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101. A Catalog of the Highest-Energy Cosmic Rays Recorded During Phase I of Operation of the Pierre Auger Observatory

Author: The Pierre Auger Collaboration, Halim, A. Abdul, Abreu, P., Aglietta, M., Allekotte, I., Allison, P., Cheminant, K. Almeida, Almela, A., Alvarez-Muñiz, J., Yebra, J. Ammerman, Anastasi, G. A., Anchordoqui, L., Andrada, B., Andringa, S., Aramo, C., Ferreira, P. R. Araújo, Arnone, E., Velázquez, J. C. Arteaga, Asorey, H., Assis, P., Ave, M., Avila, G., Avocone, E., Badescu, A. M., Bakalova, A., Balaceanu, A., Barbato, F., Beatty, J., Bellido, J. A., Berat, C., Bertaina, M. E., Bertou, X., Bhatta, G., Biermann, P. L., Billoir, P., Binet, V., Bismark, K., Bister, T., Biteau, J., Blazek, J., Bleve, C., Blümer, J., Boháčová, M., Boncioli, D., Bonifazi, C., Arbeletche, L. Bonneau, Borodai, N., Brack, J., Bretz, T., Orchera, P. G. Brichetto, Briechle, F. L., Buchholz, P., Bueno, A., Buitink, S., Buscemi, M., Büsken, M., Bwembya, A., Caballero-Mora, K. S., Caccianiga, L., Caracas, I., Caruso, R., Castellina, A., Catalani, F., Cataldi, G., Cazon, L., Cerda, M., Cester, R., Chinellato, J. A., Chirinos, J., Chudoba, J., Chytka, L., Clay, R. W., Cerutti, A. C. Cobos, Colalillo, R., Coleman, A., Coluccia, M. R., Conceição, R., Condorelli, A., Consolati, G., Contreras, F., Convenga, F., Santos, D. Correia dos, Covault, C. E., Cristinziani, M., Sanchez, C. S. Cruz, Dasso, S., Daumiller, K., Dawson, B. R., de Almeida, R. M., de Jesús, J., de Jong, S. J., Neto, J. R. T. de Mello, De Mitri, I., de Oliveira, J., Franco, D. de Oliveira, de Palma, F., de Souza, V., De Vito, E., Del Popolo, A., Deligny, O., Deval, L., di Matteo, A., Dobre, M., Dobrigkeit, C., D'Olivo, J. C., Mendes, L. M. Domingues, Dorofeev, A., Anjos, R. C. dos, Ebr, J., Eman, M., Engel, R., Epicoco, I., Erdmann, M., Etchegoyen, A., Falcke, H., Farmer, J., Farrar, G., Fauth, A. C., Fazzini, N., Feldbusch, F., Fenu, F., Fick, B., Figueira, J. M., Filipčič, A., Fitoussi, T., Flaggs, B., Fodran, T., Fujii, T., Fuster, A., Galea, C., Galelli, C., García, B., Gemmeke, H., Gesualdi, F., Gherghel-Lascu, A., Ghia, P. L., Giaccari, U., Giammarchi, M., Glombitza, J., Gobbi, F., Gollan, F., Golup, G., Berisso, M. Gómez, Vitale, P. F. Gómez, Gongora, J. P., González, J. M., González, N., Goos, I., Góra, D., Gorgi, A., Gottowik, M., Grubb, T. D., Guarino, F., Guedes, G. P., Guido, E., Hahn, S., Hamal, P., Hampel, M. R., Hansen, P., Harari, D., Harton, J., Harvey, V. M., Haungs, A., Hebbeker, T., Heck, D., Hojvat, C., Hörandel, J. R., Horvath, P., Hrabovský, M., Huege, T., Insolia, A., Isar, P. G., Janecek, P., Johnsen, J. A., Jurysek, J., Kääpä, A., Kampert, K. H., Keilhauer, B., Khakurdikar, A., Covilakam, V. V. Kizakke, Klages, H. O., Kleifges, M., Kleinfeller, J., Knapp, F., Knapp, J., Kunka, N., Lachaud, C., Lago, B. L., Langner, N., de Oliveira, M. A. Leigui, Lenok, V., Letessier-Selvon, A., Lhenry-Yvon, I., Presti, D. Lo, Lopes, L., López, R., Lu, L., Luce, Q., Lundquist, J. P., Payeras, A. Machado, Mandat, D., Manning, B. C., Manshanden, J., Mantsch, P., Marafico, S., Mariani, F. M., Mariazzi, A. G., Mariş, I. C., Marsella, G., Martello, D., Martinelli, S., Bravo, O. Martínez, Martins, M. A., Mastrodicasa, M., Mathes, H. J., Matthews, J., Matthiae, G., Mayotte, E., Mayotte, S., Mazur, P. O., Medina-Tanco, G., Meinert, J., Melo, D., Menshikov, A., Michal, S., Micheletti, M. I., Miramonti, L., Mollerach, S., Montanet, F., Morejon, L., Morello, C., Müller, A. L., Mulrey, K., Mussa, R., Muzio, M., Namasaka, W. M., Nasr-Esfahani, A., Nellen, L., Nicora, G., Niculescu-Oglinzanu, M., Niechciol, M., Nitz, D., Norwood, I., Nosek, D., Novotny, V., Nožka, L., Nucita, A, Núñez, L. A., Oliveira, C., Palatka, M., Pallotta, J., Parente, G., Parra, A., Pawlowsky, J., Pech, M., Pękala, J., Pelayo, R., Martins, E. E. Pereira, Armand, J. Perez, Bertolli, C. Pérez, Perrone, L., Petrera, S., Petrucci, C., Pierog, T., Pimenta, M., Platino, M., Pont, B., Pothast, M., Shavar, M. Pourmohammad, Privitera, P., Prouza, M., Puyleart, A., Querchfeld, S., Rautenberg, J., Ravignani, D., Reininghaus, M., Ridky, J., Riehn, F., Risse, M., Rizi, V., de Carvalho, W. Rodrigues, Rojo, J. Rodriguez, Roncoroni, M. J., Rossoni, S., Roth, M., Roulet, E., Rovero, A. C., Ruehl, P., Saftoiu, A., Saharan, M., Salamida, F., Salazar, H., Salina, G., Gomez, J. D. Sanabria, Sánchez, F., Santos, E. M., Santos, E., Sarazin, F., Sarmento, R., Sato, R., Savina, P., Schäfer, C. M., Scherini, V., Schieler, H., Schimassek, M., Schimp, M., Schlüter, F., Schmidt, D., Scholten, O., Schoorlemmer, H., Schovánek, P., Schröder, F. G., Schulte, J., Schulz, T., Sciutto, S. J., Scornavacche, M., Segreto, A., Sehgal, S., Shivashankara, S. U., Sigl, G., Silli, G., Sima, O., Smau, R., Šmída, R., Sommers, P., Soriano, J. F., Squartini, R., Stadelmaier, M., Stanca, D., Stanič, S., Stasielak, J., Stassi, P., Straub, M., Streich, A., Suárez-Durán, M., Suomijärvi, T., Supanitsky, A. D., Szadkowski, Z., Tapia, A., Taricco, C., Timmermans, C., Tkachenko, O., Tobiska, P., Peixoto, C. J. Todero, Tomé, B., Torrès, Z., Travaini, A., Travnicek, P., Trimarelli, C., Tueros, M., Ulrich, R., Unger, M., Vaclavek, L., Vacula, M., Galicia, J. F. Valdés, Valore, L., Varela, E., Vásquez-Ramírez, A., Veberič, D., Ventura, C., Quispe, I. D. Vergara, Verzi, V., Vicha, J., Cendejas, L. M. Villaseñor, Vink, J., Vorobiov, S., Watanabe, C., Watson, A. A., Weindl, A., Wiencke, L., Wilczyński, H., Wittkowski, D., Wundheiler, B., Younk, P., Yushkov, A., Zapparrata, O., Zas, E., Zavrtanik, D., and Zavrtanik, M.
Subjects: Astrophysics - High Energy Astrophysical Phenomena, Astrophysics - Instrumentation and Methods for Astrophysics
Abstract: A catalog containing details of the highest-energy cosmic rays recorded through the detection of extensive air-showers at the Pierre Auger Observatory is presented with the aim of opening the data to detailed examination. Descriptions of the 100 showers created by the highest-energy particles recorded between 1 January 2004 and 31 December 2020 are given for cosmic rays that have energies in the range 78 EeV to 166 EeV. Details are also given of a further nine very-energetic events that have been used in the calibration procedure adopted to determine the energy of each primary. A sky plot of the arrival directions of the most energetic particles is shown. No interpretations of the data are offered., Comment: Article accepted for publication in ApJS
Published: 2022

102. Error estimate of the Non-Intrusive Reduced Basis (NIRB) two-grid method with parabolic equations

Author: Grosjean, Elise and Maday, Yvon
Subjects: Mathematics - Numerical Analysis
Abstract: Reduced Basis Methods (RBMs) are frequently proposed to approximate parametric problem solutions. They can be used to calculate solutions for a large number of parameter values (e.g. for parameter fitting) as well as to approximate a solution for a new parameter value (e.g. real time approximation with a very high accuracy). They intend to reduce the computational costs of High Fidelity (HF) codes. We will focus on the Non-Intrusive Reduced Basis (NIRB) two-grid method. Its main advantage is that it uses the HF code exclusively as a "black-box," as opposed to other so-called intrusive methods that require code modification. This is very convenient when the HF code is a commercial one that has been purchased, as is frequently the case in the industry. The effectiveness of this method relies on its decomposition into two stages, one offline (classical in most RBMs as presented above) and one online. The offline part is time-consuming but it is only performed once. On the contrary, the specificity of this NIRB approach is that, during the online part, it solves the parametric problem on a coarse mesh only and then improves its precision. As a result, it is significantly less expensive than a HF evaluation. This method has been originally developed for elliptic equations with finite elements and has since been extended to finite volume. In this paper, we extend the NIRB two-grid method to parabolic equations. We recover optimal estimates in $L^{\infty}(0,T;H^1(\Omega))$ using as a model problem, the heat equation. Then, we present numerical results on the heat equation and on the Brusselator problem.
Published: 2022

103. BLOOM: A 176B-Parameter Open-Access Multilingual Language Model

Author: Workshop, BigScience, Scao, Teven Le, Fan, Angela, Akiki, Christopher, Pavlick, Ellie, Ilić, Suzana, Hesslow, Daniel, Castagné, Roman, Luccioni, Alexandra Sasha, Yvon, François, Gallé, Matthias, Tow, Jonathan, Rush, Alexander M., Biderman, Stella, Webson, Albert, Ammanamanchi, Pawan Sasanka, Wang, Thomas, Sagot, Benoît, Muennighoff, Niklas, del Moral, Albert Villanova, Ruwase, Olatunji, Bawden, Rachel, Bekman, Stas, McMillan-Major, Angelina, Beltagy, Iz, Nguyen, Huu, Saulnier, Lucile, Tan, Samson, Suarez, Pedro Ortiz, Sanh, Victor, Laurençon, Hugo, Jernite, Yacine, Launay, Julien, Mitchell, Margaret, Raffel, Colin, Gokaslan, Aaron, Simhi, Adi, Soroa, Aitor, Aji, Alham Fikri, Alfassy, Amit, Rogers, Anna, Nitzav, Ariel Kreisberg, Xu, Canwen, Mou, Chenghao, Emezue, Chris, Klamm, Christopher, Leong, Colin, van Strien, Daniel, Adelani, David Ifeoluwa, Radev, Dragomir, Ponferrada, Eduardo González, Levkovizh, Efrat, Kim, Ethan, Natan, Eyal Bar, De Toni, Francesco, Dupont, Gérard, Kruszewski, Germán, Pistilli, Giada, Elsahar, Hady, Benyamina, Hamza, Tran, Hieu, Yu, Ian, Abdulmumin, Idris, Johnson, Isaac, Gonzalez-Dios, Itziar, de la Rosa, Javier, Chim, Jenny, Dodge, Jesse, Zhu, Jian, Chang, Jonathan, Frohberg, Jörg, Tobing, Joseph, Bhattacharjee, Joydeep, Almubarak, Khalid, Chen, Kimbo, Lo, Kyle, Von Werra, Leandro, Weber, Leon, Phan, Long, allal, Loubna Ben, Tanguy, Ludovic, Dey, Manan, Muñoz, Manuel Romero, Masoud, Maraim, Grandury, María, Šaško, Mario, Huang, Max, Coavoux, Maximin, Singh, Mayank, Jiang, Mike Tian-Jian, Vu, Minh Chien, Jauhar, Mohammad A., Ghaleb, Mustafa, Subramani, Nishant, Kassner, Nora, Khamis, Nurulaqilla, Nguyen, Olivier, Espejel, Omar, de Gibert, Ona, Villegas, Paulo, Henderson, Peter, Colombo, Pierre, Amuok, Priscilla, Lhoest, Quentin, Harliman, Rheza, Bommasani, Rishi, López, Roberto Luis, Ribeiro, Rui, Osei, Salomey, Pyysalo, Sampo, Nagel, Sebastian, Bose, Shamik, Muhammad, Shamsuddeen Hassan, Sharma, Shanya, Longpre, Shayne, Nikpoor, Somaieh, Silberberg, Stanislav, Pai, Suhas, Zink, Sydney, Torrent, Tiago Timponi, Schick, Timo, Thrush, Tristan, Danchev, Valentin, Nikoulina, Vassilina, Laippala, Veronika, Lepercq, Violette, Prabhu, Vrinda, Alyafeai, Zaid, Talat, Zeerak, Raja, Arun, Heinzerling, Benjamin, Si, Chenglei, Taşar, Davut Emre, Salesky, Elizabeth, Mielke, Sabrina J., Lee, Wilson Y., Sharma, Abheesht, Santilli, Andrea, Chaffin, Antoine, Stiegler, Arnaud, Datta, Debajyoti, Szczechla, Eliza, Chhablani, Gunjan, Wang, Han, Pandey, Harshit, Strobelt, Hendrik, Fries, Jason Alan, Rozen, Jos, Gao, Leo, Sutawika, Lintang, Bari, M Saiful, Al-shaibani, Maged S., Manica, Matteo, Nayak, Nihal, Teehan, Ryan, Albanie, Samuel, Shen, Sheng, Ben-David, Srulik, Bach, Stephen H., Kim, Taewoon, Bers, Tali, Fevry, Thibault, Neeraj, Trishala, Thakker, Urmish, Raunak, Vikas, Tang, Xiangru, Yong, Zheng-Xin, Sun, Zhiqing, Brody, Shaked, Uri, Yallow, Tojarieh, Hadar, Roberts, Adam, Chung, Hyung Won, Tae, Jaesung, Phang, Jason, Press, Ofir, Li, Conglong, Narayanan, Deepak, Bourfoune, Hatim, Casper, Jared, Rasley, Jeff, Ryabinin, Max, Mishra, Mayank, Zhang, Minjia, Shoeybi, Mohammad, Peyrounette, Myriam, Patry, Nicolas, Tazi, Nouamane, Sanseviero, Omar, von Platen, Patrick, Cornette, Pierre, Lavallée, Pierre François, Lacroix, Rémi, Rajbhandari, Samyam, Gandhi, Sanchit, Smith, Shaden, Requena, Stéphane, Patil, Suraj, Dettmers, Tim, Baruwa, Ahmed, Singh, Amanpreet, Cheveleva, Anastasia, Ligozat, Anne-Laure, Subramonian, Arjun, Névéol, Aurélie, Lovering, Charles, Garrette, Dan, Tunuguntla, Deepak, Reiter, Ehud, Taktasheva, Ekaterina, Voloshina, Ekaterina, Bogdanov, Eli, Winata, Genta Indra, Schoelkopf, Hailey, Kalo, Jan-Christoph, Novikova, Jekaterina, Forde, Jessica Zosa, Clive, Jordan, Kasai, Jungo, Kawamura, Ken, Hazan, Liam, Carpuat, Marine, Clinciu, Miruna, Kim, Najoung, Cheng, Newton, Serikov, Oleg, Antverg, Omer, van der Wal, Oskar, Zhang, Rui, Zhang, Ruochen, Gehrmann, Sebastian, Mirkin, Shachar, Pais, Shani, Shavrina, Tatiana, Scialom, Thomas, Yun, Tian, Limisiewicz, Tomasz, Rieser, Verena, Protasov, Vitaly, Mikhailov, Vladislav, Pruksachatkun, Yada, Belinkov, Yonatan, Bamberger, Zachary, Kasner, Zdeněk, Rueda, Alice, Pestana, Amanda, Feizpour, Amir, Khan, Ammar, Faranak, Amy, Santos, Ana, Hevia, Anthony, Unldreaj, Antigona, Aghagol, Arash, Abdollahi, Arezoo, Tammour, Aycha, HajiHosseini, Azadeh, Behroozi, Bahareh, Ajibade, Benjamin, Saxena, Bharat, Ferrandis, Carlos Muñoz, McDuff, Daniel, Contractor, Danish, Lansky, David, David, Davis, Kiela, Douwe, Nguyen, Duong A., Tan, Edward, Baylor, Emi, Ozoani, Ezinwanne, Mirza, Fatima, Ononiwu, Frankline, Rezanejad, Habib, Jones, Hessie, Bhattacharya, Indrani, Solaiman, Irene, Sedenko, Irina, Nejadgholi, Isar, Passmore, Jesse, Seltzer, Josh, Sanz, Julio Bonis, Dutra, Livia, Samagaio, Mairon, Elbadri, Maraim, Mieskes, Margot, Gerchick, Marissa, Akinlolu, Martha, McKenna, Michael, Qiu, Mike, Ghauri, Muhammed, Burynok, Mykola, Abrar, Nafis, Rajani, Nazneen, Elkott, Nour, Fahmy, Nour, Samuel, Olanrewaju, An, Ran, Kromann, Rasmus, Hao, Ryan, Alizadeh, Samira, Shubber, Sarmad, Wang, Silas, Roy, Sourav, Viguier, Sylvain, Le, Thanh, Oyebade, Tobi, Le, Trieu, Yang, Yoyo, Nguyen, Zach, Kashyap, Abhinav Ramesh, Palasciano, Alfredo, Callahan, Alison, Shukla, Anima, Miranda-Escalada, Antonio, Singh, Ayush, Beilharz, Benjamin, Wang, Bo, Brito, Caio, Zhou, Chenxi, Jain, Chirag, Xu, Chuxin, Fourrier, Clémentine, Periñán, Daniel León, Molano, Daniel, Yu, Dian, Manjavacas, Enrique, Barth, Fabio, Fuhrimann, Florian, Altay, Gabriel, Bayrak, Giyaseddin, Burns, Gully, Vrabec, Helena U., Bello, Imane, Dash, Ishani, Kang, Jihyun, Giorgi, John, Golde, Jonas, Posada, Jose David, Sivaraman, Karthik Rangasai, Bulchandani, Lokesh, Liu, Lu, Shinzato, Luisa, de Bykhovetz, Madeleine Hahn, Takeuchi, Maiko, Pàmies, Marc, Castillo, Maria A, Nezhurina, Marianna, Sänger, Mario, Samwald, Matthias, Cullan, Michael, Weinberg, Michael, De Wolf, Michiel, Mihaljcic, Mina, Liu, Minna, Freidank, Moritz, Kang, Myungsun, Seelam, Natasha, Dahlberg, Nathan, Broad, Nicholas Michio, Muellner, Nikolaus, Fung, Pascale, Haller, Patrick, Chandrasekhar, Ramya, Eisenberg, Renata, Martin, Robert, Canalli, Rodrigo, Su, Rosaline, Su, Ruisi, Cahyawijaya, Samuel, Garda, Samuele, Deshmukh, Shlok S, Mishra, Shubhanshu, Kiblawi, Sid, Ott, Simon, Sang-aroonsiri, Sinee, Kumar, Srishti, Schweter, Stefan, Bharati, Sushil, Laud, Tanmay, Gigant, Théo, Kainuma, Tomoya, Kusa, Wojciech, Labrak, Yanis, Bajaj, Yash Shailesh, Venkatraman, Yash, Xu, Yifan, Xu, Yingxin, Xu, Yu, Tan, Zhe, Xie, Zhongli, Ye, Zifan, Bras, Mathilde, Belkada, Younes, and Wolf, Thomas
Subjects: Computer Science - Computation and Language
Abstract: Large language models (LLMs) have been shown to be able to perform new tasks based on a few demonstrations or natural language instructions. While these capabilities have led to widespread adoption, most LLMs are developed by resource-rich organizations and are frequently kept from the public. As a step towards democratizing this powerful technology, we present BLOOM, a 176B-parameter open-access language model designed and built thanks to a collaboration of hundreds of researchers. BLOOM is a decoder-only Transformer language model that was trained on the ROOTS corpus, a dataset comprising hundreds of sources in 46 natural and 13 programming languages (59 in total). We find that BLOOM achieves competitive performance on a wide variety of benchmarks, with stronger results after undergoing multitask prompted finetuning. To facilitate future research and applications using LLMs, we publicly release our models and code under the Responsible AI License.
Published: 2022

104. Constraining the sources of ultra-high-energy cosmic rays across and above the ankle with the spectrum and composition data measured at the Pierre Auger Observatory

Author: The Pierre Auger Collaboration, Halim, A. Abdul, Abreu, P., Aglietta, M., Allekotte, I., Cheminant, K. Almeida, Almela, A., Alvarez-Muñiz, J., Yebra, J. Ammerman, Anastasi, G. A., Anchordoqui, L., Andrada, B., Andringa, S., Aramo, C., Ferreira, P. R. Araújo, Arnone, E., Velázquez, J. C. Arteaga, Asorey, H., Assis, P., Avila, G., Avocone, E., Badescu, A. M., Bakalova, A., Balaceanu, A., Barbato, F., Bellido, J. A., Berat, C., Bertaina, M. E., Bhatta, G., Biermann, P. L., Binet, V., Bismark, K., Bister, T., Biteau, J., Blazek, J., Bleve, C., Blümer, J., Boháčová, M., Boncioli, D., Bonifazi, C., Arbeletche, L. Bonneau, Borodai, N., Brack, J., Bretz, T., Orchera, P. G. Brichetto, Briechle, F. L., Buchholz, P., Bueno, A., Buitink, S., Buscemi, M., Büsken, M., Bwembya, A., Caballero-Mora, K. S., Caccianiga, L., Caracas, I., Caruso, R., Castellina, A., Catalani, F., Cataldi, G., Cazon, L., Cerda, M., Chinellato, J. A., Chudoba, J., Chytka, L., Clay, R. W., Cerutti, A. C. Cobos, Colalillo, R., Coleman, A., Coluccia, M. R., Conceição, R., Condorelli, A., Consolati, G., Conte, M., Contreras, F., Convenga, F., Santos, D. Correia dos, Covault, C. E., Cristinziani, M., Sanchez, C. S. Cruz, Dasso, S., Daumiller, K., Dawson, B. R., de Almeida, R. M., de Jesús, J., de Jong, S. J., Neto, J. R. T. de Mello, De Mitri, I., de Oliveira, J., Franco, D. de Oliveira, de Palma, F., de Souza, V., De Vito, E., Del Popolo, A., Deligny, O., Deval, L., di Matteo, A., Dobre, M., Dobrigkeit, C., D'Olivo, J. C., Mendes, L. M. Domingues, Anjos, R. C. dos, Ebr, J., Eman, M., Engel, R., Epicoco, I., Erdmann, M., Etchegoyen, A., Falcke, H., Farmer, J., Farrar, G., Fauth, A. C., Fazzini, N., Feldbusch, F., Fenu, F., Fick, B., Figueira, J. M., Filipčič, A., Fitoussi, T., Flaggs, B., Fodran, T., Fujii, T., Fuster, A., Galea, C., Galelli, C., García, B., Gemmeke, H., Gesualdi, F., Gherghel-Lascu, A., Ghia, P. L., Giaccari, U., Giammarchi, M., Glombitza, J., Gobbi, F., Gollan, F., Golup, G., Berisso, M. Gómez, Vitale, P. F. Gómez, Gongora, J. P., González, J. M., González, N., Goos, I., Góra, D., Gorgi, A., Gottowik, M., Grubb, T. D., Guarino, F., Guedes, G. P., Guido, E., Hahn, S., Hamal, P., Hampel, M. R., Hansen, P., Harari, D., Harvey, V. M., Haungs, A., Hebbeker, T., Heck, D., Hojvat, C., Hörandel, J. R., Horvath, P., Hrabovský, M., Huege, T., Insolia, A., Isar, P. G., Janecek, P., Johnsen, J. A., Jurysek, J., Kääpä, A., Kampert, K. H., Keilhauer, B., Khakurdikar, A., Covilakam, V. V. Kizakke, Klages, H. O., Kleifges, M., Kleinfeller, J., Knapp, F., Kunka, N., Lago, B. L., Langner, N., de Oliveira, M. A. Leigui, Lenok, V., Letessier-Selvon, A., Lhenry-Yvon, I., Presti, D. Lo, Lopes, L., López, R., Lu, L., Luce, Q., Lundquist, J. P., Payeras, A. Machado, Majercakova, M., Mandat, D., Manning, B. C., Manshanden, J., Mantsch, P., Marafico, S., Mariani, F. M., Mariazzi, A. G., Mariş, I. C., Marsella, G., Martello, D., Martinelli, S., Bravo, O. Martínez, Martins, M. A., Mastrodicasa, M., Mathes, H. J., Matthews, J., Matthiae, G., Mayotte, E., Mayotte, S., Mazur, P. O., Medina-Tanco, G., Meinert, J., Melo, D., Menshikov, A., Michal, S., Micheletti, M. I., Miramonti, L., Mollerach, S., Montanet, F., Morejon, L., Morello, C., Müller, A. L., Mulrey, K., Mussa, R., Muzio, M., Namasaka, W. M., Nasr-Esfahani, A., Nellen, L., Nicora, G., Niculescu-Oglinzanu, M., Niechciol, M., Nitz, D., Norwood, I., Nosek, D., Novotny, V., Nožka, L., Nucita, A, Núñez, L. A., Oliveira, C., Palatka, M., Pallotta, J., Parente, G., Parra, A., Pawlowsky, J., Pech, M., Pękala, J., Pelayo, R., Martins, E. E. Pereira, Armand, J. Perez, Bertolli, C. Pérez, Perrone, L., Petrera, S., Petrucci, C., Pierog, T., Pimenta, M., Platino, M., Pont, B., Pothast, M., Shavar, M. Pourmohammad, Privitera, P., Prouza, M., Puyleart, A., Querchfeld, S., Rautenberg, J., Ravignani, D., Reininghaus, M., Ridky, J., Riehn, F., Risse, M., Rizi, V., de Carvalho, W. Rodrigues, Rojo, J. Rodriguez, Roncoroni, M. J., Rossoni, S., Roth, M., Roulet, E., Rovero, A. C., Ruehl, P., Saftoiu, A., Saharan, M., Salamida, F., Salazar, H., Salina, G., Gomez, J. D. Sanabria, Sánchez, F., Santos, E. M., Santos, E., Sarazin, F., Sarmento, R., Sato, R., Savina, P., Schäfer, C. M., Scherini, V., Schieler, H., Schimassek, M., Schimp, M., Schlüter, F., Schmidt, D., Scholten, O., Schoorlemmer, H., Schovánek, P., Schröder, F. G., Schulte, J., Schulz, T., Sciutto, S. J., Scornavacche, M., Segreto, A., Sehgal, S., Shivashankara, S. U., Sigl, G., Silli, G., Sima, O., Smau, R., Šmída, R., Sommers, P., Soriano, J. F., Squartini, R., Stadelmaier, M., Stanca, D., Stanič, S., Stasielak, J., Stassi, P., Straub, M., Streich, A., Suárez-Durán, M., Suomijärvi, T., Supanitsky, A. D., Szadkowski, Z., Tapia, A., Taricco, C., Timmermans, C., Tkachenko, O., Tobiska, P., Peixoto, C. J. Todero, Tomé, B., Torrès, Z., Travaini, A., Travnicek, P., Trimarelli, C., Tueros, M., Ulrich, R., Unger, M., Vaclavek, L., Vacula, M., Galicia, J. F. Valdés, Valore, L., Varela, E., Vásquez-Ramírez, A., Veberič, D., Ventura, C., Quispe, I. D. Vergara, Verzi, V., Vicha, J., Vink, J., Vorobiov, S., Watanabe, C., Watson, A. A., Weindl, A., Wiencke, L., Wilczyński, H., Wittkowski, D., Wundheiler, B., Yushkov, A., Zapparrata, O., Zas, E., Zavrtanik, D., and Zavrtanik, M.
Subjects: Astrophysics - High Energy Astrophysical Phenomena
Abstract: In this work we present the interpretation of the energy spectrum and mass composition data as measured by the Pierre Auger Collaboration above $6 \times 10^{17}$ eV. We use an astrophysical model with two extragalactic source populations to model the hardening of the cosmic-ray flux at around $5\times 10^{18}$ eV (the so-called "ankle" feature) as a transition between these two components. We find our data to be well reproduced if sources above the ankle emit a mixed composition with a hard spectrum and a low rigidity cutoff. The component below the ankle is required to have a very soft spectrum and a mix of protons and intermediate-mass nuclei. The origin of this intermediate-mass component is not well constrained and it could originate from either Galactic or extragalactic sources. To the aim of evaluating our capability to constrain astrophysical models, we discuss the impact on the fit results of the main experimental systematic uncertainties and of the assumptions about quantities affecting the air shower development as well as the propagation and redshift distribution of injected ultra-high-energy cosmic rays (UHECRs)., Comment: Submitted to JCAP
Published: 2022
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105. Global emergent responses of stream microbial metabolism to glacier shrinkage

Author: Kohler, Tyler J., Bourquin, Massimo, Peter, Hannes, Yvon-Durocher, Gabriel, Sinsabaugh, Robert L., Deluigi, Nicola, Styllas, Michael, and Battin, Tom J.
Published: 2024
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106. Trophic Transfer of Cd, Cu, Pb, Zn, P and Se in Dutch Storage Water Reservoirs

Author: Verstijnen, Yvon J. M., Lucassen, Esther C. H. E. T., Wagenvoort, Arco J., Ketelaars, Henk A. M., van der Velde, Gerard, and Smolders, Alfons J. P.
Published: 2024
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107. Small molecules help misplaced proteins hitchhike around cells

Author: Yvon, Robert and Woo, Christina M.
Published: 2024
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108. The response of sea turtles to vocalizations opens new perspectives to reduce their bycatch

Author: Damien Chevallier, Léo Maucourt, Isabelle Charrier, Pierre Lelong, Yves Le Gall, Eric Menut, Bryan Wallace, Cyrielle Delvenne, Orsolya Vincze, Lorène Jeantet, Marc Girondot, Jordan Martin, Ouvéa Bourgeois, Muriel Lepori, Pascal Fournier, Christine Fournier-Chambrillon, Sidney Régis, Nicolas Lecerf, Fabien Lefebvre, Nathalie Aubert, Mosiah Arthus, Matthieu Pujol, Michel Anthony Nalovic, Moulanier Nicolas, Marie-Clémence Burg, Pascale Chevallier, Tao Chevallier, Antony Landreau, Stéphane Meslier, Eugène Larcher, and Yvon Le Maho
Subjects: Medicine, Science
Abstract: Abstract Incidental capture of non-target species poses a pervasive threat to many marine species, with sometimes devastating consequences for both fisheries and conservation efforts. Because of the well-known importance of vocalizations in cetaceans, acoustic deterrents have been extensively used for these species. In contrast, acoustic communication for sea turtles has been considered negligible, and this question has been largely unexplored. Addressing this challenge therefore requires a comprehensive understanding of sea turtles’ responses to sensory signals. In this study, we scrutinized the avenue of auditory cues, specifically the natural sounds produced by green turtles (Chelonia mydas) in Martinique, as a potential tool to reduce bycatch. We recorded 10 sounds produced by green turtles and identified those that appear to correspond to alerts, flight or social contact between individuals. Subsequently, these turtle sounds—as well synthetic and natural (earthquake) sounds—were presented to turtles in known foraging areas to assess the behavioral response of green turtles to these sounds. Our data highlighted that the playback of sounds produced by sea turtles was associated with alert or increased the vigilance of individuals. This therefore suggests novel opportunities for using sea turtle sounds to deter them from fishing gear or other potentially harmful areas, and highlights the potential of our research to improve sea turtles populations’ conservation.
Published: 2024
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109. Atmospheric muons measured with the KM3NeT detectors in comparison with updated numeric predictions

Author: KM3NeT Collaboration, S. Aiello, A. Albert, M. Alshamsi, S. Alves Garre, A. Ambrosone, F. Ameli, M. Andre, E. Androutsou, M. Anguita, L. Aphecetche, M. Ardid, S. Ardid, A. Arsenic, H. Atmani, J. Aublin, F. Badaracco, L. Bailly-Salins, Z. Bardačová, B. Baret, A. Bariego-Quintana, S. Basegmez du Pree, Y. Becherini, M. Bendahman, F. Benfenati, M. Benhassi, D. M. Benoit, E. Berbee, V. Bertin, S. Biagi, M. Boettcher, D. Bonanno, J. Boumaaza, M. Bouta, M. Bouwhuis, C. Bozza, R. M. Bozza, H. Brânzaş, F. Bretaudeau, M. Breuhaus, R. Bruijn, J. Brunner, R. Bruno, E. Buis, R. Buompane, J. Busto, B. Caiffi, D. Calvo, S. Campion, A. Capone, F. Carenini, V. Carretero, T. Cartraud, P. Castaldi, V. Cecchini, S. Celli, L. Cerisy, M. Chabab, M. Chadolias, A. Chen, S. Cherubini, T. Chiarusi, M. Circella, R. Cocimano, J. A. B. Coelho, A. Coleiro, A. Condorelli, R. Coniglione, P. Coyle, A. Creusot, G. Cuttone, R. Dallier, Y. Darras, A. De Benedittis, B. De Martino, V. Decoene, R. Del Burgo, I. Del Rosso, L. S. Di Mauro, I. Di Palma, A. F. Díaz, C. Diaz, D. Diego-Tortosa, C. Distefano, A. Domi, C. Donzaud, D. Dornic, M. Dörr, E. Drakopoulou, D. Drouhin, J.-G. Ducoin, R. Dvornický, T. Eberl, E. Eckerová, A. Eddymaoui, T. van Eeden, M. Eff, D. van Eijk, I. El Bojaddaini, S. El Hedri, A. Enzenhöfer, G. Ferrara, M. D. Filipović, F. Filippini, D. Franciotti, L. A. Fusco, S. Gagliardini, T. Gal, J. García Méndez, A. Garcia Soto, C. Gatius Oliver, N. Geißelbrecht, H. Ghaddari, L. Gialanella, B. K. Gibson, E. Giorgio, I. Goos, P. Goswami, S. R. Gozzini, R. Gracia, K. Graf, C. Guidi, B. Guillon, M. Gutiérrez, C. Haack, H. van Haren, A. Heijboer, A. Hekalo, L. Hennig, J. J. Hernández-Rey, W. Idrissi Ibnsalih, G. Illuminati, D. Joly, M. de Jong, P. de Jong, B. J. Jung, P. Kalaczyński, O. Kalekin, U. F. Katz, A. Khatun, G. Kistauri, C. Kopper, A. Kouchner, V. Kueviakoe, V. Kulikovskiy, R. Kvatadze, M. Labalme, R. Lahmann, G. Larosa, C. Lastoria, A. Lazo, S. Le Stum, G. Lehaut, E. Leonora, N. Lessing, G. Levi, F. Longhitano, F. Magnani, J. Majumdar, L. Malerba, F. Mamedov, J. Mańczak, A. Manfreda, M. Marconi, A. Margiotta, A. Marinelli, C. Markou, L. Martin, F. Marzaioli, M. Mastrodicasa, S. Mastroianni, S. Miccichè, G. Miele, P. Migliozzi, E. Migneco, M. L. Mitsou, C. M. Mollo, L. Morales-Gallegos, G. Moretti, A. Moussa, I. Mozun Mateo, R. Muller, M. R. Musone, M. Musumeci, S. Navas, A. Nayerhoda, C. A. Nicolau, B. Nkosi, B. Ó. Fearraigh, V. Oliviero, A. Orlando, E. Oukacha, D. Paesani, J. Palacios González, G. Papalashvili, V. Parisi, E. J. Pastor Gomez, A. M. Păun, G. E. Păvălaş, I. Pelegris, S. Peña Martínez, M. Perrin-Terrin, J. Perronnel, V. Pestel, R. Pestes, P. Piattelli, C. Poirè, V. Popa, T. Pradier, J. Prado, S. Pulvirenti, C. A. Quiroz-Rangel, U. Rahaman, N. Randazzo, S. Razzaque, I. C. Rea, D. Real, G. Riccobene, J. Robinson, A. Romanov, A. Šaina, F. Salesa Greus, D. F. E. Samtleben, A. Sánchez Losa, S. Sanfilippo, M. Sanguineti, C. Santonastaso, D. Santonocito, P. Sapienza, J. Schnabel, J. Schumann, H. M. Schutte, J. Seneca, N. Sennan, B. Setter, I. Sgura, R. Shanidze, A. Sharma, Y. Shitov, F. Šimkovic, A. Simonelli, A. Sinopoulou, M. V. Smirnov, B. Spisso, M. Spurio, D. Stavropoulos, I. Štekl, M. Taiuti, Y. Tayalati, H. Thiersen, I. Tosta e Melo, E. Tragia, B. Trocmé, V. Tsourapis, A. Tudorache, E. Tzamariudaki, A. Vacheret, A. Valer Melchor, V. Valsecchi, V. Van Elewyck, G. Vannoye, G. Vasileiadis, F. Vazquez de Sola, A. Veutro, S. Viola, D. Vivolo, J. Wilms, E. de Wolf, H. Yepes-Ramirez, I. Yvon, G. Zarpapis, S. Zavatarelli, A. Zegarelli, D. Zito, J. D. Zornoza, J. Zúñiga, and N. Zywucka
Subjects: Astrophysics, QB460-466, Nuclear and particle physics. Atomic energy. Radioactivity, QC770-798
Abstract: Abstract The measurement of the flux of muons produced in cosmic ray air showers is essential for the study of primary cosmic rays. Such measurements are important in extensive air shower detectors to assess the energy spectrum and the chemical composition of the cosmic ray flux, complementary to the information provided by fluorescence detectors. Detailed simulations of the cosmic ray air showers are carried out, using codes such as CORSIKA, to estimate the muon flux at sea level. These simulations are based on the choice of hadronic interaction models, for which improvements have been implemented in the post-LHC era. In this work, a deficit in simulations that use state-of-the-art QCD models with respect to the measurement deep underwater with the KM3NeT neutrino detectors is reported. The KM3NeT/ARCA and KM3NeT/ORCA neutrino telescopes are sensitive to TeV muons originating mostly from primary cosmic rays with energies around 10 TeV. The predictions of state-of-the-art QCD models show that the deficit with respect to the data is constant in zenith angle; no dependency on the water overburden is observed. The observed deficit at a depth of several kilometres is compatible with the deficit seen in the comparison of the simulations and measurements at sea level.
Published: 2024
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110. Driving gut microbiota enterotypes through host genetics

Author: Catherine Larzul, Jordi Estellé, Marion Borey, Fany Blanc, Gaëtan Lemonnier, Yvon Billon, Mamadou Gabou Thiam, Benoît Quinquis, Nathalie Galleron, Deborah Jardet, Jérôme Lecardonnel, Florian Plaza Oñate, and Claire Rogel-Gaillard
Subjects: Gut microbiota, Genetics, Genetic selection, Enterotype, Holobiont, Metagenomics, Microbial ecology, QR100-130
Abstract: Abstract Background Population stratification based on interindividual variability in gut microbiota composition has revealed the existence of several ecotypes named enterotypes in humans and various animal species. Enterotypes are often associated with environmental factors including diet, but knowledge of the role of host genetics remains scarce. Moreover, enterotypes harbor functionalities likely associated with varying abilities and susceptibilities of their host. Previously, we showed that under controlled conditions, 60-day-old pig populations consistently split into two enterotypes with either Prevotella and Mitsuokella (PM enterotype) or Ruminococcus and Treponema (RT enterotype) as keystone taxa. Here, our aim was to rely on pig as a model to study the influence of host genetics to assemble enterotypes, and to provide clues on enterotype functional differences and their links with growth traits. Results We established two pig lines contrasted for abundances of the genera pairs specifying each enterotype at 60 days of age and assessed them for fecal microbiota composition and growth throughout three consecutive generations. Response to selection across three generations revealed, per line, an increase in the prevalence of the selected enterotype and in the average relative abundances of directly and indirectly selected bacterial genera. The PM enterotype was found less diverse than the RT enterotype but more efficient for piglet growth during the post-weaning period. Shotgun metagenomics revealed differentially abundant bacterial species between the two enterotypes. By using the KEGG Orthology database, we show that functions related to starch degradation and polysaccharide metabolism are enriched in the PM enterotype, whereas functions related to general nucleoside transport and peptide/nickel transport are enriched in the RT enterotype. Our results also suggest that the PM and RT enterotypes might differ in the metabolism of valine, leucin, and isoleucine, favoring their biosynthesis and degradation, respectively. Conclusion We experimentally demonstrated that enterotypes are functional ecosystems that can be selected as a whole by exerting pressure on the host genetics. We also highlight that holobionts should be considered as units of selection in breeding programs. These results pave the way for a holistic use of host genetics, microbiota diversity, and enterotype functionalities to understand holobiont shaping and adaptation. Video Abstract
Published: 2024
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111. Oculoplastic Conditions in Covid-19 Patients: Case Series and Literature Review

Author: Camille Yvon, Bhupendra Patel, John Ng, Marcus T Altman, and Raman Malhotra
Subjects: case studies, coronavirus, eyelid disease, inflammation, orbital disease, Ophthalmology, RE1-994
Abstract: Abstract Purpose: To investigate oculoplastic conditions in patients diagnosed with coronavirus disease 2019 (COVID-19) seen at ophthalmology departments of three tertiary referral centers in the United Kingdom and the United States, and review of the literature. Methods: Retrospective multicenter case series studied over 18 months. Results: A total of four patients developed eyelid, orbital, or lacrimal gland pathology within four weeks of testing positive for COVID-19. All were male, and the mean age at presentation was 49 (range, 31–58 years). Suspected diagnoses included anterior idiopathic orbital inflammation, facial angioedema, dacryoadenitis, and anophthalmic socket inflammation. Three patients recovered fully and one patient recovered partially (mean 2.7 weeks) from ocular manifestations with steroids hastening recovery. Conclusion: Adnexal manifestations of COVID-19 include self-limiting orbital inflammation and eyelid lymphedema.
Published: 2024
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112. Protective Efficacy of Lyophilized Vesicular Stomatitis Virus–Based Vaccines in Animal Model

Author: Abd’jeleel Salawudeen, Geoff Soule, Nikesh Tailor, Levi Klassen, Jonathan Audet, Angela Sloan, Yvon Deschambault, and David Safronetz
Subjects: vesicular stomatitis virus, vaccines, Ebola virus, Lassa virus, glycoproteins, lyophilized, Medicine, Infectious and parasitic diseases, RC109-216
Abstract: We evaluated the in vitro effects of lyophilization for 2 vesicular stomatitis virus–based vaccines by using 3 stabilizing formulations and demonstrated protective immunity of lyophilized/reconstituted vaccine in guinea pigs. Lyophilization increased stability of the vaccines, but specific vesicular stomatitis virus–based vaccines will each require extensive analysis to optimize stabilizing formulations.
Published: 2024
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113. Neuroinflammation is associated with Alzheimer’s disease co-pathology in dementia with Lewy bodies

Author: Janna van Wetering, Hanne Geut, John J. Bol, Yvon Galis, Evelien Timmermans, Jos W.R. Twisk, Dagmar H. Hepp, Martino L. Morella, Lasse Pihlstrom, Afina W. Lemstra, Annemieke J.M. Rozemuller, Laura E. Jonkman, and Wilma D.J. van de Berg
Subjects: Lewy body disease, Dementia with Lewy bodies, Alzheimer’s disease, Co-pathology, Neuroinflammation, Alpha-synuclein, Neurology. Diseases of the nervous system, RC346-429
Abstract: Abstract Background Neuroinflammation and Alzheimer’s disease (AD) co-pathology may contribute to disease progression and severity in dementia with Lewy bodies (DLB). This study aims to clarify whether a different pattern of neuroinflammation, such as alteration in microglial and astroglial morphology and distribution, is present in DLB cases with and without AD co-pathology. Methods The morphology and load (% area of immunopositivity) of total (Iba1) and reactive microglia (CD68 and HLA-DR), reactive astrocytes (GFAP) and proteinopathies of alpha-synuclein (KM51/pser129), amyloid-beta (6 F/3D) and p-tau (AT8) were assessed in a cohort of mixed DLB + AD (n = 35), pure DLB (n = 15), pure AD (n = 16) and control (n = 11) donors in limbic and neocortical brain regions using immunostaining, quantitative image analysis and confocal microscopy. Regional and group differences were estimated using a linear mixed model analysis. Results Morphologically, reactive and amoeboid microglia were common in mixed DLB + AD, while homeostatic microglia with a small soma and thin processes were observed in pure DLB cases. A higher density of swollen astrocytes was observed in pure AD cases, but not in mixed DLB + AD or pure DLB cases. Mixed DLB + AD had higher CD68-loads in the amygdala and parahippocampal gyrus than pure DLB cases, but did not differ in astrocytic loads. Pure AD showed higher Iba1-loads in the CA1 and CA2, higher CD68-loads in the CA2 and subiculum, and a higher astrocytic load in the CA1-4 and subiculum than mixed DLB + AD cases. In mixed DLB + AD cases, microglial load associated strongly with amyloid-beta (Iba1, CD68 and HLA-DR), and p-tau (CD68 and HLA-DR), and minimally with alpha-synuclein load (CD68). In addition, the highest microglial activity was found in the amygdala and CA2, and astroglial load in the CA4. Confocal microscopy demonstrated co-localization of large amoeboid microglia with neuritic and classic-cored plaques of amyloid-beta and p-tau in mixed DLB + AD cases. Conclusions In conclusion, microglial activation in DLB was largely associated with AD co-pathology, while astrocytic response in DLB was not. In addition, microglial activity was high in limbic regions, with prevalent AD pathology. Our study provides novel insights into the molecular neuropathology of DLB, highlighting the importance of microglial activation in mixed DLB + AD.
Published: 2024
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114. Genomic insights of Salmonella isolated from dry fermented sausage production chains in Spain and France

Author: Núria Ferrer-Bustins, Claire Yvon, Belén Martín, Vincent Leclerc, Jean-Charles Leblanc, Laura Corominas, Sara Sabaté, Eva Tolosa-Muñoz, Carme Chacón-Villanueva, Sara Bover-Cid, Sabrina Cadel-Six, and Anna Jofré
Subjects: cgMLST, SNPs, Accessory genome analyses, Dry fermented sausages (DFS), Salmonella, Whole genome sequencing (WGS), Medicine, Science
Abstract: Abstract The presence of Salmonella in dry fermented sausages is source of recalls and outbreaks. The genomic diversity of 173 Salmonella isolates from the dry fermented sausage production chains (pig carcasses, pork, and sausages) from France and Spain were investigated through their core phylogenomic relationships and accessory genome profiles. Ten different serovars and thirteen sequence type profiles were identified. The most frequent serovar from sausages was the monophasic variant of S. Typhimurium (1,4,[5],12:i:-, 72%) while S. Derby was in pig carcasses (51%). Phylogenomic clusters found in S. 1,4,[5],12:i:-, S. Derby, S. Rissen and S. Typhimurium serovars identified closely related isolates, with less than 10 alleles and 20 SNPs of difference, displaying Salmonella persistence along the pork production chain. Most of the S. 1,4,[5],12:i:- contained the Salmonella genomic island-4 (SGI-4), Tn21 and IncFIB plasmid. More than half of S. Derby strains contained the SGI-1 and Tn7. S. 1,4,[5],12:i:- genomes carried the most multidrug resistance genes (91% of the strains), whereas extended-spectrum β-lactamase genes were found in Typhimurium and Derby serovars. Salmonella monitoring and characterization in the pork production chains, specially S. 1,4,[5],12:i:- serovar, is of special importance due to its multidrug resistance capacity and persistence in dry fermented sausages.
Published: 2024
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115. Bilingual Synchronization: Restoring Translational Relationships with Editing Operations

Author: Xu, Jitao, Crego, Josep, and Yvon, François
Subjects: Computer Science - Computation and Language
Abstract: Machine Translation (MT) is usually viewed as a one-shot process that generates the target language equivalent of some source text from scratch. We consider here a more general setting which assumes an initial target sequence, that must be transformed into a valid translation of the source, thereby restoring parallelism between source and target. For this bilingual synchronization task, we consider several architectures (both autoregressive and non-autoregressive) and training regimes, and experiment with multiple practical settings such as simulated interactive MT, translating with Translation Memory (TM) and TM cleaning. Our results suggest that one single generic edit-based system, once fine-tuned, can compare with, or even outperform, dedicated systems specifically trained for these tasks., Comment: EMNLP 2022 main conference
Published: 2022

116. Searches for Ultra-High-Energy Photons at the Pierre Auger Observatory

Author: The Pierre Auger Collaboration, Abreu, P., Aglietta, M., Allekotte, I., Cheminant, K. Almeida, Almela, A., Alvarez-Muñiz, J., Yebra, J. Ammerman, Anastasi, G. A., Anchordoqui, L., Andrada, B., Andringa, S., Aramo, C., Ferreira, P. R. Araújo, Arnone, E., Velázquez, J. C. Arteaga, Asorey, H., Assis, P., Avila, G., Avocone, E., Badescu, A. M., Bakalova, A., Balaceanu, A., Barbato, F., Bellido, J. A., Berat, C., Bertaina, M. E., Bhatta, G., Biermann, P. L., Binet, V., Bismark, K., Bister, T., Biteau, J., Blazek, J., Bleve, C., Blümer, J., Boháčová, M., Boncioli, D., Bonifazi, C., Arbeletche, L. Bonneau, Borodai, N., Brack, J., Bretz, T., Orchera, P. G. Brichetto, Briechle, F. L., Buchholz, P., Bueno, A., Buitink, S., Buscemi, M., Büsken, M., Bwembya, A., Caballero-Mora, K. S., Caccianiga, L., Caracas, I., Caruso, R., Castellina, A., Catalani, F., Cataldi, G., Cazon, L., Cerda, M., Chinellato, J. A., Chudoba, J., Chytka, L., Clay, R. W., Cerutti, A. C. Cobos, Colalillo, R., Coleman, A., Coluccia, M. R., Conceição, R., Condorelli, A., Consolati, G., Contreras, F., Convenga, F., Santos, D. Correia dos, Covault, C. E., Cristinziani, M., Dasso, S., Daumiller, K., Dawson, B. R., de Almeida, R. M., de Jesús, J., de Jong, S. J., Neto, J. R. T. de Mello, De Mitri, I., de Oliveira, J., Franco, D. de Oliveira, de Palma, F., de Souza, V., De Vito, E., Del Popolo, A., Deligny, O., Deval, L., di Matteo, A., Dobre, M., Dobrigkeit, C., D'Olivo, J. C., Mendes, L. M. Domingues, Anjos, R. C. dos, Ebr, J., Eman, M., Engel, R., Epicoco, I., Erdmann, M., Etchegoyen, A., Falcke, H., Farmer, J., Farrar, G., Fauth, A. C., Fazzini, N., Feldbusch, F., Fenu, F., Fick, B., Figueira, J. M., Filipčič, A., Fitoussi, T., Fodran, T., Fujii, T., Fuster, A., Galea, C., Galelli, C., García, B., Gemmeke, H., Gesualdi, F., Gherghel-Lascu, A., Ghia, P. L., Giaccari, U., Giammarchi, M., Glombitza, J., Gobbi, F., Gollan, F., Golup, G., Berisso, M. Gómez, Vitale, P. F. Gómez, Gongora, J. P., González, J. M., González, N., Goos, I., Góra, D., Gorgi, A., Gottowik, M., Grubb, T. D., Guarino, F., Guedes, G. P., Guido, E., Hahn, S., Hamal, P., Hampel, M. R., Hansen, P., Harari, D., Harvey, V. M., Haungs, A., Hebbeker, T., Heck, D., Hojvat, C., Hörandel, J. R., Horvath, P., Hrabovský, M., Huege, T., Insolia, A., Isar, P. G., Janecek, P., Johnsen, J. A., Jurysek, J., Kääpä, A., Kampert, K. H., Keilhauer, B., Khakurdikar, A., Covilakam, V. V. Kizakke, Klages, H. O., Kleifges, M., Kleinfeller, J., Knapp, F., Kunka, N., Lago, B. L., Langner, N., de Oliveira, M. A. Leigui, Lenok, V., Letessier-Selvon, A., Lhenry-Yvon, I., Presti, D. Lo, Lopes, L., López, R., Lu, L., Luce, Q., Lundquist, J. P., Payeras, A. Machado, Mancarella, G., Mandat, D., Manning, B. C., Manshanden, J., Mantsch, P., Marafico, S., Mariani, F. M., Mariazzi, A. G., Mariş, I. C., Marsella, G., Martello, D., Martinelli, S., Bravo, O. Martínez, Martins, M. A., Mastrodicasa, M., Mathes, H. J., Matthews, J., Matthiae, G., Mayotte, E., Mayotte, S., Mazur, P. O., Medina-Tanco, G., Melo, D., Menshikov, A., Michal, S., Micheletti, M. I., Miramonti, L., Mollerach, S., Montanet, F., Morejon, L., Morello, C., Müller, A. L., Mulrey, K., Mussa, R., Muzio, M., Namasaka, W. M., Nasr-Esfahani, A., Nellen, L., Nicora, G., Niculescu-Oglinzanu, M., Niechciol, M., Nitz, D., Norwood, I., Nosek, D., Novotny, V., Nožka, L., Nucita, A, Núñez, L. A., Oliveira, C., Palatka, M., Pallotta, J., Parente, G., Parra, A., Pawlowsky, J., Pech, M., Pękala, J., Pelayo, R., Martins, E. E. Pereira, Armand, J. Perez, Bertolli, C. Pérez, Perrone, L., Petrera, S., Petrucci, C., Pierog, T., Pimenta, M., Platino, M., Pont, B., Pothast, M., Shavar, M. Pourmohammad, Privitera, P., Prouza, M., Puyleart, A., Querchfeld, S., Rautenberg, J., Ravignani, D., Reininghaus, M., Ridky, J., Riehn, F., Risse, M., Rizi, V., de Carvalho, W. Rodrigues, Rojo, J. Rodriguez, Roncoroni, M. J., Rossoni, S., Roth, M., Roulet, E., Rovero, A. C., Ruehl, P., Saftoiu, A., Saharan, M., Salamida, F., Salazar, H., Salina, G., Gomez, J. D. Sanabria, Sánchez, F., Santos, E. M., Santos, E., Sarazin, F., Sarmento, R., Sato, R., Savina, P., Schäfer, C. M., Scherini, V., Schieler, H., Schimassek, M., Schimp, M., Schlüter, F., Schmidt, D., Scholten, O., Schoorlemmer, H., Schovánek, P., Schröder, F. G., Schulte, J., Schulz, T., Sciutto, S. J., Scornavacche, M., Segreto, A., Sehgal, S., Shivashankara, S. U., Sigl, G., Silli, G., Sima, O., Smau, R., Šmída, R., Sommers, P., Soriano, J. F., Squartini, R., Stadelmaier, M., Stanca, D., Stanič, S., Stasielak, J., Stassi, P., Straub, M., Streich, A., Suárez-Durán, M., Sudholz, T., Suomijärvi, T., Supanitsky, A. D., Szadkowski, Z., Tapia, A., Taricco, C., Timmermans, C., Tkachenko, O., Tobiska, P., Peixoto, C. J. Todero, Tomé, B., Torrès, Z., Travaini, A., Travnicek, P., Trimarelli, C., Tueros, M., Ulrich, R., Unger, M., Vaclavek, L., Vacula, M., Galicia, J. F. Valdés, Valore, L., Varela, E., Vásquez-Ramírez, A., Veberič, D., Ventura, C., Quispe, I. D. Vergara, Verzi, V., Vicha, J., Vink, J., Vorobiov, S., Watanabe, C., Watson, A. A., Weindl, A., Wiencke, L., Wilczyński, H., Wittkowski, D., Wundheiler, B., Yushkov, A., Zapparrata, O., Zas, E., Zavrtanik, D., Zavrtanik, M., and Zehrer, L.
Subjects: Astrophysics - High Energy Astrophysical Phenomena
Abstract: The Pierre Auger Observatory, being the largest air-shower experiment in the world, offers an unprecedented exposure to neutral particles at the highest energies. Since the start of data taking more than 18 years ago, various searches for ultra-high-energy (UHE, $E\gtrsim10^{17}\,\text{eV}$) photons have been performed: either for a diffuse flux of UHE photons, for point sources of UHE photons or for UHE photons associated with transient events like gravitational wave events. In the present paper, we summarize these searches and review the current results obtained using the wealth of data collected by the Pierre Auger Observatory., Comment: Review article accepted for publication in Universe (special issue on ultra-high energy photons)
Published: 2022
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117. Kim-forking for hyperimaginaries in NSOP1 theories

Author: Bossut, Yvon
Subjects: Mathematics - Logic
Abstract: We adapt the properties of Kim-independence in NSOP1 theories with existence proven in [5],[4] and [2] by Ramsey, Kaplan, Chernikov, Dobrowolski and Kim to hyperimaginaries by adding the assumption of existence for hyperimaginaries. We show that Kim-independence over hyperimaginaries satisfies a version of Kim's lemma, symmetry, the independence theorem, transitivity and witnessing. As applications we adapt Kim's results around colinearity and weak canonical bases from [8] to hyperimaginaries and give some new results about Lascar strong types and Kim-forking using boundedly closed hyperimaginaries., Comment: This is my master's thesis which i did under the supervisement of Frank O. Wagner. arXiv admin note: text overlap with arXiv:1909.08368 by other authors
Published: 2022

118. Graph-Based Multilingual Label Propagation for Low-Resource Part-of-Speech Tagging

Author: Imani, Ayyoob, Severini, Silvia, Sabet, Masoud Jalili, Yvon, François, and Schütze, Hinrich
Subjects: Computer Science - Computation and Language
Abstract: Part-of-Speech (POS) tagging is an important component of the NLP pipeline, but many low-resource languages lack labeled data for training. An established method for training a POS tagger in such a scenario is to create a labeled training set by transferring from high-resource languages. In this paper, we propose a novel method for transferring labels from multiple high-resource source to low-resource target languages. We formalize POS tag projection as graph-based label propagation. Given translations of a sentence in multiple languages, we create a graph with words as nodes and alignment links as edges by aligning words for all language pairs. We then propagate node labels from source to target using a Graph Neural Network augmented with transformer layers. We show that our propagation creates training sets that allow us to train POS taggers for a diverse set of languages. When combined with enhanced contextualized embeddings, our method achieves a new state-of-the-art for unsupervised POS tagging of low-resource languages., Comment: EMNLP 2022
Published: 2022

119. Integrating Translation Memories into Non-Autoregressive Machine Translation

Author: Xu, Jitao, Crego, Josep, and Yvon, François
Subjects: Computer Science - Computation and Language
Abstract: Non-autoregressive machine translation (NAT) has recently made great progress. However, most works to date have focused on standard translation tasks, even though some edit-based NAT models, such as the Levenshtein Transformer (LevT), seem well suited to translate with a Translation Memory (TM). This is the scenario considered here. We first analyze the vanilla LevT model and explain why it does not do well in this setting. We then propose a new variant, TM-LevT, and show how to effectively train this model. By modifying the data presentation and introducing an extra deletion operation, we obtain performance that are on par with an autoregressive approach, while reducing the decoding load. We also show that incorporating TMs during training dispenses to use knowledge distillation, a well-known trick used to mitigate the multimodality issue., Comment: Accepted at EACL 2023 main conference
Published: 2022

120. Polynomials realizing images of Galois representations of an elliptic curve

Author: Yvon, Zoé
Subjects: Mathematics - Number Theory, Primary 12F12, 11G05, Secondary 11R32, 11F80, 11Y99
Abstract: The aim of the inverse Galois problem is to find extensions of a given field whose Galois group is isomorphic to a given group. In this article, we are interested in subgroups of GL(2,Z/nZ) where n is an integer. We know that, in general, we can realize these groups as the Galois group of a given number field, using the torsion points on an elliptic curve. Specifically, a theorem of Reverter and Vila (2000) gives, for each prime n, a polynomial, depending on an elliptic curve, whose Galois group is GL(2,Z/nZ). In this article, we generalize this theorem in several directions, in particular for n non necessarily prime. We also determine a minimum for the valuations of the coefficients of the polynomials arising in our construction, depending only on n., Comment: Comments are welcome !
Published: 2022
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121. Detailed simulation for the ClearMind prototype detection module and event reconstruction using artificial intelligence

Author: Sung, Chi-Hsun, Cappellugola, Laurie, Follin, Megane, Curtoni, Sébastien, Dupont, Mathieu, Morel, Christian, Galindo-Tellez, Aline, Chyzh, Roman, Breton, Dominique, Maalmi, Jihane, Yvon, Dominique, and Sharyy, Viatcheslav
Subjects: Physics - Instrumentation and Detectors
Abstract: The ClearMind project aims to develop the TOF-PET position sensitive detection module optimized for the time resolution, spatial resolution, and detection efficiency. For this, the ClearMind project uses a large (59 $\times$ 59 mm$^2$) monolithic PbWO$_4$ (PWO) scintillating crystal with a bialkali photo-electric layer deposited directly on the crystal. Scintillation and Cherenkov photons result together from the 511 keV gamma-ray interation into the PWO crystal. A micro-channel plate photomultiplier tube (MCP-PMT) encapsulating the PWO crystal amplifies photoelectrons generated at the photocathode, and the corresponding anode signals are collected through the transmission lines read out at both ends and digitized by a SAMPIC module. In this work, we present a realistic Geant4 simulation of the ClearMind prototype detector, including the propagation of the visible photons in the crystal, the modelling of a realistic response of the photocathode and of the PMT, and the propagation of the electrical signals over the transmission lines. The reconstruction of the gamma conversion in the detector volume is performed from the signals registered at both ends of the transmission lines. We compare the reconstruction precision of a statistical algorithm against machine learning algorithms developed using the TMVA package. We expect to reach a spatial resolution down to a few mm$^3$ (FWHM). Finally, we will discuss prospects for the ClearMind detector.
Published: 2022
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122. Search for photons above 10$^{19}$ eV with the surface detector of the Pierre Auger Observatory

Author: The Pierre Auger Collaboration, Abreu, P., Aglietta, M., Allekotte, I., Cheminant, K. Almeida, Almela, A., Alvarez-Muñiz, J., Yebra, J. Ammerman, Anastasi, G. A., Anchordoqui, L., Andrada, B., Andringa, S., Aramo, C., Ferreira, P. R. Araújo, Arnone, E., Velázquez, J. C. Arteaga, Asorey, H., Assis, P., Avila, G., Avocone, E., Badescu, A. M., Bakalova, A., Balaceanu, A., Barbato, F., Bellido, J. A., Berat, C., Bertaina, M. E., Bhatta, G., Biermann, P. L., Binet, V., Bismark, K., Bister, T., Biteau, J., Blazek, J., Bleve, C., Blümer, J., Boháčová, M., Boncioli, D., Bonifazi, C., Arbeletche, L. Bonneau, Borodai, N., Brack, J., Bretz, T., Orchera, P. G. Brichetto, Briechle, F. L., Buchholz, P., Bueno, A., Buitink, S., Buscemi, M., Büsken, M., Bwembya, A., Caballero-Mora, K. S., Caccianiga, L., Caracas, I., Caruso, R., Castellina, A., Catalani, F., Cataldi, G., Cazon, L., Cerda, M., Chinellato, J. A., Chudoba, J., Chytka, L., Clay, R. W., Cerutti, A. C. Cobos, Colalillo, R., Coleman, A., Coluccia, M. R., Conceição, R., Condorelli, A., Consolati, G., Contreras, F., Convenga, F., Santos, D. Correia dos, Covault, C. E., Cristinziani, M., Dasso, S., Daumiller, K., Dawson, B. R., de Almeida, R. M., de Jesús, J., de Jong, S. J., Neto, J. R. T. de Mello, De Mitri, I., de Oliveira, J., Franco, D. de Oliveira, de Palma, F., de Souza, V., De Vito, E., Del Popolo, A., Deligny, O., Deval, L., di Matteo, A., Dobre, M., Dobrigkeit, C., D'Olivo, J. C., Mendes, L. M. Domingues, Anjos, R. C. dos, Ebr, J., Eman, M., Engel, R., Epicoco, I., Erdmann, M., Escobar, C. O., Etchegoyen, A., Falcke, H., Farmer, J., Farrar, G., Fauth, A. C., Fazzini, N., Feldbusch, F., Fenu, F., Fick, B., Figueira, J. M., Filipčič, A., Fitoussi, T., Fodran, T., Fujii, T., Fuster, A., Galea, C., Galelli, C., García, B., Gemmeke, H., Gesualdi, F., Gherghel-Lascu, A., Ghia, P. L., Giaccari, U., Giammarchi, M., Glombitza, J., Gobbi, F., Gollan, F., Golup, G., Berisso, M. Gómez, Vitale, P. F. Gómez, Gongora, J. P., González, J. M., González, N., Goos, I., Góra, D., Gorgi, A., Gottowik, M., Grubb, T. D., Guarino, F., Guedes, G. P., Guido, E., Hahn, S., Hamal, P., Hampel, M. R., Hansen, P., Harari, D., Harvey, V. M., Haungs, A., Hebbeker, T., Heck, D., Hojvat, C., Hörandel, J. R., Horvath, P., Hrabovský, M., Huege, T., Insolia, A., Isar, P. G., Janecek, P., Johnsen, J. A., Jurysek, J., Kääpä, A., Kampert, K. H., Keilhauer, B., Khakurdikar, A., Covilakam, V. V. Kizakke, Klages, H. O., Kleifges, M., Kleinfeller, J., Knapp, F., Krohm, N., Kunka, N., Lago, B. L., Langner, N., de Oliveira, M. A. Leigui, Lenok, V., Letessier-Selvon, A., Lhenry-Yvon, I., Presti, D. Lo, Lopes, L., López, R., Lu, L., Luce, Q., Lundquist, J. P., Payeras, A. Machado, Mancarella, G., Mandat, D., Manning, B. C., Manshanden, J., Mantsch, P., Marafico, S., Mariani, F. M., Mariazzi, A. G., Mariş, I. C., Marsella, G., Martello, D., Martinelli, S., Bravo, O. Martínez, Martins, M. A., Mastrodicasa, M., Mathes, H. J., Matthews, J., Matthiae, G., Mayotte, E., Mayotte, S., Mazur, P. O., Medina-Tanco, G., Melo, D., Menshikov, A., Michal, S., Micheletti, M. I., Miramonti, L., Mollerach, S., Montanet, F., Morejon, L., Morello, C., Müller, A. L., Mulrey, K., Mussa, R., Muzio, M., Namasaka, W. M., Nasr-Esfahani, A., Nellen, L., Nicora, G., Niculescu-Oglinzanu, M., Niechciol, M., Nitz, D., Norwood, I., Nosek, D., Novotny, V., Nožka, L., Nucita, A, Núñez, L. A., Oliveira, C., Palatka, M., Pallotta, J., Papenbreer, P., Parente, G., Parra, A., Pawlowsky, J., Pech, M., Pękala, J., Pelayo, R., Martins, E. E. Pereira, Armand, J. Perez, Bertolli, C. Pérez, Perrone, L., Petrera, S., Petrucci, C., Pierog, T., Pimenta, M., Platino, M., Pont, B., Pothast, M., Shavar, M. Pourmohammad, Privitera, P., Prouza, M., Puyleart, A., Querchfeld, S., Rautenberg, J., Ravignani, D., Reininghaus, M., Ridky, J., Riehn, F., Risse, M., Rizi, V., de Carvalho, W. Rodrigues, Rojo, J. Rodriguez, Roncoroni, M. J., Rossoni, S., Roth, M., Roulet, E., Rovero, A. C., Ruehl, P., Saftoiu, A., Saharan, M., Salamida, F., Salazar, H., Salina, G., Gomez, J. D. Sanabria, Sánchez, F., Santos, E. M., Santos, E., Sarazin, F., Sarmento, R., Sato, R., Savina, P., Schäfer, C. M., Scherini, V., Schieler, H., Schimassek, M., Schimp, M., Schlüter, F., Schmidt, D., Scholten, O., Schoorlemmer, H., Schovánek, P., Schröder, F. G., Schulte, J., Schulz, T., Sciutto, S. J., Scornavacche, M., Segreto, A., Sehgal, S., Shivashankara, S. U., Sigl, G., Silli, G., Sima, O., Smau, R., Šmída, R., Sommers, P., Soriano, J. F., Squartini, R., Stadelmaier, M., Stanca, D., Stanič, S., Stasielak, J., Stassi, P., Straub, M., Streich, A., Suárez-Durán, M., Sudholz, T., Suomijärvi, T., Supanitsky, A. D., Szadkowski, Z., Tapia, A., Taricco, C., Timmermans, C., Tkachenko, O., Tobiska, P., Peixoto, C. J. Todero, Tomé, B., Torrès, Z., Travaini, A., Travnicek, P., Trimarelli, C., Tueros, M., Ulrich, R., Unger, M., Vaclavek, L., Vacula, M., Galicia, J. F. Valdés, Valore, L., Varela, E., Vásquez-Ramírez, A., Veberič, D., Ventura, C., Quispe, I. D. Vergara, Verzi, V., Vicha, J., Vink, J., Vorobiov, S., Watanabe, C., Watson, A. A., Weindl, A., Wiencke, L., Wilczyński, H., Wittkowski, D., Wundheiler, B., Yushkov, A., Zapparrata, O., Zas, E., Zavrtanik, D., Zavrtanik, M., and Zehrer, L.
Subjects: Astrophysics - High Energy Astrophysical Phenomena
Abstract: We use the surface detector of the Pierre Auger Observatory to search for air showers initiated by photons with an energy above $10^{19}$ eV. Photons in the zenith angle range from 30$^\circ$ to 60$^\circ$ can be identified in the overwhelming background of showers initiated by charged cosmic rays through the broader time structure of the signals induced in the water-Cherenkov detectors of the array and the steeper lateral distribution of shower particles reaching ground. Applying the search method to data collected between January 2004 and June 2020, upper limits at 95\% CL are set to an $E^{-2}$ diffuse flux of ultra-high energy photons above $10^{19}$ eV, $2{\times}10^{19}$ eV and $4{\times}10^{19}$ eV amounting to $2.11{\times}10^{-3}$, $3.12{\times}10^{-4}$ and $1.72{\times}10^{-4}$ km$^{-2}$ sr$^{-1}$ yr$^{-1}$, respectively. While the sensitivity of the present search around $2 \times 10^{19}$ eV approaches expectations of cosmogenic photon fluxes in the case of a pure-proton composition, it is one order of magnitude above those from more realistic mixed-composition models. The inferred limits have also implications for the search of super-heavy dark matter that are discussed and illustrated., Comment: 21 pages, 8 figures
Published: 2022

123. Electro-purification studies and first measurement of relative permittivity of TMBi

Author: Peters, S., Gerke, B., Hannen, V., Huhmann, C., Marquardt, N., Schäfers, K., Yvon, D., Sharyy, V., and Weinheimer, C.
Subjects: Physics - Instrumentation and Detectors
Abstract: A new type of detector for positron-emission tomography (PET) has been proposed recently, using a heavy organo-metallic liquid - TriMethyl Bismuth (TMBi) - as target material. TMBi is a transparent liquid with the high Z element Bismuth contributing 82% of its mass. 511keV annihilation photons are converted efficiently into photo-electrons within the detector material producing both Cherenkov light and free charge carriers in the liquid. While the optical component enables a fast timing, a charge readout using a segmented anode can provide an accurate position reconstruction and energy determination. The charge measurement requires a high level of purification, as any electronegative contaminants cause signal degradation. In addition to the purity requirements, the reactive nature of TMBi poses many challenges that need to be met until a fully functioning detector for PET applications can be realized. The paper presents an experimental setup that aims to remove electronegative impurities by electrostatic filtering and to characterise the properties of TMBi, e.g. the relative permittivity, for its application as a detector medium for charge read out.
Published: 2022
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124. Cosmological implications of photon-flux upper limits at ultra-high energies in scenarios of Planckian-interacting massive particles for dark matter

Author: The Pierre Auger Collaboration, Abreu, P., Aglietta, M., Albury, J. M., Allekotte, I., Cheminant, K. Almeida, Almela, A., Alvarez-Muñiz, J., Batista, R. Alves, Yebra, J. Ammerman, Anastasi, G. A., Anchordoqui, L., Andrada, B., Andringa, S., Aramo, C., Ferreira, P. R. Araújo, Arnone, E., Velázquez, J. C. Arteaga, Asorey, H., Assis, P., Avila, G., Avocone, E., Badescu, A. M., Bakalova, A., Balaceanu, A., Barbato, F., Bellido, J. A., Berat, C., Bertaina, M. E., Bhatta, G., Biermann, P. L., Binet, V., Bismark, K., Bister, T., Biteau, J., Blazek, J., Bleve, C., Blümer, J., Boháčová, M., Boncioli, D., Bonifazi, C., Arbeletche, L. Bonneau, Borodai, N., Botti, A. M., Brack, J., Bretz, T., Orchera, P. G. Brichetto, Briechle, F. L., Buchholz, P., Bueno, A., Buitink, S., Buscemi, M., Büsken, M., Caballero-Mora, K. S., Caccianiga, L., Canfora, F., Caracas, I., Caruso, R., Castellina, A., Catalani, F., Cataldi, G., Cazon, L., Cerda, M., Chinellato, J. A., Chudoba, J., Chytka, L., Clay, R. W., Cerutti, A. C. Cobos, Colalillo, R., Coleman, A., Coluccia, M. R., Conceição, R., Condorelli, A., Consolati, G., Contreras, F., Convenga, F., Santos, D. Correia dos, Covault, C. E., Dasso, S., Daumiller, K., Dawson, B. R., Day, J. A., de Almeida, R. M., de Jesús, J., de Jong, S. J., Neto, J. R. T. de Mello, De Mitri, I., de Oliveira, J., Franco, D. de Oliveira, de Palma, F., de Souza, V., De Vito, E., Del Popolo, A., del Río, M., Deligny, O., Deval, L., di Matteo, A., Dobre, M., Dobrigkeit, C., D'Olivo, J. C., Mendes, L. M. Domingues, Anjos, R. C. dos, Dova, M. T., Ebr, J., Engel, R., Epicoco, I., Erdmann, M., Escobar, C. O., Etchegoyen, A., Falcke, H., Farmer, J., Farrar, G., Fauth, A. C., Fazzini, N., Feldbusch, F., Fenu, F., Fick, B., Figueira, J. M., Filipčič, A., Fitoussi, T., Fodran, T., Fujii, T., Fuster, A., Galea, C., Galelli, C., García, B., Vegas, A. L. Garcia, Gemmeke, H., Gesualdi, F., Gherghel-Lascu, A., Ghia, P. L., Giaccari, U., Giammarchi, M., Glombitza, J., Gobbi, F., Gollan, F., Golup, G., Berisso, M. Gómez, Vitale, P. F. Gómez, Gongora, J. P., González, J. M., González, N., Goos, I., Góra, D., Gorgi, A., Gottowik, M., Grubb, T. D., Guarino, F., Guedes, G. P., Guido, E., Hahn, S., Hamal, P., Hampel, M. R., Hansen, P., Harari, D., Harvey, V. M., Haungs, A., Hebbeker, T., Heck, D., Hill, G. C., Hojvat, C., Hörandel, J. R., Horvath, P., Hrabovský, M., Huege, T., Insolia, A., Isar, P. G., Janecek, P., Johnsen, J. A., Jurysek, J., Kääpä, A., Kampert, K. H., Keilhauer, B., Khakurdikar, A., Covilakam, V. V. Kizakke, Klages, H. O., Kleifges, M., Kleinfeller, J., Knapp, F., Kunka, N., Lago, B. L., Langner, N., de Oliveira, M. A. Leigui, Lenok, V., Letessier-Selvon, A., Lhenry-Yvon, I., Presti, D. Lo, Lopes, L., López, R., Lu, L., Luce, Q., Lundquist, J. P., Payeras, A. Machado, Mancarella, G., Mandat, D., Manning, B. C., Manshanden, J., Mantsch, P., Marafico, S., Mariani, F. M., Mariazzi, A. G., Mariş, I. C., Marsella, G., Martello, D., Martinelli, S., Bravo, O. Martínez, Mastrodicasa, M., Mathes, H. J., Matthews, J., Matthiae, G., Mayotte, E., Mayotte, S., Mazur, P. O., Medina-Tanco, G., Melo, D., Menshikov, A., Michal, S., Micheletti, M. I., Miramonti, L., Mollerach, S., Montanet, F., Morejon, L., Morello, C., Mostafá, M., Müller, A. L., Muller, M. A., Mulrey, K., Mussa, R., Muzio, M., Namasaka, W. M., Nasr-Esfahani, A., Nellen, L., Nicora, G., Niculescu-Oglinzanu, M., Niechciol, M., Nitz, D., Norwood, I., Nosek, D., Novotny, V., Nožka, L., Nucita, A, Núñez, L. A., Oliveira, C., Palatka, M., Pallotta, J., Papenbreer, P., Parente, G., Parra, A., Pawlowsky, J., Pech, M., Pękala, J., Pelayo, R., Peña-Rodriguez, J., Martins, E. E. Pereira, Armand, J. Perez, Bertolli, C. Pérez, Perrone, L., Petrera, S., Petrucci, C., Pierog, T., Pimenta, M., Pirronello, V., Platino, M., Pont, B., Pothast, M., Privitera, P., Prouza, M., Puyleart, A., Querchfeld, S., Rautenberg, J., Ravignani, D., Reininghaus, M., Ridky, J., Riehn, F., Risse, M., Rizi, V., de Carvalho, W. Rodrigues, Rojo, J. Rodriguez, Roncoroni, M. J., Rossoni, S., Roth, M., Roulet, E., Rovero, A. C., Ruehl, P., Saftoiu, A., Saharan, M., Salamida, F., Salazar, H., Salina, G., Gomez, J. D. Sanabria, Sánchez, F., Santos, E. M., Santos, E., Sarazin, F., Sarmento, R., Sarmiento-Cano, C., Sato, R., Savina, P., Schäfer, C. M., Scherini, V., Schieler, H., Schimassek, M., Schimp, M., Schlüter, F., Schmidt, D., Scholten, O., Schoorlemmer, H., Schovánek, P., Schröder, F. G., Schulte, J., Schulz, T., Sciutto, S. J., Scornavacche, M., Segreto, A., Sehgal, S., Shellard, R. C., Sigl, G., Silli, G., Sima, O., Smau, R., Šmída, R., Sommers, P., Soriano, J. F., Squartini, R., Stadelmaier, M., Stanca, D., Stanič, S., Stasielak, J., Stassi, P., Streich, A., Suárez-Durán, M., Sudholz, T., Suomijärvi, T., Supanitsky, A. D., Szadkowski, Z., Tapia, A., Taricco, C., Timmermans, C., Tkachenko, O., Tobiska, P., Peixoto, C. J. Todero, Tomé, B., Torrès, Z., Travaini, A., Travnicek, P., Trimarelli, C., Tueros, M., Ulrich, R., Unger, M., Vaclavek, L., Vacula, M., Galicia, J. F. Valdés, Valore, L., Varela, E., Vásquez-Ramírez, A., Veberič, D., Ventura, C., Quispe, I. D. Vergara, Verzi, V., Vicha, J., Vink, J., Vorobiov, S., Wahlberg, H., Watanabe, C., Watson, A. A., Weindl, A., Wiencke, L., Wilczyński, H., Wittkowski, D., Wundheiler, B., Yushkov, A., Zapparrata, O., Zas, E., Zavrtanik, D., Zavrtanik, M., Zehrer, L., and Aloisio, R.
Subjects: Astrophysics - High Energy Astrophysical Phenomena, Astrophysics - Cosmology and Nongalactic Astrophysics, High Energy Physics - Phenomenology
Abstract: Using the data of the Pierre Auger Observatory, we report on a search for signatures that would be suggestive of super-heavy particles decaying in the Galactic halo. From the lack of signal, we present upper limits for different energy thresholds above ${\gtrsim}10^8$\,GeV on the secondary by-product fluxes expected from the decay of the particles. Assuming that the energy density of these super-heavy particles matches that of dark matter observed today, we translate the upper bounds on the particle fluxes into tight constraints on the couplings governing the decay process as a function of the particle mass. Instantons, which are non-perturbative solutions to Yang-Mills equations, can give rise to decay channels otherwise forbidden and transform stable particles into meta-stable ones. Assuming such instanton-induced decay processes, we derive a bound on the reduced coupling constant of gauge interactions in the dark sector: $\alpha_X \lesssim 0.09$, for $10^{9} \lesssim M_X/\text{GeV} < 10^{19}$. Conversely, we obtain that, for instance, a reduced coupling constant $\alpha_X = 0.09$ excludes masses $M_X \gtrsim 3\times 10^{13}~$GeV. In the context of dark matter production from gravitational interactions alone during the reheating epoch, we derive constraints on the parameter space that involves, in addition to $M_X$ and $\alpha_X$, the Hubble rate at the end of inflation, the reheating efficiency, and the non-minimal coupling of the Higgs with curvature., Comment: 15 pages, 8 figures, Accompanying paper of arXiv:2203.08854, accepted for publication in Phys. Rev. D
Published: 2022

125. An HMM approach expands the landscape of sesquiterpene cyclases across the kingdom Fungi

Author: Hage, Hayat, Couillaud, Julie, Salamov, Asaf, Loussouarn-Yvon, Margot, Durbesson, Fabien, Ormeño, Elena, Grisel, Sacha, Duquesne, Katia, Vincentelli, Renaud, Grigoriev, Igor, Iacazio, Gilles, and Rosso, Marie-Noëlle
Subjects: Microbiology, Biological Sciences, Bioinformatics and Computational Biology, Genetics, Biotechnology, Human Genome, Infectious Diseases, Phylogeny, Sesquiterpenes, Terpenes, Fungi, fungi, genome, Polyporales, sesquiterpene, terpene synthase, Keywords : fungi
Abstract: Sesquiterpene cyclases (STC) catalyse the cyclization of the C15 molecule farnesyl diphosphate into a vast variety of mono- or polycyclic hydrocarbons and, for a few enzymes, oxygenated structures, with diverse stereogenic centres. The huge diversity in sesquiterpene skeleton structures in nature is primarily the result of the type of cyclization driven by the STC. Despite the phenomenal impact of fungal sesquiterpenes on the ecology of fungi and their potentials for applications, the fungal sesquiterpenome is largely untapped. The identification of fungal STC is generally based on protein sequence similarity with characterized enzymes. This approach has improved our knowledge on STC in a few fungal species, but it has limited success for the discovery of distant sequences. Besides, the tools based on secondary metabolite biosynthesis gene clusters have shown poor performance for terpene cyclases. Here, we used four sets of sequences of fungal STC that catalyse four types of cyclization, and specific amino acid motives to identify phylogenetically related sequences in the genomes of basidiomycetes fungi from the order Polyporales. We validated that four STC genes newly identified from the genome sequence of Leiotrametes menziesii, each classified in a different phylogenetic clade, catalysed a predicted cyclization of farnesyl diphosphate. We built HMM models and searched STC genes in 656 fungal genomes genomes. We identified 5605 STC genes, which were classified in one of the four clades and had a predicted cyclization mechanism. We noticed that the HMM models were more accurate for the prediction of the type of cyclization catalysed by basidiomycete STC than for ascomycete STC.
Published: 2023

126. Atmospheric muons measured with the KM3NeT detectors in comparison with updated numeric predictions

Author: Aiello, S., Albert, A., Alshamsi, M., Alves Garre, S., Ambrosone, A., Ameli, F., Andre, M., Androutsou, E., Anguita, M., Aphecetche, L., Ardid, M., Ardid, S., Arsenic, A., Atmani, H., Aublin, J., Badaracco, F., Bailly-Salins, L., Bardačová, Z., Baret, B., Bariego-Quintana, A., Pree, S. Basegmez du, Becherini, Y., Bendahman, M., Benfenati, F., Benhassi, M., Benoit, D. M., Berbee, E., Bertin, V., Biagi, S., Boettcher, M., Bonanno, D., Boumaaza, J., Bouta, M., Bouwhuis, M., Bozza, C., Bozza, R. M., Brânzaş, H., Bretaudeau, F., Breuhaus, M., Bruijn, R., Brunner, J., Bruno, R., Buis, E., Buompane, R., Busto, J., Caiffi, B., Calvo, D., Campion, S., Capone, A., Carenini, F., Carretero, V., Cartraud, T., Castaldi, P., Cecchini, V., Celli, S., Cerisy, L., Chabab, M., Chadolias, M., Chen, A., Cherubini, S., Chiarusi, T., Circella, M., Cocimano, R., Coelho, J. A. B., Coleiro, A., Condorelli, A., Coniglione, R., Coyle, P., Creusot, A., Cuttone, G., Dallier, R., Darras, Y., De Benedittis, A., De Martino, B., Decoene, V., Del Burgo, R., Del Rosso, I., Mauro, L. S. Di, Di Palma, I., Díaz, A. F., Diaz, C., Diego-Tortosa, D., Distefano, C., Domi, A., Donzaud, C., Dornic, D., Dörr, M., Drakopoulou, E., Drouhin, D., Ducoin, J.-G., Dvornický, R., Eberl, T., Eckerová, E., Eddymaoui, A., van Eeden, T., Eff, M., van Eijk, D., El Bojaddaini, I., El Hedri, S., Enzenhöfer, A., Ferrara, G., Filipović, M. D., Filippini, F., Franciotti, D., Fusco, L. A., Gagliardini, S., Gal, T., Méndez, J. García, Soto, A. Garcia, Oliver, C. Gatius, Geißelbrecht, N., Ghaddari, H., Gialanella, L., Gibson, B. K., Giorgio, E., Goos, I., Goswami, P., Gozzini, S. R., Gracia, R., Graf, K., Guidi, C., Guillon, B., Gutiérrez, M., Haack, C., van Haren, H., Heijboer, A., Hekalo, A., Hennig, L., Hernández-Rey, J. J., Ibnsalih, W. Idrissi, Illuminati, G., Joly, D., de Jong, M., de Jong, P., Jung, B. J., Kalaczyński, P., Kalekin, O., Katz, U. F., Khatun, A., Kistauri, G., Kopper, C., Kouchner, A., Kueviakoe, V., Kulikovskiy, V., Kvatadze, R., Labalme, M., Lahmann, R., Larosa, G., Lastoria, C., Lazo, A., Le Stum, S., Lehaut, G., Leonora, E., Lessing, N., Levi, G., Longhitano, F., Magnani, F., Majumdar, J., Malerba, L., Mamedov, F., Mańczak, J., Manfreda, A., Marconi, M., Margiotta, A., Marinelli, A., Markou, C., Martin, L., Marzaioli, F., Mastrodicasa, M., Mastroianni, S., Miccichè, S., Miele, G., Migliozzi, P., Migneco, E., Mitsou, M. L., Mollo, C. M., Morales-Gallegos, L., Moretti, G., Moussa, A., Mateo, I. Mozun, Muller, R., Musone, M. R., Musumeci, M., Navas, S., Nayerhoda, A., Nicolau, C. A., Nkosi, B., Fearraigh, B. Ó., Oliviero, V., Orlando, A., Oukacha, E., Paesani, D., González, J. Palacios, Papalashvili, G., Parisi, V., Pastor Gomez, E. J., Păun, A. M., Păvălaş, G. E., Pelegris, I., Peña Martínez, S., Perrin-Terrin, M., Perronnel, J., Pestel, V., Pestes, R., Piattelli, P., Poirè, C., Popa, V., Pradier, T., Prado, J., Pulvirenti, S., Quiroz-Rangel, C. A., Rahaman, U., Randazzo, N., Razzaque, S., Rea, I. C., Real, D., Riccobene, G., Robinson, J., Romanov, A., Šaina, A., Greus, F. Salesa, Samtleben, D. F. E., Losa, A. Sánchez, Sanfilippo, S., Sanguineti, M., Santonastaso, C., Santonocito, D., Sapienza, P., Schnabel, J., Schumann, J., Schutte, H. M., Seneca, J., Sennan, N., Setter, B., Sgura, I., Shanidze, R., Sharma, A., Shitov, Y., Šimkovic, F., Simonelli, A., Sinopoulou, A., Smirnov, M. V., Spisso, B., Spurio, M., Stavropoulos, D., Štekl, I., Taiuti, M., Tayalati, Y., Thiersen, H., Melo, I. Tosta e, Tragia, E., Trocmé, B., Tsourapis, V., Tudorache, A., Tzamariudaki, E., Vacheret, A., Melchor, A. Valer, Valsecchi, V., Elewyck, V. Van, Vannoye, G., Vasileiadis, G., de Sola, F. Vazquez, Veutro, A., Viola, S., Vivolo, D., Wilms, J., de Wolf, E., Yepes-Ramirez, H., Yvon, I., Zarpapis, G., Zavatarelli, S., Zegarelli, A., Zito, D., Zornoza, J. D., Zúñiga, J., and Zywucka, N.
Published: 2024
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127. MemNAS: Super-net Neural Architecture Search for Memristor-based DNN Accelerators.

Author: Sébastien Henwood, Yvon Savaria, and François Leduc-Primeau
Published: 2024
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128. MSPARQ: A RISC-V Vector Processor Array Optimized for Low-Resolution Neural Networks.

Author: Elisabeth Humblet, Théo Dupuis, Yoan Fournier, MohammadHossein AskariHemmat, François Leduc-Primeau, Jean-Pierre David, and Yvon Savaria
Published: 2024
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129. CoChrono: A Unified Hardware/Software Performance Analysis Tool for SoC-FPGA Codesign.

Author: Fabien Portas, Guy Bois, and Yvon Savaria
Published: 2024
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130. $\mathcal{S}^{3}$1DCNN: A Compact Stacked Spectral-Spatial Attention 1DCNN for Seizure Prediction with Wearables.

Author: Yang Zhang, Yvon Savaria, Mohamad Sawan, and François Leduc-Primeau
Published: 2024
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131. Real-Time Spacecraft Pose Estimation Using Mixed-Precision Quantized Neural Network on COTS Reconfigurable MPSoC.

Author: Julien Posso, Guy Bois, and Yvon Savaria
Published: 2024
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132. Digital Compensation of Timing-Skew Mismatches in TI-ADCs by Modulation and Source Separation.

Author: Hamidreza Mafi, Naim Ben-Hamida, Sadok Aouini, and Yvon Savaria
Published: 2024
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133. A Flexible Thermal/Solar Energy Harvesting System with Hysteretic Control and Maximum Power Point Tracking Regulation for IoT Devices.

Author: Karim Kaced, Sebastien Genevey, Yvon Savaria, and Jean-Pierre David
Published: 2024
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134. Translate your Own: a Post-Editing Experiment in the NLP domain.

Author: Rachel Bawden, Ziqian Peng, Maud Bénard, éric de la Clergerie, Raphaël Esamotunu, Mathilde Huguin, Natalie Kübler, Alexandra Mestivier, Mona Michelot, Laurent Romary, Lichao Zhu, and François Yvon
Published: 2024

135. À propos des difficultés de traduire automatiquement de longs documents.

Author: Ziqian Peng, Rachel Bawden, and François Yvon
Published: 2024

136. Optimiser le choix des exemples pour la traduction automatique augmentée par des mémoires de traduction.

Author: Maxime Bouthors, Josep Maria Crego, and François Yvon
Published: 2024

137. Vers la traduction automatique des néologismes scientifiques.

Author: Paul Lerner and François Yvon
Published: 2024

138. Retrieving Examples from Memory for Retrieval Augmented Neural Machine Translation: A Systematic Comparison.

Author: Maxime Bouthors, Josep Maria Crego, and François Yvon
Published: 2024
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139. MaskLID: Code-Switching Language Identification through Iterative Masking.

Author: Amir Hossein Kargaran, François Yvon, and Hinrich Schütze
Published: 2024

140. Joint Cloud Removal and Classification of Sentinel-2 Image Time Series for Agricultural Land Cover Mapping in Northern Benin.

Author: Bruno Bio Nikki Sarè, Raffaele Gaetano, Roberto Interdonato, Yvon Carmen Hountondji, Dino Ienco, and Cássio Fraga Dantas
Published: 2024
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141. Normal and Resilient Mode FPGA-based Access Gateway Function Through P4-generated RTL.

Author: Mostafa Abbasmollaei, Tarek Ould-Bachir, and Yvon Savaria
Published: 2024
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142. Enhancing P4 Syntax to Support Extended Finite State Machines as Native Stateful Objects.

Author: Florent Allard, Tarek Ould-Bachir, and Yvon Savaria
Published: 2024
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143. GlotScript: A Resource and Tool for Low Resource Writing System Identification.

Author: Amir Hossein Kargaran, François Yvon, and Hinrich Schütze
Published: 2024

144. Utilization of Noise-Shaping in Mixed-Signal Timing-Skew Mismatch Calibration of TI-ADCs.

Author: Hamidreza Mafi, Mohamed Amine Bensenouci, Sadok Aouini, Mohammad Honarparvar, Naim Ben-Hamida, and Yvon Savaria
Published: 2024
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145. Evolving Presentation of Self: The Influence of Dementia Communication Challenges on Everyday Interactions.

Author: Yvon Ruitenburg, Minha Lee, Panos Markopoulos 0001, and Wijnand A. IJsselsteijn
Published: 2024
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146. Nonlinear compressive reduced basis approximation for multi-parameter elliptic problem

Author: Ballout, Hassan, Maday, Yvon, Prud’homme, Christophe, DeVore, Ronald, editor, and Kunoth, Angela, editor
Published: 2024
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147. Cryogenic Hardening to Improve the Efficiency of the Honing Process When Machining Parts Made from Low-Carbon Steel

Author: Nkeoua, J. A. Yvon, Chigirinsky, Yu. L., Kursin, О. А., Zhdanov, А. А., Polyanchikova, М. Yu., Chaari, Fakher, Series Editor, Gherardini, Francesco, Series Editor, Ivanov, Vitalii, Series Editor, Haddar, Mohamed, Series Editor, Cavas-Martínez, Francisco, Editorial Board Member, di Mare, Francesca, Editorial Board Member, Kwon, Young W., Editorial Board Member, Tolio, Tullio A. M., Editorial Board Member, Trojanowska, Justyna, Editorial Board Member, Schmitt, Robert, Editorial Board Member, Xu, Jinyang, Editorial Board Member, Radionov, Andrey A., editor, and Gasiyarov, Vadim R., editor
Published: 2024
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148. Uncertainties Impact and Mitigation with an Adaptive Model-Based Voltage Controller

Author: Putratama, Muhammad Andy, Rigo-Mariani, Rémy, Debusschere, Vincent, Bésanger, Yvon, Angrisani, Leopoldo, Series Editor, Arteaga, Marco, Series Editor, Chakraborty, Samarjit, Series Editor, Chen, Jiming, Series Editor, Chen, Shanben, Series Editor, Chen, Tan Kay, Series Editor, Dillmann, Rüdiger, Series Editor, Duan, Haibin, Series Editor, Ferrari, Gianluigi, Series Editor, Ferre, Manuel, Series Editor, Jabbari, Faryar, Series Editor, Jia, Limin, Series Editor, Kacprzyk, Janusz, Series Editor, Khamis, Alaa, Series Editor, Kroeger, Torsten, Series Editor, Li, Yong, Series Editor, Liang, Qilian, Series Editor, Martín, Ferran, Series Editor, Ming, Tan Cher, Series Editor, Minker, Wolfgang, Series Editor, Misra, Pradeep, Series Editor, Mukhopadhyay, Subhas, Series Editor, Ning, Cun-Zheng, Series Editor, Nishida, Toyoaki, Series Editor, Oneto, Luca, Series Editor, Panigrahi, Bijaya Ketan, Series Editor, Pascucci, Federica, Series Editor, Qin, Yong, Series Editor, Seng, Gan Woon, Series Editor, Speidel, Joachim, Series Editor, Veiga, Germano, Series Editor, Wu, Haitao, Series Editor, Zamboni, Walter, Series Editor, Tan, Kay Chen, Series Editor, Pierfederici, Serge, editor, and Martin, Jean-Philippe, editor
Published: 2024
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149. Blunted food conditioned place preference-like behavior in adolescent-stressed male hamsters

Author: Moran, Kevin M., Jarrell, Leah, Khashchuluun, Misheel, Moran, Kurt R., Rodriguez, Julia, Tran, Anna, and Delville, Yvon
Published: 2025
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150. Fieldwork on animals living in extreme conditions as a source of biomedical innovation

Author: Le Maho, Yvon, Tasiemski, Aurélie, Bertile, Fabrice, and Bulet, Philippe
Published: 2025
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