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211 results on '"Weigt, M."'

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101. Food sources for camptandriid crabs in an arid mangrove ecosystem of the Persian Gulf: a stable isotope approach.

102. Sparse generative modeling via parameter reduction of Boltzmann machines: Application to protein-sequence families.

103. On the effect of phylogenetic correlations in coevolution-based contact prediction in proteins.

104. Rbm10 facilitates heterochromatin assembly via the Clr6 HDAC complex.

105. Aligning biological sequences by exploiting residue conservation and coevolution.

106. FilterDCA: Interpretable supervised contact prediction using inter-domain coevolution.

107. An evolution-based model for designing chorismate mutase enzymes.

108. Statistical physics of interacting proteins: Impact of dataset size and quality assessed in synthetic sequences.

109. Predicting Interacting Protein Pairs by Coevolutionary Paralog Matching.

110. Structures of a dimodular nonribosomal peptide synthetase reveal conformational flexibility.

111. A multi-scale coevolutionary approach to predict interactions between protein domains.

112. Phylogenetic correlations can suffice to infer protein partners from sequences.

113. Selection of sequence motifs and generative Hopfield-Potts models for protein families.

114. The evolution of the temporal program of genome replication.

115. Inter-residue, inter-protein and inter-family coevolution: bridging the scales.

116. How Pairwise Coevolutionary Models Capture the Collective Residue Variability in Proteins?

117. Meet-U: Educating through research immersion.

118. Inverse statistical physics of protein sequences: a key issues review.

119. Mutator genomes decay, despite sustained fitness gains, in a long-term experiment with bacteria.

120. Large-scale identification of coevolution signals across homo-oligomeric protein interfaces by direct coupling analysis.

121. [From sequence variability to structural and functional prediction: modeling of homologous protein families].

122. Improving landscape inference by integrating heterogeneous data in the inverse Ising problem.

123. Direct coevolutionary couplings reflect biophysical residue interactions in proteins.

124. Simultaneous identification of specifically interacting paralogs and interprotein contacts by direct coupling analysis.

125. Inter-Protein Sequence Co-Evolution Predicts Known Physical Interactions in Bacterial Ribosomes and the Trp Operon.

126. Coevolutionary Landscape Inference and the Context-Dependence of Mutations in Beta-Lactamase TEM-1.

127. Direct-Coupling Analysis of nucleotide coevolution facilitates RNA secondary and tertiary structure prediction.

128. Fast and accurate multivariate Gaussian modeling of protein families: predicting residue contacts and protein-interaction partners.

129. Direct coupling analysis for protein contact prediction.

130. Global profiling of miRNAs and the hairpin precursors: insights into miRNA processing and novel miRNA discovery.

131. Improved contact prediction in proteins: using pseudolikelihoods to infer Potts models.

132. Perturbation biology: inferring signaling networks in cellular systems.

133. From principal component to direct coupling analysis of coevolution in proteins: low-eigenvalue modes are needed for structure prediction.

134. Structural basis of histidine kinase autophosphorylation deduced by integrating genomics, molecular dynamics, and mutagenesis.

135. Genomics-aided structure prediction.

136. Direct-coupling analysis of residue coevolution captures native contacts across many protein families.

137. Dissecting the specificity of protein-protein interaction in bacterial two-component signaling: orphans and crosstalks.

138. Structure-activity relationships of flavonoids as inhibitors of breast cancer resistance protein (BCRP).

139. Inference of sparse combinatorial-control networks from gene-expression data: a message passing approach.

140. Inference of direct residue contacts in two-component signaling.

141. Computational modeling of phosphotransfer complexes in two-component signaling.

142. High-resolution protein complexes from integrating genomic information with molecular simulation.

143. 3D-QSAR with the aid of pharmacophore search and docking-based alignments for farnesyltransferase inhibitors.

144. Clustering by soft-constraint affinity propagation: applications to gene-expression data.

145. Propagation of external regulation and asynchronous dynamics in random Boolean networks.

146. Message passing for vertex covers.

147. Statistical mechanics of combinatorial auctions.

148. Dibenzazecine compounds with a novel dopamine/5HT2A receptor profile and 3D-QSAR analysis.

149. Cavity approach to the random solid state.

150. Threshold values, stability analysis, and high-q asymptotics for the coloring problem on random graphs.

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