430 results on '"Neeson P"'
Search Results
152. Variable-Velocity Traveling-Wave Ion Mobility Separation Enhancing Peak Capacity for Data-Independent Acquisition Proteomics.
- Author
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Haynes, Sarah E., Polasky, Daniel A., Dixit, Sugyan M., Majmudar, Jaimeen D., Neeson, Kieran, Ruotolo, Brandon T., and Martin, Brent R.
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- 2017
- Full Text
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153. CD3 bright signals on γδ T cells identify IL‐17A‐producing Vγ6Vδ1 + T cells
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Paget, C, primary, Chow, M T, additional, Gherardin, N A, additional, Beavis, P A, additional, Uldrich, A P, additional, Duret, H, additional, Hassane, M, additional, Souza‐Fonseca‐Guimaraes, F, additional, Mogilenko, D A, additional, Staumont‐Sallé, D, additional, Escalante, N K, additional, Hill, G R, additional, Neeson, P, additional, Ritchie, D S, additional, Dombrowicz, D, additional, Mallevaey, T, additional, Trottein, F, additional, Belz, G T, additional, Godfrey, D I, additional, and Smyth, M J, additional
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- 2014
- Full Text
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154. IPH4102, a monoclonal antibody directed against the immune receptor molecule KIR3DL2, for the treatment of cutaneous T-cell lymphoma
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Van Der Weyden, Carrie, Bagot, Martine, Neeson, Paul, Darcy, Phil K., and Prince, H. Miles
- Abstract
ABSTRACTIntroduction: Therapeutic options for mycosis fungoides and Sézary syndrome include a variety of immunomodulatory, epigenetic, and cytotoxic options; however, none has been demonstrated to be efficacious for all patients, or to deliver deep and durable responses to the majority of patients. In this review, we examine the monoclonal antibody, IPH4102, a novel agent for the treatment of cutaneous T-cell lymphoma.Areas covered: In this review, we examine data demonstrating the tissue specificity of KIR3DL2 receptor, which is highly expressed on the malignant cells in cutaneous T-cell lymphoma, including mycosis fungoides and Sézary syndrome. This specificity has led to the development of the agent IPH4102. Preclinical data showing efficacy of IPH4102 in vivoare outlined, as well as the results from Phase I clinical trials, which suggest that the agent is both efficacious and well-tolerated. Larger scale clinical trials are to follow.Expert Opinion: We examine the putative benefit of IPH4102 in comparison to established agents already in the clinic, highlighting its efficacy and relative safety. We also examine possible directions that may better define the role of IPH4102 in the treatment of T-cell lymphoma in the future.
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- 2018
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155. Natural killer T cell defects in multiple myeloma and the impact of lenalidomide therapy
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Chan, A C, primary, Neeson, P, additional, Leeansyah, E, additional, Tainton, K, additional, Quach, H, additional, Prince, H M, additional, Harrison, S J, additional, Godfrey, D I, additional, Ritchie, D, additional, and Berzins, S P, additional
- Published
- 2013
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156. NeoAdjuvant pembrolizumab and STEreotactic radiotherapy prior to nephrectomy for renal cell carcinoma (NAPSTER): A phase II randomised clinical trial
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Ali, Muhammad, Wood, Simon, Pryor, David, Moon, Daniel, Bressel, Mathias, Azad, Arun A., Mitchell, Catherine, Murphy, Declan, Zargar, Homi, Hardcastle, Nick, Kearsley, Jamie, Eapen, Renu, Wong, Lih Ming, Cuff, Katharine, Lawrentschuk, Nathan, Neeson, Paul J., and Siva, Shankar
- Abstract
Surgery remains the standard of care for localised renal cell carcinoma (RCC). Nevertheless, nearly 50% of patients with high-risk disease experience relapse after surgery, with distant sites being common. Considering improved outcomes in terms of disease-free survival with adjuvant immunotherapy with pembrolizumab, we hypothesise that neoadjuvant SABR with or without the addition of pembrolizumab before nephrectomy will lead to improved disease outcomes by evoking better immune response in the presence of an extensive reserve of tumor-associated antigens.
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- 2023
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157. A high rate of durable responses with romidepsin, bortezomib, and dexamethasone in relapsed or refractory multiple myeloma.
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Neeson P., Johnstone R., Dickinson M., Prince H.M., Nichols J., Harrison S.J., Quach H., Link E., Seymour J.F., Ritchie D.S., Ruell S., Dean J., Januszewicz H., Neeson P., Johnstone R., Dickinson M., Prince H.M., Nichols J., Harrison S.J., Quach H., Link E., Seymour J.F., Ritchie D.S., Ruell S., Dean J., and Januszewicz H.
- Abstract
We report results from a study exploring the combination of romidepsin, bortezomib, and dexamethasone for the treatment of patients with multiple myeloma (MM) previously treated with > 1 prior therapy. The primary objective was to determine the maximum tolerated dose (MTD) of the combination using a novel accelerated dose-escalation schedule in patients with relapsed or refractory MM. The secondary objective was to determine overall response (OR), time to progression (TTP), and overall survival (OS). The MTD identified was bortezomib 1.3 mg/m2 (days 1, 4, 8, and 11), dexamethasone 20 mg (days 1, 2, 4, 5, 8, 9, 11, and 12), and romidepsin 10 mg/m2 (days 1, 8, and 15) every 28 days. Thrombocytopenia (64%) was the most common >= grade 3 hematologic toxicity. Peripheral neuropathy occurred in 76% of patients (n = 19) (>= grade 3, 8%; 95% confidence interval [CI] 1%-26%). Maintenance romidepsin 10 mg/m2 (on days 1 and 8 of a 28-day cycle) proved feasible, with 12 patients receiving a median of 7.5 cycles (range: 1-29). An OR (M-protein) of > minor response (MR) was seen in 18 of 25 patients (72%); 2 (8%) had complete remissions (CRs) and 13 (52%) had partial responses (PRs), including 7 (28%) with very good PRs (VGPRs). The median TTP was 7.2 (95% CI: 5.5-19.6) months, and the median OS was > 36 months. This regimen shows activity with manageable toxicity and warrants further evaluation. This trial was registered at www.clinicaltrials.gov as NCT00431990. © 2011 by The American Society of Hematology.
- Published
- 2012
158. Clinical associations and characterisation of antineutrophil cytoplasmic antibodies directed against bactericidal/permeability-increasing protein and azurocidin.
- Author
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Doery J.C.G., Nassis L., Paspaliaris B., Neeson P., Neil J., Knight K.R., Daskalakis M., Cooper T., Savige J., Doery J.C.G., Nassis L., Paspaliaris B., Neeson P., Neil J., Knight K.R., Daskalakis M., Cooper T., and Savige J.
- Abstract
Bactericidal/permeability-increasing protein (BPI) and azurocidin (AZ) are recently described target antigens of antineutrophil cytoplasmic antibodies (ANCA). In this study, BPI-ANCA were demonstrated most often in patients with ulcerative colitis (36/92, 39%), Crohn's disease (17/66, 26%) and cystic fibrosis (11/14, 79%), but also in patients with rheumatoid arthritis (8/40, 20%), systemic lupus erythematosus (SLE) (111/65, 17%) and mixed connective tissue disease (4/18, 22%). BPI-ANCA were also common in sera containing antinuclear (ANA) (9/43, 21%) or antidouble-stranded (ds) DNA (7/28, 25%) antibodies. There was no increased frequency of abnormal alpha1-antitrypsin (alpha1-AT) phenotypes in patients with BPI-ANCA, and BPI-ANCA were not more common in individuals with an abnormal phenotype. The predominant IgG subclasses were IgG1 and IgG3; IgA but not IgM was present. Both IgG and IgA BPI-ANCA were high affinity antibodies, and the affinity of IgG antibodies did not change with time in the sera tested. Four of the five sera (80%) containing BPI-ANCA did not bind to denatured, reduced BPI, suggesting that most BPI-ANCA recognised conformational epitopes. AZ-ANCA were demonstrated in 2/11 patients (18%) with Wegener's granulomatosis, 3/12 (25%) with cystic fibrosis and 3/14 (21%) with chronic active hepatitis. AZ-ANCA were present in 5/25 sera (25%) with ANA, but the levels were only marginally elevated. AZ-ANCA were uncommon in patients with inflammatory bowel and rheumatological diseases, and in sera containing other autoantibodies. Again, there was no association with abnormal alpha1-AT phenotypes. BPI represents a major ANCA target antigen in patients with rheumatological as well as inflammatory bowel disease and cystic fibrosis, but AZ-ANCA are uncommon.
- Published
- 2012
159. Antithyroid and antiadrenal autoantibodies in antiglomerular basement membrane disease, thin basement membrane disease and Alport syndrome.
- Author
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Branley P., Thurlow P., Savige J.A., Neeson P., Holdsworth S., Branley P., Thurlow P., Savige J.A., Neeson P., and Holdsworth S.
- Abstract
The basement membranes of the glomerulus, thyroid and adrenal all contain the Goodpasture antigen, the target of autoantibodies in antiglomerular basement membrane (GBM) disease. Antithyroid antibodies can be associated with antiGBM disease, and there have been occasional reports of antithyroid antibodies in Alport syndrome, an inherited kidney disease where the GBM lacks the Goodpasture antigen. The aim of this study was to determine how often antithyroid and antiadrenal autoantibodies occurred in antiGBM disease, Alport syndrome and a related condition, thin basement membrane disease (TBMD). Sera from patients with antiGBM disease (n = 19), Alport syndrome (n = 5) or TBMD (n = 13) were tested for antithyroglobulin, antithyroid microsomal and antiadrenal antibodies. Five of the patients with antiGBM disease (5/19, 26%, P NS) had antimicrosomal, and one had antithyroglobulin, antibodies (1/19, 5%, P NS). No patient with Alport syndrome had antithyroid antibodies. One with TBMD (1/13, 8%, P NS) had antithyroglobulin and antimicrosomal antibodies at titres of 1/400 and 1/25,600, respectively. Both patients with antithyroglobulin antibodies had previously been diagnosed with hypothyroidism. No one with antiGBM disease, Alport syndrome or TBMD had antiadrenal antibodies. Antithyroid microsomal antibodies do not occur significantly more often in patients with antiGBM disease than in normals, and antithyroid and antiadrenal antibodies are not associated with Alport syndrome or TBMD.
- Published
- 2012
160. Are the immuno-stimulatory properties of Lenalidomide extinguished by co-administration of Dexamethasone?
- Author
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Hsu, A, Ritchie, DS, Neeson, P, Hsu, A, Ritchie, DS, and Neeson, P
- Abstract
Dexamethasone has been a mainstay of anti-myeloma therapy for 20 years. However, it is intensely immunosuppressive and may limit the efficacy of the immune system to control myeloma, and limit the exciting opportunities to use immune stimulating drug therapies such as Lenalidomide to maximize the fight against this disease.
- Published
- 2012
161. Drug-mediated and cellular immunotherapy in multiple myeloma.
- Author
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Neeson P., Ritchie D.S., Quach H., Fielding K., Neeson P., Ritchie D.S., Quach H., and Fielding K.
- Abstract
Multiple myeloma is an immunologically relevant disease, which subverts and suppresses immunity, but that may also be amenable to immunological control. Novel drug and cell-based therapies provide an opportunity for the design of antimyeloma immunotherapy. Reversing the immunosuppression associated myeloma remains a substantial challenge. The minimal residual disease setting achieved by autologous stem cell transplant or highly efficacious induction therapy may reverse this immunoparesis and provide a setting for induction of antimyeloma T-cell responses. Adoptive cytotoxic T-lymphocyte/NK therapy and comprehensive treatment with immunomodulatory drug therapy represent means by which antimyeloma immune responses may be promoted. In addition, apoptosis-inducing therapies may prime endogenous antigen presentation via immunogenic cell death, which again may be enhanced by the addition of immunomodulatory drug therapy. © 2010 Future Medicine Ltd.
- Published
- 2010
162. Autologous peripheral blood T lymphocytes transduced with an anti lewisy chimeric receptor gene can be infused safely and persist in patients with lewisy positive acute myeloid leukaemia
- Author
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Khot, A., primary, Ritchie, D., additional, Neeson, P., additional, Peinert, S., additional, Tai, T., additional, Kravets, L., additional, Chen, K., additional, Hoenemann, D., additional, Shin, M., additional, Tainton, K., additional, Westwood, J., additional, Kershaw, M., additional, Haurat, J., additional, Trapani, J., additional, Smyth, M., additional, Darcy, P., additional, Scott, A., additional, Wall, D., additional, Gambell, P., additional, Dickinson, M., additional, Westerman, D., additional, Hicks, R., additional, and Prince, M., additional
- Published
- 2013
- Full Text
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163. Prioritizing ecological restoration among sites in multi-stressor landscapes.
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Neeson, Thomas M., Smith, Sigrid D. P., Allan, J. David, and McIntyre, Peter B.
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ECOSYSTEM management ,ECOSYSTEMS ,BIOMES ,ECOLOGICAL districts ,ENDANGERED ecosystems - Abstract
Most ecosystems are impacted by multiple local and long-distance stressors, many of which interact in complex ways. We present a framework for prioritizing ecological restoration efforts among sites in multi-stressor landscapes. Using a simple model, we show that both the economic and sociopolitical costs of restoration will typically be lower at sites with a relatively small number of severe problems than at sites with numerous lesser problems. Based on these results, we propose using cumulative stress and evenness of stressor impact as complementary indices that together reflect key challenges of restoring a site to improved condition. To illustrate this approach, we analyze stressor evenness across the world's rivers and the Laurentian Great Lakes. This exploration reveals that evenness and cumulative stress are decoupled, enabling selection of sites where remediating a modest number of high-intensity stressors could substantially reduce cumulative stress. Just as species richness and species evenness are fundamental axes of biological diversity, we argue that cumulative stress and stressor evenness constitute fundamental axes for identifying restoration opportunities in multi-stressor landscapes. Our results highlight opportunities to boost restoration efficiency through strategic use of multi-stressor datasets to identify sites that maximize ecological response per stressor remediated. This prioritization framework can also be expanded to account for the feasibility of remediation and the expected societal benefits of restoration projects. [ABSTRACT FROM AUTHOR]
- Published
- 2016
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164. The rise of novelty in ecosystems.
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Radeloff, Volker C., Williams, John W., Bateman, Brooke L., Burke, Kevin D., Carter, Sarah K., Childress, Evan S., Cromwell, Kara J., Gratton, Claudio, Hasley, Andrew O., Kraemer, Benjamin M., Latzka, Alexander W., Marin-Spiotta, Erika, Meine, Curt D., Munoz, Samuel E., Neeson, Thomas M., Pidgeon, Anna M., Rissman, Adena R., Rivera, Ricardo J., Szymanski, Laura M., and Usinowicz, Jacob
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ECOSYSTEMS ,BIODIVERSITY conservation ,TEMPERATURE ,METEOROLOGICAL precipitation ,NITROGEN in agriculture - Abstract
Rapid and ongoing change creates novelty in ecosystems everywhere, both when comparing contemporary systems to their historical baselines, and predicted future systems to the present. However, the level of novelty varies greatly among places. Here we propose a formal and quantifiable definition of abiotic and biotic novelty in ecosystems, map abiotic novelty globally, and discuss the implications of novelty for the science of ecology and for biodiversity conservation. We define novelty as the degree of dissimilarity of a system, measured in one or more dimensions relative to a reference baseline, usually defined as either the present or a time window in the past. In this conceptualization, novelty varies in degree, it is multidimensional, can be measured, and requires a temporal and spatial reference. This definition moves beyond prior categorical definitions of novel ecosystems, and does not include human agency, self-perpetuation, or irreversibility as criteria. Our global assessment of novelty was based on abiotic factors (temperature, precipitation, and nitrogen deposition) plus human population, and shows that there are already large areas with high novelty today relative to the early 20th century, and that there will even be more such areas by 2050. Interestingly, the places that are most novel are often not the places where absolute changes are largest; highlighting that novelty is inherently different from change. For the ecological sciences, highly novel ecosystems present new opportunities to test ecological theories, but also challenge the predictive ability of ecological models and their validation. For biodiversity conservation, increasing novelty presents some opportunities, but largely challenges. Conservation action is necessary along the entire continuum of novelty, by redoubling efforts to protect areas where novelty is low, identifying conservation opportunities where novelty is high, developing flexible yet strong regulations and policies, and establishing long-term experiments to test management approaches. Meeting the challenge of novelty will require advances in the science of ecology, and new and creative conservation approaches. [ABSTRACT FROM AUTHOR]
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- 2015
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165. CMTM6 maintains the expression of PD-L1 and regulates anti-tumour immunity
- Author
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Burr, Marian L., Sparbier, Christina E., Chan, Yih-Chih, Williamson, James C., Woods, Katherine, Beavis, Paul A., Lam, Enid Y. N., Henderson, Melissa A., Bell, Charles C., Stolzenburg, Sabine, Gilan, Omer, Bloor, Stuart, Noori, Tahereh, Morgens, David W., Bassik, Michael C., Neeson, Paul J., Behren, Andreas, Darcy, Phillip K., Dawson, Sarah-Jane, Voskoboinik, Ilia, Trapani, Joseph A., Cebon, Jonathan, Lehner, Paul J., and Dawson, Mark A.
- Abstract
Cancer cells exploit the expression of the programmed death-1 (PD-1) ligand 1 (PD-L1) to subvert T-cell-mediated immunosurveillance. The success of therapies that disrupt PD-L1-mediated tumour tolerance has highlighted the need to understand the molecular regulation of PD-L1 expression. Here we identify the uncharacterized protein CMTM6 as a critical regulator of PD-L1 in a broad range of cancer cells, by using a genome-wide CRISPR–Cas9 screen. CMTM6 is a ubiquitously expressed protein that binds PD-L1 and maintains its cell surface expression. CMTM6 is not required for PD-L1 maturation but co-localizes with PD-L1 at the plasma membrane and in recycling endosomes, where it prevents PD-L1 from being targeted for lysosome-mediated degradation. Using a quantitative approach to profile the entire plasma membrane proteome, we find that CMTM6 displays specificity for PD-L1. Notably, CMTM6 depletion decreases PD-L1 without compromising cell surface expression of MHC class I. CMTM6 depletion, via the reduction of PD-L1, significantly alleviates the suppression of tumour-specific T cell activity in vitro and in vivo. These findings provide insights into the biology of PD-L1 regulation, identify a previously unrecognized master regulator of this critical immune checkpoint and highlight a potential therapeutic target to overcome immune evasion by tumour cells.
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- 2017
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166. PD-1 blockade enhances elotuzumab efficacy in mouse tumor models
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Bezman, Natalie A., Jhatakia, Amy, Kearney, Alper Y., Brender, Ty, Maurer, Mark, Henning, Karla, Jenkins, Misty R., Rogers, Amy J., Neeson, Paul J., Korman, Alan J., Robbins, Michael D., and Graziano, Robert F.
- Abstract
Elotuzumab, a humanized monoclonal antibody that binds human signaling lymphocytic activation molecule F7 (hSLAMF7) on myeloma cells, was developed to treat patients with multiple myeloma (MM). Elotuzumab has a dual mechanism of action that includes the direct activation of natural killer (NK) cells and the induction of NK cell–mediated antibody-dependent cellular cytotoxicity. This study aimed to characterize the effects of elotuzumab on NK cells in vitro and in patients with MM and to determine whether elotuzumab antitumor activity was improved by programmed death receptor-1 (PD-1) blockade. Elotuzumab promoted NK cell activation when added to a coculture of human NK cells and SLAMF7-expressing myeloma cells. An increased frequency of activated NK cells was observed in bone marrow aspirates from elotuzumab-treated patients. In mouse tumor models expressing hSLAMF7, maximal antitumor efficacy of a murine immunoglobulin G2a version of elotuzumab (elotuzumab-g2a) required both Fcγ receptor–expressing NK cells and CD8+T cells and was significantly enhanced by coadministration of anti–PD-1 antibody. In these mouse models, elotuzumab-g2a and anti–PD-1 combination treatment promoted tumor-infiltrating NK and CD8+T-cell activation, as well as increased intratumoral cytokine and chemokine release. These observations support the rationale for clinical investigation of elotuzumab/anti–PD-1 combination therapy in patients with MM.
- Published
- 2017
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167. Pet Project or Best Project? Online Decision Support Tools for Prioritizing Barrier Removals in the Great Lakes and Beyond
- Author
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Moody, Allison T., Neeson, Thomas M., Wangen, Steve, Dischler, Jeff, Diebel, Matthew W., Milt, Austin, Herbert, Matthew, Khoury, Mary, Yacobson, Eugene, Doran, Patrick J., Ferris, Michael C., O'Hanley, Jesse R., and McIntyre, Peter B.
- Abstract
Structures that block movement of fish through river networks are built to serve a variety of societal needs, including transportation, hydroelectric power, and exclusion of exotic species. Due to their abundance, road crossings and dams reduce the amount of habitat available to fish that migrate from the sea or lakes into rivers to breed. The benefits to fish of removing any particular barrier depends on its location within the river network, its passability to fish, and the relative position of other barriers within the network. Balancing the trade-offs between ecological and societal values makes choosing among potential removal projects difficult. To facilitate prioritization of barrier removals, we developed an online decision support tool (DST) with three functions: (1) view existing barriers at various spatial scales; (2) modify information about barriers, including removal costs; and (3) run optimization models to identify portfolios of removals that provide the greatest amount of habitat access for a given budget. A survey of available DSTs addressing barrier removal prioritization indicates that barrier visualization is becoming widespread but few tools allow dynamic calculation of connectivity metrics, scenario analysis, or optimization. Having these additional functions, our DST enables organizations to develop barrier removal priorities based on cost-effectiveness in restoring aquatic connectivity.
- Published
- 2017
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168. TSTEM-like CAR-T cells exhibit improved persistence and tumor control compared with conventional CAR-T cells in preclinical models
- Author
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Meyran, Deborah, Zhu, Joe Jiang, Butler, Jeanne, Tantalo, Daniela, MacDonald, Sean, Nguyen, Thu Ngoc, Wang, Minyu, Thio, Niko, D’Souza, Criselle, Qin, Vicky Mengfei, Slaney, Clare, Harrison, Aaron, Sek, Kevin, Petrone, Pasquale, Thia, Kevin, Giuffrida, Lauren, Scott, Andrew M., Terry, Rachael L., Tran, Ben, Desai, Jayesh, Prince, H. Miles, Harrison, Simon J., Beavis, Paul A., Kershaw, Michael H., Solomon, Ben, Ekert, Paul G., Trapani, Joseph A., Darcy, Phillip K., and Neeson, Paul J.
- Abstract
Patients who receive chimeric antigen receptor (CAR)–T cells that are enriched in memory T cells exhibit better disease control as a result of increased expansion and persistence of the CAR-T cells. Human memory T cells include stem-like CD8+memory T cell progenitors that can become either functional stem-like T (TSTEM) cells or dysfunctional T progenitor exhausted (TPEX) cells. To that end, we demonstrated that TSTEMcells were less abundant in infused CAR-T cell products in a phase 1 clinical trial testing Lewis Y-CAR-T cells (NCT03851146), and the infused CAR-T cells displayed poor persistence in patients. To address this issue, we developed a production protocol to generate TSTEM-like CAR-T cells enriched for expression of genes in cell replication pathways. Compared with conventional CAR-T cells, TSTEM-like CAR-T cells had enhanced proliferative capacity and increased cytokine secretion after CAR stimulation, including after chronic CAR stimulation in vitro. These responses were dependent on the presence of CD4+T cells during TSTEM-like CAR-T cell production. Adoptive transfer of TSTEM-like CAR-T cells induced better control of established tumors and resistance to tumor rechallenge in preclinical models. These more favorable outcomes were associated with increased persistence of TSTEM-like CAR-T cells and an increased memory T cell pool. Last, TSTEM-like CAR-T cells and anti–programmed cell death protein 1 (PD-1) treatment eradicated established tumors, and this was associated with increased tumor-infiltrating CD8+CAR+T cells producing interferon-γ. In conclusion, our CAR-T cell protocol generated TSTEM-like CAR-T cells with enhanced therapeutic efficacy, resulting in increased proliferative capacity and persistence in vivo.
- Published
- 2023
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169. Biomarker analysis of pivotal phase II study of oral panobinostat (PAN) in relapsed/refractory Hodgkin lymphoma (HL) patients following autologous stem cell transplant (ASCT).
- Author
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Harrison, S. J., primary, Hsu, A. K., additional, Neeson, P. J., additional, Younes, A., additional, Sureda, A., additional, Engert, A., additional, Li, M., additional, Savage, P., additional, Bugarini, R., additional, Le Corre, C., additional, Williams, D. E., additional, Gallagher, J. D., additional, Shen, A., additional, and Ritchie, D., additional
- Published
- 2011
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170. 195 Biomarkers for response to lenalidomide (LEN) treatment in patients with myelodysplastic syndromes (MDS)
- Author
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Burbury, K., primary, Gambell, P., additional, Neeson, P., additional, Chen, K., additional, Kenealy, M., additional, Seymour, J.F., additional, Prince, H.M., additional, Westerman, D., additional, and Ritchie, D., additional
- Published
- 2011
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171. Mechanism of action of immunomodulatory drugs (IMiDS) in multiple myeloma
- Author
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Quach, H, primary, Ritchie, D, additional, Stewart, A K, additional, Neeson, P, additional, Harrison, S, additional, Smyth, M J, additional, and Prince, H M, additional
- Published
- 2009
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172. The anti-cancer drug, phenoxodiol, kills primary myeloid and lymphoid leukemic blasts and rapidly proliferating T cells
- Author
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Herst, P. M., primary, Davis, J. E., additional, Neeson, P., additional, Berridge, M. V., additional, and Ritchie, D. S., additional
- Published
- 2009
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173. B211 Lenalidomide Raises Low Regulatory T Cells in Myeloma
- Author
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Quach, H, primary, Ritchie, D, additional, Neeson, P, additional, Harrison, S, additional, Tai, T, additional, Tainton, K, additional, Lynch, K, additional, and Prince, HM, additional
- Published
- 2009
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174. CD3bright signals on γδ T cells identify IL-17A-producing Vγ6Vδ1+ T cells.
- Author
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Paget, C, Chow, M T, Gherardin, N A, Beavis, P A, Uldrich, A P, Duret, H, Hassane, M, Souza‐Fonseca‐Guimaraes, F, Mogilenko, D A, Staumont‐Sallé, D, Escalante, N K, Hill, G R, Neeson, P, Ritchie, D S, Dombrowicz, D, Mallevaey, T, Trottein, F, Belz, G T, Godfrey, D I, and Smyth, M J
- Subjects
INTERLEUKIN-17 ,T cells ,CYTOKINES ,ESCHERICHIA coli ,STAPHYLOCOCCUS aureus ,PHENOTYPES - Abstract
Interleukin-17A (IL-17A) is a pro-inflammatory cytokine that has an important role at mucosal sites in a wide range of immune responses including infection, allergy and auto-immunity. γδ T cells are recognized as IL-17 producers, but based on the level of CD3 expression, we now define the remarkable ability of a CD3
bright γδ T-cell subset with an effector memory phenotype to rapidly produce IL-17A, but not interferon-γ. CD3bright γδ T cells uniformly express the canonical germline encoded Vγ6/Vδ1+ T-cell receptor. They are widely distributed with a preferential representation in the lungs and skin are negatively impacted in the absence of retinoic acid receptor-related orphan receptor gammat expression or endogenous flora. This population responded rapidly to various stimuli in a mechanism involving IL-23 and NOD-like receptor family, pyrin domain containing 3 (NLRP3)-inflammasome-dependent IL-1β. Finally, we demonstrated that IL-17-producing CD3bright γδ T cells responded promptly and strongly to pneumococcal infection and during skin inflammation. Here, we propose a new way to specifically analyze IL-17-producing Vγ6/Vδ1+ T cells based on the level of CD3 signals. Using this gating strategy, our data reinforce the crucial role of this γδ T-cell subset in respiratory and skin disorders. [ABSTRACT FROM AUTHOR]- Published
- 2015
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175. Reliability and refinement of the higher taxa approach for bee richness and composition assessments.
- Author
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van Rijn, Itai, Neeson, Thomas M., and Mandelik, Yael
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BEE ecology ,BIODIVERSITY conservation ,CLASSIFICATION of insects ,POLLINATION by bees ,SPECIES distribution ,ECOLOGICAL niche - Abstract
Limited resources and taxonomic expertise in biodiversity surveys often lead to the application of the higher taxa approach (HTA), i.e., the identification of specimens to genus or higher taxonomic levels rather than to species. The reliability of the HTA varies significantly among studies, yet the factors underlying this variability have rarely been investigated. Bees are an ideal model taxon for testing the HTA because they are highly diverse, challenging to identify, and there is widespread interest in their role as native pollinators, driving demand for efficient diversity assessment tools. Using extensive bee data sets collected across three biomes and various habitats, we assessed the performance of the HTA in reflecting bee species richness and composition patterns at local scales, factors affecting this performance, and ways to improve it. The performance of the HTA varied considerably among biomes, taxonomic levels (genera and subfamilies), and diversity measures (species richness and composition); genus and subfamily richness accounted for 55-77% and 32-61% of the variation in species richness, respectively; genus and subfamily composition accounted for 28-87% and 26-80% of the variation in species composition, respectively. The number of species per higher taxon was a main factor influencing this performance (accounting for 63% of the variation), while the co-occurrence of taxonomically related species had no significant influence on the performance of the HTA. Further subdividing genera by body size contributed to the performance of the HTA and increased its accuracy in representation of compositional patterns by ~16%. Our results have several practical implications. The considerable variability found in the performance of the HTA in representing local-scale richness and composition patterns of bee species dictates caution in implementing this tool in bee surveys. When possible, an a priori evaluation of the expected performance of the HTA should be done, focusing on species distributions within higher taxonomic levels and the species : higher taxa ratio. Integrating morphological characteristics (such as body size) that consistently subdivide genera will improve the HTA's performance. Our results are likely applicable to the implementation of the HTA in other small-bodied and species-rich groups and may contribute to the cost-effectiveness of biodiversity surveys. [ABSTRACT FROM AUTHOR]
- Published
- 2015
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176. Compound Pendant Drop Tensiometry for Interfacial Tension Measurement at Zero BondNumber.
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Neeson, Michael J., Chan, Derek Y. C., and Tabor, Rico F.
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- 2014
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177. A new multi‐parameter flow cytometric assay for monitoring lymphoma growth and spread in a pre‐clinical murine model for human lymphoma
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Neeson, P., primary and Paterson, Y., additional
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- 2004
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178. Unstimulated autologous platelet collection and cryopreservation for platelet refractoriness
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Smith, C.L, primary, Macdougall, C.L, additional, Tait, T.K, additional, Neeson, P, additional, and Myers, B.J, additional
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- 2001
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179. How taxonomic diversity, community structure, and sample size determine the reliability of higher taxon surrogates.
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Neeson, Thomas M., Van Rijn, Itai, and Mandelik, Yael
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BIOLOGICAL classification ,BIODIVERSITY ,MATHEMATICAL models ,ALGORITHMS ,ENVIRONMENTAL protection - Abstract
Ecologists and paleontologists often rely on higher taxon surrogates instead of complete inventories of biological diversity. Despite their intrinsic appeal, the performance of these surrogates has been markedly inconsistent across empirical studies, to the extent that there is no consensus on appropriate taxonomic resolution (i.e., whether genus- or family-level categories are more appropriate) or their overall usefulness. A framework linking the reliability of higher taxon surrogates to biogeographic setting would allow for the interpretation of previously published work and provide some needed guidance regarding the actual application of these surrogates in biodiversity assessments, conservation planning, and the interpretation of the fossil record. We developed a mathematical model to show how taxonomic diversity, community structure, and sampling effort together affect three measures of higher taxon performance: the correlation between species and higher taxon richness, the relative shapes and asymptotes of species and higher taxon accumulation curves, and the efficiency of higher taxa in a complementarity-based reserve-selection algorithm. In our model, higher taxon surrogates performed well in communities in which a few common species were most abundant, and less well in communities with many equally abundant species. Furthermore, higher taxon surrogates performed well when there was a small mean and variance in the number of species per higher taxa. We also show that empirically measured species-higher-taxon correlations can be partly spurious (i.e., a mathematical artifact), except when the species accumulation curve has reached an asymptote. This particular result is of considerable practical interest given the widespread use of rapid survey methods in biodiversity assessment and the application of higher taxon methods to taxa in which species accumulation curves rarely reach an asymptote, e.g., insects. [ABSTRACT FROM AUTHOR]
- Published
- 2013
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180. Identification of Ion Series Using Ion Mobility Mass Spectrometry: The Example of Alkyl-Benzothiophene and Alkyl-Dibenzothiophene Ions in Diesel Fuels.
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Maire, Florian, Neeson, Kieran, Denny, Richard, McCullagh, Michael, Lange, Catherine, Afonso, Carlos, and Giusti, Pierre
- Published
- 2013
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181. Complementary habitat use by wild bees in agro-natural landscapes.
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Mandelik, Yael, Winfree, Rachael, Neeson, Thomas, and Kremen, Claire
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BEE behavior ,HABITAT selection ,PATTERN formation (Biology) ,LANDSCAPES ,BIODIVERSITY - Abstract
The article presents a study on the resource use and community-level patterns of habitat of bees in agro-natural landscapes in the eastern U.S. The study evaluated natural habitat, old fields, and agricultural fields, which feature varied seasonal pattern of floral diversity, amount, and composition. Result shown that most of the wild bees use fallow areas within crops in early and mid-season and uagse old-field in later season. Moreover, natural habitat has limited number of bees.
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- 2012
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182. Towards a Process Domain-Sensitive Substrate Habitat Model for Sea Lampreys in Michigan Rivers.
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Neeson, Thomas M., Adlerstein, Sara A., and Wiley, Michael J.
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Habitat mapping is a common and often useful tool in the ecological management of rivers. The complex nature of fluvial processes, however, makes it difficult to predict the reach-scale distribution of substrate habitat from landscape-scale covariates. An option is to identify and partition a data set on boundaries of geomorphic process domains, within which the globally complex relationships between landscape, climate, and instream habitat may potentially be approximated by a simpler model. In this study, we used regression trees as a machine learning method for partitioning and identifying useful strata in a geographically extensive substrate habitat model for larvae of the sea lamprey Petromyzon marinus, an invasive and economically harmful species in the Laurentian Great Lakes. We used field survey data from over 5,000 substrate habitat transects collected in 43 watersheds of the Lower Peninsula of Michigan, and we created a geographic database of geographical information systems-derived covariates that represent the principal geomorphic influences on substrate habitat. We created three trees in which tree splits delineated (1) spatially contiguous units, (2) noncontiguous units defined by values of the covariates, and (3) both contiguous and noncontiguous units. The adjusted R 2 values of the three trees were 0.30, 0.30, and 0.32, respectively, and all three trees outperformed a single model fitted to the entire data set and a set of models fitted to each watershed individually. The trees identified useful stratifications of Michigan's Lower Peninsula, important geomorphic influences on substrate habitat, and variation in the influence of geomorphic processes on substrate habitat across our study region. Conservation and management applications of our model predictions and tree-based stratifications include sea lamprey population modeling, habitat survey design, and evaluation of dam removal. Received March 28, 2011; accepted August 19, 2011 [ABSTRACT FROM PUBLISHER]
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- 2012
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183. Channel substrate prediction from GIS for habitat estimation in Lake Erie tributaries.
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Gorman, Ann Marie, Whiting, Peter J., Neeson, Thomas M., and Koonce, Joseph F.
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Abstract: The conservation of ecologically and economically important species, as well as the management of invasive species, benefits from the ability to make broad-scale predictions of habitat. In this paper, we revised an existing substrate size model based upon stream power to include variables that are readily-quantifiable in a Geographic Information System (GIS) (i.e. stream slope and drainage area). We found no significant difference between slopes measured in the field using surveying techniques and slopes measured in a GIS using a 10m digital elevation model and high resolution stream dataset. GIS-derived drainage areas and those measured with hand-delineations were also statistically similar. The revised model can be applied using both GIS and field-derived variables to predict median particle sizes from stream power in northeastern Ohio streams draining to Lake Erie. Integration of such models into a GIS could result in regional estimates of the amount and location of preferred fish habitat, which has important applications in fisheries management. In particular, we provide examples of how the predictive substrate model could improve assessment methodologies for invasive sea lamprey, thereby improving eradication measures, and how we may better understand geographic linkages between walleye spawning and nursery habitats. [Copyright &y& Elsevier]
- Published
- 2011
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184. Ex vivo culture of chimeric antigen receptor T cells generates functional CD8+ T cells with effector and central memory-like phenotype.
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Neeson, P., Shin, A., Tainton, K. M., Guru, P., Prince, H. M., Harrison, S. J., Peinert, S., Smyth, M. J., Trapani, J. A., Kershaw, M. H., Darcy, P. K., and Ritchie, D. S.
- Subjects
- *
T cells , *INTERLEUKINS , *MULTIPLE myeloma , *CELL-mediated cytotoxicity , *GENETIC transduction - Abstract
The anti-tumor efficacy of adoptively transferred T cells requires their in vivo persistence and memory polarization. It is unknown if human chimeric antigen receptor (CAR)-expressing T cells can also undergo memory polarization. We examined the functional status of CAR CD8+ T cells, re-directed to Lewis Y antigen (LeY-T), throughout a period of ex vivo expansion. Immediately before culture CD8+ T cells comprised a mixture of phenotypes including naive (CD45RA+/CCR7+/CD27+/CD28+/perforin−), central memory (CM, CD45RA−/CCR7lo/CD27+/CD28+/perforinlo), effector memory (EM, CD45RA−/CCR7−/CD27+/CD28+/perforinmod) and effector (Eff, CD45RA+/CCR7−/CD27−/CD28−/perforinhi) cells. After transduction and expansion culture of peripheral blood mononuclear cells from normal donors or multiple myeloma patients, CD8+ LeY-T cells polarized to EM- and CM-like phenotype. CD8+ LeY-T cells differed from starting CD8+ CM and EM T cells in that CD27, but not CD28, was downregulated. In addition, CD8+ LeY-T cells expressed high levels of perforin, similar to starting CD8+ Eff. CD8+ LeY-T cells also showed hallmarks of both memory and Eff function, underwent homeostatic proliferation in response to interleukin (IL)-15, and showed interferon (IFN)-γ production and cytotoxicity in response to Le-Y antigen on OVCAR-3 (human ovarian adenocarcinoma) cells. This study confirms CD8+ LeY-T cells have a CM- and EM-like phenotype and heterogeneous function consistent with potential to persist in vivo after adoptive transfer. [ABSTRACT FROM AUTHOR]
- Published
- 2010
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185. Factors Affecting Accuracy of Stream Channel Slope Estimates Derived from Geographical Information Systems.
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Neeson, Thomas M., Gorman, Ann Marie, Whiting, Peter J., and Koonce, Joseph F.
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GEOGRAPHIC information systems ,HABITATS ,RIVERS ,SEA lamprey - Abstract
Stream channel slope is often a critical component of geographical information systems (GIS)- based models of preferred habitat of aquatic species, but the relative accuracy of various GIS slope derivation methods is not well established. We examined the accuracy of GIS-derived stream slopes for a set of stream reaches in Idaho and Ohio. We also used the Ohio data set to examine in more detail the effects of stream reach length, source of GIS file representing the stream path ("shapefile"), and digital elevation model (DEM) resolution on the accuracy of GIS-derived slopes. The accuracy of GIS-derived slopes in the Ohio dataset improved with increasing reach length, but we could not draw any consistent conclusions about the effect of DEM resolution or shapefile. We present a simple and efficient method for improving GIS-derived slopes by identifying probable elevation errors in the GIS-derived longitudinal stream profiles. The resulting derived slopes were improved in all cases; the slopes derived by using a 10-m DEM and a manually traced stream shapefile were the most accurate. We demonstrate how our results can be used to evaluate the feasibility of implementing a GIS-based habitat model of sea lampreys Petromyzon marinus. [ABSTRACT FROM AUTHOR]
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- 2008
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186. Predicting Sea Lamprey (Petromyzon marinus) Ammocoete Habitat Using Geographic Information Systems.
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Neeson, Thomas M., Koonce, Joseph F., and Whiting, Peter J.
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The sea lamprey (Petromyzon marinus) is an invasive, parasitic species with a long history of decimating fisheries in the Laurentian Great Lakes. The sea lamprey life cycle consists of stream larval ammocoete, open water parasitic, and adult spawning phases. Population control of sea lamprey is achieved mainly through the application of chemical lampricides that target the sedentary larval stage. The physical characteristics of preferred ammocoete habitat are well defined at the sub-reach scale (< 50 m). We tested whether the spatial distribution of beds of preferred ammocoete habitat depends upon a specific set of geomorphic variables (field-measured slope, and geographic information system (GIS)- derived curvature, radius of curvature, presence of a confluence, and valley wall type!. We tested for this relationship at several spatial scales of stream length ranging from 50 m to 300 m, on the East Branch of the Chagrin River, Ohio, USA, a tributary stream to Lake Erie. Of the five geomorphic variables tested, field-measured slope and radius of curvature influence the probability of a stream segment containing preferred habitat at a stream segment length of 50 m. We found no relationships at longer stream segment lengths. GIS-estimated slopes were not sufficiently accurate at such short segment lengths, so the final model included radius of curvature only. These results are applicable to the Empiric Stream Treatment Ranking (ESTR) system, which ranks tributaries for treatment with lampricide based partially on the total amount of preferred ammocoete habitat. GIS-based estimates of the total amount of preferred ammocoete habitat may complement current field-based estimates, or provide a basis far nested sampling designs. [ABSTRACT FROM AUTHOR]
- Published
- 2007
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187. The relative risk of police use-of-force options: Evaluating the potential for deployment of electronic weaponry.
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Jenkinson, Emma, Neeson, Clare, and Bleetman, Anthony
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FIREARMS ,POLICE ,LAW enforcement ,POLICE dogs ,CRIMINAL justice system - Abstract
An electronic weapon, the Taser M26, has recently entered the use-of-force continuum for police officers in England and Wales and is currently licensed for use by authorised firearms officers only. The aim of this report was to assess the relative risk of injury to officers and subjects of police use-of-force options and to evaluate whether the current positioning of the M26 in the use-of-force hierarchy is appropriate. We analysed use-of-force data from Northamptonshire Police Force and M26 field use data from TASER International®. We found officer injury rates associated with M26 deployment were lower than those for CS spray and baton use. Subject injury rates were lower in M26 deployment than in deployment of CS spray, batons or police dogs, We suggest that the M26 should be made more widely available to police officers in the UK. [ABSTRACT FROM AUTHOR]
- Published
- 2006
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188. Oxygen Concentration and Demand in Lake Erie Sediments.
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Matisoff, Gerald and Neeson, Thomas M.
- Abstract
Regular ship-board monitoring of oxygen in the hypolimnion of Lake Erie has been established to monitor the status of the lake and determine if the water quality is meeting the terms of the Great Lakes Water Quality Agreement (GLWQA). However, lake-wide monitoring is expensive and there is a difference of opinion on whether dissolved oxygen depletion rate is a good indicator of the condition of Lake Erie. One the most poorly known components of the Lake Erie oxygen budget is the sediment-oxygen demand (SOD). In this work, vertical oxygen concentration profiles in Lake Erie sediments are measured by incrementally inserting a micro-oxygen electrode. The SOD is the flux of oxygen across the sediment-water interface and is calculated from the oxygen profiles assuming Fickian diffusion at the sediment-water interface. Oxygen consumption was measured in sediments collected on four dates from 3, 13, and 5 stations in the western, central, and eastern basins, respectively. Oxygen concentration pro- files in the sediment and the SOD are well described by a diffusion/reaction transport model where oxygen diffuses into the sediment and is consumed by reactions that follow MichaelisMenten kinetics. The flux of oxygen into the sediment in the central basin in August 2002 was 1.03 ± 0.2 71 × 10
-11 mol O2 /cm²/sec, within about 30% of the hypolimnetic oxygen depletion rate derived from monitoring. These results suggest that modeling of oxygen profiles hold promise as an alternative technique to regular monitoring for determining hypolimnetic oxygen depletion rates. [ABSTRACT FROM AUTHOR]- Published
- 2005
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189. The Drug Vehicle and Solvent N-Methylpyrrolidone Is an Immunomodulator and Antimyeloma Compound
- Author
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Shortt, Jake, Hsu, Andy K., Martin, Benjamin P., Doggett, Karen, Matthews, Geoffrey M., Doyle, Maria A., Ellul, Jason, Jockel, Tina E., Andrews, Daniel M., Hogg, Simon J., Reitsma, Andrea, Faulkner, David, Bergsagel, P. Leif, Chesi, Marta, Heath, Joan K., Denny, William A., Thompson, Philip E., Neeson, Paul J., Ritchie, David S., McArthur, Grant A., and Johnstone, Ricky W.
- Abstract
N-methyl-2-pyrrolidone (NMP) is a common solvent and drug vehicle. We discovered unexpected antineoplastic and immunomodulatory activity of NMP in a cMYC-driven myeloma model. Coincident to this, NMP was identified as an acetyllysine mimetic and candidate bromodomain ligand. Accordingly, NMP-treated cells demonstrated transcriptional overlap with BET-bromodomain inhibition, including downregulation of cMYCand IRF4. NMP’s immunomodulatory activity occurred at sub-BET inhibitory concentrations, and, despite phenotypic similarities to lenalidomide, its antimyeloma activity was independent of the IMiD targets cereblon and Ikaros-1/3. Thus, low-affinity yet broad-spectrum bromodomain inhibition by NMP mediates biologically potent, cereblon-independent immunomodulation and at higher doses targets malignant cells directly via BET antagonism. These data reveal that NMP is a functional acetyllysine mimetic with pleotropic antimyeloma and immunomodulatory activities. Our studies highlight the potential therapeutic benefits of NMP, the consequences of current human NMP exposures, and the need for reassessment of scientific literature where NMP was used as an “inert” drug-delivery vehicle.
- Published
- 2014
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190. A high rate of durable responses with romidepsin, bortezomib, and dexamethasone in relapsed or refractory multiple myeloma
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Harrison, Simon J., Quach, Hang, Link, Emma, Seymour, John F., Ritchie, David S., Ruell, Sam, Dean, Joanne, Januszewicz, Henry, Johnstone, Ricky, Neeson, Paul, Dickinson, Michael, Nichols, Jean, and Prince, H. Miles
- Abstract
We report results from a study exploring the combination of romidepsin, bortezomib, and dexamethasone for the treatment of patients with multiple myeloma (MM) previously treated with > 1 prior therapy. The primary objective was to determine the maximum tolerated dose (MTD) of the combination using a novel accelerated dose-escalation schedule in patients with relapsed or refractory MM. The secondary objective was to determine overall response (OR), time to progression (TTP), and overall survival (OS). The MTD identified was bortezomib 1.3 mg/m2(days 1, 4, 8, and 11), dexamethasone 20 mg (days 1, 2, 4, 5, 8, 9, 11, and 12), and romidepsin 10 mg/m2(days 1, 8, and 15) every 28 days. Thrombocytopenia (64%) was the most common ≥ grade 3 hematologic toxicity. Peripheral neuropathy occurred in 76% of patients (n = 19) (≥ grade 3, 8%; 95% confidence interval [CI] 1%-26%). Maintenance romidepsin 10 mg/m2(on days 1 and 8 of a 28-day cycle) proved feasible, with 12 patients receiving a median of 7.5 cycles (range: 1-29). An OR (M-protein) of > minor response (MR) was seen in 18 of 25 patients (72%); 2 (8%) had complete remissions (CRs) and 13 (52%) had partial responses (PRs), including 7 (28%) with very good PRs (VGPRs). The median TTP was 7.2 (95% CI: 5.5-19.6) months, and the median OS was > 36 months. This regimen shows activity with manageable toxicity and warrants further evaluation. This trial was registered at www.clinicaltrials.govas NCT00431990.
- Published
- 2011
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191. The immunostimulatory effect of lenalidomide on NK-cell function is profoundly inhibited by concurrent dexamethasone therapy
- Author
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Hsu, Andy K., Quach, Hang, Tai, Tsin, Prince, H. Miles, Harrison, Simon J., Trapani, Joseph A., Smyth, Mark J., Neeson, Paul, and Ritchie, David S.
- Abstract
Lenalidomide combined with dexamethasone is an effective treatment for refractory/relapsed multiple myeloma (MM). Lenalidomide stimulates natural killer (NK) cells and enhances antitumor responses. We assessed NK cell number and function in 25 patients with MM participating in a clinical trial of lenalidomide and dexamethasone. NK cell numbers increased from a mean of 2.20 ± 0.05 × 105/mL (baseline) to a mean of 3.90 ± 0.03 × 105/mL (cycle 6; P = .05); however, in vitro NK-cell–mediated cytotoxicity decreased from 48.9% ± 6.8% to 27.6% ± 5.1% (P = .0028) and could not be rescued by lenalidomide retreatment. Lenalidomide increased normal donor NK-cell cytotoxicity in vitro from 38.5% to 53.3%, but this was completely abrogated by dexamethasone. Dexamethasone suppression of NK cell–mediated cytotoxicity was partially reversed by a 3-day washout, but these cells remained refractory to lenalidomide-induced enhanced function. Lymphocyte subset depletion experiments revealed that lenalidomide's enhancement of NK cell–mediated cytotoxicity was mediated by CD4+ T-cell production of interleukin 2 and that dexamethasone acted by suppressing interleukin-2 production. Similarly, the reduced ability of NK cells from patients with MM to respond to lenalidomide was also due to impaired CD4 T-cell function. Our findings indicate that lenalidomide immunostimulatory effects on patient NK cells are severely blunted by concurrent dexamethasone administration.
- Published
- 2011
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192. The level of glycolytic metabolism in acute myeloid leukemia blasts at diagnosis is prognostic for clinical outcome
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Herst, Patries M., Howman, Rebecca A., Neeson, Paul J., Berridge, Michael V., and Ritchie, David S.
- Abstract
Simple colormetric assay to measure glycolysis in AML blasts at diagnosis can distinguish two distinct populations with significantly different prognoses. This research investigated the level of glycolytic metabolism in leukemic blasts as a prognostic marker in AML. Using an in vitro dye‐reduction assay, we determined the level of glycolytic metabolism in 26 BM samples taken from 23 adult patients with newly diagnosed (n=19) or relapsed (n=4) AML, and AML blasts stratified into two distinct cohorts of moderate (<70%) or high (>80%) levels of glycolytic metabolism. All samples taken at relapse were moderately glycolytic. However, nine of the 19 samples taken at diagnosis were highly glycolytic, and 10 were moderately glycolytic. Three patients had paired samples taken at diagnosis and relapse, and the glycolytic metabolism of these samples did not alter between the two time‐points. The level of glycolytic metabolism did not correlate with the percentage of marrow blasts, patient age, or CG/molecular risk group. Highly glycolytic AML blasts were more resistant to apoptosis induced by ATRA and/or ATO in vitro, suggesting potential resistance to induction chemotherapy, as has been observed in solid tumors. Despite this, high levels of glycolytic metabolism at diagnosis were predictive of a significantly improved duration of CR1 and OS following AML remission induction chemotherapy. In conclusion, we found that the extent of myeloblast glycolysis may be an effective and easily applied method to determine the pretreatment prognosis of AML.
- Published
- 2011
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193. Oral Administration of a Salmonella enterica-Based Vaccine Expressing Bacillus anthracis Protective Antigen Confers Protection against Aerosolized B. anthracis
- Author
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Stokes, Margaret G. M., Titball, Richard W., Neeson, Brendan N., Galen, James E., Walker, Nicola J., Stagg, Anthony J., Jenner, Dominic C., Thwaite, Joanne E., Nataro, James P., Baillie, Leslie W. J., and Atkins, Helen S.
- Abstract
Bacillus anthracis is the causative agent of anthrax, a disease that affects wildlife, livestock, and humans. Protection against anthrax is primarily afforded by immunity to the B. anthracis protective antigen (PA), particularly PA domains 4 and 1. To further the development of an orally delivered human vaccine for mass vaccination against anthrax, we produced Salmonella enterica serovar Typhimurium expressing full-length PA, PA domains 1 and 4, or PA domain 4 using codon-optimized PA DNA fused to the S. enterica serovar Typhi ClyA and under the control of the ompC promoter. Oral immunization of A/J mice with Salmonella expressing full-length PA protected five of six mice against a challenge with 105CFU of aerosolized B. anthracis STI spores, whereas Salmonella expressing PA domains 1 and 4 provided only 25% protection (two of eight mice), and Salmonella expressing PA domain 4 or a Salmonella-only control afforded no measurable protection. However, a purified recombinant fusion protein of domains 1 and 4 provided 100% protection, and purified recombinant 4 provided protection in three of eight immunized mice. Thus, we demonstrate for the first time the efficacy of an oral S. enterica-based vaccine against aerosolized B. anthracis spores.
- Published
- 2007
194. Oral Administration of a Salmonella enterica-Based Vaccine Expressing Bacillus anthracisProtective Antigen Confers Protection against Aerosolized B. anthracis
- Author
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Stokes, Margaret G. M., Titball, Richard W., Neeson, Brendan N., Galen, James E., Walker, Nicola J., Stagg, Anthony J., Jenner, Dominic C., Thwaite, Joanne E., Nataro, James P., Baillie, Leslie W. J., and Atkins, Helen S.
- Abstract
ABSTRACTBacillus anthracisis the causative agent of anthrax, a disease that affects wildlife, livestock, and humans. Protection against anthrax is primarily afforded by immunity to the B. anthracisprotective antigen (PA), particularly PA domains 4 and 1. To further the development of an orally delivered human vaccine for mass vaccination against anthrax, we produced Salmonella entericaserovar Typhimurium expressing full-length PA, PA domains 1 and 4, or PA domain 4 using codon-optimized PA DNA fused to the S. entericaserovar Typhi ClyA and under the control of the ompCpromoter. Oral immunization of A/J mice with Salmonellaexpressing full-length PA protected five of six mice against a challenge with 105CFU of aerosolized B. anthracisSTI spores, whereas Salmonellaexpressing PA domains 1 and 4 provided only 25% protection (two of eight mice), and Salmonellaexpressing PA domain 4 or a Salmonella-only control afforded no measurable protection. However, a purified recombinant fusion protein of domains 1 and 4 provided 100% protection, and purified recombinant 4 provided protection in three of eight immunized mice. Thus, we demonstrate for the first time the efficacy of an oral S. enterica-based vaccine against aerosolized B. anthracisspores.
- Published
- 2007
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- View/download PDF
195. Lymphocyte-facilitated tumour cell adhesion to endothelial cells: the role of high affinity leucocyte integrins
- Author
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Neeson, Paul J., Thurlow, Peter J., Jamieson, Gary P., and Bradley, Chris
- Abstract
Lymphocytes transiently express an active form of the β−2integrin LFA-1 (LFA-1Af) which has conformational changes in extracellular domains enabling higher affinity binding to the ligand ICAM-1. In this study, we investigated the role of lymphocytes bearing LFA-1Afas potential mediators of binding of 1CAM-1-positive tumour cells to endothelium.
- Published
- 2003
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196. Discrimination of Human Pathogenic Subspecies of Francisella tularensisby Using Restriction Fragment Length Polymorphism
- Author
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Thomas, Rebecca, Johansson, Anders, Neeson, Brendan, Isherwood, Karen, Sjo¨stedt, Anders, Ellis, Jill, and Titball, Richard W.
- Abstract
ABSTRACTWe describe the use of two insertion sequence elements (ISFtu1 and ISFtu2) in Francisella tularensisto type strains by restriction fragment length polymorphism (RFLP). The RFLP profiles of 17 epidemiologically unrelated isolates were determined and compared. Our results showed that RFLP profiles can be used to assign F. tularensisstrains into five main groups corresponding to strains of F. tularensissubsp. tularensis, F. tularensisstrain ATCC 6223, strains of F. tularensissubsp. holarctica, strains of F. tularensissubsp. holarcticafrom Japan, and F. tularensissubsp. mediaasiatica. The results confirm the genetic identities of these subspecies and also support the suggestion that strains of F. tularensissubsp. holarcticafrom Japan should be considered members of a separate biovar. These findings should support future studies to determine the genetic differences between strains of F. tularensisat the whole-genome level.
- Published
- 2003
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197. A characterisation of long‐term depression induced by metabotropic glutamate receptor activation in the rat hippocampus in vitro
- Author
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Fitzjohn, Stephen M., Palmer, Mary J., May, Jolyon E. R., Neeson, Anne, Morris, Stephen A. C., and Collingridge, Graham L.
- Abstract
1In the CA1 region of hippocampal slices prepared from juvenile (12‐ to 18‐day‐old) rats, activation of group I metabotropic l‐glutamate (mGlu) receptors by the specific agonist (RS)‐3,5‐dihydroxyphenylglycine (DHPG) induces a form of long‐term depression (LTD) of excitatory synaptic transmission.2We have used a variety of electrophysiological techniques applied to CA1 neurones in hippocampal slices and from pyramidal cells in dissociated hippocampal cultures to investigate the Ca2+dependence and locus of expression of DHPG‐induced LTD.3In patch‐clamp experiments from hippocampal slices, bath application of DHPG induced a depression of synaptically evoked responses that persisted for the duration of the recording (up to 2 h after commencing washout of DHPG) in 27 of 29 neurones investigated.4DHPG‐induced LTD was associated with an increase in both the paired‐pulse facilitation ratio and the coefficient of variation of EPSCs.5Using dendritic recording, there was a decrease in EPSC success rate (number of trials that elicited a detectable response) but no change in potency (mean EPSC amplitude excluding failures) associated with DHPG‐induced LTD.6In experiments using dissociated hippocampal cultures, application of DHPG elicited a persistent decrease in the frequency of tetrodotoxin‐resistant miniature EPSCs but no change in the amplitude of such events.7DHPG‐induced LTD was not blocked by intracellular application of the calcium chelator BAPTA. It was also unaffected when intracellular calcium stores were depleted by perfusion with thapsigargin. Furthermore, when synaptic transmission was blocked by perfusing with Ca2+‐free medium, DHPG application reliably induced LTD.8These data suggest that DHPG‐induced LTD is Ca2+independent and is expressed presynaptically.
- Published
- 2001
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198. Characterization of activated lymphocyte‐tumor cell adhesion
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Neeson, Paul J., Thurlow, Peter J., and Jamieson, Gary P.
- Abstract
This study demonstrates the variable expression of ICAM‐1 and leukocyte function antigen‐3 (LFA‐3) on four tumor cell lines (COLO526, K562, Daudi, and HT‐29). In addition, phorbol ester (PMA) activation of lymphocytes modulated LFA‐1 from a uniform to a clustered surface distribution; whereas after treatment with high levels of Mg2+ions, the unique epitope for high‐affinity LFA‐1 was identified using clone Mab24. Using a flow cytometric adhesion assay it was demonstrated that PMA‐activated lymphocytes formed conjugates with COLO526 and Daudi, and that these conjugates were inhibited by anti‐CD2 with varying inhibition by LFA‐1 clones MHM24 and 25.3.1. When lymphocytes were induced to express the high‐affinity form of LFA‐1, conjugates were identified with COLO526, K562, and Daudi and these conjugates were sensitive to the presence of both CD2 and LFA‐1 antibodies. Further studies using confocal microscopy confirmed significant adhesion between peripheral blood lymphocytes pre‐treated with either PMA or high levels of Mg2+and the adherent cell line COLO526. In conclusion, this unique study has demonstrated for the first time the important role of the active form of LFA‐1 on the lymphocyte cell surface for conjugate formation with an ICAM‐1‐expressing tumor cell; also, two pathways of cell signaling were identified for conjugate formation to occur. J. Leukoc. Biol.67: 847–855; 2000.
- Published
- 2000
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199. Generating CAR T cells from tumor-infiltrating lymphocytes
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Mills, Jane K., Henderson, Melissa A., Giuffrida, Lauren, Petrone, Pasquale, Westwood, Jennifer A., Darcy, Phillip K., Neeson, Paul J., Kershaw, Michael H., and Gyorki, David E.
- Abstract
Background:Tumor-infiltrating lymphocytes (TILs) and chimeric antigen receptor (CAR) T-cell therapies have demonstrated promising, though limited, efficacy against melanoma. Methods:We designed a model system to explore the efficacy of dual specific T cells derived from melanoma patient TILs by transduction with a Her2-specific CAR. Results:Metastatic melanoma cells in our biobank constitutively expressed Her2 antigen. CAR-TIL produced greater amounts of IFN compared with parental TIL, when co-cultured with Her2 expressing tumor lines, including autologous melanoma tumor lines, although no consistent increase in cytotoxicity by TIL was afforded by expression of a CAR. Results of an in vivostudy in NSG mice demonstrated tumor shrinkage when CAR-TILs were used in an adoptive cell therapy protocol. Conclusion:Potential limitations of transduced TIL in our study included limited proliferative potential and a terminally differentiated phenotype, which would need addressing in further work before consideration of clinical translation.
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- 2021
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200. The ‘Easy Street’ Myth: Self harm among Aboriginal and non‐Aboriginal female sole parents in urban state housing
- Author
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Radford, Anthony J., Brice, Graham A., Harris, Ross, Byl, Muriel, Monten, Helen, McNeece‐Neeson, Maureen, and Hassan, Riaz
- Abstract
Objective: To test the hypothesis that, controlling for socio‐demographic factors, destructive behaviour among Aboriginal and non‐Aboriginal female sole parents will not be significantly different. Method: This study took place among an urban population of sole parents in Adelaide, South Australia, living in government housing. Two sample subsets were made up of 52 Aboriginal and 45 non‐Aboriginal mothers from similar postcodes. Trained interviewers administered a questionnaire which, in addition to basic demographic data, elicited information concerning finance, housing, upbringing, experience of abuse and police interaction. The major issue of concern in the study was suicide attempt. Results: 1‐in‐3 of the whole sample, 2‐in‐5 of the non‐Aboriginal and 1 ‐in‐4 of the Aboriginal subset had attempted suicide at least once and half more than once. Statistical differences among ‘attempters’ vs. ‘non‐attempters’, irrespective of ethnicity, included increased familial alcohol abuse, physical and sexual abuse, economic difficulty, poor self esteem and perceived discriminatory treatment by welfare agencies and, in the case of Aboriginals, by police. Conclusion: The social environment is critical to understanding destructive behaviour, including self‐harm, regardless of culture or ethnicity. The data show that suicide attempts among female sole parents in State‐housing is one of the few health indices for which Aboriginal statistics are less than for non‐Aboriginals. Implications: It is evident that class, rather than ethnicity, better explains self‐harm in this urban population. It is suggested that reluctance to access services, especially in times of crisis, relates in part to perceptions of care services and that, for Aboriginals, the value of culturally appropriate community‐run services have specific public health and policy implications.
- Published
- 1999
- Full Text
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