3,011 results on '"PASQUIER P"'
Search Results
152. Recommendations to distinguish behavioural variant frontotemporal dementia from psychiatric disorders
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Ducharme, Simon, Dols, Annemiek, Laforce, Robert, Devenney, Emma, Kumfor, Fiona, van den Stock, Jan, Dallaire-Théroux, Caroline, Seelaar, Harro, Gossink, Flora, Vijverberg, Everard, Huey, Edward, Vandenbulcke, Mathieu, Masellis, Mario, Trieu, Calvin, Onyike, Chiadi, Caramelli, Paulo, de Souza, Leonardo Cruz, Santillo, Alexander, Waldö, Maria Landqvist, Landin-Romero, Ramon, Piguet, Olivier, Kelso, Wendy, Eratne, Dhamidhu, Velakoulis, Dennis, Ikeda, Manabu, Perry, David, Pressman, Peter, Boeve, Bradley, Vandenberghe, Rik, Mendez, Mario, Azuar, Carole, Levy, Richard, Le Ber, Isabelle, Baez, Sandra, Lerner, Alan, Ellajosyula, Ratnavalli, Pasquier, Florence, Galimberti, Daniela, Scarpini, Elio, van Swieten, John, Hornberger, Michael, Rosen, Howard, Hodges, John, Diehl-Schmid, Janine, and Pijnenburg, Yolande
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Biological Psychology ,Biomedical and Clinical Sciences ,Psychology ,Neurosciences ,Behavioral and Social Science ,Dementia ,Alzheimer's Disease Related Dementias (ADRD) ,Alzheimer's Disease including Alzheimer's Disease Related Dementias (AD/ADRD) ,Frontotemporal Dementia (FTD) ,Mental Health ,Aging ,Serious Mental Illness ,Neurodegenerative ,Acquired Cognitive Impairment ,Clinical Research ,Genetic Testing ,Brain Disorders ,Biomedical Imaging ,Mental Illness ,Genetics ,4.2 Evaluation of markers and technologies ,4.1 Discovery and preclinical testing of markers and technologies ,2.1 Biological and endogenous factors ,Mental health ,Neurological ,Delayed Diagnosis ,Diagnosis ,Differential ,Female ,Fluorodeoxyglucose F18 ,Frontotemporal Dementia ,Humans ,Magnetic Resonance Imaging ,Male ,Mental Disorders ,Neuroimaging ,Neurologic Examination ,Neuropsychological Tests ,Positron-Emission Tomography ,frontotemporal dementia ,psychiatry ,differential diagnosis ,guidelines ,biomarkers ,Medical and Health Sciences ,Psychology and Cognitive Sciences ,Neurology & Neurosurgery ,Biomedical and clinical sciences ,Health sciences - Abstract
The behavioural variant of frontotemporal dementia (bvFTD) is a frequent cause of early-onset dementia. The diagnosis of bvFTD remains challenging because of the limited accuracy of neuroimaging in the early disease stages and the absence of molecular biomarkers, and therefore relies predominantly on clinical assessment. BvFTD shows significant symptomatic overlap with non-degenerative primary psychiatric disorders including major depressive disorder, bipolar disorder, schizophrenia, obsessive-compulsive disorder, autism spectrum disorders and even personality disorders. To date, ∼50% of patients with bvFTD receive a prior psychiatric diagnosis, and average diagnostic delay is up to 5-6 years from symptom onset. It is also not uncommon for patients with primary psychiatric disorders to be wrongly diagnosed with bvFTD. The Neuropsychiatric International Consortium for Frontotemporal Dementia was recently established to determine the current best clinical practice and set up an international collaboration to share a common dataset for future research. The goal of the present paper was to review the existing literature on the diagnosis of bvFTD and its differential diagnosis with primary psychiatric disorders to provide consensus recommendations on the clinical assessment. A systematic literature search with a narrative review was performed to determine all bvFTD-related diagnostic evidence for the following topics: bvFTD history taking, psychiatric assessment, clinical scales, physical and neurological examination, bedside cognitive tests, neuropsychological assessment, social cognition, structural neuroimaging, functional neuroimaging, CSF and genetic testing. For each topic, responsible team members proposed a set of minimal requirements, optimal clinical recommendations, and tools requiring further research or those that should be developed. Recommendations were listed if they reached a ≥ 85% expert consensus based on an online survey among all consortium participants. New recommendations include performing at least one formal social cognition test in the standard neuropsychological battery for bvFTD. We emphasize the importance of 3D-T1 brain MRI with a standardized review protocol including validated visual atrophy rating scales, and to consider volumetric analyses if available. We clarify the role of 18F-fluorodeoxyglucose PET for the exclusion of bvFTD when normal, whereas non-specific regional metabolism abnormalities should not be over-interpreted in the case of a psychiatric differential diagnosis. We highlight the potential role of serum or CSF neurofilament light chain to differentiate bvFTD from primary psychiatric disorders. Finally, based on the increasing literature and clinical experience, the consortium determined that screening for C9orf72 mutation should be performed in all possible/probable bvFTD cases or suspected cases with strong psychiatric features.
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- 2020
153. Working on the Identification and Expression of Emotions in Primary Schools for Better Oral Production: An Exploratory Study of Links between Emotional and Language Skills
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Pasquier, Aurélie, Ponthieu, Guillaume, Papon, Lola, Bréjard, Vincent, and Rezzi, Nathalie
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The main aim of this study was to test the effect of an emotionally-focused educational program on the language and emotional skills of children aged 9-11. Sixty seven pupils were divided randomly into an experimental group who received teaching on emotions in an oracy context, and into a control group who completed a learning sequence unconnected with the emotions and in a traditional educational oral context. The emotional and non-emotional language skills of the two groups were assessed in the pretest and the posttest. While it is noticeable that levels of vocabulary and comprehension improved for all pupils in the post test, only those who had completed the education programme on emotions displayed significantly improved skills in general oral production. The results highlight the fact that educational practices encouraging oracy in natural situations contribute to the development of oral language and listening and empathy skills.
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- 2022
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154. Loss of brainstem white matter predicts onset and motor neuron symptoms in C9orf72 expansion carriers: a GENFI study
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Pérez-Millan, Agnès, Borrego-Écija, Sergi, van Swieten, John C., Jiskoot, Lize, Moreno, Fermin, Laforce, Robert, Graff, Caroline, Masellis, Mario, Tartaglia, Maria Carmela, Rowe, James B., Borroni, Barbara, Finger, Elizabeth, Synofzik, Matthis, Galimberti, Daniela, Vandenberghe, Rik, de Mendonça, Alexandre, Butler, Chris R., Gerhard, Alexander, Ducharme, Simon, Le Ber, Isabelle, Santana, Isabel, Pasquier, Florence, Levin, Johannes, Otto, Markus, Sorbi, Sandro, Tiraboschi, Pietro, Seelaar, Harro, Langheinrich, Tobias, Rohrer, Jonathan D., Sala-Llonch, Roser, and Sánchez-Valle, Raquel
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- 2023
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155. Motor symptoms in genetic frontotemporal dementia: developing a new module for clinical rating scales
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Samra, Kiran, MacDougall, Amy M., Peakman, Georgia, Bouzigues, Arabella, Bocchetta, Martina, Cash, David M., Greaves, Caroline V., Convery, Rhian S., van Swieten, John C., Jiskoot, Lize, Seelaar, Harro, Moreno, Fermin, Sanchez-Valle, Raquel, Laforce, Robert, Graff, Caroline, Masellis, Mario, Tartaglia, Carmela, Rowe, James B., Borroni, Barbara, Finger, Elizabeth, Synofzik, Matthis, Galimberti, Daniela, Vandenberghe, Rik, de Mendonça, Alexandre, Butler, Chris R., Gerhard, Alexander, Ducharme, Simon, Le Ber, Isabelle, Tiraboschi, Pietro, Santana, Isabel, Pasquier, Florence, Levin, Johannes, Otto, Markus, Sorbi, Sandro, Rohrer, Jonathan D., and Russell, Lucy L.
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- 2023
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156. Gilteritinib activity in refractory or relapsed FLT3-mutated acute myeloid leukemia patients previously treated by intensive chemotherapy and midostaurin: a study from the French AML Intergroup ALFA/FILO
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Dumas, Pierre-Yves, Raffoux, Emmanuel, Bérard, Emilie, Bertoli, Sarah, Hospital, Marie-Anne, Heiblig, Maël, Desbrosses, Yohann, Bonmati, Caroline, Pautas, Cécile, Lambert, Juliette, Orvain, Corentin, Banos, Anne, Pasquier, Florence, Peterlin, Pierre, Marchand, Tony, Uzunov, Madalina, Frayfer, Jamilé, Turlure, Pascal, Cluzeau, Thomas, Jourdan, Eric, Himberlin, Chantal, Tavernier, Emmanuelle, Villate, Alban, Haiat, Stephanie, Chretien, Marie-Lorraine, Carre, Martin, Chantepie, Sylvain, Vaida, Ioana, Wemeau, Mathieu, Chebrek, Safia, Guillerm, Gaelle, Guièze, Romain, Debarri, Houria, Gehlkopf, Eve, Laribi, Kamel, Marcais, Ambroise, Santagostino, Alberto, Béné, Marie-Christine, Mineur, Ariane, Pigneux, Arnaud, Dombret, Hervé, and Récher, Christian
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- 2023
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157. Quantitative susceptibility mapping demonstrates different patterns of iron overload in subtypes of early-onset Alzheimer’s disease
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Kuchcinski, Grégory, Patin, Lucas, Lopes, Renaud, Leroy, Mélanie, Delbeuck, Xavier, Rollin-Sillaire, Adeline, Lebouvier, Thibaud, Wang, Yi, Spincemaille, Pascal, Tourdias, Thomas, Hacein-Bey, Lotfi, Devos, David, Pasquier, Florence, Leclerc, Xavier, Pruvo, Jean-Pierre, and Verclytte, Sébastien
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- 2023
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158. Viewpoint | Personal Data and the Internet of Things: It is time to care about digital provenance
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Pasquier, Thomas, Eyers, David, and Bacon, Jean
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Computer Science - Computers and Society ,Computer Science - Cryptography and Security - Abstract
The Internet of Things promises a connected environment reacting to and addressing our every need, but based on the assumption that all of our movements and words can be recorded and analysed to achieve this end. Ubiquitous surveillance is also a precondition for most dystopian societies, both real and fictional. How our personal data is processed and consumed in an ever more connected world must imperatively be made transparent, and more effective technical solutions than those currently on offer, to manage personal data must urgently be investigated., Comment: 3 pages, 0 figures, preprint for Communication of the ACM
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- 2019
159. Machine Learning for Data-Driven Movement Generation: a Review of the State of the Art
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Alemi, Omid and Pasquier, Philippe
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Computer Science - Machine Learning ,Computer Science - Graphics ,Statistics - Machine Learning - Abstract
The rise of non-linear and interactive media such as video games has increased the need for automatic movement animation generation. In this survey, we review and analyze different aspects of building automatic movement generation systems using machine learning techniques and motion capture data. We cover topics such as high-level movement characterization, training data, features representation, machine learning models, and evaluation methods. We conclude by presenting a discussion of the reviewed literature and outlining the research gaps and remaining challenges for future work.
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- 2019
160. A Unified Picture of Lattice Instabilities in Metallic Transition Metal Dichalcogenides
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Pasquier, Diego and Yazyev, Oleg V.
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Condensed Matter - Mesoscale and Nanoscale Physics ,Condensed Matter - Materials Science ,Condensed Matter - Strongly Correlated Electrons - Abstract
Transition metal dichalcogenides (TMDs) in the $1T$ polymorph are subject to a rich variety of periodic lattice distortions, often referred to as charge density waves (CDW) when not too strong. We study from first principles the fermiology and phonon dispersion of three representative single-layer transition metal disulfides with different occupation of the $t_{2g}$ subshell: TaS$_2$ ($t_{2g}^1$), WS$_2$ ($t_{2g}^2$), and ReS$_2$ ($t_{2g}^3$) across a broad range of doping levels. While strong electron-phonon interactions are at the heart of these instabilities, we argue that away from half-filling of the $t_{2g}$ subshell, the doping dependence of the calculated CDW wave vector can be explained from simple fermiology arguments, so that a weak-coupling nesting picture is a useful starting point for understanding. On the other hand, when the $t_{2g}$ subshell is closer to half-filling, we show that nesting is irrelevant, while a real-space strong-coupling picture of bonding Wannier functions is more appropriate and simple bond-counting arguments apply. Our study thus provides a unifying picture of lattice distortions in $1T$ TMDs that bridges the two regimes, while the crossover between these regimes can be attained by tuning the filling of the $t_{2g}$ orbitals., Comment: 6 pages, 3 figures
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- 2019
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161. Analysis of mortality over 7 years in a mature trauma center: evolution of preventable mortality in severe trauma patients
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Guigues, Sarah, Cotte, Jean, Morvan, Jean-Baptiste, de Lesquen, Henry, Prunet, Bertrand, Boutonnet, Mathieu, Libert, Nicolas, Pasquier, Pierre, Meaudre, Eric, Bordes, Julien, and Cardinale, Michael
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- 2022
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162. The conundrum of the definition of haemorrhagic shock: a pragmatic exploration based on a scoping review, experts’ survey and a cohort analysis
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James, Arthur, Abback, Paer-Selim, Pasquier, Pierre, Ausset, Sylvain, Duranteau, Jacques, Hoffmann, Clément, Gauss, Tobias, and Hamada, Sophie Rym
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- 2022
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163. The biogeochemical balance of oceanic nickel cycling
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John, Seth G., Kelly, Rachel L., Bian, Xiaopeng, Fu, Feixue, Smith, M. Isabel, Lanning, Nathan T., Liang, Hengdi, Pasquier, Benoît, Seelen, Emily A., Holzer, Mark, Wasylenki, Laura, Conway, Tim M., Fitzsimmons, Jessica N., Hutchins, David A., and Yang, Shun-Chung
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- 2022
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164. Genome-wide meta-analysis for Alzheimer’s disease cerebrospinal fluid biomarkers
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Jansen, Iris E., van der Lee, Sven J., Gomez-Fonseca, Duber, de Rojas, Itziar, Dalmasso, Maria Carolina, Grenier-Boley, Benjamin, Zettergren, Anna, Mishra, Aniket, Ali, Muhammad, Andrade, Victor, Bellenguez, Céline, Kleineidam, Luca, Küçükali, Fahri, Sung, Yun Ju, Tesí, Niccolo, Vromen, Ellen M., Wightman, Douglas P., Alcolea, Daniel, Alegret, Montserrat, Alvarez, Ignacio, Amouyel, Philippe, Athanasiu, Lavinia, Bahrami, Shahram, Bailly, Henri, Belbin, Olivia, Bergh, Sverre, Bertram, Lars, Biessels, Geert Jan, Blennow, Kaj, Blesa, Rafael, Boada, Mercè, Boland, Anne, Buerger, Katharina, Carracedo, Ángel, Cervera-Carles, Laura, Chene, Geneviève, Claassen, Jurgen A. H. R., Debette, Stephanie, Deleuze, Jean-Francois, de Deyn, Peter Paul, Diehl-Schmid, Janine, Djurovic, Srdjan, Dols-Icardo, Oriol, Dufouil, Carole, Duron, Emmanuelle, Düzel, Emrah, Fladby, Tormod, Fortea, Juan, Frölich, Lutz, García-González, Pablo, Garcia-Martinez, Maria, Giegling, Ina, Goldhardt, Oliver, Gobom, Johan, Grimmer, Timo, Haapasalo, Annakaisa, Hampel, Harald, Hanon, Olivier, Hausner, Lucrezia, Heilmann-Heimbach, Stefanie, Helisalmi, Seppo, Heneka, Michael T., Hernández, Isabel, Herukka, Sanna-Kaisa, Holstege, Henne, Jarholm, Jonas, Kern, Silke, Knapskog, Anne-Brita, Koivisto, Anne M., Kornhuber, Johannes, Kuulasmaa, Teemu, Lage, Carmen, Laske, Christoph, Leinonen, Ville, Lewczuk, Piotr, Lleó, Alberto, de Munain, Adolfo López, Lopez-Garcia, Sara, Maier, Wolfgang, Marquié, Marta, Mol, Merel O., Montrreal, Laura, Moreno, Fermin, Moreno-Grau, Sonia, Nicolas, Gael, Nöthen, Markus M., Orellana, Adelina, Pålhaugen, Lene, Papma, Janne M., Pasquier, Florence, Perneczky, Robert, Peters, Oliver, Pijnenburg, Yolande A. L., Popp, Julius, Posthuma, Danielle, Pozueta, Ana, Priller, Josef, Puerta, Raquel, Quintela, Inés, Ramakers, Inez, Rodriguez-Rodriguez, Eloy, Rujescu, Dan, Saltvedt, Ingvild, Sanchez-Juan, Pascual, Scheltens, Philip, Scherbaum, Norbert, Schmid, Matthias, Schneider, Anja, Selbæk, Geir, Selnes, Per, Shadrin, Alexey, Skoog, Ingmar, Soininen, Hilkka, Tárraga, Lluís, Teipel, Stefan, Tijms, Betty, Tsolaki, Magda, Van Broeckhoven, Christine, Van Dongen, Jasper, van Swieten, John C., Vandenberghe, Rik, Vidal, Jean-Sébastien, Visser, Pieter J., Vogelgsang, Jonathan, Waern, Margda, Wagner, Michael, Wiltfang, Jens, Wittens, Mandy M. J., Zetterberg, Henrik, Zulaica, Miren, van Duijn, Cornelia M., Bjerke, Maria, Engelborghs, Sebastiaan, Jessen, Frank, Teunissen, Charlotte E., Pastor, Pau, Hiltunen, Mikko, Ingelsson, Martin, Andreassen, Ole A., Clarimón, Jordi, Sleegers, Kristel, Ruiz, Agustín, Ramirez, Alfredo, Cruchaga, Carlos, Lambert, Jean-Charles, and van der Flier, Wiesje
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- 2022
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165. Risk aversion and equilibrium selection in a vertical contracting setting: an experiment
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Pasquier, Nicolas, Bonroy, Olivier, and Garapin, Alexis
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- 2022
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166. Neural correlates of episodic memory in the Memento cohort
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Epelbaum, Stéphane, Bouteloup, Vincent, Mangin, Jean, La Corte, Valentina, Migliaccio, Raffaela, Bertin, Hugo, Habert, Marie O., Fischer, Clara, Azouani, Chabha, Fillon, Ludovic, Chupin, Marie, Vellas, Bruno, Pasquier, Florence, Dartigues, Jean, Blanc, Frédéric, Gabelle, Audrey, Ceccaldi, Mathieu, Krolak-Salmon, Pierre, Hugon, Jacques, Hanon, Olivier, Rouaud, Olivier, David, Renaud, Chêne, Geneviève, Dubois, Bruno, and Dufouil, Carole
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Quantitative Biology - Neurons and Cognition - Abstract
IntroductionThe free and cued selective reminding test is used to identify memory deficits in mild cognitive impairment and demented patients. It allows assessing three processes: encoding, storage, and recollection of verbal episodic memory.MethodsWe investigated the neural correlates of these three memory processes in a large cohort study. The Memento cohort enrolled 2323 outpatients presenting either with subjective cognitive decline or mild cognitive impairment who underwent cognitive, structural MRI and, for a subset, fluorodeoxyglucose--positron emission tomography evaluations.ResultsEncoding was associated with a network including parietal and temporal cortices; storage was mainly associated with entorhinal and parahippocampal regions, bilaterally; retrieval was associated with a widespread network encompassing frontal regions.DiscussionThe neural correlates of episodic memory processes can be assessed in large and standardized cohorts of patients at risk for Alzheimer's disease. Their relation to pathophysiological markers of Alzheimer's disease remains to be studied.
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- 2018
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167. Smooth projective horospherical varieties of Picard group $\mathbb{Z}^2$
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Pasquier, Boris
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Mathematics - Algebraic Geometry - Abstract
We classify all smooth projective horospherical varieties of Picard group $\mathbb{Z}^2$ and we give a first description of their geometry via the Log Minimal Model Program.
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- 2018
168. Crystal field, ligand field, and interorbital effects in two-dimensional transition metal dichalcogenides across the periodic table
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Pasquier, Diego and Yazyev, Oleg V.
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Condensed Matter - Mesoscale and Nanoscale Physics ,Condensed Matter - Materials Science ,Condensed Matter - Strongly Correlated Electrons - Abstract
Two-dimensional transition metal dichalcogenides (TMDs) exist in two polymorphs, referred to as $1T$ and $1H$, depending on the coordination sphere of the transition metal atom. The broken octahedral and trigonal prismatic symmetries lead to different crystal and ligand field splittings of the $d$ electron states, resulting in distinct electronic properties. In this work, we quantify the crystal and ligand field parameters of two-dimensional TMDs using a Wannier-function approach. We adopt the methodology proposed by Scaramucci et al. [A. Scaramucci et al., J. Phys.: Condens. Matter 27, 175503 (2015)]. that allows to separate various contributions to the ligand field by choosing different manifolds in the construction of the Wannier functions. We discuss the relevance of the crystal and ligand fields in determining the relative stability of the two polymorphs as a function of the filling of the $d$-shell. Based on the calculated parameters, we conclude that the ligand field, while leading to a small stabilizing factor for the $1H$ polymorph in the $d^1$ and $d^2$ TMDs, plays mostly an indirect role and that hybridization between different $d$ orbitals is the dominant feature. We investigate trends across the periodic table and interpret the variations of the calculated crystal and ligand fields in terms of the change of charge-transfer energy, which allows developing simple chemical intuition., Comment: 16 pages, 14 figures
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- 2018
169. Runtime Analysis of Whole-System Provenance
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Pasquier, Thomas, Han, Xueyuan, Moyer, Thomas, Bates, Adam, Hermant, Olivier, Eyers, David, Bacon, Jean, and Seltzer, Margo
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Computer Science - Cryptography and Security ,Computer Science - Operating Systems - Abstract
Identifying the root cause and impact of a system intrusion remains a foundational challenge in computer security. Digital provenance provides a detailed history of the flow of information within a computing system, connecting suspicious events to their root causes. Although existing provenance-based auditing techniques provide value in forensic analysis, they assume that such analysis takes place only retrospectively. Such post-hoc analysis is insufficient for realtime security applications, moreover, even for forensic tasks, prior provenance collection systems exhibited poor performance and scalability, jeopardizing the timeliness of query responses. We present CamQuery, which provides inline, realtime provenance analysis, making it suitable for implementing security applications. CamQuery is a Linux Security Module that offers support for both userspace and in-kernel execution of analysis applications. We demonstrate the applicability of CamQuery to a variety of runtime security applications including data loss prevention, intrusion detection, and regulatory compliance. In evaluation, we demonstrate that CamQuery reduces the latency of realtime query mechanisms, while imposing minimal overheads on system execution. CamQuery thus enables the further deployment of provenance-based technologies to address central challenges in computer security., Comment: 16 pages, 12 figures, 25th ACM Conference on Computer and Communications Security 2018
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- 2018
170. Deceleration of CIV and SiIV broad absorption lines in X-ray bright quasar SDSS-J092345+512710
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Joshi, Ravi, Srianand, Raghunathan, Chand, Hum, Wu, Xue-Bing, Noterdaeme, Pasquier, Petitjean, Patrick, and Ho, Luis C.
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Astrophysics - Astrophysics of Galaxies - Abstract
We report a synchronized kinematic shift of CIV and SiIV broad absorption lines (BAL) in a high-ionization, radio-loud, and X-ray bright quasar SDSS-J092345+512710 (at $z_{em} \sim 2.1627$). This quasar shows two broad absorption components (blue component at $v \sim 14,000\ km\ s^{-1}$, and red component at $v \sim 4,000\ km\ s^{-1}$ with respect to the quasars systemic redshift). The absorption profiles of CIV and SiIV BAL of the blue component show decrease in outflow velocity with an average deceleration rate of $-1.62_{-0.05}^{+0.04}\ cm\ s^{-2}$ and $-1.14^{+0.21}_{-0.22}\ cm\ s^{-2}$ over a rest-frame time-span of 4.15 yr. We do not see any acceleration-like signature in the red component. This is consistent with dramatic variabilities usually seen at high velocities. During our monitoring period the quasar has shown no strong continuum variability. We suggest the observed variability could be related to the time dependent changes in disk wind parameters like launching radius, initial flow velocity or mass outflow rate., Comment: 10 Pages, 2 Figures, 2 Tables (Accepted for Publication in ApJ main Journal)
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- 2018
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171. Provenance-based Intrusion Detection: Opportunities and Challenges
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Han, Xueyuan, Pasquier, Thomas, and Seltzer, Margo
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Computer Science - Cryptography and Security ,Computer Science - Systems and Control - Abstract
Intrusion detection is an arms race; attackers evade intrusion detection systems by developing new attack vectors to sidestep known defense mechanisms. Provenance provides a detailed, structured history of the interactions of digital objects within a system. It is ideal for intrusion detection, because it offers a holistic, attack-vector-agnostic view of system execution. As such, provenance graph analysis fundamentally strengthens detection robustness. We discuss the opportunities and challenges associated with provenance-based intrusion detection and provide insights based on our experience building such systems., Comment: 4 pages, TaPP'18
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- 2018
172. Excitonic effects in two-dimensional TiSe$_2$ from hybrid density functional theory
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Pasquier, Diego and Yazyev, Oleg V.
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Condensed Matter - Strongly Correlated Electrons ,Condensed Matter - Materials Science - Abstract
Transition metal dichalcogenides (TMDs), whether in bulk or in monolayer form, exhibit a rich variety of charge-density-wave (CDW) phases and stronger periodic lattice distortions. While the actual role of nesting has been under debate, it is well understood that the microscopic interaction responsible for the CDWs is the electron-phonon coupling. The case of TiSe$_2$ is however unique in this family in that the normal state above the critical temperature $T_\mathrm{CDW}$ is characterized by a small quasiparticle bandgap as measured by ARPES, so that no nesting-derived enhancement of the susceptibility is present. It has therefore been argued that the mechanism responsible for this CDW should be different and that this material realizes the excitonic insulator phase proposed by Walter Kohn. On the other hand, it has also been suggested that the whole phase diagram can be explained by a sufficiently strong electron-phonon coupling. In this work, in order to estimate how close this material is to the pure excitonic insulator instability, we quantify the strength of electron-hole interactions by computing the exciton band structure at the level of hybrid density functional theory, focusing on the monolayer. We find that in a certain range of parameters the indirect gap at $q_{\mathrm{CDW}}$ is significantly reduced by excitonic effects. We discuss the consequences of those results regarding the debate on the physical mechanism responsible for this CDW. Based on the dependence of the calculated exciton binding energies as a function of the mixing parameter of hybrid DFT, we conjecture that a necessary condition for a pure excitonic insulator is that its noninteracting electronic structure is metallic., Comment: 6 pages, 3 figures
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- 2018
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173. The science case for POLLUX, a high-resolution UV spectropolarimeter onboard LUVOIR
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Bouret, Jean-Claude, Neiner, Coralie, de Castro, Ana I. Gómez, Evans, Chris, Gaensicke, Boris, Shore, Steve, Fossati, Luca, Gry, Cécile, Charlot, Stéphane, Marin, Frédéric, Noterdaeme, Pasquier, and Chaufray, Jean-Yves
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Astrophysics - Instrumentation and Methods for Astrophysics ,Astrophysics - Cosmology and Nongalactic Astrophysics ,Astrophysics - Earth and Planetary Astrophysics ,Astrophysics - Astrophysics of Galaxies ,Astrophysics - Solar and Stellar Astrophysics - Abstract
POLLUX is a high-resolution, UV spectropolarimeter proposed for the 15-meter primary mirror option of LUVOIR. The instrument Phase 0 study is supported by the French Space Agency (CNES) and performed by a consortium of European scientists. POLLUX has been designed to deliver high-resolution spectroscopy (R> 120,000) over a broad spectral range (90-390 nm). Its unique spectropolarimetric capabilities will open-up a vast new parameter space, in particular in the unexplored UV domain and in a regime where high-resolution observations with current facilities in the visible domain are severely photon starved. POLLUX will address a range of questions at the core of the LUVOIR Science portfolio. The combination of high resolution and broad coverage of the UV bandpass will resolve narrow UV emission and absorption lines originating in diffuse media, thus permitting the study of the baryon cycle over cosmic time: from galaxies forming stars out of interstellar gas and grains, and stars forming planets, to the various forms of feedback into the interstellar and intergalactic medium (ISM and IGM), and active galactic nuclei (AGN). UV circular and linear polarimetry will reveal the magnetic fields for a wide variety of objects for the first time, from AGN outflows to a diverse range of stars, stellar explosions (both supernovae and their remnants), the ISM and IGM. It will enable detection of polarized light reflected from exoplanets (or their circumplanetary material and moons), characterization of the magnetospheres of stars and planets (and their interactions), and measurements of the influence of magnetic fields at the (inter)galactic scale. In this paper, we outline the key science cases of POLLUX, together with its high-level technical requirements. The instrument design, its estimated performances, and the required technology development are presented in a separated paper., Comment: 11 pages, 8 figures
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- 2018
174. Gaia Data Release 2. Calibration and mitigation of electronic offset effects in the data
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Hambly, N. C., Cropper, M., Boudreault, S., Crowley, C., Kohley, R., de Bruijne, J. H. J., Dolding, C., Fabricius, C., Seabroke, G., Davidson, M., Rowell, N., Collins, R., Cross, N., Martin-Fleitas, J., Baker, S., Smith, M., Sartoretti, P., Marchal, O., Katz, D., de Angeli, F., Busso, G., Riello, M., Prieto, C. Allende, Els, S., Corcione, L., Masana, E., Luri, X., Chassat, F., Fusero, F., Pasquier, J. F., Vetel, C., Sarri, G., and Gare, P.
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Astrophysics - Instrumentation and Methods for Astrophysics - Abstract
The European Space Agency Gaia satellite was launched into orbit around L2 in December 2013. This ambitious mission has strict requirements on residual systematic errors resulting from instrumental corrections in order to meet a design goal of sub-10 microarcsecond astrometry. During the design and build phase of the science instruments, various critical calibrations were studied in detail to ensure that this goal could be met in orbit. In particular, it was determined that the video-chain offsets on the analogue side of the analogue-to-digital conversion electronics exhibited instabilities that could not be mitigated fully by modifications to the flight hardware. We provide a detailed description of the behaviour of the electronic offset levels on microsecond timescales, identifying various systematic effects that are known collectively as offset non-uniformities. The effects manifest themselves as transient perturbations on the gross zero-point electronic offset level that is routinely monitored as part of the overall calibration process. Using in-orbit special calibration sequences along with simple parametric models, we show how the effects can be calibrated, and how these calibrations are applied to the science data. While the calibration part of the process is relatively straightforward, the application of the calibrations during science data processing requires a detailed on-ground reconstruction of the readout timing of each charge-coupled device (CCD) sample on each device in order to predict correctly the highly time-dependent nature of the corrections. We demonstrate the effectiveness of our offset non-uniformity models in mitigating the effects in Gaia data. We demonstrate for all CCDs and operating instrument and modes on board Gaia that the video-chain noise-limited performance is recovered in the vast majority of science samples., Comment: 20 pages, 30 figures, accepted for publication in Astronomy and Astrophysics
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- 2018
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175. Eclipsing damped Ly$\alpha$ systems in the Sloan Digital Sky Survey Data Release 12
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Fathivavsari, Hassan, Petitjean, Patrick, Jamialahmadi, Narges, Khosroshahi, Habib G., Rahmani, Hadi, Finley, Hayley, Noterdaeme, Pasquier, Pâris, Isabelle, and Srianand, Raghunathan
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Astrophysics - Astrophysics of Galaxies ,Astrophysics - Cosmology and Nongalactic Astrophysics - Abstract
We present the results of our automatic search for proximate damped Ly$\alpha$ absorption (PDLA) systems in the quasar spectra from the Sloan Digital Sky Survey Data Release 12. We constrain our search to those PDLAs lying within 1500 km s$^{-1}$ from the quasar to make sure that the broad DLA absorption trough masks most of the strong Ly$\alpha$ emission from the broad line region (BLR) of the quasar. When the Ly$\alpha$ emission from the BLR is blocked by these so-called eclipsing DLAs, narrow Ly$\alpha$ emission from the host galaxy could be revealed as a narrow emission line (NEL) in the DLA trough. We define a statistical sample of 399 eclipsing DLAs with log$N$(HI)$\ge$21.10. We divide our statistical sample into three subsamples based on the strength of the NEL detected in the DLA trough. By studying the stacked spectra of these subsamples, we found that absorption from high ionization species are stronger in DLAs with stronger NEL in their absorption core. Moreover, absorption from the excited states of species like SiII are also stronger in DLAs with stronger NEL. We also found no correlation between the luminosity of the Ly$\alpha$ NEL and the quasar luminosity. These observations are consistent with a scenario in which the DLAs with stronger NEL are denser and physically closer to the quasar. We propose that these eclipsing DLAs could be the product of the interaction between infalling and outflowing gas. High resolution spectroscopic observation would be needed to shed some light on the nature of these eclipsing DLAs., Comment: Accepted for publication in MNRAS, 16 pages, 20 figures, 3 tables. Full version of Tables 1 and 2 can be accessed via http://cdsarc.u-strasbg.fr/viz-bin/qcat?J/MNRAS
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- 2018
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176. Constraining the H$_2$ column density distribution at z$\sim$3 from composite DLA spectra
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Balashev, Sergei and Noterdaeme, Pasquier
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Astrophysics - Astrophysics of Galaxies ,Astrophysics - Cosmology and Nongalactic Astrophysics - Abstract
We present the detection of the average H$_2$ absorption signal in the overall population of neutral gas absorption systems at $z\sim 3$ using composite absorption spectra built from the Sloan Digital Sky Survey-III damped Lyman-$\alpha$ catalogue. We present a new technique to directly measure the H$_2$ column density distribution function $f_{\rm H_2}(N)$ from the average H$_2$ absorption signal. Assuming a power-law column density distribution, we obtain a slope $\beta = -1.29 \pm 0.06(\rm stat) \pm 0.10 (\rm sys)$ and an incidence rate of strong H$_2$ absorptions (with $N$(H$_2)\gtrsim 10^{18}\,$cm$^{-2}$) to be $4.0 \pm 0.5(\rm stat) \pm 1.0 (\rm sys)\,\%$ in H$\,$I absorption systems with $N($H$\,$I)$\ge 10^{20}\,$cm$^{-2}$. Assuming the same inflexion point where $f_{\rm H_2}(N)$ steepens as at $z=0$, we estimate that the cosmological density of H$_2$ in the column density range $\log N(\rm H_2)$(cm$^{-2})= 18-22$ is $\sim 15\%$ of the total. We find one order of magnitude higher H$_2$ incident rate in a sub-sample of extremely strong DLAs ($\log N($H$\,$I)(cm$^{-2}) \ge 21.7$), which, together with the the derived shape of $f_{\rm H_2}(N)$, suggests that the typical H$\,$I-H$_2$ transition column density in DLAs is $\log N({\rm H})$(cm$^{-2}) \gtrsim 22.3$ in agreement with theoretical expectations for the average (low) metallicity of DLAs at high-$z$., Comment: 6 pages, 3 figures, accepted for publication in MNRAS letters
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- 2018
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177. Solution of Baxter equation for the $q$-Toda and Toda$_2$ chains by NLIE
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Babelon, O., Kozlowski, K. K., and Pasquier, V.
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Mathematical Physics ,Nonlinear Sciences - Exactly Solvable and Integrable Systems - Abstract
We construct a basis of solutions of the scalar $\boldsymbol{ \texttt{t} }- \boldsymbol{ \texttt{Q} }$ equation describing the spectrum of the $q$-Toda and Toda$_2$ chains by using auxiliary non-linear integral equations. Our construction allows us to provide quantisation conditions for the spectra of these models in the form of thermodynamic Bethe Ansatz-like equations., Comment: 37 pages,1 figure, V3 minor corrections
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- 2018
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178. RESERVOIR PROPERTIES OF BARREMIAN – APTIAN URGONIAN LIMESTONES, SE FRANCE, PART 1: INFLUENCE OF STRUCTURAL HISTORY ON POROSITY‐PERMEABILITY VARIATIONS
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Cochard, J, Léonide, P, Borgomano, J, Guglielmi, Y, Massonnat, G, Rolando, J‐P, Marié, L, and Pasquier, A
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Geology ,Resources Engineering and Extractive Metallurgy ,Energy - Abstract
Upper Barremian – Lower Aptian inner platform “Urgonian” limestones in the Mont de Vaucluse region, SE France, consist of alternating metre-scale microporous and tight intervals. This paper focuses on the influence of structural deformation on the reservoir properties of the Urgonian limestone succession in a study area near the town of Rustrel. Petrographic, petrophysical and structural data were recovered from five fully-cored boreholes, from the walls of a 100 m long underground tunnel, and from a 50 m long transect at a nearby outcrop. The data allowed reservoir property variations in the Urgonian limestones to be studied from core to reservoir scale. Eleven Reservoir Rock Types (RRTs) were identified based on petrographic features (texture, grain size), reservoir properties (porosity, permeability), and the frequency of structural discontinuities such as fractures, faults and stylolites. Tight and microporous reservoir rock types were distinguished. Tight reservoir rock types were characterised by early cementation of intergranular pore spaces and by the presence of frequent structural discontinuities. By contrast microporous reservoir rock types contained preserved intragranular microporosity and matrix permeability, but had very few structural discontinuities. Observed vertical alternations of microporous and tight rock types are interpreted to have been controlled by the early diagenesis of the Urgonian carbonates. Deformation associated with regional-scale tectonic phases, including Albian – Cenomanian “Durancian” uplift (∼105 to 96 Ma) and Pyrenean compression (∼55 to 25 Ma), resulted in the modification of the initial petrophysical properties of the Urgonian limestones. An early diagenetic imprint conditioned both the intensity of structural deformations and the associated circulations of diagenetic and meteoric fluids. Evolution of the Reservoir Rock Types is therefore linked both to the depositional conditions and to subsequent phases of structural deformation.
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- 2020
179. Partial Loss of USP9X Function Leads to a Male Neurodevelopmental and Behavioral Disorder Converging on Transforming Growth Factor β Signaling.
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Johnson, Brett V, Kumar, Raman, Oishi, Sabrina, Alexander, Suzy, Kasherman, Maria, Vega, Michelle Sanchez, Ivancevic, Atma, Gardner, Alison, Domingo, Deepti, Corbett, Mark, Parnell, Euan, Yoon, Sehyoun, Oh, Tracey, Lines, Matthew, Lefroy, Henrietta, Kini, Usha, Van Allen, Margot, Grønborg, Sabine, Mercier, Sandra, Küry, Sébastien, Bézieau, Stéphane, Pasquier, Laurent, Raynaud, Martine, Afenjar, Alexandra, Billette de Villemeur, Thierry, Keren, Boris, Désir, Julie, Van Maldergem, Lionel, Marangoni, Martina, Dikow, Nicola, Koolen, David A, VanHasselt, Peter M, Weiss, Marjan, Zwijnenburg, Petra, Sa, Joaquim, Reis, Claudia Falcao, López-Otín, Carlos, Santiago-Fernández, Olaya, Fernández-Jaén, Alberto, Rauch, Anita, Steindl, Katharina, Joset, Pascal, Goldstein, Amy, Madan-Khetarpal, Suneeta, Infante, Elena, Zackai, Elaine, Mcdougall, Carey, Narayanan, Vinodh, Ramsey, Keri, Mercimek-Andrews, Saadet, Pena, Loren, Shashi, Vandana, Undiagnosed Diseases Network, Schoch, Kelly, Sullivan, Jennifer A, Pinto E Vairo, Filippo, Pichurin, Pavel N, Ewing, Sarah A, Barnett, Sarah S, Klee, Eric W, Perry, M Scott, Koenig, Mary Kay, Keegan, Catherine E, Schuette, Jane L, Asher, Stephanie, Perilla-Young, Yezmin, Smith, Laurie D, Rosenfeld, Jill A, Bhoj, Elizabeth, Kaplan, Paige, Li, Dong, Oegema, Renske, van Binsbergen, Ellen, van der Zwaag, Bert, Smeland, Marie Falkenberg, Cutcutache, Ioana, Page, Matthew, Armstrong, Martin, Lin, Angela E, Steeves, Marcie A, Hollander, Nicolette den, Hoffer, Mariëtte JV, Reijnders, Margot RF, Demirdas, Serwet, Koboldt, Daniel C, Bartholomew, Dennis, Mosher, Theresa Mihalic, Hickey, Scott E, Shieh, Christine, Sanchez-Lara, Pedro A, Graham, John M, Tezcan, Kamer, Schaefer, GB, Danylchuk, Noelle R, Asamoah, Alexander, Jackson, Kelly E, Yachelevich, Naomi, Au, Margaret, Pérez-Jurado, Luis A, and Kleefstra, Tjitske
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Undiagnosed Diseases Network ,Animals ,Humans ,Mice ,Ubiquitin Thiolesterase ,Transforming Growth Factor beta ,Developmental Disabilities ,Signal Transduction ,Phenotype ,Female ,Male ,Haploinsufficiency ,Intellectual Disability ,Brain malformation ,Deubiquitylating enzyme ,Hippocampus ,Neurodevelopmental disorder ,TGFβ ,USP9X ,Congenital Structural Anomalies ,Genetics ,Neurosciences ,Pediatric ,Mental Health ,Behavioral and Social Science ,Brain Disorders ,Clinical Research ,2.1 Biological and endogenous factors ,Aetiology ,Neurological ,TGF beta ,Biological Sciences ,Medical and Health Sciences ,Psychology and Cognitive Sciences ,Psychiatry - Abstract
BackgroundThe X-chromosome gene USP9X encodes a deubiquitylating enzyme that has been associated with neurodevelopmental disorders primarily in female subjects. USP9X escapes X inactivation, and in female subjects de novo heterozygous copy number loss or truncating mutations cause haploinsufficiency culminating in a recognizable syndrome with intellectual disability and signature brain and congenital abnormalities. In contrast, the involvement of USP9X in male neurodevelopmental disorders remains tentative.MethodsWe used clinically recommended guidelines to collect and interrogate the pathogenicity of 44 USP9X variants associated with neurodevelopmental disorders in males. Functional studies in patient-derived cell lines and mice were used to determine mechanisms of pathology.ResultsTwelve missense variants showed strong evidence of pathogenicity. We define a characteristic phenotype of the central nervous system (white matter disturbances, thin corpus callosum, and widened ventricles); global delay with significant alteration of speech, language, and behavior; hypotonia; joint hypermobility; visual system defects; and other common congenital and dysmorphic features. Comparison of in silico and phenotypical features align additional variants of unknown significance with likely pathogenicity. In support of partial loss-of-function mechanisms, using patient-derived cell lines, we show loss of only specific USP9X substrates that regulate neurodevelopmental signaling pathways and a united defect in transforming growth factor β signaling. In addition, we find correlates of the male phenotype in Usp9x brain-specific knockout mice, and further resolve loss of hippocampal-dependent learning and memory.ConclusionsOur data demonstrate the involvement of USP9X variants in a distinctive neurodevelopmental and behavioral syndrome in male subjects and identify plausible mechanisms of pathogenesis centered on disrupted transforming growth factor β signaling and hippocampal function.
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- 2020
180. Les actions du service de santé des armées face à la crise COVID-19: sur mer et au-delà des mers, toujours au service des hommes !
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Pasquier, P., Danguy des Déserts, M., Meaudre, E., and Escarment, J.
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- 2022
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181. Prevalence and clinical significance of point of care elevated lactate at emergency admission in older patients: a prospective study
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Gosselin, Mélanie, Mabire, Cédric, Pasquier, Mathieu, Carron, Pierre-Nicolas, Hugli, Olivier, Ageron, Françcois-Xavier, and Dami, Fabrice
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- 2022
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182. Anomia is present pre-symptomatically in frontotemporal dementia due to MAPT mutations
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Bouzigues, Arabella, Russell, Lucy L., Peakman, Georgia, Bocchetta, Martina, Greaves, Caroline V., Convery, Rhian S., Todd, Emily, Rowe, James B., Borroni, Barbara, Galimberti, Daniela, Tiraboschi, Pietro, Masellis, Mario, Tartaglia, Maria Carmela, Finger, Elizabeth, van Swieten, John C., Seelaar, Harro, Jiskoot, Lize, Sorbi, Sandro, Butler, Chris R., Graff, Caroline, Gerhard, Alexander, Langheinrich, Tobias, Laforce, Robert, Sanchez-Valle, Raquel, de Mendonça, Alexandre, Moreno, Fermin, Synofzik, Matthis, Vandenberghe, Rik, Ducharme, Simon, Le Ber, Isabelle, Levin, Johannes, Danek, Adrian, Otto, Markus, Pasquier, Florence, Santana, Isabel, and Rohrer, Jonathan D.
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- 2022
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183. Informing relatives of their genetic risk: an examination of the Belgian legal context
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Phillips, Amicia, Bronselaer, Thomas, Borry, Pascal, Van Hoyweghen, Ine, Vears, Danya F., Pasquier, Laurent, and Callens, Stefaan
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- 2022
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184. Charge-density-wave phase, mottness and ferromagnetism in monolayer $1T$-NbSe$_2$
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Pasquier, Diego and Yazyev, Oleg V.
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Condensed Matter - Strongly Correlated Electrons - Abstract
The recently investigated $1T$-polymorph of monolayer NbSe$_2$ revealed an insulating behaviour suggesting a star-of-David phase with $\sqrt{13}\,\times\sqrt{13}$ periodicity associated with a Mott insulator, reminiscent of $1T$-TaS$_2$. In this work, we examine this novel two-dimensional material from first principles. We find an instability towards the formation of an incommensurate charge-density-wave (CDW) and establish the star-of-David phase as the most stable commensurate CDW. The mottness in the star-of-David phase is confirmed and studied at various levels of theory: the spin-polarized generalized gradient approximation (GGA) and its extension involving the on-site Coulomb repulsion (GGA+$U$), as well as the dynamical mean-field theory (DMFT). Finally, we estimate Heisenberg exchange couplings in this material and find a weak nearest-neighbour ferromagnetic coupling, at odds with most Mott insulators. We point out the close resemblance between this star-of-David phase and flat-band ferromagnetism models.
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- 2018
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185. Baxter operator and Baxter equation for $q$-Toda and Toda$_2$ chains
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Babelon, O., Kozlowski, K. K., and Pasquier, V.
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Mathematical Physics ,Nonlinear Sciences - Exactly Solvable and Integrable Systems - Abstract
We construct the Baxter operator $\boldsymbol{ \texttt{Q} }(\lambda)$ for the $q$-Toda chain and the Toda$_2$ chain (the Toda chain in the second Hamiltonian structure). Our construction builds on the relation between the Baxter operator and B\"acklund transformations that were unravelled in {\cite{GaPa92}}. We construct a number of quantum intertwiners ensuring the commutativity of $\boldsymbol{ \texttt{Q} }(\lambda)$ with the transfer matrix of the models and the one of $\boldsymbol{ \texttt{Q} }$'s between each other. Most importantly, $\boldsymbol{ \texttt{Q} }(\lambda)$ is modular invariant in the sense of Faddeev. We derive the Baxter equation for the eigenvalues $q(\lambda)$ of $\boldsymbol{ \texttt{Q} }(\lambda)$ and show that these are entire functions of $\lambda$. This last property will ultimately lead to the quantisation of the spectrum for the considered Toda chains, in a subsequent publication., Comment: 31 pages
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- 2018
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186. Sharing and Preserving Computational Analyses for Posterity with encapsulator
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Pasquier, Thomas, Lau, Matthew K., Han, Xueyuan, Fong, Elizabeth, Lerner, Barbara S., Boose, Emery, Crosas, Merce, Ellison, Aaron M., and Seltzer, Margo
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Computer Science - Digital Libraries - Abstract
Open data and open-source software may be part of the solution to science's "reproducibility crisis", but they are insufficient to guarantee reproducibility. Requiring minimal end-user expertise, encapsulator creates a "time capsule" with reproducible code in a self-contained computational environment. encapsulator provides end-users with a fully-featured desktop environment for reproducible research., Comment: 11 pages, 6 figures
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- 2018
187. The Toda$_2$ chain
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Babelon, O., Kozlowski, K. K., and Pasquier, V.
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Mathematical Physics ,Nonlinear Sciences - Exactly Solvable and Integrable Systems - Abstract
We show that a natural discretisation of Virasoro algebra yields a quantum integrable model which is the Toda chain in the second Hamiltonian structure., Comment: 12 pages
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- 2018
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188. Matrix product solutions to the reflection equation from three dimensional integrability
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Kuniba, Atsuo and Pasquier, Vincent
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Mathematical Physics ,Mathematics - Quantum Algebra ,Nonlinear Sciences - Exactly Solvable and Integrable Systems ,17B37, 17B80 - Abstract
We formulate a quantized reflection equation in which $q$-boson valued $L$ and $K$ matrices satisfy the reflection equation up to conjugation by a solution to the Isaev-Kulish 3D reflection equation. By forming its $n$-concatenation along the $q$-boson Fock space followed by suitable reductions, we construct families of solutions to the reflection equation in a matrix product form connected to the 3D integrability. They involve the quantum $R$ matrices of the antisymmetric tensor representations of $U_p(A^{(1)}_{n-1})$ and the spin representations of $U_p(B^{(1)}_{n})$, $U_p(D^{(1)}_{n})$ and $U_p(D^{(2)}_{n+1})$., Comment: 20 pages, minor corrections in Eq.(96)
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- 2018
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189. Average [O II] nebular emission associated with Mg II absorbers: Dependence on Fe II absorption
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Joshi, Ravi, Srianand, Raghunathan, Petitjean, Patrick, and Noterdaeme, Pasquier
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Astrophysics - Astrophysics of Galaxies - Abstract
We investigate the effect of Fe II equivalent width ($W_{2600}$) and fibre size on the average luminosity of [O II]$\lambda\lambda$3727,3729 nebular emission associated with Mg II absorbers (at $0.55 \le z \le 1.3$) in the composite spectra of quasars obtained with 3 and 2 arcsec fibres in the Sloan Digital Sky Survey. We confirm the presence of strong correlations between [O II] luminosity (L$_{[\rm O~II]}$) and equivalent width ($W_{2796}$) and redshift of Mg II absorbers. However, we show L$_{[\rm O~II]}$ and average luminosity surface density suffers from fibre size effects. More importantly, for a given fibre size the average L$_{[\rm O~II]}$ strongly depends on the equivalent width of Fe II absorption lines and found to be higher for Mg II absorbers with $R \equiv$ $W_{\rm 2600}/W_{\rm 2796}$ $\ge 0.5$. In fact, we show the observed strong correlations of L$_{[\rm O~II]}$ with $W_{2796}$ and $z$ of Mg II absorbers are mainly driven by such systems. Direct [O II] detections also confirm the link between L$_{[\rm O~II]}$ and $R$. Therefore, one has to pay attention to the fibre losses and dependence of redshift evolution of Mg II absorbers on $W_{2600}$ before using them as a luminosity unbiased probe of global star formation rate density. We show that the [O II] nebular emission detected in the stacked spectrum is not dominated by few direct detections (i.e., detections $\ge 3 \sigma$ significant level). On an average the systems with $R$ $\ge 0.5$ and $W_{2796}$ $\ge 2$ \AA\ are more reddened, showing colour excess E($B-V$) $\sim$ 0.02, with respect to the systems with $R$ $< 0.5$ and most likely traces the high H I column density systems., Comment: 16 Pages, 5 Tables, 13 Figures (Accepted for the publication in MNRAS main Journal)
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- 2018
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190. A metal-line strength indicator for Damped Lyman Alpha (DLA) systems at low signal-to-noise
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Arinyo-i-Prats, Andreu, Mas-Ribas, Lluis, Miralda-Escude, Jordi, Perez-Rafols, Ignasi, and Noterdaeme, Pasquier
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Astrophysics - Astrophysics of Galaxies ,Astrophysics - Cosmology and Nongalactic Astrophysics - Abstract
The Baryon Oscillation Spectroscopic Survey of SDSS-III has provided an unprecedentedly large sample of Damped \lya systems (DLAs), the largest repositories of neutral hydrogen in the Universe. This DLA sample has been used to determine the DLA bias factor from their cross-correlation with the \lya forest absorption in \cite{FontRibera2012,Perez2018}, showing that DLAs are associated with relatively massive halos. However, the low resolution and signal-to-noise of BOSS spectra do not allow precise measurements of the DLA metal lines. We define a metal strength parameter, $S$, based on combining equivalent widths of 17 metal lines, that can be measured with an optimal signal-to-noise ratio for individual DLAs in BOSS spectra, allowing for the classification of the DLA population into subgroups of different $S$. We present the distribution of this DLA metal strength and the dependence of its mean value on $N_{\rm HI}$ and redshift. We search for systematic effects and variations in the catalogue purity by examining the dependence of the $S$ distribution on the spectral signal-to-noise and the estimated error on $S$. A catalogue of DLAs with measured equivalent widths for the selected 17 metal lines and the value of $S$ is made publicly available, which will be used to measure the dependence of the DLA bias factor on the $S$ parameter. The relation of the metal strength on the gas metal abundances and velocity dispersion can be constrained by studying the stacked metal absorption spectra of DLAs as a function of $S$, allowing for future determinations of the dependence of the bias factor on the metallicity and velocity dispersion of DLAs., Comment: 12 pages, 10 figures, link to online catalogue (https://github.com/andreuandreu/Catalogue_Metal_Strength_DLAs_SDSS-BOSS_DR12)
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- 2018
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191. OCTOPUS: A retrospective, multicenter study of real-world cabozantinib treatment of patients with advanced renal cell carcinoma in France—Subgroup analyses of treatment sequences and optimization.
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Thibault, Constance, Mourey, Loic, Pasquier, David, Bernhard, Jean-Christophe, Bennamoun, Mostefa, Bigot, Pierre, Billemont, Bertrand, Jaffrelot, Loïc, Narciso, Bérengère, Ryckewaert, Thomas, Sajous, Christophe, Topart, Delphine, Vinceneux, Armelle, Boissier, Marion, Perrot, Valérie, and Albiges, Laurence
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- 2025
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192. Classification of myo-connective tissue injuries for severity grading and return to play prediction: A scoping review.
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Fontanier, Vincent, Bruchard, Arnaud, Tremblay, Mathieu, Mohammed, Riaz, da Silva-Oolup, Sophia, Suri-Chilana, Minisha, Pasquier, Mégane, Hachem, Sarah, Meyer, Anne-Laure, Honoré, Margaux, Vigne, Grégory, Bermon, Stéphane, Murnaghan, Kent, and Lemeunier, Nadège
- Abstract
To conduct a systematic literature search to identify currently used classifications of acute non-contact muscle injuries in sporting adults. Scoping review. A systematic literature search from January 1, 2010 to April 19, 2022 of Medline and SPORTDiscus yielded 13,426 articles that were screened for eligibility. Findings from included studies were qualitatively synthesized. Classifications and their grading, as well as outcomes and definitions were extracted. Twenty-four classifications were identified from the 37 included studies, most of which had low evidence study designs. Majority (57 %) of classifications were published after 2009 and were mostly developed for hamstring or other lower limb injuries. The six most cited classifications accounted for 70 % of the reports (BAMIC, modified Peetrons, Munich, Cohen, Chan and MLG-R). Outcome reporting was sparse, making it difficult to draw conclusions. Still, significant relationships between grading and time to return to play were reported for the BAMIC, modified Peetrons, Munich and Cohen classifications. Other classifications either had a very low number of reported associations, reported no associations, reported inconclusive associations, or did not report an assessment of the association. Other outcomes were poorly investigated. There is no agreed-upon use of muscle classification, and no consensus on definitions and terminology. As a result, reported outcomes and their relationship to severity grading are inconsistent across studies. There is a need to improve the generalizability and applicability of existing classifications and to refine their prognostic value. High-level evidence studies are needed to resolve these inconsistencies. [ABSTRACT FROM AUTHOR]
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- 2025
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193. FRAPpuccino: Fault-detection through Runtime Analysis of Provenance
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Han, Xueyuan, Pasquier, Thomas, Ranjan, Tanvi, Goldstein, Mark, and Seltzer, Margo
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Computer Science - Systems and Control ,Computer Science - Cryptography and Security - Abstract
We present FRAPpuccino (or FRAP), a provenance-based fault detection mechanism for Platform as a Service (PaaS) users, who run many instances of an application on a large cluster of machines. FRAP models, records, and analyzes the behavior of an application and its impact on the system as a directed acyclic provenance graph. It assumes that most instances behave normally and uses their behavior to construct a model of legitimate behavior. Given a model of legitimate behavior, FRAP uses a dynamic sliding window algorithm to compare a new instance's execution to that of the model. Any instance that does not conform to the model is identified as an anomaly. We present the FRAP prototype and experimental results showing that it can accurately detect application anomalies., Comment: 7 pages, 2 figures, 1 table
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- 2017
194. Practical Whole-System Provenance Capture
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Pasquier, Thomas, Han, Xueyuan, Goldstein, Mark, Moyer, Thomas, Eyers, David, Seltzer, Margo, and Bacon, Jean
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Computer Science - Cryptography and Security - Abstract
Data provenance describes how data came to be in its present form. It includes data sources and the transformations that have been applied to them. Data provenance has many uses, from forensics and security to aiding the reproducibility of scientific experiments. We present CamFlow, a whole-system provenance capture mechanism that integrates easily into a PaaS offering. While there have been several prior whole-system provenance systems that captured a comprehensive, systemic and ubiquitous record of a system's behavior, none have been widely adopted. They either A) impose too much overhead, B) are designed for long-outdated kernel releases and are hard to port to current systems, C) generate too much data, or D) are designed for a single system. CamFlow addresses these shortcoming by: 1) leveraging the latest kernel design advances to achieve efficiency; 2) using a self-contained, easily maintainable implementation relying on a Linux Security Module, NetFilter, and other existing kernel facilities; 3) providing a mechanism to tailor the captured provenance data to the needs of the application; and 4) making it easy to integrate provenance across distributed systems. The provenance we capture is streamed and consumed by tenant-built auditor applications. We illustrate the usability of our implementation by describing three such applications: demonstrating compliance with data regulations; performing fault/intrusion detection; and implementing data loss prevention. We also show how CamFlow can be leveraged to capture meaningful provenance without modifying existing applications., Comment: 15 pages, 7 figures
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- 2017
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195. Near Infrared spectroscopic observations of high redshift C~{\sc i} absorbers
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Zou, Siwei, Petitjean, Patrick, Noterdaeme, Pasquier, Ledoux, Cédric, Krogager, Jens-Kristian, Fathivavsari, Hassan, Srianand, Raghunathan, and López, Sebastian
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Astrophysics - Astrophysics of Galaxies - Abstract
We study a sample of 17 z>1.5 absorbers selected based on the presence of strong CI absorption lines in SDSS spectra and observed with the ESO-VLT spectrograph X-shooter. We derive metallicities, depletion onto dust, and extinction by dust, and analyse the absorption from MgII, MgI, CaII and NaI that are redshifted into the near infrared wavelength range. We show that most of these CI absorbers have high metallicity and dust content. We detect nine CaII absorptions with $W$(CaII$\lambda$3934) >0.23 \AA out of 14 systems where we have appropriate wavelength coverage. The observed equivalent widths are similar to what has been measured in other lower redshift surveys of CaII systems. We detect ten NaI absorptions in the 11 systems where we could observe this absorption. The median equivalent width ($W$(NaI$\lambda$5891) = 0.68 \AA) is larger than what is observed in local clouds with similar HI column densities but also in z<0.7 CaII systems detected in the SDSS. The systematic presence of NaI absorption in these CI systems strongly suggests that the gas is neutral and cold, maybe part of the diffuse molecular gas in the ISM of high-redshift galaxies. Most of the systems (12 out of 17) have $W$(MgII$\lambda$2796) > 2.5 \AA and six of them have log N(HI) < 20.3, with the extreme case of J1341+1852 that has log N(HI) = 18.18. The MgII absorptions are spread over more than $\Delta v$ $\sim$ 400 km s$^{-1}$ for half of the systems; three absorbers have $\Delta v$ > 500 km s$^{-1}$. The kinematics are strongly perturbed for most of these systems, which probably do not arise in quiet disks and must be close to regions with intense star-formation activity and/or are part of interacting objects. All this suggests that a large fraction of the cold gas at high redshift arises in disturbed environments., Comment: 26 pages, 49 figures, 3 tables, accepted by Astronomy & Astrophysics (A&A)
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- 2017
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196. The SDSS-DR12 large-scale cross-correlation of Damped Lyman Alpha Systems with the Lyman Alpha Forest
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Pérez-Ràfols, Ignasi, Font-Ribera, Andreu, Miralda-Escudé, Jordi, Blomqvist, Michael, Bird, Simeon, Busca, Nicolás, Bourboux, Hélion du Mas des, Mas-Ribas, Lluís, Noterdaeme, Pasquier, Petitjean, Patrick, Rich, James, and Schneider, Donald P.
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Astrophysics - Cosmology and Nongalactic Astrophysics - Abstract
We present a measurement of the DLA mean bias from the cross-correlation of DLA and the Ly$\alpha$ forest, updating earlier results of Font-Ribera et al. 2012 with the final BOSS Data Release and an improved method to address continuum fitting corrections. Our cross-correlation is well fitted by linear theory with the standard $\Lambda CDM$ model, with a DLA bias of $b_{\rm DLA} = 1.99\pm 0.11$; a more conservative analysis, which removes DLA in the Ly$\beta$ forest and uses only the cross-correlation at $r> 10{\rm h^{-1}\,Mpc}$, yields $b_{\rm DLA} = 2.00\pm 0.19$. This assumes the cosmological model from \cite{Planck2015} and the Ly$\alpha$ forest bias factors of Bautista et al. 2017, and includes only statistical errors obtained from bootstrap analysis. The main systematic errors arise from possible impurities and selection effects in the DLA catalogue, and from uncertainties in the determination of the Ly$\alpha$ forest bias factors and a correction for effects of high column density absorbers. We find no dependence of the DLA bias on column density or redshift. The measured bias value corresponds to a host halo mass $\sim 4\cdot10^{11} {\rm M_{\odot}}$ if all DLA were hosted in halos of a similar mass. In a realistic model where host halos over a broad mass range have a DLA cross section $\Sigma(M_h) \propto M_h^{\alpha}$ down to $M_h > M_{\rm min} =10^{8.5} {\rm M_{\odot}}$, we find that $\alpha > 1$ is required to have $b_{\rm DLA}> 1.7$, implying a steeper relation or higher value of $M_{\rm min}$ than is generally predicted in numerical simulations of galaxy formation., Comment: accepted to MNRAS, 23 pages, 8 figures, 4 tables
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- 2017
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197. Baryon acoustic oscillations from the complete SDSS-III Ly$\alpha$-quasar cross-correlation function at $z=2.4$
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Bourboux, Hélion du Mas des, Goff, Jean-Marc Le, Blomqvist, Michael, Busca, Nicolás G., Guy, Julien, Rich, James, Yèche, Christophe, Bautista, Julian E., Burtin, Étienne, Dawson, Kyle S., Eisenstein, Daniel J., Font-Ribera, Andreu, Kirkby, David, Miralda-Escudé, Jordi, Noterdaeme, Pasquier, Pâris, Isabelle, Petitjean, Patrick, Pérez-Ràfols, Ignasi, Pieri, Matthew M., Ross, Nicholas P., Schlegel, David J., Schneider, Donald P., Slosar, Anže, Weinberg, David H., and Zarrouk, Pauline
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Astrophysics - Cosmology and Nongalactic Astrophysics - Abstract
We present a measurement of baryon acoustic oscillations (BAO) in the cross-correlation of quasars with the Ly$\alpha$-forest flux-transmission at a mean redshift $z=2.40$. The measurement uses the complete SDSS-III data sample: 168,889 forests and 234,367 quasars from the SDSS Data Release DR12. In addition to the statistical improvement on our previous study using DR11, we have implemented numerous improvements at the analysis level allowing a more accurate measurement of this cross-correlation. We also developed the first simulations of the cross-correlation allowing us to test different aspects of our data analysis and to search for potential systematic errors in the determination of the BAO peak position. We measure the two ratios $D_{H}(z=2.40)/r_{d} = 9.01 \pm 0.36$ and $D_{M}(z=2.40)/r_{d} = 35.7 \pm 1.7$, where the errors include marginalization over the non-linear velocity of quasars and the metal - quasar cross-correlation contribution, among other effects. These results are within $1.8\sigma$ of the prediction of the flat-$\Lambda$CDM model describing the observed CMB anisotropies. We combine this study with the Ly$\alpha$-forest auto-correlation function [2017A&A...603A..12B], yielding $D_{H}(z=2.40)/r_{d} = 8.94 \pm 0.22$ and $D_{M}(z=2.40)/r_{d} = 36.6 \pm 1.2$, within $2.3\sigma$ of the same flat-$\Lambda$CDM model., Comment: accepted by A&A
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- 2017
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198. The Fourteenth Data Release of the Sloan Digital Sky Survey: First Spectroscopic Data from the extended Baryon Oscillation Spectroscopic Survey and from the second phase of the Apache Point Observatory Galactic Evolution Experiment
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Abolfathi, Bela, Aguado, D. S., Aguilar, Gabriela, Prieto, Carlos Allende, Almeida, Andres, Ananna, Tonima Tasnim, Anders, Friedrich, Anderson, Scott F., Andrews, Brett H., Anguiano, Borja, Aragon-Salamanca, Alfonso, Argudo-Fernandez, Maria, Armengaud, Eric, Ata, Metin, Aubourg, Eric, Avila-Reese, Vladimir, Badenes, Carles, Bailey, Stephen, Balland, Christophe, Barger, Kathleen A., Barrera-Ballesteros, Jorge, Bartosz, Curtis, Bastien, Fabienne, Bates, Dominic, Baumgarten, Falk, Bautista, Julian, Beaton, Rachael, Beers, Timothy C., Belfiore, Francesco, Bender, Chad F., Bernardi, Mariangela, Bershady, Matthew A., Beutler, Florian, Bird, Jonathan C., Bizyaev, Dmitry, Blanc, Guillermo A., Blanton, Michael R., Blomqvist, Michael, Bolton, Adam S., Boquien, Mederic, Borissova, Jura, Bovy, Jo, Diaz, Christian Andres Bradna, Brandt, William Nielsen, Brinkmann, Jonathan, Brownstein, Joel R., Bundy, Kevin, Burgasser, Adam J., Burtin, Etienne, Busca, Nicolas G., Canas, Caleb I., Cano-Diaz, Mariana, Cappellari, Michele, Carrera, Ricardo, Casey, Andrew R., Sodi, Bernardo Cervantes, Chen, Yanping, Cherinka, Brian, Chiappini, Cristina, Choi, Peter Doohyun, Chojnowski, Drew, Chuang, Chia-Hsun, Chung, Haeun, Clerc, Nicolas, Cohen, Roger E., Comerford, Julia M., Comparat, Johan, Nascimento, Janaina Correa do, da Costa, Luiz, Cousinou, Marie-Claude, Covey, Kevin, Crane, Jeffrey D., Cruz-Gonzalez, Irene, Cunha, Katia, Ilha, Gabriele da Silva, Damke, Guillermo J., Darling, Jeremy, Davidson Jr., James W., Dawson, Kyle, Lizaola, Miguel Angel C. de Icaza, de la Macorra, Axel, de la Torre, Sylvain, De Lee, Nathan, Agathe, Victoria de Sainte, Machado, Alice Deconto, Dell'Agli, Flavia, Delubac, Timothee, Diamond-Stanic, Aleksandar M., Donor, John, Downes, Juan Jose, Drory, Niv, Bourboux, Helion du Mas des, Duckworth, Christopher J., Dwelly, Tom, Dyer, Jamie, Ebelke, Garrett, Eigenbrot, Arthur Davis, Eisenstein, Daniel J., Elsworth, Yvonne P., Emsellem, Eric, Eracleous, Mike, Erfanianfar, Ghazaleh, Escoffier, Stephanie, Fan, Xiaohui, Alvar, Emma Fernandez, Fernandez-Trincado, J. G., Cirolini, Rafael Fernando, Feuillet, Diane, Finoguenov, Alexis, Fleming, Scott W., Font-Ribera, Andreu, Freischlad, Gordon, Frinchaboy, Peter, Fu, Hai, Chew, Yilen Gomez Maqueo, Galbany, Lluis, Perez, Ana E. Garcia, Garcia-Dias, R., Garcia-Hernandez, D. A., Oehmichen, Luis Alberto Garma, Gaulme, Patrick, Gelfand, Joseph, Gil-Marin, Hector, Gillespie, Bruce A., Goddard, Daniel, Hernandez, Jonay I. Gonzalez, Gonzalez-Perez, Violeta, Grabowski, Kathleen, Green, Paul J., Grier, Catherine J., Gueguen, Alain, Guo, Hong, Guy, Julien, Hagen, Alex, Hall, Patrick, Harding, Paul, Hasselquist, Sten, Hawley, Suzanne, Hayes, Christian R., Hearty, Fred, Hekker, Saskia, Hernandez, Jesus, Toledo, Hector Hernandez, Hogg, David W., Holley-Bockelmann, Kelly, Holtzman, Jon, Hou, Jiamin, Hsieh, Bau-Ching, Hunt, Jason A. S., Hutchinson, Timothy A., Hwang, Ho Seong, Angel, Camilo Eduardo Jimenez, Johnson, Jennifer A., Jones, Amy, Jonsson, Henrik, Jullo, Eric, Khan, Fahim Sakil, Kinemuchi, Karen, Kirkby, David, Kirkpatrick IV, Charles C., Kitaura, Francisco-Shu, Knapp, Gillian R., Kneib, Jean-Paul, Kollmeier, Juna A., Lacerna, Ivan, Lane, Richard R., Lang, Dustin, Law, David R., Goff, Jean-Marc Le, Lee, Young-Bae, Li, Hongyu, Li, Cheng, Lian, Jianhui, Liang, Yu, Lima, Marcos, Lin, Lihwai, Long, Dan, Lucatello, Sara, Lundgren, Britt, Mackereth, J. Ted, MacLeod, Chelsea L., Mahadevan, Suvrath, Maia, Marcio Antonio Geimba, Majewski, Steven, Manchado, Arturo, Maraston, Claudia, Mariappan, Vivek, Marques-Chaves, Rui, Masseron, Thomas, Masters, Karen L., McDermid, Richard M., McGreer, Ian D., Melendez, Matthew, Meneses-Goytia, Sofia, Merloni, Andrea, Merrifield, Michael R., Meszaros, Szabolcs, Meza, Andres, Minchev, Ivan, Minniti, Dante, Mueller, Eva-Maria, Muller-Sanchez, Francisco, Muna, Demitri, Munoz, Ricardo R., Myers, Adam D., Nair, Preethi, Nandra, Kirpal, Ness, Melissa, Newman, Jeffrey A., Nichol, Robert C., Nidever, David L., Nitschelm, Christian, Noterdaeme, Pasquier, O'Connell, Julia, Oelkers, Ryan James, Oravetz, Audrey, Oravetz, Daniel, Ortiz, Erik Aquino, Osorio, Yeisson, Pace, Zach, Padilla, Nelson, Palanque-Delabrouille, Nathalie, Palicio, Pedro Alonso, Pan, Hsi-An, Pan, Kaike, Parikh, Taniya, Paris, Isabelle, Park, Changbom, Peirani, Sebastien, Pellejero-Ibanez, Marcos, Penny, Samantha, Percival, Will J., Perez-Fournon, Ismael, Petitjean, Patrick, Pieri, Matthew M., Pinsonneault, Marc, Pisani, Alice, Prada, Francisco, Prakash, Abhishek, Queiroz, Anna Barbara de Andrade, Raddick, M. Jordan, Raichoor, Anand, Rembold, Sandro Barboza, Richstein, Hannah, Riffel, Rogemar A., Riffel, Rogerio, Rix, Hans-Walter, Robin, Annie C., Torres, Sergio Rodriguez, Roman-Zuniga, Carlos, Ross, Ashley J., Rossi, Graziano, Ruan, John, Ruggeri, Rossana, Ruiz, Jose, Salvato, Mara, Sanchez, Ariel G., Sanchez, Sebastian F., Almeida, Jorge Sanchez, Sanchez-Gallego, Jose R., Rojas, Felipe Antonio Santana, Santiago, Basilio Xavier, Schiavon, Ricardo P., Schimoia, Jaderson S., Schlafly, Edward, Schlegel, David, Schneider, Donald P., Schuster, William J., Schwope, Axel, Seo, Hee-Jong, Serenelli, Aldo, Shen, Shiyin, Shen, Yue, Shetrone, Matthew, Shull, Michael, Aguirre, Victor Silva, Simon, Joshua D., Skrutskie, Mike, Slosar, Anze, Smethurst, Rebecca, Smith, Verne, Sobeck, Jennifer, Somers, Garrett, Souter, Barbara J., Souto, Diogo, Spindler, Ashley, Stark, David V., Stassun, Keivan, Steinmetz, Matthias, Stello, Dennis, Storchi-Bergmann, Thaisa, Streblyanska, Alina, Stringfellow, Guy, Suarez, Genaro, Sun, Jing, Szigeti, Laszlo, Taghizadeh-Popp, Manuchehr, Talbot, Michael S., Tang, Baitian, Tao, Charling, Tayar, Jamie, Tembe, Mita, Teske, Johanna, Thaker, Aniruddha R., Thomas, Daniel, Tissera, Patricia, Tojeiro, Rita, Tremonti, Christy, Troup, Nicholas W., Urry, Meg, Valenzuela, O., Bosch, Remco van den, Vargas-Gonzalez, Jaime, Vargas-Magana, Mariana, Vazquez, Jose Alberto, Villanova, Sandro, Vogt, Nicole, Wake, David, Wang, Yuting, Weaver, Benjamin Alan, Weijmans, Anne-Marie, Weinberg, David H., Westfall, Kyle B., Whelan, David G., Wilcots, Eric, Wild, Vivienne, Williams, Rob A., Wilson, John, Wood-Vasey, W. M., Wylezalek, Dominika, Xiao, Ting, Yan, Renbin, Yang, Meng, Ybarra, Jason E., Yeche, Christophe, Zakamska, Nadia, Zamora, Olga, Zarrouk, Pauline, Zasowski, Gail, Zhang, Kai, Zhao, Cheng, Zhao, Gong-Bo, Zheng, Zheng, Zhou, Zhi-Min, Zhu, Guangtun, Zinn, Joel C., and Zou, Hu
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Astrophysics - Astrophysics of Galaxies ,Astrophysics - Instrumentation and Methods for Astrophysics - Abstract
The fourth generation of the Sloan Digital Sky Survey (SDSS-IV) has been in operation since July 2014. This paper describes the second data release from this phase, and the fourteenth from SDSS overall (making this, Data Release Fourteen or DR14). This release makes public data taken by SDSS-IV in its first two years of operation (July 2014-2016). Like all previous SDSS releases, DR14 is cumulative, including the most recent reductions and calibrations of all data taken by SDSS since the first phase began operations in 2000. New in DR14 is the first public release of data from the extended Baryon Oscillation Spectroscopic Survey (eBOSS); the first data from the second phase of the Apache Point Observatory (APO) Galactic Evolution Experiment (APOGEE-2), including stellar parameter estimates from an innovative data driven machine learning algorithm known as "The Cannon"; and almost twice as many data cubes from the Mapping Nearby Galaxies at APO (MaNGA) survey as were in the previous release (N = 2812 in total). This paper describes the location and format of the publicly available data from SDSS-IV surveys. We provide references to the important technical papers describing how these data have been taken (both targeting and observation details) and processed for scientific use. The SDSS website (www.sdss.org) has been updated for this release, and provides links to data downloads, as well as tutorials and examples of data use. SDSS-IV is planning to continue to collect astronomical data until 2020, and will be followed by SDSS-V., Comment: SDSS-IV collaboration alphabetical author data release paper. DR14 happened on 31st July 2017. 19 pages, 5 figures. Accepted by ApJS on 28th Nov 2017 (this is the "post-print" and "post-proofs" version; minor corrections only from v1, and most of errors found in proofs corrected)
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- 2017
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199. The high A_V Quasar Survey: A z=2.027 metal-rich damped Lyman-alpha absorber towards a red quasar at z=3.21
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Fynbo, Johan P. U., Krogager, Jens-Kristian, Heintz, Kasper E., Geier, Stefan, Møller, Palle, Noterdaeme, Pasquier, Christensen, Lise, Ledoux, Cedric, and Jakobsson, Pall
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Astrophysics - Astrophysics of Galaxies - Abstract
To fully exploit the potential of quasars as probes of cosmic chemical evolution and the internal gas dynamics of galaxies it is important to understand the selection effects behind the quasar samples and in particular if the selection criteria exclude foreground galaxies with certain properties (most importantly a high dust content). Here we present spectroscopic follow-up from the 10.4-m GTC telescope of a dust-reddened quasar, eHAQ0111+0641, from the extended High A_V Quasar (HAQ) survey. We find that the z=3.21 quasar has a foreground Damped Lyman-alpha Absorber (DLA) at z=2.027 along the line of sight. The DLA has very strong metal lines due to a moderately high metallicity (with an inferred lower limit of 25% of the solar metallicity), but a very large gas column density along the line-of-sight in its host galaxy. This discovery is further evidence that there is a dust bias affecting the census of metals, caused by the combined effect of dust obscuration and reddening, in existing samples of z>2 DLAs. The case of eHAQ0111+0641 illustrates that dust bias is not only caused by dust obscuration, but also dust reddening., Comment: 7 pages, 4 figures. Accepted for publication in A&A. A few typos have been corrected
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- 2017
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200. [O II] nebular emission from Mg II absorbers: Star formation associated with the absorbing gas
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Joshi, Ravi, Srianand, Raghunathan, Petitjean, Patrick, and Noterdaeme, Pasquier
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Astrophysics - Astrophysics of Galaxies - Abstract
We present nebular emission associated with 198 strong Mg II absorbers at 0.35 $\le z \le$ 1.1 in the fibre spectra of quasars from the Sloan Digital Sky Survey. Measured [O II] luminosities (L$_{[O II]}$) are typical of sub-L$^{\star}$ galaxies with derived star formation rate (uncorrected for fibre losses and dust reddening) in the range of 0.5-20 ${\rm M_\odot\ yr^{-1}}$. Typically less than $\sim$ 3% of the Mg II systems with rest equivalent width, $W_{2796}$ $\ge$ 2 \AA, show L$_{[O II]} \ge 0.3$ L$^{\star}_{[O II]}$. The detection rate is found to increase with increasing $W_{2796}$ and $z$. No significant correlation is found between $W_{2796}$ and L$_{[O II]}$ even when we restrict the samples to narrow $z$-ranges. A strong correlation is seen between L$_{[O II]}$ and $z$. While this is expected from the luminosity evolution of galaxies, we show finite fibre size plays a very crucial role in this correlation. The measured nebular line ratios (like [O III]/[O II] and [O III]/H$\beta$) and their $z$ evolution are consistent with those of galaxies detected in deep surveys. Based on the median stacked spectra, we infer the average metallicity (log Z $\sim$8.3), ionization parameter (log $q$ $\sim$7.5) and stellar mass (log (M/M$_\odot$)$\sim$9.3). The Mg II systems with nebular emission typically have $W_{2796}$ $\ge 2$ \AA, Mg II doublet ratio close to 1 and W(Fe II$\lambda$2600)/$W_{2796}$ $\sim 0.5$ as often seen in damped Ly$\alpha$ and 21-cm absorbers at these redshifts. This is the biggest reported sample of [O II] emission from Mg II absorbers at low impact parameters ideally suited for probing various feedback processes at play in $z\le 1$ galaxies., Comment: 18 Pages, 18 Figures, 4 Tables (Accepted for the Publication in MNRAS main-journal)
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- 2017
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