151. Major Histocompatibility Complex Class I (FLA-E*01801) Molecular Structure in Domestic Cats Demonstrates Species-Specific Characteristics in Presenting Viral Antigen Peptides
- Author
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Yanan Wu, Nianzhi Zhang, Zibin Li, Junya Wang, Lijie Zhang, Chun Xia, Zehui Qu, Ruiying Liang, Lizhen Ma, Nan Zhang, Yanjie Liu, Yaping Sun, and Xiaohui Wei
- Subjects
0301 basic medicine ,Feline immunodeficiency virus ,Amino Acid Motifs ,Immunology ,Antigen presentation ,Gene Products, gag ,Peptide binding ,Peptide ,Immunodeficiency Virus, Feline ,Crystallography, X-Ray ,Major histocompatibility complex ,Microbiology ,Epitope ,03 medical and health sciences ,0302 clinical medicine ,Virology ,MHC class I ,Animals ,Humans ,AIDS Vaccines ,chemistry.chemical_classification ,Antigen Presentation ,Binding Sites ,biology ,Histocompatibility Antigens Class I ,biology.organism_classification ,030104 developmental biology ,chemistry ,Insect Science ,Lentivirus ,Cats ,HIV-1 ,biology.protein ,Pathogenesis and Immunity ,Peptides ,030215 immunology - Abstract
Feline immunodeficiency virus (FIV) infection in domestic cats is the smallest usable natural model for lentiviral infection studies. FLA-E*01801 was applied to FIV AIDS vaccine research. We determined the crystal structure of FLA-E*01801 complexed with a peptide derived from FIV (gag positions 40 to 48; RMANVSTGR [RMA9]). The A pocket of the FLA-E*01801 complex plays a valuable restrictive role in peptide binding. Mutation experiments and circular-dichroism (CD) spectroscopy revealed that peptides with Asp at the first position (P1) could not bind to FLA-E*01801. The crystal structure and in vitro refolding of the mutant FLA-E*01801 complex demonstrated that Glu 63 and Trp 167 in the A pocket play important roles in restricting P1D. The B pocket of the FLA-E*01801 complex accommodates M/T/A/V/I/L/S residues, whereas the negatively charged F pocket prefers R/K residues. Based on the peptide binding motif, 125 FLA-E*01801-restricted FIV nonapeptides (San Diego isolate) were identified. Our results provide the structural basis for peptide presentation by the FLA-E*01801 molecule, especially A pocket restriction on peptide binding, and identify the potential cytotoxic T lymphocyte (CTL) epitope peptides of FIV presented by FLA-E*01801. These results will benefit both the reasonable design of FLA-E*01801-restricted CTL epitopes and the further development of the AIDS vaccine. IMPORTANCE Feline immunodeficiency virus (FIV) is a viral pathogen in cats, and this infection is the smallest usable natural model for lentivirus infection studies. To examine how FLA I presents FIV epitope peptides, we crystallized and solved the first classic feline major histocompatibility complex class I (MHC-I) molecular structure. Surprisingly, pocket A restricts peptide binding. Trp 167 blocks the left side of pocket A, causing P1D to conflict with Glu 63 . We also identified the FLA-E*01801 binding motif X (except D)-(M/T/A/V/I/L/S)-X-X-X-X-X-X-(R/K) based on structural and biochemical experiments. We identified 125 FLA-E*01801-restricted nonapeptides from FIV. These results are valuable for developing peptide-based FIV and human immunodeficiency virus (HIV) vaccines and for studying how MHC-I molecules present peptides.
- Published
- 2018
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