When planning a reintroduction, it is critical to remove exotic species and make an effort to restore the habitat as close as possible to the original conditions. [ABSTRACT FROM AUTHOR]

Biotic interactions exerted by invasive species have a strong effect on ecosystems. Intraguild predation may contribute to the decline in the distribution, abundance and population size of native species and may facilitate the spread of non-native taxa. In this study, we investigated the feeding ecology of the invasive fish Amur sleeper (Perccottus glenii Dybowski, 1877) in a lowland watercourse, where it co-exists with the threatened native fish European mudminnow (Umbra krameri Walbaum, 1792). We used two sampling protocols that differed in the frequency of sampling time (e.g. monthly samplings and samplings in 10- day intervals) to provide evidence of predation, an interaction that may lead to the decline of mudminnow populations with the spread of the Amur sleeper. Aquatic macroinvertebrates comprised a major part of the diet for both sampling intervals. However, finer temporal resolution revealed the importance of fish, especially mudminnow juveniles, as a periodically available food source in the Amur sleeper's diet. A high degree of dietary overlap was found between the different size groups of the Amur sleeper, but larger specimens tended to feed on a relatively higher proportion of fish. Our results suggested that temporal resolution of stomach content analyses may largely determine inferences on the importance of predation on juvenile mudminnow. Overall, we found that intraguild predation could contribute to the decline of European mudminnow populations, which underscores the importance of effective control measures to prevent the further spread of the invasive Amur sleeper. [ABSTRACT FROM AUTHOR]

The complete mitochondrial genome sequences (mitogenomes) from 19 populations (originating from 15 localities) of Pseudorasbora pugnax, covering almost all known populations of the endangered species, were determined to clarify their genetic population structure and evolutionary history. The 211 cytochrome b (cytb) gene sequences indicated low intrapopulation genetic diversity, and each population had only one or two haplotypes. The 37 mitogenome sequences also indicated low intrapopulation diversity, and the haplotypes were unique to every population. The phylogenetic relationships among the mitogenomic haplotypes indicated three groups, including subgroups, and the groups and subgroups were distributed in different geographic areas. These results suggest that the unique haplotypes in each population had not been randomly fixed by recent population fragmentation of this species, and the geographic distribution reflects the historical population structure. The divergence time estimated by mitogenomic data indicates that the genetic divergence of mtDNA groups occurred in the Pleistocene. [ABSTRACT FROM AUTHOR]

Black bass Micropterus spp. stocked outside of their native range have often been implicated in declines of native fishes, but impacts of these stockings on native congeners have been examined less commonly and almost never in reservoirs. Relative abundance and creel data were obtained from seven reservoirs (632–13,156 ha) in four southeastern states where Alabama Bass M. henshalli had been illegally stocked. Genetics data for black bass were collected in nine more reservoirs in five southeastern states where similar introductions occurred. In each case, Alabama Bass introduction was swiftly followed by sweeping changes in the black bass composition. Largemouth Bass M. salmoides relative abundance declined by 42–77% after Alabama Bass introduction in four of five reservoirs, but total black bass relative abundance was unchanged in three of them, indicating that Alabama Bass essentially replaced Largemouth Bass. Alabama Bass or their hybrids dominated the black bass genetic sample in five of nine reservoirs, and pure specimens of non‐Alabama Bass species composed <50% of the sample in six of nine reservoirs. Smallmouth Bass M. dolomieu were virtually extirpated via hybridization with Alabama Bass in two of the study reservoirs, and genetically pure fish were rare in several others. These changes occurred over relatively short time intervals, often within 10 years after detection of Alabama Bass, stressing the need for continual vigilance via routine monitoring and a proactive public relations campaign to discourage and limit new introductions. The leading edge of the Alabama Bass invasion now encompasses several notable Smallmouth Bass fisheries in North Carolina and is on the border of numerous others in Tennessee, Virginia, and beyond. The spread of nonnative black bass, such as the Alabama Bass highlighted in this article, constitutes one of the greatest threats to conserving native black bass fisheries. [ABSTRACT FROM AUTHOR]

Chinese bahaba (Bahaba taipingensis) is a critically endangered fish species, which can produce sounds like other Sciaenidae species. In this study, sounds produced by sexually mature Chinese bahaba were recorded during the reproduction season for the first time. Two distinct types of sounds were observed during the reproduction season, termed as single drum and fast drum trains calls. Single drum callings occurred as a series of trains with rapid pulses, while fast drum trains callings were mainly made of a single signal. The single drum and fast drum trains had a peak frequency of 77.8 ± 16.2 Hz and 79.1 ± 8.7 Hz, respectively. Statistical analysis suggested significant differences in −3 dB bandwidth, signal duration, and root-mean-square sound pressure levels, except for peak frequency (p < 0.05) between single drum and fast drum trains sounds. Single drum occurred mainly before dawn (period range from 0:00 to 6:00 am) and less frequently after dusk (18:00–24:00 pm), and the fast drum trains occurred after dawn (6:00 am to 12:00 pm) and dusk (18:00 pm to 24:00 pm). Considering the abundance of Chinese bahaba has significantly declined, passive acoustic monitoring provides a non-invasive and low-cost effective tool to monitor sound production during reproduction season, which may help to facilitate aquaculture management and fishery population conservation in the future. [ABSTRACT FROM AUTHOR]

Regarding the maintenance of biodiversity and the stability of ecosystems, the taxonomy and conservation of endangered fish species are of paramount importance. This paper explores the many difficulties and tactics involved in defending these delicate aquatic species. Taxonomic ambiguity, data gaps, habitat degradation, overfishing, invasive species, pollution, and the overall effects of climate change are obstacles in this endeavor. The conservation and restoration of critical ecosystems are crucial for the survival of these species, and accurate species identification and thorough data are fundamental. Strategies for invasive species control, climate adaptability, and sustainable fisheries management are important. A comprehensive strategy for conservation must include money for research, international cooperation, and public education. In order to successfully solve these issues, scientists, policymakers, communities, and organizations must work together. We can ensure a more resilient and balanced aquatic environment for future generations by putting the suggested ideas into practice. By doing so, we can work towards protecting endangered fish species and the complex web of life they sustain. [ABSTRACT FROM AUTHOR]

The totoaba (Totoaba macdonaldi) is a sciaenid (croaker) fish endemic to the Gulf of California with high commercial importance. Because it was considered at risk of extinction (since 2021 it was reclassified as vulnerable by the IUCN), and aquaculture procedures were developed for restocking and commercial purposes. The present study was conducted with the hypothesis that the early stages of totoaba present depensatory individual growth and an observed variance-at-age modelling approach is the best way to parametrize growth. Ten models were tested including asymptotic, non-asymptotic, exponential-like, and power-like curves including a new one that represents a modification of Schnute's model. The model that best described the growth trajectory of larval and early juveniles of T. macdonaldi in a controlled environment is a sigmoid curve with two inflexions, related to changes in the feeding regime. [ABSTRACT FROM AUTHOR]

Online research methods are increasingly used in conservation science to monitor and collect data on online wildlife trade. Shark‐like rays (Rhinopristiformes) are among the most threatened vertebrates, prized for their high‐value fins while other uses for their derivatives are largely unrecognized in the literature. The bowmouth guitarfish (Rhina ancylostomus) is characterized by ridges of enlarged thorns, sometimes sold as amulets. Listed on the Convention on International Trade in Endangered Species of Wild Fauna and Flora (CITES) Appendix II, the thorn‐market has been ignored and undocumented. Using systematic, retrospective online searches, we recorded 977 bowmouth‐derivatives for sale. In our global and multi‐lingual scope, 97% of products were offered from Thailand, despite prohibited trade. 98% of all products were thorns (USD3‐300) and sold alongside high‐profile CITES‐listed taxa (e.g., tiger claws). Consistent advertisements from 2012 revealed a previously unquantified trade of an often‐neglected marketplace in elasmobranch research. Our findings offer insight into the drivers of the thorn trade, potentially rooted in cultural beliefs. Our accessible research methods can be applied internationally and across species, providing quantitative and qualitative insights on aspects of the wildlife trade of a critically endangered fish. Continued monitoring of online markets, like this study, is necessary to fill critical gaps for informed policy and species‐specific management. [ABSTRACT FROM AUTHOR]

Threatened fish populations worldwide are relying on stock supplementation by hatchery‐reared fish. Although stocking with non‐native fish may lead to hybridization, thereby disrupting local adaptations, it could also improve the adaptive potential of small populations by increasing variability in essential behavioral traits. In this study, we crossbred the critically endangered Finnish landlocked salmon with a geographically close Baltic anadromous salmon population to compare boldness‐related behavioral traits among the crossing groups. We studied postrelease exploration in seminatural streams and tested stress tolerance of the fish, as reflected by their response during swimming trials and commencement of feeding after the trials. In the stress tolerance experiments, we compared fish with different rearing backgrounds to gain insight into environmentally induced variability in stress tolerance. When compared with the anadromous salmon, the landlocked salmon showed more active postrelease exploration and higher stress tolerance. The hybrids displayed intermediate behaviors compared with the purebred salmon, indicating heritability of these traits. The landlocked salmon showed less variable exploration than the hybrids with anadromous salmon as the maternal strain, but we did not find rearing‐dependent responses in stress tolerance. In summary, our findings suggest that hybridization could help in reversing likely domestication‐related negative behavioral traits in the landlocked salmon. [ABSTRACT FROM AUTHOR]

Labeo victorianus (Boulenger, 1901) is one of the endemic fishes in Lake Victoria Basin (LVB) but is now threatened by multiple stressors caused by human activities. We investigated spatial and temporal variability in food composition and condition of L. victorianus in influent rivers of Lake Victoria, Kenya. Sampling was done during the dry and wet seasons by electrofishing. Food composition analysis showed that L. victorianus is a benthophagus and omnivorous species whose diet is dominated by detritus, periphyton and insects. There were differences in food composition among rivers, with significant river X season interactions (PERMANOVA F = 11.6, df = 4, p = 0.001), suggesting that the diet depended on prevailing environmental conditions. In turbid rivers, the diet was dominated by detritus while in less turbid rivers it was dominated by insects and periphyton. Sand and mud also formed a significant part of the diet, which was an indication of a limited occurrence of preferable food items. There were ontogenetic shifts in food composition (PERMANOVA F = 4.6, df = 3, p = 0.001), but also with a spatial interaction (PERMANOVA F = 5.6, df = 7, p = 0.001), further indicating the role of environmental conditions in determining the diet for different size classes. Interestingly, the fish condition did not differ among rivers. This study shows that turbidity and organic matter and nutrient loading determine the diet of L. victorianus in LVB rivers, and provides further justification for the maintenance of water quality as a conservation measure for threatened species. [ABSTRACT FROM AUTHOR]

Larvae (glochidia) of Unionida mussels form obligate symbiotic associations with host fish to complete their life-cycle. To identify previously unknown host fish associations for the threatened New Zealand Echyridella aucklandica, glochidia infestation on fish by two mussel species was quantified in four Waikato streams. A host for E. aucklandica was identified for the first time, with glochidia found to attach and encyst on the common smelt Retropinna retropinna but not on other fish species caught. In contrast, E. menziesii was found on a range of fish species but not on the two R. retropinna caught. Encysted E. aucklandica glochidia showed evidence of growth on the gills of host fish. These preliminary results provide critical knowledge of host–glochidia interactions in sympatric New Zealand unionid species to support integrated conservation management targeting both unionid communities and host fish populations. [ABSTRACT FROM AUTHOR]

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Appropriate fertilization practices play a crucial role in the maintenance of genetic diversity within captive fish broodstocks. We assessed the influence of in vitro storage of gametes (0-, 7- and 14-days post-stripping) at 1 °C on ovarian fluid pH, sperm motility, and embryo viability in the critically endangered Finnish landlocked salmon (Salmo salar m. sebago) population. A repeated full-factorial design used in both sperm-ovarian fluid activation analyses and fertilizations allowed us to separate the effects of female, male and their interaction on gamete quality and embryo survival across storage times. The ovarian fluid pH decreased most significantly during the first week of storage and showed considerable variation among females. The decrease of sperm motility varied across males, females and male–female (sperm-ovarian fluid) combinations. The mean proportion of viable embryos was initially 96.4%, but dropped to 45.5% after 7 days, and to 13.1% after 14 days of gamete storage. Embryo viability responses to gamete storage time predominantly increased among- and within-female variation but also showed major differences between female × male combinations (non-additive genetic effects). Interestingly, embryo viability showed virtually complete re-ranking (change of order) among full-sib families between the first two fertilization times (rs = − 0.03) but consistency between the first and last times (rs = 0.59). Overall, our results indicate that even when the primary aim is to maximize the genetic diversity of endangered fish populations, it may be advisable to prioritize minimal egg storage time rather than maximizing the number of parental combinations in fertilizations. [ABSTRACT FROM AUTHOR]

Sperm preservation is an efficient technique used for the recovery, conservation, and management of some endangered fish species. The present study was conducted to explore how preservation time would affect sperm and spawning performance in the endangered delta smelt (Hypomesus transpacificus). Sperm were preserved with the modified Hanks balanced salt solution at 14.7–16.9 °C. The Kruskal-Wallis test of sperm parameters using OpenCASA plugin in ImageJ software showed that sperm (n = 33♂) had significantly higher velocity and motility within the first 5 s after activation than that of other time points, while sperm had the lowest velocity and motility after 3 min post activation (P < 0.001). The findings (n = 30♂) also showed fresh sperm had higher velocity and motility than preserved sperm, while the sperm preserved for over 24 h showed a significantly low performance (P < 0.001). The nonlinear mixed effects models of fertilization results (n = 14♂ × 70♀) indicated the fresh sperm and sperm preserved for 1 h had higher fertilization rates than other preservation times (P < 0.001). The hatching rate (n = 14♂ × 70♀) also showed the fresh sperm and sperm preserved for 3 min and 1 h had higher hatching rates than other preservation times (P < 0.001). Overall, the study showed the best sperm performance in delta smelt was found within the first 5 s post activation, and the best fertilization and hatching rates were found when the sperm were fresh and preserved for 1 h. The findings of this study provide information for the first time about how long the delta smelt's sperm are motile for quality analysis, and how the preservation time can affect sperm quality, fertility, and hatching of this species for future applications. • Delta smelt sperm has the highest motility within the first 5 s after activation. • Fresh sperm has higher motility than the sperm preserved in the extender tested. • Best fertilization and hatching rates were found in fresh sperm and sperm preserved for 1 h. [ABSTRACT FROM AUTHOR]

The aim of this study was to test whether vitrification of sterlet Acipenser ruthenus and Russian sturgeon Acipenser gueldenstaedtii ovarian tissue through needle-immersed vitrification (NIV) is an efficient strategy for the preservation of oogonia (OOG) in order to supplement the current conservation efforts for these endangered fish species. Histological analyses of the gonads displayed that the ovaries of both species were immature and contained predominantly OOG and primary oocytes. The germline origin of these cells was verified by localization of the vasa protein through immunocytochemistry. NIV protocol was optimized by testing different equilibration (ES) and vitrification solutions (VS) containing various concentrations of dimethyl sulfoxide (Me 2 SO), propylene glycol (PG) or methanol (MeOH). In sterlet, the highest average viability (55.7 ± 11.5%) was obtained by using a combination of 1.5 M PG and 1.5 M Me 2 SO in the ES, and 1.5 M MeOH and 5.5 M Me 2 SO in the VS. In Russian sturgeon, the highest average viability (49.4 ± 17.1%) was obtained by using a combination of 1.5 M MeOH and 1.5 M Me 2 SO in the ES, and 3 M PG and 3 M Me 2 SO in the VS. To test whether vitrified/warmed OOG are functional, we have conducted an intra-specific transplantation assay to verify whether transplanted sterlet OOG will colonize the gonads of recipient fish. Fluorescently labelled cells were detected within recipient gonads at 2 and 3 months post-fertilization (mpf). Colonization rates of vitrified/warmed OOG (70% at 2 mpf and 61% at 3 mpf) were similar to those of fresh OOG (80% at 2 mpf and 70% at 3 mpf). This study has demonstrated that vitrification of ovarian tissue is an effective method for the preservation of OOG, and that the vitrified/warmed cells are functional and are able to colonize recipient gonads after transplantation similarly to the fresh cells. Since the vitrification procedure displayed in this study is simple and does not require complex and expensive laboratory equipment, it can be readily applied in field conditions, and therefore it can be invaluable for the conservation efforts of the critically endangered sturgeon species. However, care needs to be taken that despite the research conducted so far, donor-derived progeny was not yet obtained in sturgeons. • A vitrification procedure was optimized for sturgeon species for the first time. • Vitrification of sterlet and Russian sturgeon oogonia yielded ∼50% survival. • Vitrified/warmed oogonia incorporated into recipient gonads after transplantation. [ABSTRACT FROM AUTHOR]

Fish diversity of the Yarlung Zangbo River is very sensitive and vulnerable to biological invasion, anthropogenic activities and climate change, especially in the upper and middle reaches where several endemic fishes have become endangered and nearly ten invasive fishes have been established. Here, we used environmental DNA (eDNA) metabarcoding to monitor rare and invasive fishes, and to assess diversity in 25 sites from two wetlands (Lalu and Chabalang) and the main channel (YT), within the upper and middle reaches. To obtain a species-level resolution, we evaluated species discrimination potentials of three mitochondrial markers and found Cytb had the highest average genetic distance at each taxonomic level followed by COI and 12S. The 12S was unqualified for species assignment, as two species shared identical haplotypes. The newly designed Cytb primers used for metabarcoding showed an average mismatch of 0.28 and amplified well across species. In total, 8942 operational taxonomic units (OTUs) were obtained based on a 100% identity threshold, among which 98.1% were assigned to 24 fishes based on our custom-made database and the remaining were assigned to six fishes based on the NCBI nt database. Almost all captured fishes were detected by the eDNA method except for two species. However, 12 fishes detected by the eDNA method were not listed in catch data for several sites, including one endangered species (Oxygymnocypris stewartii), four previously recorded non-native species and two unrecorded non-native species (Monopterus albus and Siniperca chuatsi). The alpha diversities estimated by eDNA and capture-based methods were correlated for sites at Lalu. Both methods revealed significant differences in community composition between YT and the wetlands. Our results provide both basic information for conservation and management of rare and invasive fishes in the Yarlung Zangbo River and a framework of fish eDNA metabarcoding with a species-level resolution. [ABSTRACT FROM AUTHOR]

Introduction: Tlaloc hildebrandi is a freshwater killifish, endemic to Southern Mexico and under threat of extinction; the knowledge of the trophic morphology and diet is needed by conservation managers. Objective: To analyse and describe the anatomy of the visceral skeleton, visceral musculature, digestive tract and its adjoining glands of T. hildebrandi; as well as its diet. Methods: We performed the trophic anatomy on 20 adult specimens of both sexes, through manual dissection; as well as gut content analysis in 60 individuals to describe the diet. Results: As notable characters of the visceral skeleton of T. hildebrandi we found the posterior notch of the premaxillary, the presence of the "coronoid cartilage", the tricuspid shape of the gill rakers of the first branchial arch, and the presence of the coronomeckelian bone; some outstanding characters of the visceral musculature are the origin of the retractor dorsalis muscle from the first four vertebral centra, and the division of the pharyngoclavicularis externus muscle into two sections. The notable characters of the digestive tube are the absence of stomach and pyloric caeca, and the presence of the "intestinal valve". Insects (IVI = 66.6 %) and ostracods (13 % IVI) were the dominant prey items of the Tlaloc hildebrandi diet; larvae and adults of the family Chironomidae were the most dominant insects in the diet (53 % IVI). Conclusions: The organization of the digestive system of T. hildebrandi corresponds to the general morphologic pattern of the Cyprinodontiformes; however, we register as new information for these fish, the presence of the "coronoid cartilage" and the "intestinal valve". The structures of the trophic morphology and the components of the diet, confirms us that T. hildebrandi is a carnivorous-insectivorous fish. [ABSTRACT FROM AUTHOR]

In this study, which was carried out in the Karaburun-Ildır Bay Special Environmental Protected Area (SEPA) and adjacent waters, the diversity of marine macrofauna and the structure of demersal assemblages were investigated. The samplings were carried out in May 2022 and September 2022. A total of 179 species were identified (121 fish, 58 invertebrates). Penaeus pulchricaudatus, Bregmaceros nectabanus, Champsodon nudivittis, Callionymus filamentosus and Planiliza haematocheilus are non-indigenous species in the study area. Raja radula, Mustelus mustelus, Thunnus thynnus and Epinephelus marginatus are among the threatened fishes in the IUCN Red List. The analysis on demersal community showed that demersal assemblage of the shallow shelf was different from the assemblage of the upper slope and diversity is higher on the shallow shelf than on the upper slope. Species assemblages include commercial species such as Merluccius merluccius, Parapenaeus longirostris, and Mullus barbatus. [ABSTRACT FROM AUTHOR]

Alburnoides petrubanarescui is endemic to the Urmia Lake basin, shared by Iran and Turkey. Previously, the species was found in several rivers in this basin, however, it is currently only found in the upper part of the Nazlu Chay River. The species' extent of occurrence (EOO), which was previously estimated to be 20.000 km2, is now 300 km2. Over the past three generations (10 years), the EOO of Urmia spirlin has decreased by 98%, however, the population of the Nazlu River is stable, and there is no strong evidence to suggest that the population will decline in the future. Drought and water abstraction cause the species' population to reduce. Dam building and river pollution reduce their range, making them vulnerable to extinction. Therefore, we classified the species as Vulnerable D2. [ABSTRACT FROM AUTHOR]

Food adulteration is one of the most serious problems regarding food safety and quality worldwide. Besides misleading consumers, it poses a considerable health risk associated with the potential non-labeled allergen content. Fish and fish products are one of the most expensive and widely traded commodities, which predisposes them to being adulterated. Among all fraud types, replacing high-quality or rare fish with a less valuable species predominates. Because fish differ in their allergen content, specifically the main one, parvalbumin, their replacement can endanger consumers. This underlines the need for reliable, robust control systems for fish species identification. Various methods may be used for the aforementioned purpose. DNA-based methods are favored due to the characteristics of the target molecule, DNA, which is heat resistant, and the fact that through its sequencing, several other traits, including the recognition of genetic modifications, can be determined. Thus, they are considered to be powerful tools for identifying cases of food fraud. In this review, the major DNA-based methods applicable for fish meat and product authentication and their commercial applications are discussed, the possibilities of detecting genetic modifications in fish are evaluated, and future trends are highlighted, emphasizing the need for comprehensive and regularly updated online database resources. [ABSTRACT FROM AUTHOR]

Shark-like rays (order Rhinopristiformes) are among the most threatened cartilaginous fish globally. Despite this, unresolved taxonomic issues still exist within the group. To date, no studies have used complete mitochondrial genomes to assess the phylogenetic placement of Acroteriobatus within the non-monophyletic family Rhinobatidae. The current study reports the first complete mitochondrial genomes for Acroteriobatus annulatus and A. blochii. Similar to other rhinopristiforms, the complete sequences of A. annulatus (16,773 bp) and A. blochii (16,771 bp) were circular molecules with gene organisations identical to that of the typical vertebrate mitogenome. The A + T content was higher than the G + C content, with a bias towards A and C nucleotides observed in all complete mitogenomes. The stem-and-loop secondary structures of the putative origin of light-strand replication were found to have highly conserved synthesis and stem regions, with all substitutions and indels restricted to the loop structure. The ratios of non-synonymous to synonymous substitution rates indicated that purifying selection has been the dominant driver of evolution in rhinopristiform mitogenomes. Phylogenetic reconstructions placed Acroteriobatus as a sister-group to Rhinobatos , confirming its affiliation with the family Rhinobatidae. However, based on its apparent polyphyly with the aforementioned genera, the familial assignment of Pseudobatos is not fully resolved and requires further investigation. • The mitogenomes of A. annulatus and A. blochii were sequenced for the first time. • Mitogenomes of all rhinopristiforms had a positive AT-skew and negative GC-skew. • A 15 bp overlap between ND5 and ND6 was unique to the family Rhinidae. • The conserved synthesis motif of the O L was replaced by 3′-GGCCC-5′ in all species. • Acroteriobatus was placed as sister-group to Rhinobatos with high support. [ABSTRACT FROM AUTHOR]

Pseudopungtungia nigra is an endangered fish species endemic to South Korea with a narrow habitat range in the Geum River basin. Understanding their long-term distribution (25 years, 1997–2021) and breeding characteristics can contribute to the conservation and habitat management of endangered species in this area. We analyzed long-term data on environmental factors and fish in the Geum River and investigated the invading and spawning characteristics of P. nigra using underwater cameras. From the study results, P. nigra indicated no clear dispersion or decline trend in the Geum River. P. nigra exhibits brood parasitic behavior in the nest of Coreoperca herzi, another species found in the same region. C. herzi males protect their nests during the spawning period, and the eggs spawned by P. nigra in the nests of C. herzi are also protected by C. herzi. This high dependency of P. nigra on C. herzi possibly contributed to its distribution range in the Geum River basin. Habitat changes caused by anthropogenic interventions during the study period did not significantly affect the distribution of P. nigra. The results indicate that the distribution pattern of P. nigra is influenced by the distribution of sympatric fish species rather than environmental changes. [ABSTRACT FROM AUTHOR]

Monitoring the occurrence and distribution of rare fish species is essential, especially in a semi-closed basin such as the Mediterranean Sea. Biologically interesting species often represent fishing waste (being part of the by-catch) and therefore are not retained, leading to a huge gap in data collection. Here we report about the occurrence in the Ionian Sea of a Zu cristatus (Bonelli, 1819) specimen, a mesopelagic fish from the order Lampriformes considered rare in the whole Mediterranean basin. The sample was captured at a depth of 720 m off the coast of Noto (Sicily, Italy) by deep-sea longline fisheries. The biometrics and meristic data were compared with all the available data on specimens previously reported in the Mediterranean Sea. It is interesting to note that, among the few records in the literature, most reports mention a lower depth range for this species. In fact, it is quite known that juvenile specimens of Z. cristatus were frequently found in shallow waters, while information about the biology of the adult stage is scarce, indicating they would seem to prefer much deeper environments. Considering the difficulty to collect data on this rare fish, this contribution can help to improve the knowledge about its distribution. [ABSTRACT FROM AUTHOR]

Chinese sturgeon was an endangered cartilaginous fish. The success of artificial breeding has promoted it to a food fish and it is now beginning to provide a new source of cartilage for the extraction of chondroitin sulfate (CS). However, the structural characteristics of sturgeon CS from different tissues remain to be determined in more detail. In this study, CSs from the head, backbone, and fin cartilage of Chinese sturgeon were individually purified and characterized for the first time. The molecular weights, disaccharide compositions, and oligosaccharide sulfation patterns of these CSs are significantly different. Fin CS (SFCS), rich in GlcUAα1-3GalNAc(4S), has the biggest molecular weight (26.5 kDa). In contrast, head CS (SHCS) has a molecular weight of 21.0 kDa and is rich in GlcUAα1-3GalNAc(6S). Most features of backbone CS (SBCS) are between the former two. Other glycosaminoglycan impurities in these three sturgeon-derived CSs were lower than those in other common commercial CSs. All three CSs have no effect on the activity of thrombin or Factor Xa in the presence of antithrombin III. Hence, Chinese sturgeon cartilage is a potential source for the preparation of CSs with different features for food and pharmaceutical applications. [ABSTRACT FROM AUTHOR]

Spring floods trigger spawning in many native fishes of the desert Southwest (USA), but less is known about fish community response when native fishes are rare. Here, we document change to native and nonnative fish captures and instream habitat features following a decade-high flooding event (2019) in the Verde River (AZ) where native fish captures were rare in the years pre-flood. Using prepositioned areal electrofishing devices (PAEDs), we sampled the fish community at 90 sampling units pre-flood (2017) and resampled those same units post-flood (2019) to compare and identify changes to catch and habitat features. Relative abundance of native fishes increased from 0.6% pre-flood (0.01 fish/PAED) to 53.0% post-flood (1.66 fish/PAED) and was largely attributable to the presence of juvenile Roundtail Chub Gila robusta (≤ 70 mm total length (TL)) and juvenile Sonora Sucker Catostomus insignis (≤ 100 mm TL). Juvenile Desert Sucker Catostomus clarkii experienced a lesser increase. One adult native fish was captured in 2017 and adult native fishes were absent from 2019 sampling. The catch of adult/subadult Common Carp Cyprinus carpio (> 100 mm TL) declined; however, this could be related to reservoir management and not the flood. The abundance of all size-classes of Black Bass Micropterus spp., Red Shiner Cyprinella lutrensis and other nonnative fishes did not change. The majority (97%) of juvenile native fishes were captured at the uppermost sampling reach. A 54% reduction to canopy cover across all sampling reaches and an increase of fine sediments at the most downstream reach demonstrates how floods can restructure the river environment. This case-study adds evidence that protection of spring floods is vital to the persistence and recolonization of fishes native to the desert Southwest, especially where they are rare. The continued presence of nonnative species may preclude juvenile native fishes from recruiting to adults. [ABSTRACT FROM AUTHOR]

In the western United States, water allocation decisions often incorporate the needs of endangered fish. In the Klamath River basin, an understanding of temporal variation in annual survival rates of Shortnose Suckers Chasmistes brevirostris and Lost River Suckers Deltistes luxatus and their relation to environmental drivers is critical to water management and sucker recovery. Extinction risk is high for these fish because most individuals in the populations are approaching their maximum life span and recruitment of new fish into the adult populations has never exceeded mortality losses in the past 22 years. We used a time series of mark–recapture data from the years 1999–2021 to analyze the relationship between lake level, water quality covariates, and survival of adult Shortnose Suckers and two spawning populations of Lost River Suckers in Upper Klamath Lake, Oregon. We compared competing model hypotheses in a maximum likelihood framework using Akaike's information criterion and then ran the top environmental covariates in a Bayesian framework to estimate how much of the variation in survival was explained by these covariates as compared to random variation. The complementary analyses found almost unequivocal support for our base model without environmental covariates. Estimated adult sucker survival was high across the time series and consistent with sucker life history (mean annual survival = 0.82–0.91). This suggests that adult suckers were generally robust to interannual variation in lake levels as well as consistently poor water quality within the years of our data set. Recovery time is limited, as a declining survival trend for adult suckers in recent years may be due to the onset of senescence. The successful recovery of suckers in Upper Klamath Lake may rely on shifting research from the causes of adult mortality and its relationship with lake surface elevation to the causes of poor recruitment into adult populations. [ABSTRACT FROM AUTHOR]

Purposely introduced in 1879, Pacific coast Striped Bass Morone saxatilis once supported a commercial fishery and currently supports a recreational fishery in the San Francisco Estuary Watershed, CA, USA; however, the population has been in decline for decades. Since little is known about sub-adult behavior on the Pacific coast, we used acoustic telemetry to investigate seasonal movement patterns and habitat use across three regions (bay, delta, and river) and the effects of temperature and salinity on habitat use over a 2-year period. Sub-adult movement and habitat use differed by year and age. In spring, age-I and age-II sub-adults moved within the delta (60%), river (20%), and bay (20%) regions, and by summer, some individuals moved to the bay (36%), while others remained in the delta (42%) and river (22%). Fall and winter showed equal movement between the bay and delta regions. During year 2, age-II and age-III fish inhabited the bay region across all seasons with the exception of spring when a few individuals migrated up river. Generally, sub-adults did not inhabit the river region in fall or winter. Sub-adults were not detected in water temperatures < 10 °C and occurred most often in 20–25 °C. Younger sub-adults inhabited limnetic habitat where older fish inhabited mesohaline and polyhaline habitats. Our findings suggest that sub-adult seasonal movement patterns and habitat use hotspots have important fishery management implications and can be useful to address concerns over how this non-native fish's predation impacts native and endangered fishes. [ABSTRACT FROM AUTHOR]

Summary: Primordial germ cells transplantation is a unique approach for conservation and reconstitution of endangered fish species. This study aimed to establish techniques to culture dechorionated embryos in different incubation systems and also to determine anaesthetic concentration for fish recipients in the larval stage for subsequent primordial germ cell transplantation. Intact and dechorionated embryos were divided into three incubation systems: (1) a control group with manual replacement of the solution; (2) a closed environment with high oxygen with manual replacement of the solution; and (3) constant solution recirculation. This combination resulted in six treatments. For the evaluation of anaesthetics for larvae, the concentrations evaluated were 19.5 mM, 24.4 mM, 29.3 mM, and 34.2 mM of 2-phenoxyethanol. Anaesthesia concentration and recovery at different stages were evaluated. For transplantation, primordial germ cells of Astyanax altiparanae were transplanted into anaesthetised larvae (1 dph) of Prochilodus lineatus. Better results were obtained in the recirculation system for dechorionated embryos of P. lineatus for hatching (54.18%) and normal morphology (50.06%). The 2-phenoxyethanol anaesthetic with a dose of 29.3 mM resulted in shorter induction times, in addition to the recovery time between 5 and 10 min. By using this anaesthetic concentration at transplantation, GFP-positive cells were seen in two recipients, but the cells did not proliferate. This study established an effective incubation system for the development of the dechorionated embryo and determined an effective anaesthetic concentration for P. lineatus larvae. In addition, micromanipulation and transplantation of primordial germ cells in neotropical species were conducted for the first time. [ABSTRACT FROM AUTHOR]

Ophichthid eel genus Aplatophis includes two species restricted to the New World, one distributed in the western Atlantic (A. chauliodus) and the other in the tropical eastern Pacific (A. zorro). Aplatophis zorro is a little-known species that was described in Panama, Gulf of San Miguel, from the collection of a single mature male. This work constitutes the first record of the species in Colombian waters and extends its geographical distribution to more than 483 km south on the American continent. In addition, some morphometric variation of the species, which was only known from the Panamanian holotype, is provided. [ABSTRACT FROM AUTHOR]

Per- and polyfluoroalkyl substances (PFASs) are severely polluted in aquatic environments and can harm aquatic organisms. Due to the limitation of conducting toxicity experiments directly on threatened and endangered (T&E) species, their toxicity data is scarce, hindering accurate risk assessments. The development of computational toxicology makes it possible to assess the risk of pollutants to T&E fishes. This study innovatively combined machine learning models, including random forest (RF), artificial neural network (ANN), and XGBoost, and the QSAR-ICE model to predict chronic developmental toxicity data of PFASs to T&E fishes. Among these, the XGBoost model exhibited superior performance, with R2 of 0.95 and 0.81 for the training and testing sets, respectively. Internal and external validation further confirmed that the XGBoost model is robust and reliable. Subsequently, it was used to predict chronic developmental toxicity data for seven priority PFASs to T&E fishes in the Yangtze River. Acipenseridae fishes (e.g., Acipenser dabryanus and Acipenser sinensis) showed high sensitivity to PFASs, possibly due to their unique lifestyle and physiological characteristics. Based on these data, the predicted no-effect concentration (PNEC) of individual PFASs was calculated, and the risk for T&E fishes in the Yangtze River was assessed. The results indicated that the risk of PFASs to T&E fishes is low (3.85 × 10−9∼8.20 × 10−4), with perfluorohexanoic acid (PFHxA) and perfluorooctanoic acid (PFOA) as the high-risk pollutants. The risk in the middle and lower reaches of the river is higher than in the upper reaches. This study provides a new approach for obtaining chronic toxicity data and conducting risk assessments for T&E species, advancing the protection of T&E species worldwide. [Display omitted] • QSAR-ICE and machine learning were used to predict chronic toxicity for T&E fishes. • XGBoost fitted best for the chronic developmental toxicity of PFASs to T&E fishes. • Acipenseridae fishes are more sensitive to PFASs than other fishes. • Issued water quality criteria of PFOA and PFOS cannot protect T&E fish effectively. • Long-term developmental risk of PFASs to T&E fishes in the Yangtze River is low. [ABSTRACT FROM AUTHOR]

A 2019 photograph of a blue skate Dipturus batis caught in Welsh waters is the first species‐specific evidence of the "common skate" complex occurring in its former range in the main body of the Irish Sea over four decades after it was considered to have been extirpated there. This possible precursor to recolonisation of former range adds to growing evidence for the recovery of skate species in the North Atlantic and highlights the valuable role of anglers and social media as a complement to important, yet costly, scientific surveys when monitoring rare fishes. [ABSTRACT FROM AUTHOR]

Based on the morphological comparisons and molecular results, three new species of Homatula, i.e., H. geminusclathratus sp. nov., H. microcephala sp. nov., and H. longibarbatus sp. nov., have been described and named from the Lancang-jiang (the upper Mekong River) and the Chuan-he (the upper Black River, a tributary of the Red River) basins. The loaches of Homatula from the Lancang-jiang and the Chuan-he can be distinguished via morphology, genetics, and geographic distribution. All of the 10 recorded species distributed in the Nu-jiang (the upper Salween River), the Lancang-jiang, and the upper Black River share the following combination of character states: whole body, except head, densely scaled; lateral line complete; and a short adipose crest along the dorsal midline of the caudal peduncle, anteriorly not reaching vertically through the anal-fin origin. Species with these characters are called the densely-scaled group of Homatula. The three newly described species belong to the densely-scaled group of Homatula. Based on molecular phylogenetics, these Homatula species form a monophyletic group that can be divided into two clades, the densely-scaled group and the non-densely-scaled group. The densely-scaled group of Homatula includes 13 species occurring between the Nu-jiang and the upper Black River. The non-densely-scaled group is non-monophyletic and includes 14 species that are distributed in the Red, Pearl, Yangtze, and Yellow River basins. Species of the non-densely-scaled group are clustered into four sub-clades that are constrained to the four river basins. Homatula exclusively inhabits mountain streams with rapid or gentle currents, vauclusian springs, underground rivers connected to streams, and ditches near villages and farmland. No specimens of Homatula were collected from the main streams of Lixian-jiang, Lancang-jiang, and Nu-jiang as well as their large tributaries. Small environmental changes in the habitat of Homatula, such as water pollution or extensive human use, can lead to species/population extinction. Effective conservation of rare and endemic fishes, like loaches of Homatula, entails systematic observations and more targeted protection. [ABSTRACT FROM AUTHOR]

Dietary studies are critical for understanding foraging strategies and have important applications in conservation and habitat management. We applied a robust metabarcoding protocol to characterize the diet of the critically endangered freshwater fish Zingel asper (the Rhone streber). We conducted modelling and simulation analyses to identify and characterize some of the drivers of individual trophic trait variation in this species. We found that population density and ontogeny had minor effects on the trophic niche of Z. asper. Instead, our results suggest that the majority of trophic niche variation was driven by seasonal variation in ecological opportunity. The total trophic niche width of Z. asper seasonally expanded to include a broader range of prey. Furthermore, null model simulations revealed that the increase of between‐individual variation in autumn indicates that Z. asper become more opportunistic relative to summer and spring, rather than being associated with a seasonal specialization of individuals. Overall, our results suggest an adaptive variation of individual trophic traits in Z. asper: the species mainly consumes a few ephemeropteran taxa (Baetis fuscatus and Ecdyonurus) but seems to be capable of adapting its foraging strategy to maintain its body condition. This study illustrates how metabarcoding data obtained from faeces can be validated and combined with individual‐based modelling and simulation approaches to explore inter‐ and intrapopulational individual trophic traits variation and to test hypotheses in the conventional analytic framework of trophic ecology. [ABSTRACT FROM AUTHOR]

The European eel (Anguilla anguilla) is a catadromous species that inhabits the rivers of the Adriatic watershed in Croatia. It is a critically endangered fish species, according to the IUCN, due to its declining abundance in European rivers caused by overfishing and trafficking and by diseases caused by nematodes, pathogenic bacteria and viruses. An illegal parcel of glass eels was confiscated at the Zagreb Airport and was intended to re-populate Croatian rivers. Barcoding was employed to determine species affiliation, and a thorough health check was carried out. This study reports the evaluation of gross lesions, histological findings, and EVEX virus isolation and identification. Since the confiscated glass eels were of unknown origin and given the serological and genetic similarities of EVA and EVEX, we designed primers and probes for almost whole genome sequencing to elucidate the origin of glass eels based on viral phylogeny. Bayesian phylogeny showed that the isolated strain had the most common ancestor with a Danish isolate and likely evolved from the French isolate of EVEX. These findings are discussed in light of the divergence of recently isolated strains and their possible contribution to the decrease of the abundance of the European eel in European waters. [ABSTRACT FROM AUTHOR]

Here we report on new data on the occurrence and distribution of rare deep‐sea fishes (Teleostei) collected from off north‐eastern Brazil, including seamounts and oceanic islands of the Fernando de Noronha Ridge (Rocas Atoll and Fernando de Noronha Archipelago). Collections were made by the French RV Antea during the ABRACOS (Acoustics along the BRAzilian COaSt) expeditions between 29 September and 21 October 2015, and 9 April and 10 May 2017. Occurrences of Photostylus pycnopterus (Alepocephalidae), Gigantura chuni (Giganturidae), Ahliesaurus berryi (Notosudidae), Benthalbella infans, Rosenblattichthys hubbsi, Scopelarchoides danae (Scopelarchidae), Scopelengys tristis (Neoscopelidae), Zu cristatus (Trachipteridae), Stylephorus chordatus (Stylephoridae) and Pseudoscopelus cordilluminatus (Chiasmodontidae) are reported for the first time or confirmed in the Brazilian Exclusive Economic Zone. Photostylus pycnopterus and G. chuni are also recorded for the first time in the western South Atlantic, whereas records of P. cordilluminatus are the first in the western Atlantic. Other records of rare species of those families are also reported and discussed. [ABSTRACT FROM AUTHOR]

The Tonle Sap Lake in Cambodia supports several species of threatened megafish and contains one of the largest networks of freshwater fish reserves in the world. Despite these traits, this system remains understudied in terms of its utility for endangered fish conservation and restoration. This study was the first of a series of planned fish releases designed to test the effectiveness of conservation supplementation programs in the Tonle Sap Lake. In March 2022 (during the dry season), 1582 captive-reared fishes, including 1538 striped catfish Pangasianodon hypopthalmus, 42 giant barb Catlocarpio siamensis, and two Mekong giant catfish Pangasianodon gigas, were tagged and released into a 986-hectare fish reserve to assess post-release dispersal and survival. Brightly colored external tags with unique identification numbers were used to facilitate tag returns. A high-profile release event was held to raise awareness about the activity, bringing attention to the importance of fish reserves and endangered species conservation, and disseminating information about the research and tag return and reward program. This, in concert with other efforts, served to be an important education and outreach tool and increased tag return rates. We found that mortality from fishing was rapid and very high. Nineteen percent of released fishes were recaptured in the first 2 days after the fish release, and 46% were recaptured by day 83 after the release, indicating intense fishing pressure on the Tonle Sap Lake fisheries. Eighty percent of recaptured fishes were caught in stationary gill nets, most within 10 km of the release site. Fishing mortality rates were independent of fish size or source (pond-reared or cage-reared). Environmental DNA (eDNA) was found to be capable of detecting each of these species' presence in the water at the release site and could prove to be a useful tool for endangered species monitoring and restoration. Future research should explore alternative release timing, release location, and other methods of increasing post-release survival. Ultimately, underlying sources of mortality, especially fishing, will need to be addressed for conservation supplementation programs to succeed in the Tonle Sap Lake. Conservation supplementation should not be viewed as a substitute for more fundamental conservation measures, such as maintenance of environmental flows, preservation of ecological connectivity, and science-based fisheries management. [ABSTRACT FROM AUTHOR]

The current extinction crisis requires effective assessment and monitoring tools. Genetic approaches are appealing given the relative ease of field sampling required to estimate genetic diversity characteristics assumed related to population size, evolutionary potential, and extinction risk, and to evaluate hybridization with non‐native species simultaneously. However, linkages between population genetic metrics of diversity from survey‐style field collections and demographic estimates of population size and extinction risk are still in need of empirical examples, especially for remotely distributed species of conservation concern where the approach might be most beneficial. We capitalized on an exceptional opportunity to evaluate congruence between genetic diversity metrics and demographic‐based estimates of abundance and extinction risk from a comprehensive Multiple Population Viability Analysis (MPVA) in a threatened fish, the Lahontan cutthroat trout (LCT). We sequenced non‐native trout reference samples and recently collected and archived tissue samples of most remaining populations of LCT (N = 60) and estimated common genetic assessment metrics, predicting minimal hybridization with non‐native trout, low diversity, and declining diversity over time. We further hypothesized genetic metrics would correlate positively with MPVA‐estimated abundance and negatively with extinction probability. We uncovered several instances of hybridization that pointed to immediate management needs. After removing hybridized individuals, cautious interpretation of low effective population sizes (2–63) suggested reduced evolutionary potential for many LCT populations. Other genetic metrics did not decline over time nor correlate with MPVA‐based estimates of harmonic mean abundance or 30‐year extinction probability. Our results demonstrate benefits of genetic monitoring for efficiently detecting hybridization and, though genetic results were disconnected from demographic assessment of conservation status, they suggest reduced evolutionary potential and likely a higher conservation risk than currently recognized for this threatened fish. We emphasize that genetic information provides essential complementary insight, in addition to demographic information, for evaluating species status. [ABSTRACT FROM AUTHOR]

The Natura 2000 network in Poland comprises over a thousand Special Protection Areas (SPAs) for birds and Special Areas of Conservation (SACs) for habitats and plant and animal species. One of these animals is the fish species lake minnow, Eupallasella percnurus, which is highly endangered with extinction and under strict protection. Presently it occurs in 27 SACs at 73 sites, i.e., considerably fewer than in the previous decade, when it occurred in 35 SACs at about 100 sites. Since it is very likely that the decline in the number of E. percnurus sites will continue in coming years, serious doubts are raised concerning the perspectives for its conservation within the Natura 2000 network and throughout Poland. The major threat to the existence of its habitats is climate change resulting in water bodies drying up at accelerated rates. Introductions of predatory fish species also contribute to the extinction of E. percnurus populations. Obviously, preserving the occurrence of E. percnurus in Polish inland waters will require the wide-ranging use of active conservation measures with a special emphasis on the revitalization of its most valuable habitats. [ABSTRACT FROM AUTHOR]

Managers charged with recovering endangered species in regulated river segments often have limited flexibility to alter flow regimes and want estimates of the expected population benefits associated with both flow and nonflow management actions. Disentangling impacts on different life stages from concurrently applied actions is essential for determining the effectiveness of each action, but difficult without models that integrate multiple information sources. Here, we develop and fit an integrated population model for endangered Rio Grande Silvery Minnow (Hybognathus amarus) in the Middle Rio Grande, New Mexico. We integrate catch per unit effort monitoring data collected during 2002–2018 with population estimates, data collected during rescue of minnow from drying pools, habitat availability estimates, laboratory results, releases of hatchery reared minnow, and expert opinion. We use expert elicitation to develop a larval carrying capacity index as an informed proxy for the complex interactions among flow, habitat, and life history in this species. We evaluate the model using out‐of‐sample forecasts of 2019 and 2020, develop an algorithm to identify supplemental water releases that maximize benefits to the minnow, and quantify the effectiveness of various actions. Experts generally agreed on the duration and timing of flow requirements and disagreed regarding the importance of different magnitudes. The integrated model with the larval carrying capacity index outperformed two alternative models in forecasting catch in 2019 and 2020. The model estimates that minnow abundance varied by more than three orders of magnitude between 2002 and 2018 and that in a few years recruitment was limited by spawner abundance. Evaluation of the expected benefits of flow and nonflow management actions to fall population abundance across different years suggests that efficient addition of water to the base hydrograph is the most effective action in most, but not all years. Many actions are effective only under certain hydrologic and population conditions and the effectiveness of different actions varies in different sections of the study area. Widespread water extraction and river regulation combined with periodic drought and ongoing climate change may necessitate creative management of federally listed fish species in arid systems informed by thorough analyses of management effectiveness. [ABSTRACT FROM AUTHOR]

Predator naiveté has been invoked to explain the impacts of non-native predators on isolated populations that evolved with limited predation. Such impacts have been repeatedly observed for the endangered Pahrump poolfish, Empetrichthys latos, a desert fish species that evolved in isolation since the end of the Pleistocene. We tested Pahrump poolfish anti-predator responses to conspecific chemical alarm cues released from damaged epidermal tissue in terms of fish activity and water column position. Pahrump poolfish behavioural responses to conspecific alarm cues did not differ from responses to a dechlorinated tap water control. As a positive control, the well-studied fathead minnow, Pimephales promelas, showed significant alarm cue responses in terms of reduced activity and lowered water column position. The density of epidermal club cells, the presumptive source of alarm cues, was significantly lower in Pahrump poolfish relative to fathead minnows. Therefore, anti-predator competence mediated by conspecific alarm cues does not seem to be a component of the ecology of Pahrump poolfish. These findings provide a proximate mechanism for the vulnerability of Pahrump poolfish to non-native predators, with implications for the conservation and management of insular species. [ABSTRACT FROM AUTHOR]

The Russian sturgeon (Acipenser gueldenstaedtii, AG) is an endangered fish species increasingly raised on fish farms for black caviar. Understanding the process of sex determination in AG is, therefore, of scientific and commercial importance. AG lacks sexual dimorphism until sexual maturation and has a predominantly octoploid genome without a definite sex chromosome. A conserved short female-specific genomic sequence was recently described, leading to the development of a genetic sex marker. However, no biological function has been reported for this sequence. Thus, the mechanism of sex determination and the overall inter-sex genomic variation in AG are still unknown. To comprehensively analyze the inter-sex genomic variation and assess the overall inter-species variation between AG and A. ruthenus (AR, sterlet), a related tetraploid sturgeon species, we performed whole-genome sequencing on DNA from 10 fish-farm-raised adult AG (5 males and 5 females). We produced a partially assembled, ~2390 MBp draft genome for AG. We validated in AG the female-specific region previously described in AR. We identified ~2.8 million loci (SNP/indels) varying between the species, but only ~7400 sex-associated loci in AG. We mapped the sex-associated AG loci to the AR genome and identified 15 peaks of sex-associated variation (10 kb segments with 30 or more sex-associated variants), 1 of which matched the previously reported sex-variable region. Finally, we identified 14 known and predicted genes in proximity to these peaks. Our analysis suggests that one or more of these genes may have functional roles in sex determination and/or sexual differentiation in sturgeons. Further functional studies are required to elucidate these roles. [ABSTRACT FROM AUTHOR]

The determination of endangered species is problematic. If one considers a species to be ontological individuals, then if a species goes extinct, it is gone forever. The Brook Trout is used as an example of a "species" which may be comprised of several unique entities that warrant a specific status. In addition to determining the specific status, it is difficult to determine how to place a monetary value on endangered species that do not have a general appeal to the public (e.g., many bird species), a commercial value, no known medical properties (e.g., deep water sponges vs. cancer), or generate monies for recreation. Perhaps if we could identify the unique information carried by a particular species, we could place a value on that information and assess the monetary value of the information lost. [ABSTRACT FROM AUTHOR]