640 results on '"Linlin Xu"'
Search Results
152. Data from HER2/EGFR–AKT Signaling Switches TGFβ from Inhibiting Cell Proliferation to Promoting Cell Migration in Breast Cancer
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Ye-Guang Chen, Shiwen Luo, Jing-Dong J. Han, Xin-Hua Feng, Xiang H.-F. Zhang, Fang Liu, Zai Chang, Hongwei Liao, Hai Wang, Fenfang Chen, Chi Xu, Linlin Xu, Yuzhen Li, Qiaoni Shi, and Fei Huang
- Abstract
TGFβ signaling inhibits cell proliferation to block cancer initiation, yet it also enhances metastasis to promote malignancy during breast cancer development. The mechanisms underlying these differential effects are still unclear. Here, we report that HER2/EGFR signaling switches TGFβ function in breast cancer cells from antiproliferation to cancer promotion. Inhibition of HER2/EGFR activity attenuated TGFβ–induced epithelial–mesenchymal transition and migration but enhanced the antiproliferative activity of TGFβ. Activation of HER2/EGFR induced phosphorylation of Smad3 at Ser208 of the linker region through AKT, which promoted the nuclear accumulation of Smad3 and subsequent expression of the genes related to EMT and cell migration. In contrast, HER2/EGFR signaling had no effects on the nuclear localization of Smad2. Knockdown of Smad3, but not Smad2, blocked TGFβ–induced breast cancer cell migration. We observed a positive correlation between the nuclear localization of Smad3 and HER2 activation in advanced human breast cancers. Our results demonstrate a key role for HER2/EGFR in differential regulation of Smad3 activity to shift TGFβ function from antitumorigenic to protumorigenic during breast cancer development.Significance: TGFβ signaling can shift from inhibiting to promoting breast cancer development via HER2/EGFR AKT-mediated phosphorylation of Smad3 at S208, enhancing its nuclear accumulation and upregulation of EMT-related genes.Graphical Abstract: http://cancerres.aacrjournals.org/content/canres/78/21/6073/F1.large.jpg. Cancer Res; 78(21); 6073–85. ©2018 AACR.
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- 2023
153. Data from Cell Adhesion Molecule CD166 Drives Malignant Progression and Osteolytic Disease in Multiple Myeloma
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Edward F. Srour, Attaya Suvannasankha, John Chirgwin, Melissa A. Kacena, Rafat Abonour, Helmut Hanenberg, Christophe Machal, Angelo A. Cardoso, Yinghua Cheng, Bradley Poteat, Colin Crean, Hao Wu, Khalid S. Mohammad, and Linlin Xu
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Multiple myeloma is incurable once osteolytic lesions have seeded at skeletal sites, but factors mediating this deadly pathogenic advance remain poorly understood. Here, we report evidence of a major role for the cell adhesion molecule CD166, which we discovered to be highly expressed in multiple myeloma cell lines and primary bone marrow cells from patients. CD166+ multiple myeloma cells homed more efficiently than CD166− cells to the bone marrow of engrafted immunodeficient NSG mice. CD166 silencing in multiple myeloma cells enabled longer survival, a smaller tumor burden, and less osteolytic lesions, as compared with mice bearing control cells. CD166 deficiency in multiple myeloma cell lines or CD138+ bone marrow cells from multiple myeloma patients compromised their ability to induce bone resorption in an ex vivo organ culture system. Furthermore, CD166 deficiency in multiple myeloma cells also reduced the formation of osteolytic disease in vivo after intratibial engraftment. Mechanistic investigation revealed that CD166 expression in multiple myeloma cells inhibited osteoblastogenesis of bone marrow–derived osteoblast progenitors by suppressing Runx2 gene expression. Conversely, CD166 expression in multiple myeloma cells promoted osteoclastogenesis by activating TRAF6-dependent signaling pathways in osteoclast progenitors. Overall, our results define CD166 as a pivotal director in multiple myeloma cell homing to the bone marrow and multiple myeloma progression, rationalizing its further study as a candidate therapeutic target for multiple myeloma treatment. Cancer Res; 76(23); 6901–10. ©2016 AACR.
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- 2023
154. A Hybrid Model of Primary Ensemble Empirical Mode Decomposition and Quantum Neural Network in Financial Time Series Prediction
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Caifeng Wang, Yukun Yang, Linlin Xu, and Alexander Wong
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General Mathematics ,General Physics and Astronomy - Abstract
Financial time series are nonlinear, volatile and chaotic. Inspired by quantum computing, this paper proposed a new model, called primary ensemble empirical mode decomposition combined with quantum neural network (PEEMD-QNN) in predicting the stock index. PEEMD-QNN takes the advantages of the PEEMD which retains the main component of modal component and QNN. To demonstrate that our PEEMD-QNN model is robust, we used the new model to predict six major stock index time series in China at a specific time. Detailed experiments are implemented for both of the proposed prediction models, in which empirical mode decomposition combined with QNN (EMD-QNN), QNN and BP neural network are compared. The results demonstrate that the proposed PEEMD-QNN model has higher accuracy than BP neural network, QNN model and EMD-QNN model in stock market prediction.
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- 2023
155. Genomic Characterization of Patients in a Phase 2 Study of Zanubrutinib in BTK Inhibitor-Intolerant Patients with Relapsed/Refractory B-Cell Malignancies
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Linlin Xu, Mazyar Shadman, Anusha Ponakala, Ian W. Flinn, Moshe Yair Levy, Ryan Porter, John M. Burke, Syed F. Zafar, Jennifer L. Cultrera, Jamal Misleh, Edwin C. Kingsley, Habte Yimer, Benjamin Freeman, Arvind Chaudhry, Praveen K. Tumula, Mitul Gandhi, Aileen Cohen, Dih-Yih Chen, Sudhir Manda, Jeff P. Sharman, and Vanitha Ramakrishnan
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Immunology ,Cell Biology ,Hematology ,Biochemistry - Published
- 2022
156. Antitumor effect of the selective hypoxia-inducible factor-1 inhibitors echinomycin and PX-478 on uterine fibroids
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Linlin Xu, Hiroshi Ishikawa, Yanruo Zhou, Tatsuya Kobayashi, and Makio Shozu
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Mice ,Embryology ,Ki-67 Antigen ,Mustard Compounds ,Leiomyoma ,Phenylpropionates ,Reproductive Medicine ,Animals ,Humans ,Female ,Echinomycin ,Hypoxia-Inducible Factor 1 ,Hypoxia - Abstract
To investigate the antitumor effects of the selective hypoxia-inducible factor-1 (HIF-1) inhibitors echinomycin and PX-478 on uterine fibroids.Experimental study using in vitro primary culture systems and an in vivo mouse xenograft model.Academic university center.Women with uterine fibroids who underwent hysterectomy or myomectomy.Administration of the selective HIF-1 inhibitors echinomycin and PX-478 to the media of the primary cultured uterine fibroid cells and to nonobese diabetic/severe combined immunodeficient mice bearing fibroid xenografts consisting of the primary cultured fibroid cells and type Ⅰ collagen gels beneath the kidney capsule.Cell proliferation was measured by Cell Counting Kit-8 assay. Apoptosis was evaluated by terminal deoxynucleotidyl transferase-mediated dUTP nick end labeling assay and by measuring caspase 3 and 7 activities. The xenografts were evaluated by gross appearance, surface area, and histology. The Ki-67 index was measured to evaluate proliferation of the xenografts.Both echinomycin and PX-478 inhibited cell proliferation and induced apoptosis in fibroid cells cultured under hypoxia and normoxia. Enlargement of the fibroid xenografts was significantly attenuated. The Ki-67 index significantly decreased after the administration of the HIF-1 inhibitors in the xenograft model. Eight of 27 xenografts treated with the HIF-1 inhibitors contained calcification and hyalinizing components from 3 days after the grafting to 2 weeks, suggesting that the HIF-inhibitors induce degeneration of the fibroid xenografts.The selective HIF-1 inhibitors echinomycin and PX-478 show antitumor effects against uterine fibroids both in vitro and in vivo. These findings support the potential use of HIF-1 inhibitors for the treatment of uterine fibroids.
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- 2022
157. Chinese international doctoral students’ perceptions of publishing: a time–space perspective
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Linlin Xu
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Education - Published
- 2022
158. Uncertainty Quantification of Electromagnetic Exposure of Human Body with Medical Aortic Valve Stent Implants under an EV-WPT Device.
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Tianhao Wang, Bo Li, Quanyi Yu, Yangyun Wu, Linlin Xu, Yaodan Chi, and Baizhi Li
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POLYNOMIAL chaos ,HUMAN body ,ORTHOGONAL matching pursuit ,WIRELESS power transmission ,ELECTROMAGNETIC fields ,ELECTROMAGNETIC coupling - Abstract
With the gradual popularization of high-power electric vehicle wireless power transfer (EV-WPT) applications, the safety issue of human exposure to electromagnetic fields leaked from EV-WPT devices has received considerable attention. In particular, careful attention should be devoted to human protection from electromagnetic field issues among people with medical implants. Considering the electromagnetic coupling between a human aortic valve metal stent (AVS) and the leakage field, this study establishes a numerical simulation model of the electromagnetic exposure of a human implanted with AVS to the leakage electromagnetic field of EV-WPT on the basis of human medical ethics. Given the existence of many uncertainties in actual WPT charging, which may cause damage to a human heart implanted with AVS, an orthogonal matching pursuit sparse generalized polynomial chaos expansion (OMP-sgPCE) method is developed to conduct an uncertainty quantification of the maximum induced electric field intensity (Emax) of a human heart implanted with AVS. Results indicate that the induced Emax obtained by this method can exceed the ICNIRP guideline limit and may seriously endanger human heart safety. This study also adopts the Sobol method to obtain the degree of influence of the coil group's spatial location parameters and the AVS geometric parameters on the induced Emax, thereby providing a reasonable theoretical basis and scientific guidance for the optimal design of EV-WPT devices and AVS. [ABSTRACT FROM AUTHOR]
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- 2023
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159. Structure–texture image decomposition via non-convex total generalized variation and convolutional sparse coding
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Chunxue Wang, Linlin Xu, and Ligang Liu
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Computer Vision and Pattern Recognition ,Computer Graphics and Computer-Aided Design ,Software - Published
- 2022
160. Efficiency Optimization of Wireless Power Transfer System for Electric Vehicle Based on Improved Marine Predators Algorithm
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Quanyi Yu, Jun Lin, Xilai Ma, Bo Li, Linlin Xu, and Tianhao Wang
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Mechanical Engineering ,Automotive Engineering ,Computer Science Applications - Published
- 2022
161. Depthwise Separable ResNet in the MAP Framework for Hyperspectral Image Classification
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Zihao Liu, Linlin Xu, Zhiguo Ma, Fang Wang, Yiyi Ma, Ye Chen, Wei Wu, and Kui Li
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Pointwise ,Conditional random field ,Artificial neural network ,business.industry ,Computer science ,Deep learning ,0211 other engineering and technologies ,Hyperspectral imaging ,Pattern recognition ,02 engineering and technology ,Overfitting ,Geotechnical Engineering and Engineering Geology ,Convolution ,Maximum a posteriori estimation ,Artificial intelligence ,Electrical and Electronic Engineering ,business ,021101 geological & geomatics engineering - Abstract
To build small and efficient neural networks for hyperspectral image (HSI) classification, this letter presents a depthwise separable residual neural network (ResNet). This approach, motivated by the popular MobileNet architecture, decomposes the traditional spatial-spectral convolution operation into a spatial-independent pointwise spectral convolution and a spectral-independent depthwise spatial convolution. It allows the separation of spectral and spatial information in HSI and also greatly reduces the network size to prevent the overfitting issue. To better preserve the class boundaries and edges, the proposed ResNet is integrated into a maximum a posteriori (MAP) framework to allow the use of the conditional random field (CRF) model. The experiment results on benchmark HSI scene demonstrate that the proposed ResNet compares favorably with several popular deep learning HSI classifiers and that the ResNet-CRF approach achieves higher accuracy and better boundaries among neighboring classes.
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- 2022
162. Estimating Noise Floor in Sentinel-1 Images With Linear Programming and Least Squares
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David A. Clausi, Linlin Xu, and Peter Q. Lee
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Synthetic aperture radar ,Computer science ,Estimation theory ,General Earth and Planetary Sciences ,Affine transformation ,Electrical and Electronic Engineering ,Antenna (radio) ,Geometric programming ,Algorithm ,Least squares ,Noise floor ,Radiation pattern - Abstract
Sentinel-1 is a synthetic aperture radar platform that provides free and open-source images of the Earth. A product type of Sentinel-1 is ground range detected (GRD), which records intensity while discarding phase information from the radar backscatter. Especially in cross-polarized GRD images, there are noticeable intensity changes throughout the image that are caused by amplifying the noise floor of the signal, which varies due to the nonuniform radiation pattern of the satellite's antenna. While Sentinel-1 has instrument processing facility (IPF) software to estimate the noise floor, even in the newer versions (3.1 or above) of the IPF software there are still instances where the estimates provided do not fit the actual noise floor in the image, which is particularly noticeable in transitions between adjacent subswaths. In this work, we propose a method that reduces the impact of the varying noise-floor throughout the image. The method models the intensity of the noise floor to be a power function of the radiation pattern power. The method divides the swath into several sections depending on the location of the local minimum and maximum of the radiation pattern power with respect to the range. The parameter estimation is portrayed as a geometric programming problem that is transformed into a linear programming problem by logarithmic transformation. Affine offsets are computed for each subswath by a weighted least squares approach. Vast improvement is found on extra-wide (EW) and interferometric wide (IW) Sentinel-1 modes over cross-polarized images. Code implementation is available at https://github.com/PeterQLee/sentinel1_denoise_rs.
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- 2022
163. BCUN: Bayesian Fully Convolutional Neural Network for Hyperspectral Spectral Unmixing
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Yuan Fang, Yuxian Wang, Linlin Xu, Rongming Zhuo, Alexander Wong, and David A. Clausi
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General Earth and Planetary Sciences ,Electrical and Electronic Engineering - Published
- 2022
164. Synergistic relationship or not? Understanding the resilience and efficiency of the tourism economy: evidence from Hainan Province, China
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Pengfei Zhang, Hu Yu, Linlin Xu, Wei Guo, and Mingzhe Shen
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Economics and Econometrics ,Geography, Planning and Development ,Management, Monitoring, Policy and Law - Published
- 2023
165. Aberrant expression of the extracellular matrix component Biglycan regulated by Hedgehog signalling promotes colorectal cancer cell proliferation
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Shaopeng, Zeng, Feifei, Zhou, Yiqing, Wang, Zhenyu, Zhai, Linlin, Xu, Hailong, Wang, Xinping, Chen, Shiwen, Luo, and Minzhang, Cheng
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Pregnancy ,Biglycan ,Biophysics ,Humans ,Female ,Hedgehog Proteins ,General Medicine ,Colorectal Neoplasms ,Biochemistry ,Cell Proliferation ,Extracellular Matrix - Abstract
Hedgehog (Hh) signalling plays essential roles in regulating embryonic development and contributes to tumour initiation, growth and progression in multiple cancers. The detailed mechanism by which Hh signalling participates in tumour growth warrants thorough study, although several downstream target genes have been identified. Herein, a set of novel targets of Hh signalling was identified in multiple types of tumour cells via RNA-Seq analysis. Among these targets, the expression regulation and oncogenic function of the extracellular matrix component biglycan (BGN) were investigated. Further investigation verified that Hh signalling activates the expression of BGN via the transcription factor Gli2, which directly binds to the promoter region of BGN. Functional assays revealed that BGN facilitates tumour cell growth and proliferation in colorectal cancer (CRC) cells, and xenograft assays confirmed that BGN also promotes tumour growth . Moreover, analysis of clinical CRC samples showed that both the protein and mRNA levels of BGN are increased in CRC tissues compared to those in adjacent tissues, and higher expression of BGN is correlated with poorer prognosis of CRC patients, further confirming the function of BGN in CRC. Taken together, aberrantly activated Hh signalling increases the expression of BGN, possibly regulates the extracellular matrix, and thereby promotes tumour growth in CRC.
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- 2021
166. Characterization of dry biopotential electrodes.
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Li Xie, Geng Yang, Linlin Xu, Fernando Seoane, Qiang Chen 0014, and Li-Rong Zheng 0001
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- 2013
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167. Deep convolutional neural network with random field model for lake ice mapping from Sentinel-1 imagery
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Rui Wu, Claude R. Duguay, Yiyi Ma, Ye Chen, Kui Li, Zihao Liu, Zhiguo Ma, Linlin Xu, Linglong Wangqu, and Jiabin Pu
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Random field ,Cover (telecommunications) ,Fishing ,General Earth and Planetary Sciences ,Lake ice ,Physical geography ,Convolutional neural network ,Geology - Abstract
Timely information on lake ice cover conditions is critical in support of commercial shipping, winter-road transportation, and winter leisure activities such as snowmobiling and ice fishing. Monito...
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- 2021
168. Relationship Between Blood Glucose Level and Prevalence and Frequency of Stress Urinary Incontinence in Women
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Youyou Ying, Tianxi Chen, Lixia Tang, Xinghong Wang, Ruofei Huang, Linlin Xu, and Ke Li
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Blood Glucose ,Male ,medicine.medical_specialty ,National Health and Nutrition Examination Survey ,business.industry ,Urinary Incontinence, Stress ,Urology ,Obstetrics and Gynecology ,Urinary incontinence ,Nutrition Surveys ,Positive correlation ,Logistic regression ,Confidence interval ,Clinical Practice ,Cross-Sectional Studies ,Internal medicine ,Prevalence ,medicine ,Humans ,Female ,Surgery ,medicine.symptom ,business - Abstract
OBJECTIVES The purpose of this study was to evaluate the relationship between blood glucose level and the prevalence and frequency of stress urinary incontinence (SUI) in women. METHODS We conducted a cross-sectional study of female participants in the National Health and Nutrition Examination Survey database between 2007 and 2016. Dose-response analysis curves and univariate and multivariate logistic regressions were used to determine the relationship between blood glucose level and the prevalence and frequency of SUI. RESULTS A total of 10,771 participants were included in this study, of which 6,466 (60.0%) reported no SUI, 4,305 (31.1%) reported monthly SUI, and 953 (8.8%) reported weekly SUI. We found that the blood glucose levels were higher in the weekly SUI group than in the monthly SUI and no SUI groups. Based on blood glucose levels, participants were divided into 3 groups: ≤86.0 mg/dL group, >86.0 to 98.0 mg/dL group, and >98.0 mg/dL group. Dose-response curves showed a nonlinear positive correlation between blood glucose levels and the prevalence and extent of SUI, and participants in the glucose >98.0 mg/dL group had a 15.2% higher risk (adjusted odds risk, 1.152; 95% confidence interval, 1.027-1.293; P = 0.016) of SUI prevalence and 12.5% higher risk (adjusted odds risk 1.125; 95% confidence interval, 1.009-1.255; P = 0.034) of SUI frequency than participants in the glucose ≤86.0 mg/dL group. CONCLUSIONS We found that the prevalence and frequency of SUI in women were positively correlated with blood glucose levels, and these findings warrant further study and application to clinical practice to control SUI in women.
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- 2021
169. Emergence and genomics of OXA-232-producing Klebsiella pneumoniae in a hospital in Yancheng, China
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Ya Xu, Yumei Xu, Hong Du, Chunlei Shi, Ruifu Yang, Zhichen Zhu, Min Wang, Liang Chen, Haifeng Huang, Jinnan Lv, and Linlin Xu
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0301 basic medicine ,Microbiology (medical) ,China ,Klebsiella pneumoniae ,Clonal dissemination ,030106 microbiology ,Immunology ,Genomics ,Biology ,Genome ,Microbiology ,beta-Lactamases ,Transposition (music) ,03 medical and health sciences ,0302 clinical medicine ,Humans ,Immunology and Allergy ,030212 general & internal medicine ,Genetic elements ,Phylogeny ,Whole genome sequencing ,Genetics ,OXA-232 ,Phylogenetic tree ,biology.organism_classification ,Hospitals ,QR1-502 ,Klebsiella Infections ,Multiple drug resistance ,ST15 - Abstract
Objectives This study aims to infer phylogenetic relationship of OXA-232-producing Klebsiella pneumoniae (OXA232Kp) strains collected from a Chinese hospital, and to determine the composition and genetic background of antimicrobial resistance genes (ARGs) among these strains. Methods A total of three non-duplicated OXA232Kp strains were collected from a Chinese hospital. Whole genome sequencing (WGS) was used to determined their genome sequences, and then a genomic comparison of ARG-carrying genetic elements from these three strains with related sequences were performed. Phylogenetic analysis was conducted by constructing maximum-likelihood phylogenetic tree. Results Compared with other Chinese sequence type 15 (ST15)-OXA232Kp strains, three ST15-OXA232Kp strains in this study could be divided into a single subgroup in phylogenetic relationship. The composition and genetic background of ARGs were identical in these three strains. A total of three ARG-carrying genetic elements or multidrug resistance (MDR) regions were determined, including a truncated Tn2013-like IS-based transposition unit, a unit transposition Tn6867b and a 40.9-kb MDR region. Conclusions This study reported a clonal dissemination of ST15-OXA232Kp strains carrying multiple ARGs in a Chinese hospital. A comprehensive evolutionary and genomic analysis gained a deeper understanding of OXA232Kp. Further surveillance and study should be advocated to prevent the dissemination of OXA232Kp strains in China.
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- 2021
170. Holdase/Foldase Mimetic Nanochaperone Improves Antibody-Based Cancer Immunotherapy
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Yongxin Zhang, Hao Fu, Jiajing Chen, Linlin Xu, Yingli An, Rujiang Ma, Chunlei Zhu, Yang Liu, Feihe Ma, and Linqi Shi
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General Materials Science ,General Chemistry - Abstract
Despite unprecedented successes of antibody-based cancer immunotherapy, the serious side effects and rapid clearance following systemic administration remain big challenges to realize its full potential. At the same time, combination immunotherapy using multiple antibodies has shown particularly promising in cancer treatment. It is noticed that the working mechanisms of natural holdase and foldase chaperone are desirable to overcome the limitations of therapeutic antibodies. Holdase chaperone stabilizes unfolded client and prevents it from activation and degradation, while foldase chaperone assists unfolded client to its native state to function. Here a holdase/foldase mimetic nanochaperone (H/F-nChap) to co-delivery two types of monoclonal antibodies (mAbs), αCD16 and αPDL1, and resiquimod (R848) is developed, which significantly improves cancer immunotherapy. The H/F-nChap presents holdase activity in blood and normal tissues that hides and protects mAbs from unnecessary targeted activation and degradation, thereby prolonging blood circulation and reducing immunotoxicity in vivo. Furthermore, H/F-nChap switches to foldase activity in the tumor microenvironment that exposes mAbs and releases R848 to enhance the engagement between NK cells and tumor cells and promote immune activation, respectively. The H/F-nChap represents a strategy for safe and spatiotemporal delivery of multiple mAbs, providing a promising platform for improved cancer immunotherapy.
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- 2022
171. Evolution of the landscape pattern in the Xin'an River Basin and its response to tourism activities
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Linlin Xu, Hu Yu, and Linsheng Zhong
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Environmental Engineering ,Environmental Chemistry ,Pollution ,Waste Management and Disposal - Published
- 2023
172. Academic identity formation: the influence of space
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Mark Barrow and Linlin Xu
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Linguistics and Language ,Novice nurse ,Nurse academics ,Perception ,media_common.quotation_subject ,Pedagogy ,Sociology ,Space (commercial competition) ,Identity formation ,Social Sciences (miscellaneous) ,Education ,Qualitative research ,media_common - Abstract
This qualitative study explores novice nurse academics’ experiences and perceptions of academic identity formation through the theoretical lens of space. We analyse the data from four participants ...
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- 2021
173. Risk perceptions and behavioral intentions of wildlife tourists during the COVID-19 pandemic in China
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Linlin Xu, Li Cong, Geoffrey Wall, and Hu Yu
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media_common.quotation_subject ,Wildlife tourism ,Geography, Planning and Development ,Wildlife ,Theory of planned behavior ,Risk perception ,Geography ,Ecotourism ,Tourism, Leisure and Hospitality Management ,Perception ,Pandemic ,Socioeconomics ,China ,media_common - Abstract
The COVID-19 pandemic is having a huge impact on global tourism, including wildlife tourism. Based on the Theory of Planned Behavior (TPB), risk perceptions of wildlife tourism are explored and a s...
- Published
- 2021
174. Improved Reliability of AlGaN-Based Deep Ultraviolet LED With Modified Reflective N-Type Electrode
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Linlin Xu, Wei Zhang, Feng Wu, Ange Wang, Zhang Huixue, Jiangnan Dai, Zhihua Zheng, Changqing Chen, Shuang Zhang, and Maocheng Shan
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Materials science ,Passivation ,business.industry ,Wide-bandgap semiconductor ,Solder paste ,medicine.disease_cause ,Electronic, Optical and Magnetic Materials ,law.invention ,law ,Electrode ,medicine ,Optoelectronics ,Electrical and Electronic Engineering ,business ,Layer (electronics) ,Ultraviolet ,Diode ,Light-emitting diode - Abstract
Cr/Al/Ti/Au stacks with two thicknesses of Al layers were employed as reflective n-type electrodes for 274 nm AlGaN-based flip-chip deep ultraviolet light-emitting diodes (DUV LEDs). Large bulges arose in the annealed n-type electrode with 120-nm-thick Al layer, resulting in cracks within the upper rugged SiO2 passivation layer after burn-in test. Sn atoms from solder paste migrated along the cracks and served as leakage current channels, which accelerated device degradation. In contrast, the annealed n-type electrode with 60-nm-thick Al layer retained uniform morphology. And the DUV LEDs with such n-type electrode exhibited good reliability and normalized optical power of 86.8% after burn-in test of 1000 h. This study provides insight into electrode defects related degradation behavior and helps to improve the reliability of AlGaN-based flip-chip DUV LEDs with reflective electrode.
- Published
- 2021
175. A combination of metformin and insulin improve cardiovascular and cerebrovascular risk factors in individuals with type 1 diabetes mellitus
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Linlin Xu, Wei Wang, and Wei Song
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Blood Glucose ,Endocrinology, Diabetes and Metabolism ,General Medicine ,Pulse Wave Analysis ,Metformin ,Lipoproteins, LDL ,Endocrinology ,Cholesterol ,Diabetes Mellitus, Type 1 ,Double-Blind Method ,Risk Factors ,Insulin, Regular, Human ,Internal Medicine ,Humans ,Hypoglycemic Agents ,Insulin ,Lipoproteins, HDL ,Triglycerides - Abstract
This study aims to further clarify whether the addition of metformin to insulin treatment improve cardiovascular and cerebrovascular risk factors in individuals with T1DM.Electronic databases were searched for randomized controlled trials in which the efficacy and safety of metformin were compared with those of a placebo for risk factors of cardiovascular and cerebrovascular disease among individuals with T1DM, and a meta-analysis was conducted.Thirteen cardiovascular studies were identified. In the metformin group, mean carotid intimal media thickness was significantly reduced by 0.03 mm, ascending aortic pulse wave velocity by 6.3 m/s, descending aortic wall shear stress by 1.77 dyn/cmMetformin can ameliorate cardiovascular and cerebrovascular risk factors through non-hypoglycemic multiple pathways in individuals with T1DM.
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- 2022
176. A novel splicing mutation of ANK1 is associated with phenotypic heterogeneity of hereditary spherocytosis in a Chinese family
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Linlin Xu, Xiaofeng Wei, Guanxia Liang, Dina Zhu, Yanxia Zhang, Yang Zhang, and Xuan Shang
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Ankyrins ,China ,Phenotype ,Asian People ,RNA Splicing ,Mutation ,Molecular Medicine ,Humans ,Mutant Proteins ,Molecular Biology - Abstract
Hereditary spherocytosis (HS) is a common hematological genetic disorder that results in anemia, jaundice and splenomegaly. It is caused by mutations in the ANK1, SPTA, SPTB, SLC4A1 and EPB42 genes, which encode red blood cell membrane and skeletal proteins. Patients show high heterogeneity in phenotype and genotype and the genotype-phenotype correlation still requires clarification. Here, a novel splicing mutation (ANK1: c.4391-2 AC) was identified by whole-exome sequencing (WES) and Sanger sequencing in a Chinese boy who exhibited a moderately severe HS phenotype. However, his father exhibited a mild phenotype, despite carrying the same HS-causing mutation. The function of the mutant ANK1 protein was analyzed by both bioinformatics and experimental analysis. The mutant protein (p.N1463Kfs*4) showed a different 3D-structure and altered subcellular localization, when compared with the wild-type ANK1 protein. These changes disrupted the normal cell membrane structure and resulted in spheroidized red blood cells. Amplification of cDNA from the son and his father revealed a difference in expression of the abnormal transcript produced by the splicing mutation. We proposed that the lower expression of the mutant allele may have contributed to the relatively mild symptoms of the father. Our study verified ANK1 c. c.4391-2 AC as a novel pathogenic mutation that causes HS. We have also provided new insights into the interpretation of phenotypic variability within families, which could greatly improve the clinical diagnosis and genetic counseling of HS.
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- 2022
177. Zanubrutinib in patients with previously treated B-cell malignancies intolerant of previous Bruton tyrosine kinase inhibitors in the USA: a phase 2, open-label, single-arm study
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Mazyar Shadman, Ian W Flinn, Moshe Y Levy, Ryan F Porter, John M Burke, Syed F Zafar, Jamal Misleh, Edwin C Kingsley, Habte A Yimer, Benjamin Freeman, Subramanya S Rao, Arvind Chaudhry, Praveen K Tumula, Mitul D Gandhi, Sudhir Manda, Dih-Yih Chen, Kunthel By, Linlin Xu, Ye Liu, Rocco Crescenzo, Adam Idoine, Xiaoping Zhang, Aileen Cohen, Jane Huang, and Jeff P Sharman
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Hematology - Abstract
We hypothesised that zanubrutinib, a highly selective next-generation Bruton tyrosine kinase (BTK) inhibitor, would be a safe and active treatment for patients intolerant of ibrutinib, acalabrutinib, or both. We aimed to assess whether zanubrutinib would prolong treatment duration by minimising treatment-related toxicities and discontinuations in patients with previously treated B-cell malignancies.This ongoing, phase 2, multicentre, open-label, single-arm study was done in 20 centres in the USA. Patients aged 18 or older with previously treated B-cell malignancies (chronic lymphocytic leukaemia, small lymphocytic lymphoma, mantle cell lymphoma, Waldenström macroglobulinaemia, or marginal zone lymphoma) who became intolerant of ibrutinib, acalabrutinib, or both, were orally administered zanubrutinib 160 mg twice daily or 320 mg once daily per investigator. The primary endpoint was recurrence and change in severity of ibrutinib or acalabrutinib intolerance events based on investigator-assessed adverse events. Secondary endpoints were investigator-assessed overall response rate; duration of response; disease control rate; and progression-free survival. Analyses included all patients who received any dose of the study drug. This study is registered with ClinicalTrials.gov, NCT04116437.Between Oct 14, 2019, and Sept 8, 2021, 67 patients (36 [54%] men and 31 [46%] women) who were intolerant of ibrutinib (n=57; cohort 1) or of acalabrutinib or acalabrutinib and ibrutinib (n=10; cohort 2) were enrolled. 63 (94%) patients were White, one (2%) had multiple ethnicities, and three (5%) had unreported or unknown ethnicity. Most intolerance events (81 [70%] of 115 for ibrutinib; 15 [83%] of 18 for acalabrutinib) did not recur with zanubrutinib. Of the recurring events, seven (21%) of 34 ibrutinib intolerance events and two (67%) of three acalabrutinib intolerance events recurred at the same severity with zanubrutinib; 27 (79%) ibrutinib intolerance events and one (33%) acalabrutinib intolerance event recurred at a lower severity with zanubrutinib. No events recurred at higher severity. No grade 4 intolerance events recurred. 64 (96%) of 67 patients had one or more adverse events with zanubrutinib; the most common adverse events were contusion (in 15 [22%] of 67 patients), fatigue (14 [21%]), myalgia (ten [15%]), arthralgia (nine [13%]), and diarrhoea (nine [13%]). Atrial fibrillation occurred in three (4%) patients (all grade 2). Eight (12%) of 67 patients had serious adverse events (anaemia, atrial fibrillation, bronchitis, COVID-19, COVID-19 pneumonia, febrile neutropenia, salmonella gastroenteritis, transfusion reaction, trigeminal nerve disorder, and urinary tract infection). No treatment-related deaths occurred. The median follow-up time was 12·0 months (IQR 8·2-15·6). Among the 64 efficacy-evaluable patients, disease control rate was 93·8% (60; 95% CI 84·8-98·3) and overall response rate was 64·1% (41; 95% CI 51·1-75·7). The median duration of response was not reached; the 12-month event-free duration of response rate was 95·0% (95% CI 69·5-99·3). Similarly, median progression-free survival was not reached; 18-month progression-free survival was 83·8% (95% CI 62·6-93·6).Patients intolerant of previous BTK inhibitors have limited treatment options. These results suggest that zanubrutinib, a safe and viable treatment for patients with B-cell malignancies, might fill that unmet need for those who exhibit intolerance to ibrutinib or acalabrutinib.BeiGene.
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- 2022
178. Discrepancies in glycemic metrics derived from different continuous glucose monitoring systems in adult patients with type 1 diabetes mellitus
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Yongwen Zhou, Xiaodong Mai, Hongrong Deng, Daizhi Yang, Mao Zheng, Bin Huang, Linlin Xu, Jianping Weng, Wen Xu, and Jinhua Yan
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Adult ,Blood Glucose ,Glycated Hemoglobin ,Diabetes Mellitus, Type 1 ,Endocrinology, Diabetes and Metabolism ,Blood Glucose Self-Monitoring ,Humans ,Hypoglycemic Agents ,Hypoglycemia - Abstract
Continuous glucose monitoring systems have been widely used but discrepancies among various brands of devices are rarely discussed. This study aimed to explore differences in glycemic metrics between FreeStyle Libre (FSL) and iPro2 among adults with type 1 diabetes mellitus (T1DM).Participants with T1DM and glycosylated hemoglobin of 7%-10% were included and wore FSL and iPro2 for 2 weeks simultaneously. Datasets collected on the insertion and detachment day, and those with insufficient quantity (90%) were excluded. Agreements of measurement accuracy and glycemic metrics were evaluated.A total of 40 498 paired data were included. Compared with the values from FSL, significantly higher median value was observed in iPro2 (147.6 [106.2, 192.6] vs. 144.0 [100.8, 192.6] mg/dl, p 0.001) and the largest discordance was observed in hypoglycemic range (median absolute relative difference with iPro2 as reference value: 25.8% [10.8%, 42.1%]). Furthermore, significant differences in glycemic metrics between iPro2 and FSL were also observed in time in range (TIR) 70-180 mg/dl (TIR, 62.8 ± 12.4% vs. 58.8 ± 12.3%, p = 0.004), time spent below 70 mg/dl (4.4 [1.8, 10.9]% vs. 7.2 [5.4, 13.3]%, p 0.001), time spent below 54 mg/dl (0.9 [0.3, 4.0]% vs. 2.6 [1.3, 5.6]%, p = 0.011), and coefficient of variation (CV, 38.7 ± 8.5% vs. 40.9 ± 9.3%, p = 0.017).During 14 days of use, FSL and iPro2 provided different estimations on TIR, CV, and hypoglycemia-related parameters, which needs to be considered when making clinical decisions and clinical trial designs.背景: 连续血糖监测系统已被广泛使用,但不同品牌的设备之间的差异很少被讨论。本研究旨在探讨成人1型糖尿病(T1DM)患者中Freestyle Libre(FSL)和iPro2在血糖指标上的差异。 方法: 选择T1DM和糖化血红蛋白(HbA1c)为7%~10%的受试者,同时使用FSL和iPRO 2两周。排除了在植入和取出当天收集的数据集,以及质量不够高(90%)的数据集。对测量准确度和血糖指标的一致性进行评估。 结果: 共纳入40498对数据。与FSL相比,iPro2的中位数显著升高(147.6[106.2,192.6]vs 144.0[100.8,192.6]mg/dL,P0.001),其中不一致性最高的是低血糖范围(以iPro2为参考值的绝对差值中位数:25.8% [10.8%,42.1%])。此外,iPro2和FSL在70-180 mg/dL达标时间(TIR)内的血糖指标也有显著差异(TIR,62.8±12.4vs.58.8±12.3%,P=0.004),在70 mg/dL以下的时间(4.4 [1.8, 10.9]% vs.7.2[5.4,13.3]%,P0.001]),在54 mg/dL以下的时间(0.9[0.3,4.0]% vs.2.6[1.3,5.6]%, p=0.011),变异系数(CV, 38.7±8.5% vs.40.9±9.3%,P=0.017)。 结论: 在使用的14天中,FSL和iPro2对TIR、CV和低血糖相关参数提供了不同的估计,在临床决策和临床试验设计时需要考虑这些因素。.
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- 2022
179. A Comparative Study of Deep Learning Approaches to Rooftop Detection in Aerial Images
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Hongjie He, Jonathan Li, Lingfei Ma, Yuwei Cai, Sarah Narges Fatholahi, Ke Yang, and Linlin Xu
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Computer science ,business.industry ,Deep learning ,General Earth and Planetary Sciences ,Deep neural networks ,Pattern recognition ,Artificial intelligence ,business - Abstract
This paper investigates the deep neural networks for rapid and accurate detection of building rooftops in aerial orthoimages. The networks were trained using the manually labeled rooftop vector dat...
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- 2021
180. An efficient construction of <scp>CN</scp> bond under catalyst‐free and room temperature conditions
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Lei Dai, Linlin Xu, Liangce Rong, Yingying Xia, Jing Liu, Jinpeng Zhang, Lan Xu, and Yuqian Ge
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chemistry.chemical_compound ,Chemistry ,Tetrahydroisoquinoline ,Bond ,Organic Chemistry ,Indoline ,Polymer chemistry ,Catalysis - Published
- 2021
181. Reconsidering the Suitability Assessment Method for Glacier Tourism: A Case Study from Tibet, China
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Hu, Yu, primary, Linlin, Xu, additional, and Limin, Liu, additional
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- 2022
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182. Allosteric synthetic antibody (Allo-SyAb) for improved cancer immunotherapy
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Jiajing Chen, Mengchen Xu, Yongxin Zhang, Linlin Xu, Shuyue Zhao, Yingli An, Rujiang Ma, Yang Liu, Feihe Ma, and Linqi Shi
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General Chemical Engineering ,Environmental Chemistry ,General Chemistry ,Industrial and Manufacturing Engineering - Published
- 2023
183. Positive feedback of SuFu negating protein 1 on Hedgehog signaling promotes colorectal tumor growth
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Guohui Hu, Linlin Xu, Hai Rao, Yuan Liu, Hua Lu, Libin Deng, Ye-Guang Chen, Quqin Lu, Chao Shi, Yao Wang, Aidi Huang, Zhengwei Yan, Minzhang Cheng, Shiwen Luo, and Shaopeng Zeng
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Male ,Cancer Research ,Pyridines ,Regulator ,law.invention ,Ubiquitin ,law ,Anilides ,Tissue homeostasis ,Feedback, Physiological ,Mice, Knockout ,Mice, Inbred BALB C ,lcsh:Cytology ,Nuclear Proteins ,Middle Aged ,Hedgehog signaling pathway ,Tumor Burden ,Ubiquitin ligase ,Cell biology ,Gene Expression Regulation, Neoplastic ,Female ,Colorectal Neoplasms ,HT29 Cells ,Signal Transduction ,Proteasome Endopeptidase Complex ,Ubiquitin-Protein Ligases ,Immunology ,Mice, Nude ,Antineoplastic Agents ,Zinc Finger Protein Gli2 ,Biology ,Article ,Cellular and Molecular Neuroscience ,Animals ,Humans ,Hedgehog Proteins ,lcsh:QH573-671 ,Hedgehog ,Cell Proliferation ,Cell growth ,Ubiquitination ,Growth factor signalling ,Oncogenes ,Cell Biology ,HCT116 Cells ,Repressor Proteins ,HEK293 Cells ,Drug Resistance, Neoplasm ,Proteolysis ,biology.protein ,Suppressor ,Caco-2 Cells - Abstract
Hedgehog (Hh) signaling plays a critical role in embryogenesis and tissue homeostasis, and its deregulation has been associated with tumor growth. The tumor suppressor SuFu inhibits Hh signaling by preventing the nuclear translocation of Gli and suppressing cell proliferation. Regulation of SuFu activity and stability is key to controlling Hh signaling. Here, we unveil SuFu Negating Protein 1 (SNEP1) as a novel Hh target, that enhances the ubiquitination and proteasomal degradation of SuFu and thus promotes Hh signaling. We further show that the E3 ubiquitin ligase LNX1 plays a critical role in the SNEP1-mediated degradation of SuFu. Accordingly, SNEP1 promotes colorectal cancer (CRC) cell proliferation and tumor growth. High levels of SNEP1 are detected in CRC tissues and are well correlated with poor prognosis in CRC patients. Moreover, SNEP1 overexpression reduces sensitivity to anti-Hh inhibitor in CRC cells. Altogether, our findings demonstrate that SNEP1 acts as a novel feedback regulator of Hh signaling by destabilizing SuFu and promoting tumor growth and anti-Hh resistance.
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- 2021
184. Effect of orexin‐A on mitochondrial biogenesis, mitophagy and structure in HEK293‐APPSWE cell model of Alzheimer's disease
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Jieke Yan, Maoyu Li, ChaoYuan Song, Zhengyu Zhu, Zhaohong Xie, DeYan Cao, YuZhen Wang, and Linlin Xu
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0301 basic medicine ,Physiology ,PINK1 ,Parkin ,Mitochondrial Proteins ,03 medical and health sciences ,0302 clinical medicine ,Alzheimer Disease ,Physiology (medical) ,Mitophagy ,Humans ,NRF1 ,Pharmacology ,Orexins ,Amyloid beta-Peptides ,Organelle Biogenesis ,Chemistry ,Kinase ,HEK 293 cells ,TFAM ,Mitochondria ,Cell biology ,DNA-Binding Proteins ,HEK293 Cells ,030104 developmental biology ,Mitochondrial biogenesis ,030220 oncology & carcinogenesis ,Transcription Factors - Abstract
Mitochondrial dysfunction plays a key role in the pathogenesis and progression of Alzheimer's Disease (AD). Our previous studies showed that over expression of AD-associated mutant β-amyloid precursor protein (APP) led to abnormalities of mitochondrial biogenesis and mitophagy, leading to mitochondrial dysfunction. However, the mechanism remains unclear. In this study, we investigated the effect of orexin-A on mitochondrial biogenesis, mitophagy and mitochondrial structure in overexpression of AD-associated mutant APP cells. We used 20E2 cells as the AD cell model. 20E2 cells were treated with orexin-A (50, 100 nmol/L). The effect of different concentrations of orexin-A on cell activity was detected by MTT. As compared with the non-treated 20E2 cells, orexin-A-treated 20E2 cells showed increased expression of APP, decreased cell viability and decreased adenosine triphosphate (ATP) level, decreased levels of regulatory proteins of mitochondrial biogenesis (peroxisome proliferator-activated receptor gamma coactivator 1-alpha [PGC-1α], nuclear respiratory factor 1/2 [NRF1/2], mitochondrial transcription factor A [TFAM]), increased levels of regulatory proteins of mitophagy (Parkin, PTEN-induced putative kinase 1 [PINK1], microtubule-associated protein light chain 3 II/I [LC3-II/LC3-I]) and decreased p62 level, with damaged mitochondrial structure. Orexin-A may reduce mitochondrial biogenesis, enhance mitophagy and damage mitochondrial structure in AD.
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- 2021
185. Deep Residual Transform for Multi-scale Image Decomposition
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Alexander Wong, Yuhao Chen, Yuan Fang, Yifan Wu, and Linlin Xu
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Transformation (function) ,business.industry ,Computer science ,Decomposition (computer science) ,Wavelet transform ,Pattern recognition ,Artificial intelligence ,Granularity ,Representation (mathematics) ,business ,Residual ,Image (mathematics) ,Image compression - Abstract
Multi-scale image decomposition (MID) is a fundamental task in computer vision and image processing that involves the transformation of an image into a hierarchical representation comprising of different levels of visual granularity from coarse structures to fine details. A well-engineered MID disentangles the image signal into meaningful components which can be used in a variety of applications such as image denoising, image compression, and object classification. Traditional MID approaches such as wavelet transforms tackle the problem through carefully designed basis functions under rigid decomposition structure assumptions. However, as the information distribution varies from one type of image content to another, rigid decomposition assumptions lead to inefficiently representation, i.e., some scales can contain little to no information. To address this issue, we present Deep Residual Transform (DRT), a data-driven MID strategy where the input signal is transformed into a hierarchy of non-linear representations at different scales, with each representation being independently learned as the representational residual of previous scales at a user-controlled detail level. As such, the proposed DRT progressively disentangles scale information from the original signal by sequentially learning residual representations. The decomposition flexibility of this approach allows for highly tailored representations cater to specific types of image content, and results in greater representational efficiency and compactness. In this study, we realize the proposed transform by leveraging a hierarchy of sequentially trained autoencoders. To explore the efficacy of the proposed DRT, we leverage two datasets comprising of very different types of image content: 1) CelebFaces and 2) Cityscapes. Experimental results show that the proposed DRT achieved highly efficient information decomposition on both datasets amid their very different visual granularity characteristics.
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- 2021
186. A Depthwise Separable Fully Convolutional ResNet With ConvCRF for Semisupervised Hyperspectral Image Classification
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Linlin Xu, Fang Wang, Kui Li, Ye Chen, Yuxian Wang, and Qian Wei
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Conditional random field ,Atmospheric Science ,fully convolutional network ,business.industry ,Computer science ,QC801-809 ,Feature extraction ,Geophysics. Cosmic physics ,Hyperspectral imaging ,Pattern recognition ,Overfitting ,Ocean engineering ,depthwise separable convolution ,Kernel (image processing) ,Discriminative model ,hyperspectral image (HSI) classification ,Region growing ,region growing (RGW) ,Convolutional conditional random fields (ConvCRF) ,Artificial intelligence ,Computers in Earth Sciences ,business ,Feature learning ,residual network (ResNet) ,TC1501-1800 - Abstract
Hyperspectral images classification relies on the accurate and efficient extraction of discriminative features, detail preservation, and efficient learning with limited training samples. This article, therefore, presents an advanced neural network architecture combined with convolutional conditional random fields (ConvCRF) and region growing (RGW) approaches to address these key issues. First, a depthwise separable fully convolutional residual network (DFRes) is proposed for efficient feature learning, where a fully convolutional operation ensures a larger field of view, and residual learning and depthwise separable convolution can mitigate the problem of vanishing gradient and overfitting. Second, because the collection of ground-truth labels is usually difficult, the proposed architecture integrates the RGW method to effectively overcome the problem of limited training samples. Third, ConvCRF is used to preserve the image details for fine-grained predictions. Finally, the abovementioned key components are coherently integrated into the new semisupervised framework, i.e., DFRes with conditional random fields and RGW. Experimental results on three hyperspectral datasets demonstrate that the proposed approach outperforms other state-of-the-art methods.
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- 2021
187. Unsupervised Bayesian Subpixel Mapping of Hyperspectral Imagery Based on Band-Weighted Discrete Spectral Mixture Model and Markov Random Field
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Alexander Wong, Yuan Fang, Junhuan Peng, Yujia Chen, David A. Clausi, Wenfu Yang, and Linlin Xu
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Endmember ,Markov random field ,010504 meteorology & atmospheric sciences ,Computer science ,business.industry ,Bayesian probability ,0211 other engineering and technologies ,Initialization ,Hyperspectral imaging ,Markov process ,Pattern recognition ,02 engineering and technology ,Geotechnical Engineering and Engineering Geology ,Mixture model ,01 natural sciences ,Subpixel rendering ,symbols.namesake ,symbols ,Artificial intelligence ,Electrical and Electronic Engineering ,business ,021101 geological & geomatics engineering ,0105 earth and related environmental sciences - Abstract
Although accurate training and initialization information is difficult to acquire, unsupervised hyperspectral subpixel mapping (SPM) without relying on this predefined information is an insufficiently addressed research issue. This letter presents a novel Bayesian approach for unsupervised SPM of hyperspectral imagery (HSI) based on the Markov random field (MRF) and a band-weighted discrete spectral mixture model (BDSMM), with the following key characteristics. First, this is an unsupervised approach that allows adjustment of abundance and endmember information adaptively for less relying on algorithm initialization. Second, this approach consists of the BDSMM for accommodating the noise heterogeneity and the hidden label field of subpixels in HSI. The BDSMM also integrates SPM into the spectral mixture analysis and allows enhanced SPM by fully exploring the endmember-abundance patterns in HSI. Third, the MRF and BDSMM are integrated into a Bayesian framework to use both the spatial and spectral information efficiently, and an expectation-maximization (EM) approach is designed to solve the model by iteratively estimating the endmembers and the label field. Experiments on both simulated and real HSI demonstrate that the proposed algorithm can yield better performance than traditional methods.
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- 2021
188. Retrieval of ice/water observations from synthetic aperture radar imagery for use in lake ice data assimilation
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Homa Kheyrollah Pour, Linlin Xu, and K. Andrea Scott
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0106 biological sciences ,Synthetic aperture radar ,Ecology ,010604 marine biology & hydrobiology ,010501 environmental sciences ,Aquatic Science ,01 natural sciences ,Convolutional neural network ,Ice water ,Data assimilation ,Lake ice ,Satellite imagery ,Sea ice concentration ,Ecology, Evolution, Behavior and Systematics ,Geology ,Synthetic aperture radar imagery ,0105 earth and related environmental sciences ,Remote sensing - Abstract
High-resolution lake ice/water observations retrieved from satellite imagery through efficient, automated methods can provide critical information to lake ice forecasting systems. Synthetic aperture radar (SAR) data is well-suited to this purpose due to its high spatial resolution (approximately 50 m). With recent increases in the volume of SAR data available, the development of automated retrieval methods for these data is a priority for operational centres. However, automated retrieval of ice/water data from SAR imagery is difficult, due to ambiguity in ice and open water signatures, both in terms of image tone and in terms of parameterized texture features extracted from these images. Convolutional neural networks (CNNs) can learn features from imagery in an automated manner, and have been found effective in previous studies on sea ice concentration estimation from SAR. In this study the use of CNNs to retrieve ice/water observations from dual-polarized SAR imagery of two of the Laurentian Great Lakes, Lake Erie and Lake Ontario, is investigated. For data assimilation, it is crucial that the retrieved observations are of high quality. To this end, quality control measures based on the uncertainty of the CNN output to eliminate incorrect retrievals are discussed and demonstrated. The quality control measures are found to be effective in both dual-polarized and single-polarized retrievals. The ability of the CNN to downscale the coarse resolution training labels is demonstrated qualitatively.
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- 2020
189. ARL13B promotes angiogenesis and glioma growth by activating VEGFA-VEGFR2 signaling
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Limin Chen, Xinsheng Xie, Tiantian Wang, Linlin Xu, Zhenyu Zhai, Haibin Wu, Libin Deng, Quqin Lu, Zhengjun Chen, Xiao Yang, Hua Lu, Ye-Guang Chen, and Shiwen Luo
- Subjects
Cancer Research ,Oncology ,Neurology (clinical) - Abstract
Background Tumor angiogenesis is essential for solid tumor progression, invasion and metastasis. The aim of this study was to identify potential signaling pathways involved in tumor angiogenesis. Methods Genetically engineered mouse models were used to investigate the effects of endothelial ARL13B(ADP-ribosylation factor-like GTPase 13B) over-expression and deficiency on retinal and cerebral vasculature. An intracranially transplanted glioma model and a subcutaneously implanted melanoma model were employed to examine the effects of ARL13B on tumor growth and angiogenesis. Immunohistochemistry was used to measure ARL13B in glioma tissues, and scRNA-seq was used to analyze glioma and endothelial ARL13B expression. GST-fusion protein-protein interaction and co-immunoprecipitation assays were used to determine the ARL13B-VEGFR2 interaction. Immunobloting, qPCR, dual-luciferase reporter assay and functional experiments were performed to evaluate the effects of ARL13B on VEGFR2 activation. Results Endothelial ARL13B regulated vascular development of both the retina and brain in mice. Also, ARL13B in endothelial cells regulated the growth of intracranially transplanted glioma cells and subcutaneously implanted melanoma cells by controlling tumor angiogenesis. Interestingly, this effect was attributed to ARL13B interaction with VEGFR2, through which ARL13B regulated the membrane and ciliary localization of VEGFR2 and consequently activated its downstream signaling in endothelial cells. Consistent with its oncogenic role, ARL13B was highly expressed in human gliomas, which was well correlated with the poor prognosis of glioma patients. Remarkably, ARL13B, transcriptionally regulated by ZEB1, enhanced the expression of VEGFA by activating Hedgehog signaling in glioma cells. Conclusions ARL13B promotes angiogenesis and tumor growth by activating VEGFA-VEGFR2 signaling. Thus, targeting ARL13B might serve as a potential approach for developing an anti-glioma or anti-melanoma therapy.
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- 2022
190. Academic identities research: mapping the field’s theoretical frameworks
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Linlin Xu, Mark Barrow, and Barbara Grant
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media_common.quotation_subject ,Field (Bourdieu) ,05 social sciences ,Subject (philosophy) ,050301 education ,Identity (social science) ,Education ,Epistemology ,0502 economics and business ,Sociology ,Ideology ,0503 education ,050203 business & management ,media_common ,Meaning (linguistics) - Abstract
For several decades, Western universities have been subject to wide-ranging structural, financial and ideological changes. These changes have problematised afresh the meaning of academic identity a...
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- 2020
191. Moving between fantasies, fallacies and realities: students’ perceptions of supervisors’ roles in doctoral publishing
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Linlin Xu
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business.industry ,media_common.quotation_subject ,05 social sciences ,050301 education ,Publish or perish ,Education ,Publishing ,Perception ,0502 economics and business ,Pedagogy ,Sociology ,Relation (history of concept) ,business ,0503 education ,050203 business & management ,media_common - Abstract
New to the academy’s ‘publish or perish’ game, doctoral students hold varied expectations of supervisors in relation to their publishing endeavours. These expectations can be unrealistic or contrad...
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- 2020
192. Combined Nonlocal Spatial Information and Spatial Group Sparsity in NMF for Hyperspectral Unmixing
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Longshan Yang, Junhuan Peng, Bowen Yu, Huiwei Su, Yuebin Wang, and Linlin Xu
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Spatial contextual awareness ,Endmember ,business.industry ,0211 other engineering and technologies ,Hyperspectral imaging ,Pattern recognition ,02 engineering and technology ,Geotechnical Engineering and Engineering Geology ,Image (mathematics) ,Non-negative matrix factorization ,Statistics::Machine Learning ,Computer Science::Computer Vision and Pattern Recognition ,Segmentation ,Artificial intelligence ,Electrical and Electronic Engineering ,Cluster analysis ,business ,Spatial analysis ,021101 geological & geomatics engineering - Abstract
Unmixing is a key but difficult issue in hyperspectral image (HSI) processing, and many unmixing methods have been proposed. However, an effective introduction of the spatial context in unmixing remains a challenge but is a necessary condition for many real scene applications. In this letter, a new nonnegative matrix factorization (NMF) method that combines nonlocal spatial information with spatial group sparsity (NLNMF) is proposed. Each superpixel generated by the simple linear iterative clustering (SLIC) segmentation method was used as a group. The search region of the nonlocal means method was adaptively set using a superpixel label from each spectrum to find the similar spectra to reestimate the reference spectrum. Additionally, the sparsity of spectra in the same superpixel was considered to be the same. Experiment results for synthetic and real HSI showed that the proposed method not only can more accurately estimate the endmember and abundance compared with other unmixing methods but also has good performance regarding antinoise.
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- 2020
193. Di-2-ethylhexyl phthalate (DEHP) induces apoptosis of mouse HT22 hippocampal neuronal cells via oxidative stress
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Xingen Zhu, Linlin Xu, Wei Tu, and Weifeng Li
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endocrine system ,Cell Survival ,Health, Toxicology and Mutagenesis ,Apoptosis ,010501 environmental sciences ,Toxicology ,medicine.disease_cause ,Hippocampus ,01 natural sciences ,Cell Line ,Superoxide dismutase ,Mice ,03 medical and health sciences ,chemistry.chemical_compound ,Diethylhexyl Phthalate ,medicine ,Animals ,Viability assay ,030304 developmental biology ,0105 earth and related environmental sciences ,Neurons ,chemistry.chemical_classification ,Glutathione Peroxidase ,0303 health sciences ,Dose-Response Relationship, Drug ,L-Lactate Dehydrogenase ,biology ,Superoxide Dismutase ,Glutathione peroxidase ,Public Health, Environmental and Occupational Health ,Phthalate ,Glutathione ,Malondialdehyde ,Cell biology ,Oxidative Stress ,Proto-Oncogene Proteins c-bcl-2 ,chemistry ,Caspases ,biology.protein ,Oxidative stress - Abstract
Di-2-ethylhexyl phthalate (DEHP) has been widely used as a plasticizer in industry and can affect memory; however, the underlying mechanism remains unclear. In the present study, mouse HT22 cells, an immortalized hippocampal neuronal cell line, was utilized as an in vitro model. We showed that DEHP dramatically inhibited cell viability and increased lactate dehydrogenase (LDH) release from the cells in a dose-dependent manner, suggesting that DEHP could cause cytotoxicity of mouse HT22 cells. The protein levels of cleaved Caspase-8, cleaved Caspase-3, and Bax markedly increased in the DEHP-treated cells, whereas there was a significant decrease in the Bcl-2 protein level, implying that DEHP could induce apoptosis of mouse HT22 cells. DEHP exposure significantly increased the content of malondialdehyde, whereas it markedly decreased the level of glutathione and the activities of glutathione peroxidase and superoxide dismutase, suggesting that DEHP induced oxidative stress of the cells. Compared with the DEHP-treated group, the inhibition of cell viability and the release of LDH were rescued in the N-acetyl-l-cysteine plus DEHP group. Furthermore, inhibition of oxidative stress could rescue the induction of apoptosis by DEHP. Collectively, our results indicated that DEHP could induce apoptosis of mouse HT22 cells via oxidative stress.
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- 2020
194. Optimization of microbiological plastic film test plate conditions for rapid detection of antibiotics in milk
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Linlin Xu, Ping Chen, Moeketsi Ntakatsane, Jingsheng Liu, Katleho Senoko, and Poloko Mosebi
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Microbiological culture ,biology ,medicine.drug_class ,Tetracycline ,Chemistry ,General Chemical Engineering ,010401 analytical chemistry ,Antibiotics ,04 agricultural and veterinary sciences ,biology.organism_classification ,040401 food science ,01 natural sciences ,Industrial and Manufacturing Engineering ,0104 chemical sciences ,Coliform bacteria ,Penicillin ,Minimum inhibitory concentration ,0404 agricultural biotechnology ,Sulfadiazine ,medicine ,Food science ,Safety, Risk, Reliability and Quality ,Micrococcus luteus ,Food Science ,medicine.drug - Abstract
Food safety and quality are issues of great concern to food producers and consumers. Key challenges towards achieving these include availability of rapid, user-friendly, economic and reliable techniques to detect problems such as antibiotic residues. Therefore, the present study was conducted to evaluate performance of plastic film test plate (PFTP) as influenced by antibiotic type, test bacterium, inoculum volume and concentration. Comparison was made to the microtiter test plate (MTP) and the National Standard method (SN/T 3979-2014). For this, antibiotic susceptibility testing was conducted on four bacterial types (Micrococcus luteus, Streptococcus thermophillus suspensions, Staphylococcus aureus and Coliform bacteria) against three antibiotics (penicillin G, sulfadiazine and tetracycline). Results showed high susceptibility of Micrococcus luteus to penicillin G with minimum inhibitory concentration of 3 µg L−1 and 1 µg L−1 via PFTP and MTP respectively. Optimum performance was realized at bacterial concentration of 104 CFU ml−1 with detection limit of 1 µg L−1, sensitivity and predictive positive value (PPV) of 81–83% and 97–100% respectively. Detection time was recorded as 6 and 9 h for MTP and PFTP respectively compared to the 18–24 h of the National Standard method (SN/T 3979–2014). The microbiological plastic film test plate under optimized bacterial culture conditions demonstrated tremendous potential for rapid and reliable detection of antibiotics in milk.
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- 2020
195. Nonlocal Band-Weighted Iterative Spectral Mixture Model for Hyperspectral Imagery Denoising
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Alexander Wong, Longshan Yang, Junhuan Peng, David A. Clausi, Linlin Xu, and Yongze Song
- Subjects
Mahalanobis distance ,Pixel ,Noise measurement ,Computer science ,Noise (signal processing) ,business.industry ,Noise reduction ,0211 other engineering and technologies ,Hyperspectral imaging ,Pattern recognition ,02 engineering and technology ,Mixture model ,Spectral line ,Principal component analysis ,General Earth and Planetary Sciences ,Artificial intelligence ,Electrical and Electronic Engineering ,business ,Image restoration ,021101 geological & geomatics engineering - Abstract
Although efficient hyperspectral image (HSI) denoising relies on complete and accurate description and modeling the spatial–spectral signal in HSI, the current approaches do not fully account for key characteristics of HSI, i.e., the mixed spectra effect, the spatial nonstationarity effect, and noise variance heterogeneity effect. To address this issue, this article presents a linear spectral mixture model with nonlocal means constraint (LSMM-NLMC), with the following advantages. First, LSMM-NLMC can effectively learn the signal in mixed pixels in HSI by estimating clean endmembers and abundances for image restoration. Second, LSMM-NLMC can efficiently address nonstationary spatial correlation effect by imposing NLMC on the latent scene signal. Last, LSMM-NLMC provides accurate noise characterization by accounting for noise variance heterogeneity effect using a band-dependent noise model and a band-weighted Mahalanobis distance for similarity measurement. A novel optimization method based on the expectation–maximization (EM) algorithm and the purified means approach is used to efficiently solve the resulting maximum a posterior (MAP) problem. The experiments on both simulated and real HSI data sets demonstrate that the visual quality and denoising accuracy are significantly improved by the proposed LSMM-NLMC compared with previous methods.
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- 2020
196. Aptamer-Functionalized Gold Nanostars for on-Demand Delivery of Anticancer Therapeutics
- Author
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Lei Wu, Lihua Lin, Pei Zhao, Dalin Wu, Linlin Xu, Guoyi Yu, and Jun Yue
- Subjects
Oligonucleotide ,Chemistry ,Aptamer ,Biochemistry (medical) ,Photothermal effect ,technology, industry, and agriculture ,Biomedical Engineering ,Nanotechnology ,General Chemistry ,Receptor-mediated endocytosis ,Biomaterials ,On demand ,parasitic diseases ,Cancer cell ,Drug release - Abstract
Gold nanostars (AuNS) are promising carriers for targeted delivery of therapeutic oligonucleotides, but their potential in fabricating an on-demand drug release system in a facile and robust way remains to be explored. In this paper, we used a model aptamer (HApt), acting not only as a target ligand but also as a natural thermal-responsive material, to decorate AuNS. The prepared gold nanoconstruct, HApt@AuNS, displayed stoichiometric loading capacity of the anthracycline drug doxorubicin (Dox). The on-demand drug release was realized by illuminating nanoconstructs with near-infrared (NIR) light. Furthermore, a higher degree of Dox release from the nanoconstructs was achieved in an acidic environment, compared to neutral conditions. The
- Published
- 2020
197. Comparative Analysis of Gait Speed Estimation Using Wideband and Narrowband Radars, Thermal Camera, and Motion Tracking Suit Technologies
- Author
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Amir-Hossein Karimi, Alexander Wong, Doojin Lee, Avery Ma, Jing Wei, George Shaker, A. Thatte, A. S. Rocha, Jennifer Boger, Plinio P. Morita, B. Fong, and Linlin Xu
- Subjects
Computer science ,Bandwidth (signal processing) ,020206 networking & telecommunications ,020207 software engineering ,Health Informatics ,02 engineering and technology ,Computer Science Applications ,law.invention ,Gait speed ,Preferred walking speed ,Narrowband ,Match moving ,Artificial Intelligence ,law ,Thermal ,0202 electrical engineering, electronic engineering, information engineering ,Radar ,Wideband ,Simulation ,Information Systems - Abstract
Research has shown that cognitive and physical functioning of older adults can be reflected in indicators such as walking speed. While changes in cognition, mobility, or health cause changes in gait speed, often gradual variations in walking speed go undetected until severe problems arise. Discrete clinical assessments during clinical consultations often fail to detect changes in day-to-day walking speeds and do not reflect walking speeds in everyday environments, where most of the mobility issues happen. In this paper, we compare four walking speed measurement technologies to a GAITRite mat (gold standard): (1) an ultra wideband radar (covering the band from 3.3 GHz to 10 GHz), (2) a narrow band 24-GHz radar (with a bandwidth of 250 MHz), (3) a perception Neuron Motion Tracking suit, and (4) a thermal camera. Data were collected in parallel using all sensors at the same time for 10 healthy adults for normal and slow walking paces. A comparison of the sensors indicates better performance at lower gait speeds, with offsets (when compared to GAITRite) between 0.1 and 20% for the ultra wideband radar, 1.9 and 17% for the narrowband radar, 0.1 and 38% for the thermal camera, and 1.7 and 38% for the suit. This paper supports the potential of unobtrusive radar-based sensors and thermal camera technologies for ambient autonomous gait speed monitoring for contextual, privacy-preserving monitoring of participants in the community.
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- 2020
198. Fabrication of penicillin G portable microbiological test plate for on-farm antibiotic residues in milk
- Author
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Linlin Xu, Puleng Agathah Matebesi, Jingsheng Liu, Dong Na, Ping Chen, George Adoko, Moeketsi Ntakatsane, and Poloko Mosebi
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Guar gum ,medicine.drug_class ,Chemistry ,General Chemical Engineering ,010401 analytical chemistry ,Antibiotics ,Plastic film ,04 agricultural and veterinary sciences ,040401 food science ,01 natural sciences ,Industrial and Manufacturing Engineering ,0104 chemical sciences ,Penicillin ,Agar plate ,0404 agricultural biotechnology ,medicine ,Food science ,Water diffusion ,Agar diffusion test ,Konjac glucomannan ,Safety, Risk, Reliability and Quality ,Food Science ,medicine.drug - Abstract
Antibiotic residues in animal-derived food products such as milk pose a potential health risk to consumers. A portable antimicrobial screening test plate was fabricated particularly for on-farm testing of milk. A cold-water soluble compound gelling agent composed of guar gum (GG) and konjac glucomannan (KG) was prepared and its properties were optimized for enhancing performance of the test plate. A ratio of 4:6 (GG:KG) showed improved gel strength, cohesiveness, transmittance, and water diffusion of the compound gel. Microbial colony number and size were also increased. The test plate displayed a minimum inhibition concentration of 4 µg/L penicillin G and clearer zone of inhibition. Detection time was also significantly reduced to approximately 9–15 h compared to the conventional agar plate method. The plastic film test plate with optimized compound gel demonstrated tremendous potential for detection of antibiotics in milk.
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- 2020
199. Study of an Evaluation Model for AIS Receiver Sensitivity Measurements
- Author
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Gemengyue Gao, Linlin Xu, Jingyun Cao, Qing Hu, and Meng'en Song
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Automatic Identification System ,law ,Computer science ,Real-time computing ,Electrical and Electronic Engineering ,Instrumentation ,Signal ,Sensitivity (electronics) ,law.invention ,Data transmission - Abstract
To guarantee that ships can navigate safely, the International Maritime Organization mandates that all ships navigating internationally must install the automatic identification system (AIS). AIS works in the very high-frequency (VHF) maritime mobile band, and to ensure the signal receiving performance of AIS equipment, it is necessary that the receiver sensitivity can be quickly evaluated and detected. Hence, we propose an evaluation model of AIS receiver sensitivity. The model first measures the packet error rate (PER) of AIS data transmission at a specific power. The distribution of the AIS receiver sensitivity characteristic curve under any transmitted power can be directly obtained, and then whether or not the sensitivity of the AIS receiver satisfies the performance requirements can be quickly evaluated. Regression analysis and the results of actual measurement demonstrate that this model has a goodness of fit (R-squared) value of 0.99 between the power–PER curve of the analog input signal and the measured data, which signifies test efficiency and accuracy beyond conventional test methods.
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- 2020
200. MicroRNA-200a improves diabetic endothelial dysfunction by targeting KEAP1/NRF2
- Author
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Fuzhe Ma, Zhaohui Wang, Ziping Jiang, Jun Jiang, Hao Wu, Lei Du, Junduo Wu, Wenlin Huang, Linlin Xu, Laijin Lu, and Ye Jia
- Subjects
0301 basic medicine ,medicine.medical_specialty ,NF-E2-Related Factor 2 ,Endocrinology, Diabetes and Metabolism ,030209 endocrinology & metabolism ,Inflammation ,medicine.disease_cause ,Antioxidants ,Diabetes Complications ,03 medical and health sciences ,0302 clinical medicine ,Endocrinology ,In vivo ,Diabetes mellitus ,Internal medicine ,microRNA ,Animals ,Medicine ,Endothelial dysfunction ,Mice, Knockout ,Gene knockdown ,Kelch-Like ECH-Associated Protein 1 ,business.industry ,Endothelial Cells ,respiratory system ,medicine.disease ,KEAP1 ,Mice, Inbred C57BL ,MicroRNAs ,Oxidative Stress ,030104 developmental biology ,Gene Expression Regulation ,Endothelium, Vascular ,medicine.symptom ,business ,Oxidative stress ,Signal Transduction - Abstract
Over a half of the diabetic individuals develop macrovascular complications that cause high mortality. Oxidative stress (OS) promotes endothelial dysfunction (ED) which is a critical early step toward diabetic macrovascular complications. Nuclear factor erythroid 2-related factor 2 (NRF2) is a master regulator of cellular antioxidant defense system and combats diabetes-induced OS. Previously, we found that impaired NRF2 antioxidant signaling contributed to diabetes-induced endothelial OS and dysfunction in mice. The present study has investigated the effect of microRNA-200a (miR-200a) on NRF2 signaling and diabetic ED. In aortic endothelial cells (ECs) isolated from C57BL/6 wild-type (WT) mice, high glucose (HG) reduced miR-200a levels and increased the expression of kelch-like ECH-associated protein 1 (Keap1) – a target of miR-200a and a negative regulator of NRF2. This led to the inactivation of NRF2 signaling and exacerbation of OS and inflammation. miR-200a mimic (miR-200a-M) or inhibitor modulated KEAP1/NRF2 antioxidant signaling and manipulated OS and inflammation under HG conditions. These effects were completely abolished by knockdown of Keap1, indicating that Keap1 mRNA is a major target of miR-200a. Moreover, the protective effect of miR-200a-M was completely abrogated in aortic ECs isolated from C57BL/6 Nrf2 knockout (KO) mice, demonstrating that NRF2 is required for miR-200a’s actions. In vivo, miR-200a-M inhibited aortic Keap1 expression, activated NRF2 signaling, and attenuated hyperglycemia-induced OS, inflammation and ED in the WT, but not Nrf2 KO, mice. Therefore, the present study has uncovered miR-200a/KEAP1/NRF2 signaling that controls aortic endothelial antioxidant capacity, which protects against diabetic ED.
- Published
- 2020
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