1,597 results on '"Boström P"'
Search Results
202. Clarity and adaptability of instructions preventing the spread of the COVID-19 virus and its association with individual and organisational factors regarding the psychosocial work environment: a cross-sectional study
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Hammar, Lena Marmstål, Alam, Moudud, Eklund, Caroline, Boström, Anne-Marie, and Lövenmark, Annica
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- 2023
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203. Levels of inflammatory cytokines MCP-1, CCL4, and PD-L1 in CSF differentiate idiopathic normal pressure hydrocephalus from neurodegenerative diseases
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Braun, Madelene, Boström, Gustaf, Ingelsson, Martin, Kilander, Lena, Löwenmark, Malin, Nyholm, Dag, Burman, Joachim, Niemelä, Valter, Freyhult, Eva, Kultima, Kim, and Virhammar, Johan
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- 2023
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204. Summarizing the effects of different exercise types in chronic neck pain – a systematic review and meta-analysis of systematic reviews
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Rasmussen-Barr, Eva, Halvorsen, Marie, Bohman, Tony, Boström, Carina, Dedering, Åsa, Kuster, Roman P., Olsson, Christina B., Rovner, Graciela, Tseli, Elena, Nilsson-Wikmar, Lena, and Grooten, Wilhelmus Johannes Andreas
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- 2023
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205. Detoxified synthetic bacterial membrane vesicles as a vaccine platform against bacteria and SARS-CoV-2
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Park, Kyong-Su, Svennerholm, Kristina, Crescitelli, Rossella, Lässer, Cecilia, Gribonika, Inta, Andersson, Mickael, Boström, Jonas, Alalam, Hanna, Harandi, Ali M, Farewell, Anne, and Lötvall, Jan
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- 2023
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206. Long-term health-related quality of life after trauma with and without traumatic brain injury: a prospective cohort study
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Kiwanuka, Olivia, Lassarén, Philipp, Thelin, Eric P., Hånell, Anders, Sandblom, Gabriel, Fagerdahl, Ami, and Boström, Lennart
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- 2023
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207. Regional clozapine, ECT and lithium usage inversely associated with excess suicide rates in male adolescents
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Desai Boström, Adrian E., Andersson, Peter, Rask-Andersen, Mathias, Jarbin, Håkan, Lundberg, Johan, and Jokinen, Jussi
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- 2023
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208. Base-resolution UV footprinting by sequencing reveals distinctive damage signatures for DNA-binding proteins
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Elliott, Kerryn, Singh, Vinod Kumar, Boström, Martin, and Larsson, Erik
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- 2023
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209. Hyperbaric oxygen therapy for long COVID (HOT-LoCO), an interim safety report from a randomised controlled trial
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Kjellberg, Anders, Hassler, Adrian, Boström, Emil, El Gharbi, Sara, Al-Ezerjawi, Sarah, Kowalski, Jan, Rodriguez-Wallberg, Kenny A., Bruchfeld, Judith, Ståhlberg, Marcus, Nygren-Bonnier, Malin, Runold, Michael, and Lindholm, Peter
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- 2023
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210. Methylation in MAD1L1 is associated with the severity of suicide attempt and phenotypes of depression
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Sokolov, Aleksandr V., Manu, Diana-Maria, Nordberg, Didi O. T., Boström, Adrian D. E., Jokinen, Jussi, and Schiöth, Helgi B.
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- 2023
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211. Accelerated epigenetic aging in women with emotionally unstable personality disorder and a history of suicide attempts
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Boström, Adrian Desai E., Andersson, Peter, Jamshidi, Esmail, Wilczek, Alexander, Nilsonne, Åsa, Rask-Andersen, Mathias, Åsberg, Marie, and Jokinen, Jussi
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- 2023
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212. Novel Structures of Type 1 Glyceraldehyde-3-phosphate Dehydrogenase from Escherichia coli Provide New Insights into the Mechanism of Generation of 1,3-Bisphosphoglyceric Acid.
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Liu, Meiruo, Bao, Luyao, Boström, Kristina, Yao, Yucheng, Li, Jixi, Gu, Shaohua, Ji, Chaoneng, and Zhang, Li
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1 ,3-diphosphoglycerate ,BPG ,Escherichia coli type 1 GAPDH ,catalytic process ,thioacyl intermediate structure ,Escherichia coli ,Glyceraldehyde-3-Phosphate Dehydrogenases ,NAD - Abstract
Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) is a highly conserved enzyme involved in the ubiquitous process of glycolysis and presents a loop (residues 208-215 of Escherichia coli GAPDH) in two alternative conformations (I and II). It is uncertain what triggers this loop rearrangement, as well as which is the precise site from which phosphate attacks the thioacyl intermediate precursor of 1,3-bisphosphoglycerate (BPG). To clarify these uncertainties, we determined the crystal structures of complexes of wild-type GAPDH (WT) with NAD and phosphate or G3P, and of essentially inactive GAPDH mutants (C150S, H177A), trapping crystal structures for the thioacyl intermediate or for ternary complexes with NAD and either phosphate, BPG, or G3P. Analysis of these structures reported here lead us to propose that phosphate is located in the new Pi site attacks the thioester bond of the thioacyl intermediate to generate 1,3-bisphosphoglyceric acid (BPG). In the structure of the thioacyl intermediate, the mobile loop is in conformation II in subunits O, P, and R, while both conformations coexist in subunit Q. Moreover, only the Q subunit hosts bound NADH. In the R subunit, only the pyrophosphate part of NADH is well defined, and NADH is totally absent from the O and P subunits. Thus, the change in loop conformation appears to occur after NADH is produced, before NADH is released. In addition, two new D-glyceraldehyde-3-phosphate (G3P) binding forms are observed in WT.NAD.G3P and C150A+H177A.NAD.G3P. In summary, this paper improves our understanding of the GAPDH catalytic mechanism, particularly regarding BPG formation.
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- 2021
213. Shifting osteogenesis in vascular calcification
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Yao, Jiayi, Wu, Xiuju, Qiao, Xiaojing, Zhang, Daoqin, Zhang, Li, A., Jocelyn, Cai, Xinjiang, Boström, Kristina I, and Yao, Yucheng
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Stem Cell Research - Nonembryonic - Non-Human ,Heart Disease ,Heart Disease - Coronary Heart Disease ,Stem Cell Research ,Cardiovascular ,Good Health and Well Being ,Animals ,Cell Differentiation ,Cell Line ,Endothelial Cells ,Endothelium ,Vascular ,Glycogen Synthase Kinase 3 ,Indoles ,Maleimides ,Mice ,Mice ,Transgenic ,Osteogenesis ,Protein Kinase Inhibitors ,Vascular Calcification ,Cardiovascular disease ,Vascular Biology - Abstract
Transitions between cell fates commonly occur in development and disease. However, reversing an unwanted cell transition in order to treat disease remains an unexplored area. Here, we report a successful process of guiding ill-fated transitions toward normalization in vascular calcification. Vascular calcification is a severe complication that increases the all-cause mortality of cardiovascular disease but lacks medical therapy. The vascular endothelium is a contributor of osteoprogenitor cells to vascular calcification through endothelial-mesenchymal transitions, in which endothelial cells (ECs) gain plasticity and the ability to differentiate into osteoblast-like cells. We created a high-throughput screening and identified SB216763, an inhibitor of glycogen synthase kinase 3 (GSK3), as an inducer of osteoblastic-endothelial transition. We demonstrated that SB216763 limited osteogenic differentiation in ECs at an early stage of vascular calcification. Lineage tracing showed that SB216763 redirected osteoblast-like cells to the endothelial lineage and reduced late-stage calcification. We also found that deletion of GSK3β in osteoblasts recapitulated osteoblastic-endothelial transition and reduced vascular calcification. Overall, inhibition of GSK3β promoted the transition of cells with osteoblastic characteristics to endothelial differentiation, thereby ameliorating vascular calcification.
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- 2021
214. Computer extracted gland features from H&E predicts prostate cancer recurrence comparably to a genomic companion diagnostic test: a large multi-site study.
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Leo, Patrick, Janowczyk, Andrew, Elliott, Robin, Janaki, Nafiseh, Bera, Kaustav, Shiradkar, Rakesh, Farré, Xavier, Fu, Pingfu, El-Fahmawi, Ayah, Shahait, Mohammed, Kim, Jessica, Lee, David, Yamoah, Kosj, Rebbeck, Timothy R, Khani, Francesca, Robinson, Brian D, Eklund, Lauri, Jambor, Ivan, Merisaari, Harri, Ettala, Otto, Taimen, Pekka, Aronen, Hannu J, Boström, Peter J, Tewari, Ashutosh, Magi-Galluzzi, Cristina, Klein, Eric, Purysko, Andrei, Nc Shih, Natalie, Feldman, Michael, Gupta, Sanjay, Lal, Priti, and Madabhushi, Anant
- Abstract
Existing tools for post-radical prostatectomy (RP) prostate cancer biochemical recurrence (BCR) prognosis rely on human pathologist-derived parameters such as tumor grade, with the resulting inter-reviewer variability. Genomic companion diagnostic tests such as Decipher tend to be tissue destructive, expensive, and not routinely available in most centers. We present a tissue non-destructive method for automated BCR prognosis, termed "Histotyping", that employs computational image analysis of morphologic patterns of prostate tissue from a single, routinely acquired hematoxylin and eosin slide. Patients from two institutions (n = 214) were used to train Histotyping for identifying high-risk patients based on six features of glandular morphology extracted from RP specimens. Histotyping was validated for post-RP BCR prognosis on a separate set of n = 675 patients from five institutions and compared against Decipher on n = 167 patients. Histotyping was prognostic of BCR in the validation set (p
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- 2021
215. Contributions of the Endothelium to Vascular Calcification.
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Yao, Jiayi, Yao, Yucheng, Boström, Kristina, and Zhang, Li
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bone morphogenetic protein ,endothelial cells ,endothelial-mesenchymal transition ,vascular calcification ,vascular endothelium - Abstract
Vascular calcification (VC) increases morbidity and mortality and constitutes a significant obstacle during percutaneous interventions and surgeries. On a cellular and molecular level, VC is a highly regulated process that involves abnormal cell transitions and osteogenic differentiation, re-purposing of signaling pathways normally used in bone, and even formation of osteoclast-like cells. Endothelial cells have been shown to contribute to VC through a variety of means. This includes direct contributions of osteoprogenitor cells generated through endothelial-mesenchymal transitions in activated endothelium, with subsequent migration into the vessel wall. The endothelium also secretes pro-osteogenic growth factors, such as bone morphogenetic proteins, inflammatory mediators and cytokines in conditions like hyperlipidemia, diabetes, and renal failure. High phosphate levels caused by renal disease have deleterious effects on the endothelium, and induction of tissue non-specific alkaline phosphatase adds to the calcific process. Furthermore, endothelial activation promotes proteolytic destruction of the internal elastic lamina that serves, among other things, as a stabilizer of the endothelium. Appropriate bone mineralization is highly dependent on active angiogenesis, but it is unclear whether the same relationship exists in VC. Through its location facing the vascular lumen, the endothelium is the first to encounter circulating factor and bone marrow-derived cells that might contribute to osteoclast-like versus osteoblast-like cells in the vascular wall. In the same way, the endothelium may be the easiest target to reach with treatments aimed at limiting calcification. This review provides a brief summary of the contributions of the endothelium to VC as we currently know them.
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- 2021
216. Real-world EGFR testing practices for non-small-cell lung cancer by thoracic pathology laboratories across Europe
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Hofman, P., Calabrese, F., Kern, I., Adam, J., Alarcão, A., Alborelli, I., Anton, N.T., Arndt, A., Avdalyan, A., Barberis, M., Bégueret, H., Bisig, B., Blons, H., Boström, P., Brcic, L., Bubanovic, G., Buisson, A., Caliò, A., Cannone, M., Carvalho, L., Caumont, C., Cayre, A., Chalabreysse, L., Chenard, M.P., Conde, E., Copin, M.C., Côté, J.F., D’Haene, N., Dai, H.Y., de Leval, L., Delongova, P., Denčić-Fekete, M., Fabre, A., Ferenc, F., Forest, F., de Fraipont, F., Garcia-Martos, M., Gauchotte, G., Geraghty, R., Guerin, E., Guerrero, D., Hernandez, S., Hurník, P., Jean-Jacques, B., Kashofer, K., Kazdal, D., Lantuejoul, S., Leonce, C., Lupo, A., Malapelle, U., Matej, R., Merlin, J.L., Mertz, K.D., Morel, A., Mutka, A., Normanno, N., Ovidiu, P., Panizo, A., Papotti, M.G., Parobkova, E., Pasello, G., Pauwels, P., Pelosi, G., Penault-Llorca, F., Picot, T., Piton, N., Pittaro, A., Planchard, G., Poté, N., Radonic, T., Rapa, I., Rappa, A., Roma, C., Rot, M., Sabourin, J.C., Salmon, I., Prince, S. Savic, Scarpa, A., Schuuring, E., Serre, I., Siozopoulou, V., Sizaret, D., Smojver-Ježek, S., Solassol, J., Steinestel, K., Stojšić, J., Syrykh, C., Timofeev, S., Troncone, G., Uguen, A., Valmary-Degano, S., Vigier, A., Volante, M., Wahl, S.G.F., Stenzinger, A., and Ilié, M.
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- 2023
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217. Full-spectrum high resolution modeling of the dielectric function of water
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Fiedler, Johannes, Boström, Mathias, Persson, Clas, Brevik, Iver, Corkery, Robert, Buhmann, Stefan Y., and Parsons, Drew F.
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Physics - Optics ,Physics - Chemical Physics - Abstract
In view of the vital role of water in chemical and physical processes, an exact knowledge of its dielectric function over a large frequency range is important. In this article we report on currently available measurements of the dielectric function of water at room temperature (25$^{\circ}$C) across the full electromagnetic spectrum: microwave, IR, UV and X-ray (up to 100 eV). We provide parameterisations of the complex dielectric function of water with two Debye (microwave) oscillators and high resolution of IR and UV/X-ray oscillators. We also report dielectric parameters for ice-cold water with a microwave/IR spectrum measured at $0.4^\circ$C, while taking the UV spectrum from 25$^{\circ}$C (assuming negligible temperature dependence in UV). We illustrate the consequences of the model via calculations of van der Waals interactions of gas molecules near water surfaces, and an assessment of the thickness of water films on ice and ice films on water. In contrast to earlier models of ice-cold water, we predict that a micron-scale layer of ice is stabilised on a bulk water surface. Similarly, the van der Waals interaction promotes complete freezing rather than supporting a thin premelting layer of water on a bulk ice surface. Density-based extrapolation from warm to cold water of the dielectric function at imaginary frequencies is found to be satisfactory in the microwave but poor (40% error) at IR frequencies.
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- 2019
218. A study of data and label shift in the LIME framework
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Rahnama, Amir Hossein Akhavan and Boström, Henrik
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Statistics - Machine Learning ,Computer Science - Machine Learning - Abstract
LIME is a popular approach for explaining a black-box prediction through an interpretable model that is trained on instances in the vicinity of the predicted instance. To generate these instances, LIME randomly selects a subset of the non-zero features of the predicted instance. After that, the perturbed instances are fed into the black-box model to obtain labels for these, which are then used for training the interpretable model. In this study, we present a systematic evaluation of the interpretable models that are output by LIME on the two use-cases that were considered in the original paper introducing the approach; text classification and object detection. The investigation shows that the perturbation and labeling phases result in both data and label shift. In addition, we study the correlation between the shift and the fidelity of the interpretable model and show that in certain cases the shift negatively correlates with the fidelity. Based on these findings, it is argued that there is a need for a new sampling approach that mitigates the shift in the LIME's framework., Comment: Accepted at the Neurip 2019 Workshop "Human-Centric Machine Learning" (poster + spotlight talk)
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- 2019
219. Discovery and Rapid Follow-up Observations of the Unusual Type II SN 2018ivc in NGC 1068
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Bostroem, K. A., Valenti, S., Sand, D. J., Andrews, J. E., Van Dyk, S. D., Galbany, L., Pooley, D., Amaro, R. C., Smith, N., Yang, S., Anupama, G. C., Arcavi, I., Baron, E., Brown, P. J., Burke, J., Cartier, R., Hiramatsu, D., Dong, Y., Egami, E., Ertel, S., Filippenko, A. V., Fox, O. D., Haislip, J., Hosseinzadeh, G., Howell, D. A., Gangopadhyay, A., Jha, S. W., Kouprianov, V., Kumar, B., Lundquist, M., Milisavljevic, D., McCully, C., Milne, P., Misra, K., Reichart, D. E., Sahu, D. K., Sai, H., Singh, A., Smith, P. S., Vinko, J., Wang, X., Wang, Y., Wheeler, J. C., Williams, G. G., Wyatt, S., Zhang, J., and Zhang, X.
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Astrophysics - High Energy Astrophysical Phenomena ,Astrophysics - Solar and Stellar Astrophysics - Abstract
We present the discovery and high-cadence follow-up observations of SN 2018ivc, an unusual Type II supernova that exploded in NGC 1068 (D=10.1 Mpc). The light curve of SN 2018ivc declines piecewise-linearly, changing slope frequently, with four clear slope changes in the first 30 days of evolution. This rapidly changing light curve indicates that interaction between the circumstellar material and ejecta plays a significant role in the evolution. Circumstellar interaction is further supported by a strong X-ray detection. The spectra are rapidly evolving and dominated by hydrogen, helium, and calcium emission lines. We identify a rare high-velocity emission-line feature blueshifted at ~7800 km/s (in Ha, Hb, Pb, Pg, HeI, CaII), which is visible from day 18 until at least day 78 and could be evidence of an asymmetric progenitor or explosion. From the overall similarity between SN 2018ivc and SN 1996al, the \Ha{} equivalent width of its parent HII region, and constraints from pre-explosion archival Hubble Space Telescope images, we find that the progenitor of SN 2018ivc could be as massive as 52 Msun but is more likely <12 Msun. SN 2018ivc demonstrates the importance of the early discovery and rapid follow-up observations of nearby supernovae to study the physics and progenitors of these cosmic explosions., Comment: Accepted by ApJ. Revised version includes more extensive progenitor analysis
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- 2019
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220. Hidden Diversity of Vacancy Networks in Prussian Blue Analogues
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Simonov, Arkadiy, De Baerdemaeker, Trees, Boström, Hanna L. B., Gómez, María Laura Ríos, Gray, Harry J., Chernyshov, Dmitry, Bosak, Alexey, Bürgi, Hans-Beat, and Goodwin, Andrew L.
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Condensed Matter - Materials Science - Abstract
Prussian blue analogues (PBAs) are a broad and important family of microporous inorganic solids, famous for their gas storage, metal-ion immobilisation, proton conduction, and stimuli-dependent magnetic, electronic and optical properties. The family also includes the widely-used double-metal cyanide (DMC) catalysts and the topical hexacyanoferrate/hexacyanomanganate (HCF/HCM) battery materials. Central to the various physical properties of PBAs is the ability to transport mass reversibly, a process made possible by structural vacancies. Normally presumed random, vacancy arrangements are actually crucially important because they control the connectivity of the micropore network, and hence diffusivity and adsorption profiles. The long-standing obstacle to characterising PBA vacancy networks has always been the relative inaccessibility of single-crystal samples. Here we report the growth of single crystals of a range of PBAs. By measuring and interpreting their X-ray diffuse scattering patterns, we identify for the first time a striking diversity of non-random vacancy arrangements that is hidden from conventional crystallographic analysis of powder samples. Moreover, we show that this unexpected phase complexity can be understood in terms of a remarkably simple microscopic model based on local rules of electroneutrality and centrosymmetry. The hidden phase boundaries that emerge demarcate vacancy-network polymorphs with profoundly different micropore characteristics. Our results establish a clear foundation for correlated defect engineering in PBAs as a means of controlling storage capacity, anisotropy, and transport efficiency.
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- 2019
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221. Role of zero point energy in promoting ice formation in a spherical drop of water
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Parashar, Prachi, Shajesh, K. V., Milton, Kimball A., Parsons, Drew F., Brevik, Iver, and Boström, Mathias
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Condensed Matter - Mesoscale and Nanoscale Physics - Abstract
We demonstrate that the Lifshitz interaction energy (excluding the self-energies of the inner and outer spherical regions) for three concentric spherical dielectric media can be evaluated easily using the immense computation power in recent processors relative to those of a few decades ago. As a prototype, we compute the Lifshitz interaction energy for a spherical shell of water immersed in water vapor of infinite extent while enclosing a spherical ball of ice inside the shell, such that two concentric spherical interfaces are formed: one between solid ice and liquid water and the other between liquid water and gaseous vapor. We evaluate the Lifshitz interaction energy for the above configuration at the triple point of water when the solid, liquid, and gaseous states of water coexist, and, thus, extend the analysis of Elbaum and Schick in Phys. Rev. Lett. 66 (1991) 1713 to spherical configurations. We find that, when the Lifshitz energy contributes dominantly to the total energy of this system, which is often the case when electrostatic interactions are absent, a drop of water surrounded by vapor of infinite extent is not stable at the triple point. This instability, that is a manifestation of the quantum fluctuations in the medium, will promote formation of ice in water, which will then grow in size indefinitely. This is a consequence of the finding here that the Lifshitz energy is minimized for large (micrometer size) radius of the ice ball and small (nanometer size) thickness of the water shell surrounding the ice. These results might be relevant to the formation of hail in thunderclouds. These results are tentative in that the self-energies are omitted; surface tension and nucleation energy are not considered., Comment: 15 pages, 9 figures, 1 table, conclusions toned down
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- 2019
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222. SN 2017gmr: An energetic Type II-P supernova with asymmetries
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Andrews, Jennifer E., Sand, D. J., Valenti, S., Smith, Nathan, Dastidar, Raya, Sahu, D. K., Misra, Kuntal, Singh, Avinash, Hiramatsu, D., Brown, P. J., Hosseinzadeh, G., Wyatt, S., Vinko, J., Anupama, G. C., Arcavi, I., Ashall, Chris, Benetti, S., Berton, Marco, Bostroem, K. A., Bulla, M., Burke, J., Chen, S., Chomiuk, L., Cikota, A., Congiu, E., Cseh, B., Davis, Scott, Elias-Rosa, N., Faran, T., Fraser, Morgan, Galbany, L., Gall, C., Gal-Yam, A., Gangopadhyay, Anjasha, Gromadzki, M., Haislip, J., Howell, D. A., Hsiao, E. Y., Inserra, C., Kankare, E., Kuncarayakti, H., Kouprianov, V., Kumar, Brajesh, Li, Xue, Lin, Han, Maguire, K., Mazzali, P., McCully, C., Milne, P., Mo, Jun, Morrell, N., Nicholl, M., Ochner, P., Olivares, F., Pastorello, A., Patat, F., Phillips, M., Pignata, G., Prentice, S., Reguitti, A., Reichart, D. E., Rodríguez, Ó., Rui, Liming, Sanwal, Pankaj, Sárneczky, K., Shahbandeh, M., Singh, Mridweeka, Smartt, S., Strader, J., Stritzinger, M. D., Szakáts, R., Tartaglia, L., Wang, Huijuan, Wang, Lingzhi, Wang, Xiaofeng, Wheeler, J. C., Xang, Danfeng, Yaron, O., Young, D. R., and Zhang, Junbo
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Astrophysics - High Energy Astrophysical Phenomena ,Astrophysics - Solar and Stellar Astrophysics - Abstract
We present high-cadence ultraviolet (UV), optical, and near-infrared (NIR) data on the luminous Type II-P supernova SN 2017gmr from hours after discovery through the first 180 days. SN 2017gmr does not show signs of narrow, high-ionization emission lines in the early optical spectra, yet the optical lightcurve evolution suggests that an extra energy source from circumstellar medium (CSM) interaction must be present for at least 2 days after explosion. Modeling of the early lightcurve indicates a ~500R$_{\odot}$ progenitor radius, consistent with a rather compact red supergiant, and late-time luminosities indicate up to 0.130 $\pm$ 0.026 M$_{\odot}$ of $^{56}$Ni are present, if the lightcurve is solely powered by radioactive decay, although the $^{56}$Ni mass may be lower if CSM interaction contributes to the post-plateau luminosity. Prominent multi-peaked emission lines of H$\alpha$ and [O I] emerge after day 154, as a result of either an asymmetric explosion or asymmetries in the CSM. The lack of narrow lines within the first two days of explosion in the likely presence of CSM interaction may be an example of close, dense, asymmetric CSM that is quickly enveloped by the spherical supernova ejecta., Comment: Submitted to ApJ, 25 pages, plus Appendix
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- 2019
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223. Dispersion forces in inhomogeneous planarly layered media: A one-dimensional model for effective polarisabilities
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Fiedler, Johannes, Spallek, Fabian, Thiyam, Priyadarshini, Persson, Clas, Boström, Mathias, Walter, Michael, and Buhmann, Stefan Yoshi
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Quantum Physics ,Physics - Optics - Abstract
Dispersion forces such as van der Waals forces between two microscopic particles, the Casimir--Polder forces between a particle and a macroscopic object or the Casimir force between two dielectric objects are well studied in vacuum. However, in realistic situations the interacting objects are often embedded in an environmental medium. Such a solvent influences the induced dipole interaction. With the framework of macroscopic quantum electrodynamics, these interactions are mediated via an exchange of virtual photons. Via this method the impact of a homogeneous solvent medium can be expressed as local-field corrections leading to excess polarisabilities which have previously been derived for hard boundary conditions. In order to develop a more realistic description, we investigate on a one-dimensional analog system illustrating the influence of a continuous dielectric profile.
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- 2019
224. Block-distributed Gradient Boosted Trees
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Vasiloudis, Theodore, Cho, Hyunsu, and Boström, Henrik
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Computer Science - Machine Learning ,Computer Science - Information Retrieval ,Statistics - Machine Learning - Abstract
The Gradient Boosted Tree (GBT) algorithm is one of the most popular machine learning algorithms used in production, for tasks that include Click-Through Rate (CTR) prediction and learning-to-rank. To deal with the massive datasets available today, many distributed GBT methods have been proposed. However, they all assume a row-distributed dataset, addressing scalability only with respect to the number of data points and not the number of features, and increasing communication cost for high-dimensional data. In order to allow for scalability across both the data point and feature dimensions, and reduce communication cost, we propose block-distributed GBTs. We achieve communication efficiency by making full use of the data sparsity and adapting the Quickscorer algorithm to the block-distributed setting. We evaluate our approach using datasets with millions of features, and demonstrate that we are able to achieve multiple orders of magnitude reduction in communication cost for sparse data, with no loss in accuracy, while providing a more scalable design. As a result, we are able to reduce the training time for high-dimensional data, and allow more cost-effective scale-out without the need for expensive network communication., Comment: SIGIR 2019
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- 2019
225. Dispersion forces stabilise ice coatings at certain gas hydrate interfaces which prevent water wetting
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Boström, Mathias, Corkery, Robert, Lima, Eduardo, Malyi, Oleksandr, Buhmann, Stefan Y., Persson, Clas, Brevik, Iver, Parsons, Drew F., and Fiedler, Johannes
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Astrophysics - Earth and Planetary Astrophysics ,Physics - Chemical Physics - Abstract
Gas hydrates formed in oceans and permafrost occur in vast quantities on Earth representing both a massive potential fuel source and a large threat in climate forecasts. They have been predicted to be important on other bodies in our solar systems such as Enceladus, a moon of Saturn. CO$_2$-hydrates likely drive the massive gas-rich water plumes seen and sampled by the spacecraft Cassini, and the source of these hydrates is thought to be due to buoyant gas hydrate particles. Dispersion forces cause gas hydrates to be coated in a 3-4 nm thick film of ice, or to contact water directly, depending on which gas they contain. These films are shown to significantly alter the properties of the gas hydrate clusters, for example, whether they float or sink. It is also expected to influence gas hydrate growth and gas leakage.
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- 2019
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226. The Type II-P Supernova 2017eaw: from explosion to the nebular phase
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Szalai, Tamás, Vinkó, József, Könyves-Tóth, Réka, Nagy, Andrea P., Bostroem, K. Azalee, Sárneczky, Krisztián, Brown, Peter J., Pejcha, Ondrej, Bódi, Attila, Cseh, Borbála, Csörnyei, Géza, Dencs, Zoltán, Hanyecz, Ottó, Ignácz, Bernadett, Kalup, Csilla, Kriskovics, Levente, Ordasi, András, Pál, András, Seli, Bálint, Sódor, Ádám, Szakáts, Róbert, Vida, Krisztián, Zsidi, Gabriella, Arcavi, Iair, Ashall, Chris, Burke, Jamison, Galbany, Lluís, Hiramatsu, Daichi, Hosseinzadeh, Griffin, Hsiao, Eric Y., Howell, D. Andrew, McCully, Curtis, Moran, Shane, Rho, Jeonghee, Sand, David J., Shahbandeh, Melissa, Valenti, Stefano, Wang, Xiaofeng, and Wheeler, J. Craig
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Astrophysics - High Energy Astrophysical Phenomena - Abstract
The nearby SN 2017eaw is a Type II-P (``plateau') supernova showing early-time, moderate CSM interaction. We present a comprehensive study of this SN including the analysis of high-quality optical photometry and spectroscopy covering the very early epochs up to the nebular phase, as well as near-UV and near-infrared spectra, and early-time X-ray and radio data. The combined data of SNe 2017eaw and 2004et allow us to get an improved distance to the host galaxy, NGC 6946, as $D \sim 6.85$ $\pm 0.63$ Mpc; this fits in recent independent results on the distance of the host and disfavors the previously derived (30% shorter) distances based on SN 2004et. From modeling the nebular spectra and the quasi-bolometric light curve, we estimate the progenitor mass and some basic physical parameters for the explosion and the ejecta. Our results agree well with previous reports on a RSG progenitor star with a mass of $\sim15-16$ M$_\odot$. Our estimation on the pre-explosion mass-loss rate ($\dot{M} \sim3 \times 10^{-7} -$ $1\times 10^{-6} M_{\odot}$ yr$^{-1}$) agrees well with previous results based on the opacity of the dust shell enshrouding the progenitor, but it is orders of magnitude lower than previous estimates based on general light-curve modeling of Type II-P SNe. Combining late-time optical and mid-infrared data, a clear excess at 4.5 $\mu$m can be seen, supporting the previous statements on the (moderate) dust formation in the vicinity of SN 2017eaw., Comment: 34 pages, 19 figures, 7 tables; accepted for publication in ApJ
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- 2019
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227. Density Functional Theory of the Hubbard-Holstein Model
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Boström, E. Viñas, Helmer, P., Werner, P., and Verdozzi, C.
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Condensed Matter - Strongly Correlated Electrons ,Condensed Matter - Mesoscale and Nanoscale Physics ,Condensed Matter - Quantum Gases - Abstract
We present a density functional theory (DFT) for lattice models with local electron-electron (e-e) and electron-phonon (e-ph) interactions. Exchange-correlation potentials are derived via dynamical mean field theory for the infinite-dimensional Bethe lattice, and analytically for an isolated Hubbard-Holstein site. These potentials exhibit discontinuities as a function of the density, which depend on the relative strength of the e-e and e-ph interactions. By comparing to exact benchmarks, we show that the DFT formalism gives a good description of the linear conductance and real-time dynamics., Comment: 5 pages, 3 figures, supplemental material provided as pdf
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- 2019
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228. Recommendation of RILEM TC 256-SPF on the method of testing concrete spalling due to fire: material screening test
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Pimienta, Pierre, McNamee, Robert, Hager, Izabela, Mróz, Katarzyna, Boström, Lars, Mohaine, Siyimane, Huang, Shan-Shan, Mindeguia, Jean-Christophe, Robert, Fabienne, Davie, Colin, Felicetti, Roberto, Miah, Md Jihad, Lion, Maxime, Lo Monte, Francesco, Ozawa, Mitsuo, Rickard, Ieuan, Sideris, Kosmas, Alonso, Maria Cruz, Millard, Alain, Jumppanen, Ulla-Maija, Bodnarova, Lenka, Bosnjak, Josipa, Dal Pont, Stefano, Dao, Vinh, Dauti, Dorjan, Dehn, Frank, Hela, Rudolf, Hozjan, Tomaz, Juknat, Michael, Kirnbauer, Johannes, Kolsek, Jerneja, Korzen, Manfred, Lakhani, Hitesh, Maluk, Cristian, Meftah, Fekri, Moreau, Bérénice, Pesavento, Francesco, Pham, Duc Toan, Pistol, Klaus, Correia Rodrigues, Joao Paulo, Roosefid, Mohsen, Schneider, Martin, Sharma, Umesh Kumar, Stelzner, Ludwig, Weber, Benedikt, and Weise, Frank
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- 2023
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229. Anesthesia-induced loss of consciousness disrupts auditory responses beyond primary cortex
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Krom, Aaron J, Marmelshtein, Amit, Gelbard-Sagiv, Hagar, Tankus, Ariel, Hayat, Hanna, Hayat, Daniel, Matot, Idit, Strauss, Ido, Fahoum, Firas, Soehle, Martin, Boström, Jan, Mormann, Florian, Fried, Itzhak, and Nir, Yuval
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Biomedical and Clinical Sciences ,Neurosciences ,2.1 Biological and endogenous factors ,Aetiology ,Anesthesia ,Anesthetics ,Intravenous ,Auditory Cortex ,Electrocorticography ,Evoked Potentials ,Auditory ,Female ,Humans ,Male ,Propofol ,Unconsciousness ,Wakefulness ,propofol ,human ,single-unit ,LFP ,gamma power - Abstract
Despite its ubiquitous use in medicine, and extensive knowledge of its molecular and cellular effects, how anesthesia induces loss of consciousness (LOC) and affects sensory processing remains poorly understood. Specifically, it is unclear whether anesthesia primarily disrupts thalamocortical relay or intercortical signaling. Here we recorded intracranial electroencephalogram (iEEG), local field potentials (LFPs), and single-unit activity in patients during wakefulness and light anesthesia. Propofol infusion was gradually increased while auditory stimuli were presented and patients responded to a target stimulus until they became unresponsive. We found widespread iEEG responses in association cortices during wakefulness, which were attenuated and restricted to auditory regions upon LOC. Neuronal spiking and LFP responses in primary auditory cortex (PAC) persisted after LOC, while responses in higher-order auditory regions were variable, with neuronal spiking largely attenuated. Gamma power induced by word stimuli increased after LOC while its frequency profile slowed, thus differing from local spiking activity. In summary, anesthesia-induced LOC disrupts auditory processing in association cortices while relatively sparing responses in PAC, opening new avenues for future research into mechanisms of LOC and the design of anesthetic monitoring devices.
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- 2020
230. Rosuvastatin Prevents the Exacerbation of Atherosclerosis in Ligature-Induced Periodontal Disease Mouse Model.
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Suh, Jin, Lee, Sung, Fouladian, Zachary, Lee, Jae, Kim, Terresa, Kang, Mo, Lusis, Aldons, Boström, Kristina, Park, No-Hee, and Kim, Reuben
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Animals ,Atherosclerosis ,Cell Line ,Cytokines ,Human Umbilical Vein Endothelial Cells ,Humans ,Inflammation ,Male ,Mice ,Mice ,Knockout ,ApoE ,Osteoclasts ,Periodontitis ,Rosuvastatin Calcium ,Sinus of Valsalva - Abstract
Periodontitis is a local and systemic inflammatory condition and a risk factor of atherosclerosis, but no studies investigated the effect of a statin on atherogenesis affected by severe periodontitis. In this study, we investigated the effect of rosuvastatin (RSV) on atherogenesis in Apolipoprotein E-deficient mice receiving silk ligature placement around the maxillary second molars. Mice with the ligature placement developed severe periodontitis and vascular inflammation. RSV significantly inhibited the development of periodontitis and vascular inflammation and remarkably blocked the increased lipid deposition and the atherogenic gene expression in the arterial wall and aortic sinus induced by severe periodontitis. To understand the mechanistic effect of RSV on periodontitis-associated atherogenesis, we investigated the in vitro effect of RSV on various effect of TNF-α, a major proinflammatory cytokine for periodontitis and atherogenesis. We found that RSV notably inhibited the TNF-α-induced osteoclast formation, endothelial cell phenotypic changes, foam cell formation, and the expression of CD47 and other oncogenes in arterial smooth muscle cells. Taken together, our study indicates that RSV prevents the exacerbation of atherosclerosis induced periodontitis by inhibiting local, systemic and vascular inflammation, as well as the expression of CD47 from arterial smooth muscle cells in mice.
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- 2020
231. Skip is essential for Notch signaling to induce Sox2 in cerebral arteriovenous malformations
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Zhang, Daoqin, Qiao, Xiaojing, Wang, Lumin, Zhang, Li, Yao, Jiayi, Wu, Xiuju, Yu, Tongtong, Boström, Kristina I, and Yao, Yucheng
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Biochemistry and Cell Biology ,Biological Sciences ,Neurosciences ,Genetics ,Pediatric ,Congenital Structural Anomalies ,Lung ,Animals ,Brain ,DNA ,Endothelial Cells ,Humans ,Intracranial Arteriovenous Malformations ,Mice ,Inbred C57BL ,Models ,Biological ,Nuclear Receptor Coactivators ,Protein Binding ,Proteins ,Pulmonary Artery ,Receptors ,Notch ,SOXB1 Transcription Factors ,Signal Transduction ,Transcription Factors ,Medical Physiology ,Biochemistry & Molecular Biology ,Biochemistry and cell biology - Abstract
Notch signaling and Sry-box (Sox) family transcriptional factors both play critical roles in endothelial cell (EC) differentiation in vascularization. Recent studies have shown that excessive Notch signaling induces Sox2 to cause cerebral arteriovenous malformations (AVMs). Here, we examine human pulmonary AVMs and find no induction of Sox2. Results of epigenetic studies also show less alteration of Sox2-DNA binding in pulmonary AVMs than in cerebral AVMs. We identify high expression of ski-interacting protein (Skip) in brain ECs, a Notch-associated chromatin-modifying protein that is lacking in lung ECs. Knockdown of Skip abolished Notch-induction of Sox2 in brain ECs, while restoration of Skip in lung ECs enabled Notch-mediated Sox2 induction. The results suggest that Skip is a key factor for induction of Sox2 in cerebral AVMs.
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- 2020
232. Homeobox D3, A Novel Link Between Bone Morphogenetic Protein 9 and Transforming Growth Factor Beta 1 Signaling
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Wang, Lumin, Yao, Jiayi, Yu, Tongtong, Zhang, Daoqin, Qiao, Xiaojing, Yao, Zehao, Wu, Xiuju, Zhang, Li, Boström, Kristina I, and Yao, Yucheng
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Microbiology ,Biochemistry and Cell Biology ,Biological Sciences ,Heart Disease ,Heart Disease - Coronary Heart Disease ,Genetics ,Cardiovascular ,Activin Receptors ,Type II ,Animals ,DNA-Binding Proteins ,Endothelium ,Vascular ,Gene Expression Regulation ,Growth Differentiation Factor 2 ,Human Umbilical Vein Endothelial Cells ,Humans ,Mice ,Mice ,Inbred C57BL ,Mice ,Knockout ,Neovascularization ,Physiologic ,Phosphorylation ,Proteins ,Receptors ,Notch ,Signal Transduction ,Transforming Growth Factor beta1 ,endothelium ,bone morphogenetic protein ,Notch ,activin receptor-like kinase 1 ,vascular development ,Medicinal and Biomolecular Chemistry ,Biochemistry & Molecular Biology ,Biochemistry and cell biology - Abstract
AimsSeveral signaling pathways contribute to endothelial-mesenchymal transitions and vascular calcification, including bone morphogenetic protein (BMP) and transforming growth factor (TGF) β signaling. The transcription factor homeobox D3 (Hoxd3) is known to regulate an invasive endothelial phenotype, and the aim of the study is to determine if HOXD3 modulates BMP and TGFβ signaling in the endothelium.Methods and researchWe report that the endothelium with high BMP activity due to the loss of BMP inhibitor matrix Gla protein (MGP) shows induction of Hoxd3. HOXD3 is part of a BMP-triggered cascade. When activated by BMP9, activin receptor-like kinase (ALK) 1 induces HOXD3 expression. Hoxd3 promoter is a direct target of phosphorylated (p) SMAD1, a mediator of BMP signaling. High BMP activity further results in enhanced TGFβ signaling due to induction of TGFβ1 and its receptor, ALK5. This is mediated by HOXD3, which directly targets the Tgfb1 promoter. Finally, TGFβ1 and BMP9 stimulate the expression of MGP, which limits the enhanced ALK1 induction by counteracting BMP4. The cascade of BMP9-HOXD3-TGFβ also affects Notch signaling and angiogenesis through induction of Notch ligand Jagged 2 and suppression of Notch ligand delta-like 4 (Dll4).ConclusionThe results suggest that HOXD3 is a novel link between BMP9/ALK1 and TGFβ1/ALK5 signaling.Translational perspectiveBMP and TGFβ signaling are instrumental in vascular disease such as vascular calcification and atherosclerosis. This study demonstrated a novel type of cross talk between endothelial BMP and TGFβ signaling as mediated by HOXD3. The results provide a possible therapeutic approach to control dysfunctional BMP and TGFβ signaling by regulating HOXD3.
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- 2020
233. Everyday Practices in Swedish School-Age Educare Centres: A Reproduction of Subordination and Difficulty in Fulfilling Their Mission
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Haglund, Björn and Boström, Lena
- Abstract
Research directed at institutions focusing on diverse aspects of childrens social and cognitive development outside school is a growing field. This article discusses Swedish school-age educare centres for children between 6-12 years of age before and after school. These centres are regarded as important for young children's learning and care, although national statistics and an increasing amount of research shows that the preconditions for fulfilling these assignments are not favourable. This case study is based on Giddens' theory of structuration and studies staff at three educare centres using a mix of different methods, including interviews, observations and vignettes. The staff assert that their work is regarded as subordinate to that of class teachers. This is demonstrated by distant management, a fragmented working day and a lack of time for planning the work. These conditions are seen to affect the quality and the staff´s opportunities to fulfil their mission.
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- 2022
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234. Deep learning prediction of non-perfused volume without contrast agents during prostate ablation therapy
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Wright, Cameron, Mäkelä, Pietari, Bigot, Alexandre, Anttinen, Mikael, Boström, Peter J., and Blanco Sequeiros, Roberto
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- 2023
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235. Flare on [18F]PSMA-1007 PET/CT after short-term androgen deprivation therapy and its correlation to FDG uptake: possible marker of tumor aggressiveness in treatment-naïve metastatic prostate cancer patients
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Malaspina, Simona, Ettala, Otto, Tolvanen, Tuula, Rajander, Johan, Eskola, Olli, Boström, Peter. J., and Kemppainen, Jukka
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- 2023
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236. Results of a worldwide survey on the currently used histopathological diagnostic criteria for invasive lobular breast cancer
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De Schepper, Maxim, Vincent-Salomon, Anne, Christgen, Matthias, Van Baelen, Karen, Richard, François, Tsuda, Hitoshi, Kurozumi, Sasagu, Brito, Maria Jose, Cserni, Gabor, Schnitt, Stuart, Larsimont, Denis, Kulka, Janina, Fernandez, Pedro Luis, Rodríguez-Martínez, Paula, Olivar, Ana Aula, Melendez, Cristina, Van Bockstal, Mieke, Kovacs, Aniko, Varga, Zsuzsanna, Wesseling, Jelle, Bhargava, Rohit, Boström, Pia, Franchet, Camille, Zambuko, Blessing, Matute, Gustavo, Mueller, Sophie, Berghian, Anca, Rakha, Emad, van Diest, Paul J., Oesterreich, Steffi, Derksen, Patrick W. B., Floris, Giuseppe, and Desmedt, Christine
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- 2022
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237. Creating Clarity and Crew Courage: Preventive and Promotive Measures for a Maritime Industry Without Bullying and Harassment
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Boström, Magnus and Österman, Cecilia
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- 2022
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238. Young People's Opinions on Rural Sweden
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Boström, Lena and Dahlin, Rolf
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This study focus on adolescents motivations about remaining in rural areas in the Mid Sweden Region, a part of Sweden with decreasing school performance scores and high out-migration. The study is based on 1,500 young people's responses to a Web-based survey within the framework of a regional school development project. The research questions focused on: whether youths were going to stay there or move the future in urban or rural areas, influences, and the future choices and differences among genders, regions, and age groups. The empirical data are processed with statistical analysis. The study confirms previous research on young people's relocations from rural areas; jobs and education are important motives, and the most prone to move are women. What is new knowledge is that lessons about the region's importance have a positive, significant effect on individuals' plans to remain in their home municipality. This can and should be highlighted in local, regional, and national politics, but more importantly in school discourses. Since school plays a role in students' thinking and future choices, a larger formation effort could be of great value for norms and regional political standpoints. The study has relevance to the international terms of similar geographical areas.
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- 2018
239. Lifelong Learning in Policy and Practice: The Case of Sweden
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Boström, Ann-Kristin
- Abstract
This paper describes the changes in lifelong learning policy that have taken place since the 1990s in Sweden. Policy documents regarding lifelong learning in Sweden have appeared since 1994. The first of these documents contains general recommendations with regard to lifelong learning, in both a lifelong and a lifewide perspective, concerning pre-school and compulsory school together with adult education and training. Much support for early stages in life can have a tendency to put adult education and learning in second place instead of the whole functioning well together. Regarding lifelong learning in practice, this paper will focus on popular education and study circles. The recently developed knitting cafés will also be accounted for. The paper also asks the question "Who is getting education and learning in later life?" "What are the criteria that will give individuals access to these possibilities" and "What results can be expected?" The theoretical perspective taken in this paper is that social capital is a part of wellbeing, and the paper examines the extent to which this is connected to the social context.
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- 2017
240. Spatial Control of Multiphoton Electron Excitations in InAs Nanowires by Varying Crystal Phase and Light Polarization
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Mårsell, Erik, Boström, Emil, Harth, Anne, Losquin, Arthur, Guo, Chen, Cheng, Yu-Chen, Lorek, Eleonora, Lehmann, Sebastian, Nylund, Gustav, Stankovski, Martin, Arnold, Cord L., Miranda, Miguel, Dick, Kimberly A., Mauritsson, Johan, Verdozzi, Claudio, L'Huillier, Anne, and Mikkelsen, Anders
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Physics - Optics ,Condensed Matter - Mesoscale and Nanoscale Physics - Abstract
We demonstrate the control of multiphoton electron excitations in InAs nanowires (NWs) by altering the crystal structure and the light polarization. Using few-cycle, near-infrared laser pulses from an optical parametric chirped-pulse amplification system, we induce multiphoton electron excitations in InAs nanowires with controlled wurtzite (WZ) and zincblende (ZB) segments. With a photoemission electron microscope, we show that we can selectively induce multiphoton electron emission from WZ or ZB segments of the same wire by varying the light polarization. Developing \textit{ab-initio GW} calculations of 1st to 3rd order multiphoton excitations and using finite-difference time-domain simulations, we explain the experimental findings: While the electric-field enhancement due to the semiconductor/vacuum interface has a similar effect for all NW segments, the 2nd and 3rd order multiphoton transitions in the band structure of WZ InAs are highly anisotropic, in contrast to ZB InAs. As the crystal phase of NWs can be precisely and reliably tailored, our findings opens up for new semiconductor optoelectronics with controllable nanoscale emission of electrons through vacuum or dielectric barriers., Comment: 6 figures, 27 pages (including cover picture)
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- 2019
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241. Signatures of Circumstellar Interaction in the Type IIL Supernova ASASSN-15oz
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Bostroem, K. Azalee, Valenti, Stefano, Horesh, Assaf, Morozova, Viktoriya, Kuin, N. Paul M., Wyatt, Samuel, Jerkstrand, Anders, Sand, David J., Lundquist, Michael, Smith, Mathew, Sullivan, Mark, Hosseinzadeh, Griffin, Arcavi, Iair, Callis, Emma, Cartier, Régis, Gal-Yam, Avishay, Galbany, Lluís, Gutiérrez, Claudia, Howell, D. Andrew, Inserra, Cosimo, Kankare, Erkki, López, Kristhell Marisol, McCully, Curtis, Pignata, Giuliano, Piro, Anthony L., Rodríguez, Ósmar, Smartt, Stephen J., Smith, Kenneth W., Yaron, Ofer, and Young, David R.
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Astrophysics - Solar and Stellar Astrophysics ,Astrophysics - High Energy Astrophysical Phenomena - Abstract
Hydrogen-rich, core-collapse supernovae are typically divided into four classes: IIP, IIL, IIn, and IIb. In general, interaction with circumstellar material is only considered for Type IIn supernovae. However, recent hydrodynamic modeling of IIP and IIL supernovae requires circumstellar material to reproduce their early light curves. In this scenario, IIL supernovae experience large amounts of mass loss before exploding. We test this hypothesis on ASASSN-15oz, a Type IIL supernova. With extensive follow-up in the X- ray, UV, optical, IR, and radio we present our search for signs of interaction, and the mass-loss history indicated by their detection. We find evidence of short-lived intense mass-loss just prior to explosion from light curve modeling, amounting in 1.5 M$_{\odot}$ of material within 1800 R$_{\odot}$ of the progenitor. We also detect the supernova in the radio, indicating mass-loss rates of $10^{-6}-10^{-7}$ M$_{\odot}$ yr$^{-1}$ prior to the extreme mass-loss period. Our failure to detect the supernova in the X-ray and the lack of narrow emission lines in the UV, optical, and NIR do not contradict this picture and place an upper limit on the mass-loss rate outside the extreme period of $<10^{-4}$ M$_{\odot}$ yr$^{-1}$. This paper highlights the importance gathering comprehensive data on more Type II supernovae to enable detailed modeling of the progenitor and supernova which can elucidate their mass-loss histories and envelope structures and thus inform stellar evolution models., Comment: Submitted to MNRAS including referee comments
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- 2019
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242. Stereotactic radiosurgery and radiotherapy for resected brain metastases: current pattern of care in the Radiosurgery and Stereotactic Radiotherapy Working Group of the German Association for Radiation Oncology (DEGRO)
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Rogers, S., Baumert, B., Blanck, O., Böhmer, D., Boström, J., Engenhart-Cabillic, R., Ermis, E., Exner, S., Guckenberger, M., Habermehl, D., Hemmatazad, H., Henke, G., Lohaus, F., Lux, S., Mai, S., Minasch, D., Rezazadeh, A., Steffal, C., Temming, S., Wittig, A., Zweifel, C., Riesterer, O., and Combs, S. E.
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- 2022
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243. Steering Magnetic Skyrmions with Nonequilibrium Green's Functions
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Boström, Emil Viñas and Verdozzi, Claudio
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Condensed Matter - Mesoscale and Nanoscale Physics ,Condensed Matter - Materials Science ,Condensed Matter - Other Condensed Matter - Abstract
Magnetic skyrmions, topologically protected vortex-like configurations in spin textures, are of wide conceptual and practical appeal for quantum information technologies, notably in relation to the making of so-called race-track memory devices. Skyrmions can be created, steered and destroyed with magnetic fields and/or (spin) currents. Here we focus on the latter mechanism, analyzed via a microscopic treatment of the skyrmion-current interaction. The system we consider is an isolated skyrmion in a square-lattice cluster, interacting with electrons spins in a current-carrying quantum wire. For the theoretical description, we employ a quantum formulation of spin-dependent currents via nonequilibrium Green's functions (NEGF) within the generalized Kadanoff-Baym ansatz (GKBA). This is combined with a treatment of skyrmions based on classical localized spins, with the skyrmion motion described via Ehrenfest dynamics. With our mixed quantum-classical scheme, we assess how time-dependent currents can affect the skyrmion dynamics, and how this in turn depends on electron-electron and spin-orbit interactions in the wire. Our study shows the usefulness of a quantum-classical treatment of skyrmion steering via currents, as a way for example to validate/extract an effective, classical-only, description of skyrmion dynamics from a microscopic quantum modeling of the skyrmion-current interaction., Comment: 10 pages, 8 figures, contribution to the proceedings of "Progress in Nonequilibrium Green's Functions VII"
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- 2018
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244. Spectroscopy and level detuning of few-electron spin states in parallel InAs quantum dots
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Thelander, Claes, Nilsson, Malin, Boström, Florinda Viñas, Burke, Adam, Lehmann, Sebastian, Dick, Kimberly A., and Leijnse, Martin
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Condensed Matter - Mesoscale and Nanoscale Physics - Abstract
We use tunneling spectroscopy to study the evolution of few-electron spin states in parallel InAs nanowire double quantum dots (QDs) as a function of level detuning and applied magnetic field. Compared to the much more studied serial configuration, parallel coupling of the QDs to source and drain greatly expands the probing range of excited state transport. Owing to a strong confinement, we can here isolate transport involving only the very first interacting single QD orbital pair. For the (2,0)-(1,1) charge transition, with relevance for spin-based qubits, we investigate the excited (1,1) triplet, and hybridization of the (2,0) and (1,1) singlets. An applied magnetic field splits the (1,1) triplet, and due to spin-orbit induced mixing with the (2,0) singlet, we clearly resolve transport through all triplet states near the avoided singlet-triplet crossings. Transport calculations, based on a simple model with one orbital on each QD, fully replicate the experimental data. Finally, we observe an expected mirrored symmetry between the 1-2 and 2-3 electron transitions resulting from the two-fold spin degeneracy of the orbitals., Comment: 17 pages, 8 figures
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- 2018
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245. pwv_kpno: A Python Package for Modeling the Atmospheric Transmission Function due to Precipitable Water Vapor
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Perrefort, Daniel, Wood-Vasey, W. M., Bostroem, K. Azalee, Gilmore, Kirk, Joyce, Richard, and Corson, Charles
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Astrophysics - Instrumentation and Methods for Astrophysics - Abstract
We present a Python package, pwv_kpno, that provides models for the atmospheric transmission due to precipitable water vapor (PWV) at user specified sites. Using the package, ground-based photometric observations taken between $3,000$ and $12,000$ $\AA$ can be corrected for atmospheric effects due to PWV. Atmospheric transmission in the optical and near-infrared is highly dependent on the PWV column density along the line of sight. By measuring the delay of dual-band GPS signals through the atmosphere, the SuomiNet project provides accurate PWV measurements for hundreds of locations around the world. The pwv_kpno package uses published SuomiNet data in conjunction with MODTRAN models to determine the modeled, time-dependent atmospheric transmission. A dual-band GPS system was installed at Kitt Peak National Observatory (KPNO) in the spring of 2015. Using measurements from this receiver we demonstrate that we can successfully predict the PWV at KPNO from nearby dual-band GPS stations on the surrounding desert floor. The pwv_kpno package can thus provide atmospheric transmission functions for observations taken before the KPNO receiver was installed. Using PWV measurements from the desert floor, we correctly model PWV absorption features present in spectra taken at KPNO. We also demonstrate how to configure the package for use at other observatories.
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- 2018
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246. Impact of effective polarisability models on the predicted release dynamics of CH$_4$ and CO$_2$ from premelted ice
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Fiedler, J., Thiyam, P., Burger, F. A., Parsons, D. F., Walter, M., Brevik, I., Persson, C., Buhmann, S. Y., and Boström, M.
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Physics - Atmospheric and Oceanic Physics ,Physics - Chemical Physics - Abstract
We present a theory for Casimir--Polder forces acting on greenhouse gas molecules dissolved in a thin water film. Such a nanosized film has recently been predicted to arise on th surface of melting ice as stabilized by repulsive Lifshitz forces. We show that different models for the effective polarizability of greenhouse gas molecules in water lead to different predictions for how Casimir--Polder forces influence the extraction of CH$_4$ and CO$_2$ molecules from the melting ice surface. In the most intricate model of a finite-sized molecule inside a cavity, dispersion potentials push the methane molecules towards the ice surface whereas the carbon dioxide typically will be attracted towards the closest interface (ice or air). Previous models for effective polarizability had suggested that CO$_2$ would also be pushed towards the ice surface. Release of greenhouse gas molecules from the surface of melting ice can potentially influence climate greenhouse effects.
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- 2018
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247. Zeno-clocking the Auger decay
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Boström, Emil Viñas, Gisselbrecht, Mathieu, Brage, Tomas, Almbladh, Carl-Olof, Mikkelsen, Anders, and Verdozzi, Claudio
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Quantum Physics ,Condensed Matter - Mesoscale and Nanoscale Physics ,Physics - Atomic Physics - Abstract
A tenet of time-resolved spectroscopy is -faster laser pulses for shorter timescales- . Here we suggest turning this paradigm around, and slow down the system dynamics via repeated measurements, to do spectroscopy on longer timescales. This is the principle of the quantum Zeno effect. We exemplify our approach with the Auger process, and find that repeated measurements increase the core-hole lifetime, redistribute the kinetic energy of Auger electrons, and alter entanglement formation. We further provide an explicit experimental protocol for atomic Li, to make our proposal concrete., Comment: 5 pages, 4 figures, supplemental material provided
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- 2018
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248. Fluid sensitive nanoscale switching with quantum levitation controlled by $\alpha$-Sn/$\beta$-Sn phase transition
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Boström, Mathias, Dou, Maofeng, Malyi, Oleksandr I., Parashar, Prachi, Parsons, Drew F., Brevik, Iver, and Persson, Clas
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Condensed Matter - Other Condensed Matter ,Condensed Matter - Mesoscale and Nanoscale Physics - Abstract
We analyse the Lifshitz pressure between silica and tin separated by a liquid mixture of bromobenzene and chlorobenzene. We show that the phase transition from semimetallic $\alpha$-Sn to metallic $\beta$-Sn can switch Lifshitz forces from repulsive to attractive. This effect is caused by the difference in dielectric functions of $\alpha$-Sn and $\beta$-Sn, giving both attractive and repulsive contributions to the total Lifshitz pressure at different frequency regions controlled by the composition of the intervening liquid mixture. In this way, one may be able to produce phase transition-controlled quantum levitation in liquid medium., Comment: 9 pages, 11 figures (to be published in Phys. Rev. B)
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- 2018
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249. Tuning the two-electron hybridization and spin states in parallel-coupled InAs quantum dots
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Nilsson, Malin, Boström, Florinda Viñas, Lehmann, Sebastian, Dick, Kimberly A., Leijnse, Martin, and Thelander, Claes
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Condensed Matter - Mesoscale and Nanoscale Physics - Abstract
We study spin transport in the one- and two-electron regimes of parallel-coupled double quantum dots (DQDs). The DQDs are formed in InAs nanowires by a combination of crystal-phase engineering and electrostatic gating, with an interdot tunnel coupling ($t$) tunable by one order of magnitude. Large single-particle energy separations (up to 10 meV) and $|g^*|$ factors ($\sim$10) enable detailed studies of the $B$-field-induced transition from a singlet-to-triplet ground state as a function of $t$. In particular, we investigate how the magnitude of the spin-orbit-induced singlet-triplet anticrossing depends on $t$. For cases of strong coupling, we find values of 230 $\mu$eV for the anticrossing using excited-state spectroscopy. Experimental results are reproduced by calculations based on rate equations and a DQD model including a single orbital in each dot., Comment: 5 pages, 4 figures
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- 2018
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250. Angiopoietin-2 predicts morbidity in adults with Fontan physiology.
- Author
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Shirali, Aditya S, Lluri, Gentian, Guihard, Pierre J, Conrad, Miles B, Kim, Helen, Pawlikowska, Ludmila, Boström, Kristina I, Iruela-Arispe, M Luisa, and Aboulhosn, Jamil A
- Abstract
Morbidity in patients with single-ventricle Fontan circulation is common and includes arrhythmias, edema, and pulmonary arteriovenous malformations (PAVM) among others. We sought to identify biomarkers that may predict such complications. Twenty-five patients with Fontan physiology and 12 control patients with atrial septal defects (ASD) that underwent cardiac catheterization were included. Plasma was collected from the hepatic vein and superior vena cava and underwent protein profiling for a panel of 20 analytes involved in angiogenesis and endothelial dysfunction. Ten (40%) of Fontan patients had evidence of PAVM, eighteen (72%) had a history of arrhythmia, and five (20%) were actively in arrhythmia or had a recent arrhythmia. Angiopoietin-2 (Ang-2) was higher in Fontan patients (8,875.4 ± 3,336.9 pg/mL) versus the ASD group (1,663.6 ± 587.3 pg/mL, p
- Published
- 2019
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