221 results on '"Audet, Céline"'
Search Results
202. Charrs, glaciations and seasonal ice
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Power, Geoffrey, Balon, Eugene K., editor, Magnan, Pierre, editor, Audet, Céline, editor, Glémet, Hélène, editor, Legault, Michel, editor, Rodríguez, Marco A., editor, and Taylor, Eric B., editor
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- 2002
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203. Assessing fatty acid remodelling during embryogenesis in Greenland halibut ( Reinhardtius hippoglossoides) exposed to hypoxia.
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Mejri, Sahar, Tremblay, Réjean, Lambert, Yvan, and Audet, Céline
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GREENLAND halibut , *OMEGA-3 fatty acids , *FISH embryology , *DOCOSAHEXAENOIC acid , *EICOSAPENTAENOIC acid , *DISSOLVED oxygen in water - Abstract
Eggs of Greenland halibut ( Reinhardtius hippoglossoides) are subjected to hypoxic conditions in the deep waters of the Estuary and Gulf of St. Lawrence during their development. The aim of this study was to determine whether there was potential remodelling of fatty acids (FA) during embryogenesis in eggs exposed to several levels of dissolved oxygen (DO). Fertilized eggs from three females were exposed to four DO levels: severely hypoxic (10 and 20% sat [percent saturation]), moderately hypoxic (35% sat), and normoxic (100% sat). No FA remodelling was observed in eggs submitted to the different DO levels. The most abundant FA in the polar lipid fraction were docosahexaenoic (DHA, 22:6n-3) and eicosapentaenoic (EPA, 20:5n-3) acids (26 and 22%, respectively), the latter being positively correlated with hatching success. Batches with low hatching success were characterized by eggs with decreased levels of polar EPA and DHA at the end of embryogenesis. Whatever the hatching success, the proportion of FA in the neutral lipid fraction was always significantly lower compared to the polar lipid fraction. Oleic acid (18:1n-9; 17%) was the main FA found in this fraction; together with gondoic acid (20:1n-9), they explained most of the variation in hatching success. [ABSTRACT FROM AUTHOR]
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- 2017
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204. Effects of exposure to hypoxia on metabolic pathways in northern shrimp (Pandalus borealis) and Greenland halibut (Reinhardtius hippoglossoides).
- Author
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Pillet, Marion, Dupont-Prinet, Aurélie, Chabot, Denis, Tremblay, Réjean, and Audet, Céline
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HYPOXIA (Water) , *PANDALUS borealis , *GREENLAND halibut , *DISSOLVED oxygen in water , *CYTOCHROME oxidase , *POLYMERASE chain reaction - Abstract
In the Estuary and Gulf of St. Lawrence, northern shrimp ( Pandalus borealis ) and Greenland halibut ( Reinhardtius hippoglossoides ) are usually found at depths > 150 m and thus frequently inhabit hypoxic areas (18–50% saturation). The impact of a one-week exposure to different levels of dissolved oxygen (100, 40, 30, and 20% saturation) at 5 °C was evaluated in adult shrimp and juvenile Greenland halibut; the effect of acute exposure to severe hypoxia was also assessed in Greenland halibut. The activities of key enzymes involved in aerobic (citrate synthase [CS], cytochrome c oxidase [COX]) and anaerobic (pyruvate kinase [PK], phosphoenolpyruvate carboxykinase [PEPCK], lactate dehydrogenase [LDH]) pathways, and of enzymes involved in antioxidant defence (superoxide dismutase, glutathione peroxidase [GPx], and catalase [CAT]) were measured. Quantitative real-time PCR analysis was also performed in Greenland halibut. In northern shrimp exposed to chronic hypoxia, muscle CS activity decreased by ~ 40%. Muscle LDH activity was significantly reduced, with a more intense reduction in males. At the same time, hepatopancreas GPx activity increased under hypoxia, and this response was stronger in males. Overall, the results suggest the presence of a threshold above 40% saturation and higher hypoxia tolerance in males. In juvenile Greenland halibut, exposure to chronic hypoxia elicited a more wide-ranging enzymatic response than did acute exposure to severe hypoxia. Under chronic hypoxia, CS activity decreased and PK and LDH activity were respectively 46% and 57% lower than in normoxia. There were no major changes in the activity of antioxidant enzymes, but activity in normoxia was high compared to other fish species. Interestingly, the relative expression of genes coding for muscle COX (severe hypoxia), liver PEPCK (chronic), and CAT (chronic) activities were triggered in hypoxia. The absence of a corresponding change in enzyme activity makes the interpretation of these results difficult, but clearly there was a response at the transcription level. Overall, the results indicate that these two species are particularly well adapted to withstand severe hypoxia. [ABSTRACT FROM AUTHOR]
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- 2016
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205. Regional variation of gene regulation associated with storage lipid metabolism in American glass eels (Anguilla rostrata).
- Author
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Gaillard, Mélanie, Pavey, Scott A., Côté, Caroline L., Tremblay, Réjean, Bernatchez, Louis, and Audet, Céline
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GLASS eels , *GENETIC regulation , *LIPID metabolism , *MESSENGER RNA , *GHRELIN - Abstract
Variation in gene regulation may be involved in the differences observed for life history traits within species. American eel ( Anguilla rostrata ) is well known to harbor distinct ecotypes within a single panmictic population. We examined the expression of genes involved in the regulation of appetite as well as lipid and glycogen among glass eels migrating to different locations on the Canadian east coast and captured at two different periods of upstream migration. Gene expression levels of three reference and five candidate genes were analyzed by real-time PCR with Taqman probes in recently captured wild glass eels. All gene transcripts were detected in glass eels. Of the five candidate genes, bile salt activated and triacylglycerol lipases were respectively 7.65 and 3.25 times more expressed in glass eels from the St. Lawrence estuary than in those from Nova Scotia, and there was no effect related to the two-week difference in capture date. These two genes explained 82.41% of the dissimilarity between the two rivers. In contrast, glycogen phosphorylase, ghrelin, and leptin receptor genes showed no significant differences in gene transcription. These results confirmed at the molecular level an observation that was recently made at the phenotypic level that glass eels from the St. Lawrence estuary have a greater capacity to use lipid reserves to sustain their metabolic needs. These observations add to the body of evidence supporting the hypothesis that regional phenotypic variation observed in American eel is determined early in life and that part of this variation is likely under genetic control. [ABSTRACT FROM AUTHOR]
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- 2016
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206. Growth regulation in brook charr Salvelinus fontinalis.
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Martinez-Silva, Maria Angelica, Dupont-Prinet, Aurélie, Houle, Carolyne, Vagner, Marie, Garant, Dany, Bernatchez, Louis, and Audet, Céline
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BROOK trout , *REGULATION of growth , *LEPTIN receptors , *MUSCLE growth , *FISH growth , *ENTEROENDOCRINE cells , *Y chromosome - Abstract
Fish growth can be modulated through genetic selection. However, it is not known whether growth regulatory mechanisms modulated by genetic selection can provide information about phenotypic growth variations among families or populations. Following a five-generation breeding program that selected for the absence of early sexual maturity and increased growth in brook charr we aimed to understand how the genetic selection process modifies the growth regulatory pathway of brook charr at the molecular level. To achieve this, we studied the regulation of growth traits at three different levels: 1) between lines—one under selection, the other not, 2) among-families expressing differences in average growth phenotypes, which we termed family performance, and 3) among individuals within families that expressed extreme growth phenotypes, which we termed slow- and fast-growing. At age 1+, individuals from four of the highest performing and four of the lowest performing families in terms of growth were sampled in both the control and selected lines. The gene expression levels of three reference and ten target genes were analyzed by real-time PCR. Results showed that better growth performance (in terms of weight and length at age) in the selected line was associated with an upregulation in the expression of genes involved in the growth hormone (GH)/insulin growth factor-1 (IGF-1) axis, including the igf-1 receptor in pituitary; the gh-1 receptor and igf-1 in liver; and ghr and igf-1r in white muscle. When looking at gene expression within families, family performance and individual phenotypes were associated with upregulations of the leptin receptor and neuropeptid Y —genes related to appetite regulation—in the slower-growing phenotypes. However, other genes related to appetite (ghrelin, somatostatin) or involved in muscle growth (myosin heavy chain, myogenin) were not differentially expressed. This study highlights how transcriptomics may improve our understanding of the roles of different key endocrine steps that regulate physiological performance. Large variations in growth still exist in the selected line, indicating that the full genetic selection potential has not been reached. • Selection upregulate the gh/igf-1 axis with no effect on appetite or muscle growth. • Phenotype differences in both lines are related to appetite regulation. • Upregulation of lepr is related to individual and familial slow performance. • Liver igf-1 , muscle ghr and igf-1r are good indicators of growth among lines. [ABSTRACT FROM AUTHOR]
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- 2023
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207. Regional variation in energy storage strategies in American glass eels from Eastern Canada.
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Gaillard, Mélanie, Bernatchez, Louis, Tremblay, Réjean, and Audet, Céline
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GLASS eels , *FISH bioenergetics , *STREAM salinity , *GLYCOGEN , *PHOSPHOLIPIDS - Abstract
Energy status was analyzed in glass eels captured during two early waves of arrival at the mouths of the Mersey River, Nova Scotia, Canada (MR), and Grande-Rivière-Blanche, Québec, Canada (GRB), and according to their salinity preference (freshwater, brackish, or saltwater). Glass eels captured in the GRB estuary were larger, more pigmented, and exhibited higher whole-body glycogen, phospholipid, and sterol and wax ester contents. Those from MR had a higher condition index and a higher whole-body triacylglycerol content, suggesting different patterns of storage and/or use of energy reserves. Within a river, a delay of two weeks in estuarine arrival was characterized by significantly lower energy reserves. No differences in energy storage were observed according to salinity preference. Thus, the results revealed the occurrence of different energy storage strategies according to glass eel migration distance and duration, but not according to salinity preference. [ABSTRACT FROM AUTHOR]
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- 2015
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208. Effects of algae-enriched rotifers on winter flounder ( Pseudopleuronectes americanus) gene expression during metamorphosis.
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Vagner, Marie, Montgolfier, Benjamin, Sévigny, Jean-Marie, Tremblay, Réjean, and Audet, Céline
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METAMORPHOSIS , *ALGAE , *ROTIFERA , *WINTER flounder , *GENE expression in fishes , *FATTY acids - Abstract
The aim of this study was to evaluate the effect of a dietary highly unsaturated fatty acid (HUFA) deficiency on winter flounder Pseudopleuronectes americanus metamorphosis by examining the growth and the expression of genes involved in some key metabolic processes: lipid digestion, oxidative stress, and growth. Three groups of fish were fed rotifers enriched with different blends of microalgae providing different HUFA profiles: (1) a diet comprising a mixture of three microalgae, Nannochloropsis oculata, Isochrysis galbana, and Pavlova lutheri (Cocktail diet), which contained a balanced combination of ecosapentaenoic acid (EPA), docosahexaenoic acid (DHA), and arachidonic acid (AA); (2) the N. oculata diet (Nanno diet), with a low level of DHA; and (3) the I. galbana diet (Tiso diet), characterized by low levels of EPA and AA. The results indicate that the need for DHA increased from settlement and for EPA and AA from 15 days after settlement. The lower HUFA content in the Tiso and Nanno diets did not affect larval development or lipid reserve accumulation. The superoxide dismutase gene expression suggests a reduced oxidative stress in the Cocktail group, and overall results indicate that gh gene expression could be a valuable indicator of development at the molecular level in response to dietary HUFA quality during metamorphosis in winter flounder. [ABSTRACT FROM AUTHOR]
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- 2014
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209. Northern shrimp (Pandalus borealis) oxygen consumption and metabolic enzyme activities are severely constrained by hypoxia in the Estuary and Gulf of St. Lawrence.
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Dupont-Prinet, Aurélie, Pillet, Marion, Chabot, Denis, Hansen, Tanya, Tremblay, Réjean, and Audet, Céline
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PANDALUS borealis , *OXYGEN consumption , *SPECIES , *HYPOXIA (Water) , *ESTUARIES , *BIOCHEMISTRY - Abstract
Northern shrimp is an important commercial species in the Estuary and Gulf of St. Lawrence. It is usually found at depths >150m and thus frequently inhabits hypoxic areas (18–40% saturation) in this region. To evaluate the impact of hypoxia on adult shrimp, males and females were exposed to different levels of dissolved oxygen at two temperatures (5 and 8°C). Standard and maximal metabolic rates as well as the critical oxygen threshold were measured. In addition, metabolic and antioxidant enzyme activities were measured at 5°C. Females had a higher critical oxygen threshold than males at both temperatures (15.5 and 22.2 vs. 9.0 and 13.8 at 5 and 8°C respectively), indicating that they were less tolerant of hypoxia. A decrease in glycolytic and fermentation enzyme activities confirmed this result: in females, severe hypoxia significantly decreased the specific activities of citrate synthase and of enzymes involved in anaerobic biochemical pathways (lactate dehydrogenase, pyruvate kinase, and phosphoenolpyruvate carboxykinase (PEPCK)); in males, only the PEPCK activity decreased significantly while glutathione peroxidase (antioxidant defense) activity increased significantly. In females, severe hypoxia (22% sat.) did not affect the standard metabolic rate but significantly reduced (by ~43%) the maximum metabolic rate compared to normoxia. Consequently, aerobic scope was reduced by ~58% at 22% sat. compared to normoxia. This suggests that the shrimp's flexibility to respond to metabolic demands, including such activities as vertical migration, foraging, and egg production, could be reduced in hypoxic conditions, especially in females. [ABSTRACT FROM AUTHOR]
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- 2013
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210. Behavioural responses to acute warming precede critical shifts in the cellular and physiological thermal stress responses in a salmonid fish (brook trout, Salvelinus fontinalis).
- Author
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Durhack TC, Thorstensen MJ, Mackey TE, Aminot M, Lawrence MJ, Audet C, Enders EC, and Jeffries KM
- Abstract
From a conservation perspective, it is important to identify when sub-lethal temperatures begin to adversely impact an organism. However, it is unclear whether, during acute exposures, sub-lethal cellular thresholds occur at similar temperatures to other physiological or behavioural changes, or at temperatures associated with common physiological endpoints measured in fishes to estimate thermal tolerance. To test this, we estimated temperature preference (15.1±1.1°C) using a shuttle box, agitation temperature (22.0±1.4°C) as the point where a fish exhibits a behavioural avoidance response and the CTmax (28.2±0.4°C) as the upper thermal limit for 1 yr old brook trout (Salvelinus fontinalis) acclimated to 10°C. We then acutely exposed a different subset of fish to the mean temperatures associated with the pre-determined physiological endpoints and sampled tissues when they reached the target temperature or after 60 min of recovery at 10°C for transcriptomic analysis. We used qPCR to estimate mRNA transcript levels of genes associated with heat shock proteins, oxidative stress, apoptosis, and inducible transcription factors. A major shift in the transcriptome response occurred once the agitation temperature was reached, which may identify a possible link between the cellular stress response and the behavioural avoidance response., (© 2025. Published by The Company of Biologists.)
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- 2025
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211. Parental thermal environment controls the offspring phenotype in Brook charr (Salvelinus fontinalis): insights from a transcriptomic study.
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Banousse G, Normandeau E, Semeniuk C, Bernatchez L, and Audet C
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- Animals, Temperature, Gene Expression Profiling, Female, Male, Brain metabolism, Epigenesis, Genetic, Trout genetics, Phenotype, Transcriptome, DNA Methylation
- Abstract
Brook charr is a cold-water species which is highly sensitive to increased water temperatures, such as those associated with climate change. Environmental variation can potentially induce phenotypic changes that are inherited across generations, for instance, via epigenetic mechanisms. Here, we tested whether parental thermal regimes (intergenerational plasticity) and offspring-rearing temperatures (within-generational plasticity) modify the brain transcriptome of Brook charr progeny (fry stage). Parents were exposed to either cold or warm temperatures during final gonad maturation and their progeny were reared at 5 or 8 °C during the first stages of development. Illumina Novaseq6000 was used to sequence the brain transcriptome at the yolk sac resorption stage. The number of differentially expressed genes was very low when comparing fry reared at different temperatures (79 differentially expressed genes). In contrast, 9,050 differentially expressed genes were significantly differentially expressed between fry issued from parents exposed to either cold or warm temperatures. There was a significant downregulation of processes related to neural and synaptic activity in fry originating from the warm parental group vs fry from the cold parental one. We also observed significant upregulation of DNA methylation genes and of the most salient processes associated with compensation to warming, such as metabolism, cellular response to stress, and adaptive immunity., Competing Interests: Conflicts of interest The authors declare no conflict of interest., (© The Author(s) 2024. Published by Oxford University Press on behalf of The Genetics Society of America.)
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- 2024
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212. Evaluation of different extractions for the metabolite identification of malachite green in brook trout and shrimp.
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Baesu A, Audet C, and Bayen S
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- Animals, Crustacea, Trout, Rosaniline Dyes, Seafood analysis
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Applications of mass spectrometry-based metabolomics in food science have developed fast in the last decade. Sample preparation and data processing are critical in non-target/metabolomic workflows but there is currently no standardized protocol for the development of these methods. The impact of data processing parameters or the inclusion of a different matrix is not often taken into account during the selection of an extraction. Thus, this study aimed to investigate the impact of different extractions, e.g., QuEChERS, and data processing on the determination of malachite green metabolites in two different organisms, brook trout and shrimp. The results obtained confirm the need for a harmonized approach for the validation of non-target workflows, as depending on the comparison criteria, the matrix, the mode of ionization or data processing, a different extraction could be chosen. This study also identified for the first time des-methylated leucomalachite green as another metabolite in the two organisms., (Copyright © 2021 Elsevier Ltd. All rights reserved.)
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- 2022
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213. Application of non-target analysis to study the thermal transformation of malachite and leucomalachite green in brook trout and shrimp.
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Baesu A, Audet C, and Bayen S
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The fate of malachite green and its main metabolite leucomalachite green during thermal treatment was examined in seafood (brook trout and white shrimp) using non-target analysis. Samples were extracted using QuEChERS and analyzed using liquid chromatography coupled with quadruple time of flight mass spectrometry. Malachite green levels were reduced in meat during boiling (∼40%), microwaving (64%), and canning (96%). Only microwaving was successful in significantly decreasing leucomalachite green levels in brook trout. The reduction percentages of the two target analytes were not significantly different in shrimp (mean fat content = 0.8 ± 0.3%) and in brook trout (mean fat content = 3.5 ± 1.7%), suggesting that a higher fat content may not affect the reduction of the more lipophilic leucomalachite green in these two matrices. Three transformation products were tentatively identified in the cooked tissues, resulting from the cleavage of the conjugated structure or through demethylation. Further research is needed to determine possible adverse health effects. The findings of this study show how non-target analysis can complement targeted methodologies in identifying and evaluating risks to human health., Competing Interests: The authors report no conflict of interest for the following manuscript submitted for your review (Original Article):, (© 2021 The Authors.)
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- 2021
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214. Sex-Specific Co-expression Networks and Sex-Biased Gene Expression in the Salmonid Brook Charr Salvelinus fontinalis .
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Sutherland BJG, Prokkola JM, Audet C, and Bernatchez L
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- Animals, Female, Gene Expression Regulation, Gene Regulatory Networks, Male, Sequence Analysis, RNA, Trout physiology, Sex Characteristics, Transcriptome, Trout genetics
- Abstract
Networks of co-expressed genes produce complex phenotypes associated with functional novelty. Sex differences in gene expression levels or in the structure of gene co-expression networks can cause sexual dimorphism and may resolve sexually antagonistic selection. Here we used RNA-sequencing in the salmonid Brook Charr Salvelinus fontinalis to characterize sex-specific co-expression networks in the liver of 47 female and 53 male offspring. In both networks, modules were characterized for functional enrichment, hub gene identification, and associations with 15 growth, reproduction, and stress-related phenotypes. Modules were then evaluated for preservation in the opposite sex, and in the congener Arctic Charr Salvelinus alpinus Overall, more transcripts were assigned to a module in the female network than in the male network, which coincided with higher inter-individual gene expression and phenotype variation in the females. Most modules were preserved between sexes and species, including those involved in conserved cellular processes ( e.g. , translation, immune pathways). However, two sex-specific male modules were identified, and these may contribute to sexual dimorphism. To compare with the network analysis, differentially expressed transcripts were identified between the sexes, revealing a total of 16% of expressed transcripts as sex-biased. For both sexes, there was no overrepresentation of sex-biased genes or sex-specific modules on the putative sex chromosome. Sex-biased transcripts were also not overrepresented in sex-specific modules, and in fact highly male-biased transcripts were enriched in preserved modules. Comparative network analysis and differential expression analyses identified different aspects of sex differences in gene expression, and both provided new insights on the genes underlying sexual dimorphism in the salmonid Brook Charr., (Copyright © 2019 Sutherland et al.)
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- 2019
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215. Sex Chromosome Evolution, Heterochiasmy, and Physiological QTL in the Salmonid Brook Charr Salvelinus fontinalis .
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Sutherland BJG, Rico C, Audet C, and Bernatchez L
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- Animals, Chromosome Mapping, Crossing Over, Genetic, Female, Genetic Linkage, Male, Recombination, Genetic genetics, Reproduction genetics, Salmonidae growth & development, Stress, Physiological genetics, Evolution, Molecular, Quantitative Trait Loci genetics, Salmonidae genetics, Salmonidae physiology, Sex Chromosomes genetics
- Abstract
Whole-genome duplication (WGD) can have large impacts on genome evolution, and much remains unknown about these impacts. This includes the mechanisms of coping with a duplicated sex determination system and whether this has an impact on increasing the diversity of sex determination mechanisms. Other impacts include sexual conflict, where alleles having different optimums in each sex can result in sequestration of genes into nonrecombining sex chromosomes. Sex chromosome development itself may involve sex-specific recombination rate ( i.e. , heterochiasmy), which is also poorly understood. The family Salmonidae is a model system for these phenomena, having undergone autotetraploidization and subsequent rediploidization in most of the genome at the base of the lineage. The salmonid master sex determining gene is known, and many species have nonhomologous sex chromosomes, putatively due to transposition of this gene. In this study, we identify the sex chromosome of Brook Charr Salvelinus fontinalis and compare sex chromosome identities across the lineage (eight species and four genera). Although nonhomology is frequent, homologous sex chromosomes and other consistencies are present in distantly related species, indicating probable convergence on specific sex and neo-sex chromosomes. We also characterize strong heterochiasmy with 2.7-fold more crossovers in maternal than paternal haplotypes with paternal crossovers biased to chromosome ends. When considering only rediploidized chromosomes, the overall heterochiasmy trend remains, although with only 1.9-fold more recombination in the female than the male. Y chromosome crossovers are restricted to a single end of the chromosome, and this chromosome contains a large interspecific inversion, although its status between males and females remains unknown. Finally, we identify quantitative trait loci (QTL) for 21 unique growth, reproductive, and stress-related phenotypes to improve knowledge of the genetic architecture of these traits important to aquaculture and evolution., (Copyright © 2017 Sutherland et al.)
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- 2017
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216. Genetically based population divergence in overwintering energy mobilization in brook charr (Salvelinus fontinalis).
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Crespel A, Bernatchez L, Garant D, and Audet C
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- Adaptation, Physiological genetics, Animals, Chimera genetics, Ecosystem, Energy Metabolism genetics, Genotype, Lipid Metabolism genetics, Liver Glycogen metabolism, Population genetics, Trout metabolism, Genetic Variation, Seasons, Trout genetics
- Abstract
Investigating the nature of physiological traits potentially related to fitness is important towards a better understanding of how species and/or populations may respond to selective pressures imposed by contrasting environments. In northern species in particular, the ability to mobilize energy reserves to compensate for the low external energy intake during winter is crucial. However, the phenotypic and genetic bases of energy reserve accumulation and mobilization have rarely been investigated, especially pertaining to variation in strategy adopted by different populations. In the present study, we documented variation in several energy reserve variables and estimated their quantitative genetic basis to test the null hypothesis of no difference in variation at those traits among three strains of brook charr (Salvelinus fontinalis) and their reciprocal hybrids. Our results indicate that the strategy of winter energy preparation and mobilization was specific to each strain, whereby (1) domestic fish accumulated a higher amount of energy reserves before winter and kept accumulating liver glycogen during winter despite lower feeding; (2) Laval fish used liver glycogen and lipids during winter and experienced a significant decrease in condition factor; (3) Rupert fish had relatively little energy reserves accumulated at the end of fall and preferentially mobilized visceral fat during winter. Significant heritability for traits related to the accumulation and use of energy reserves was found in the domestic and Laval but not in the Rupert strain. Genetic and phenotypic correlations also varied among strains, which suggested population-specific genetic architecture underlying the expression of these traits. Hybrids showed limited evidence of non-additive effects. Overall, this study provides the first evidence of a genetically based-and likely adaptive-population-specific strategy for energy mobilization related to overwinter survival.
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- 2013
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217. Strain specific genotype-environment interactions and evolutionary potential for body mass in brook charr (Salvelinus fontinalis).
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Crespel A, Bernatchez L, Audet C, and Garant D
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- Animals, Crosses, Genetic, Genetic Variation, Genotype, Phenotype, Quantitative Trait, Heritable, Selection, Genetic, Species Specificity, Time Factors, Trout physiology, Biological Evolution, Body Weight genetics, Gene-Environment Interaction, Trout genetics
- Abstract
Discriminating between genetic and environmental causes of phenotypic variation is an essential requirement for understanding the evolutionary potential of populations. However, the extent to which genetic variation differs among conspecific groups and environments during ontogeny has rarely been investigated. In this study, the genetic basis of body mass was measured in three divergent strains of brook charr (Salvelinus fontinalis) in different rearing environments and at different time periods. The results indicate that body mass was a heritable trait in all strains but that the level of heritability greatly differed among strains. Moreover, heritability estimates of each strain varied differently according to environmental rearing conditions, and cross-environments correlations were all significantly lower than unity, indicating strain-specific patterns of genotype-environment interactions. Heritability estimates also varied throughout ontogeny and decreased by 50% from 9 to 21 months of age. This study highlights the divergence in genetic architecture and evolutionary potential among these strains and emphasizes the importance of considering the strain-specific potential of the response to selection according to environmental variation.
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- 2013
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218. Coding Gene SNP Mapping Reveals QTL Linked to Growth and Stress Response in Brook Charr (Salvelinus fontinalis).
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Sauvage C, Vagner M, Derôme N, Audet C, and Bernatchez L
- Abstract
Growth performance and reduced stress response are traits of major interest in fish production. Growth and stress-related quantitative trait loci (QTL) have been already identified in several salmonid species, but little effort has been devoted to charrs (genus Salvelinus). Moreover, most QTL studies to date focused on one or very few traits, and little investigation has been devoted to QTL identification for gene expression. Here, our objective was to identify QTL for 27 phenotypes related to growth and stress responses in brook charr (Salvelinus fontinalis), which is one of the most economically important freshwater aquaculture species in Canada. Phenotypes included 12 growth parameters, six blood and plasma variables, three hepatic variables, and one plasma hormone level as well as the relative expression measurements of five genes of interest linked to growth regulation. QTL analysis relied on a linkage map recently built from S. fontinalis consisting of both single-nucleotide polymorphism (SNP, n = 266) and microsatellite (n =81) markers in an F(2) interstrain hybrid population (n = 171). We identified 63 growth-related QTL and four stress-related QTL across 18 of the 40 linkage groups of the brook charr linkage map. Percent variance explained, confidence interval, and allelic QTL effects also were investigated to provide insight into the genetic architecture of growth- and stress-related QTL. QTL related to growth performance and stress response that were identified could be classified into two groups: (1) a group composed of the numerous, small-effect QTL associated with some traits related to growth (i.e., weight) that may be under the control of a large number of genes or pleiotropic genes, and (2) a group of less numerous QTL associated with growth (i.e., gene expression) and with stress-related QTL that display a larger effect, suggesting that these QTL are under the control of a limited number of genes of major effect. This study represents a first step toward the identification of genes potentially linked to phenotypic variation of growth and stress response in brook charr. The ultimate goal is to provide new tools for developing Molecular Assisted Selection for this species.
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- 2012
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219. Coding Gene Single Nucleotide Polymorphism Mapping and Quantitative Trait Loci Detection for Physiological Reproductive Traits in Brook Charr, Salvelinus fontinalis.
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Sauvage C, Vagner M, Derôme N, Audet C, and Bernatchez L
- Abstract
A linkage map of 40 linkage groups (LGs) was developed for brook charr, Salvelinus fontinalis, using an F(2) interstrain hybrid progeny (n = 171) and 256 coding gene SNP developed specifically for brook charr and validated from a large (>1000) subset of putative SNP, as well as 81 microsatellite markers. To identify quantitative trait loci (QTL) related to reproduction functions, these fish were also phenotyped at six physiological traits, including spermatozoid head diameter, sperm concentration, plasma testosterone, plasma 11-keto-testosterone, egg diameter, and plasma 17β-estradiol. Five significant QTL were detected over four LGs for egg diameter and plasma 17β-estradiol concentration in females, and sperm concentration as well as spermatozoid head diameter in males. In females, two different QTLs located on LG 11 and LG 34 were associated with the egg number, whereas one QTL was associated with plasma 17β-estradiol concentration (LG 8). Their total percent variance explained (PVE) was 26.7% and 27.6%, respectively. In males, two QTL were also detected for the sperm concentration, and their PVE were estimated at 18.58% and 14.95%, respectively. The low QTL number, associated with the high PVE, suggests that the variance in these reproductive physiological traits was either under the control of one major gene or a small number of genes. The QTL associated with sperm concentration, plasma 17β-estradiol, and egg diameter appeared to be under a dominance effect, whereas the two others were under a negative additive effect. These results show that genes underlying the phenotypic variance of these traits are under different modes of action (additive vs. dominance) and may be used to predict an increase or a decrease in their phenotypic values in subsequent generations of selective breeding. Moreover, this newly developed panel of mapped SNP located in coding gene regions will be useful for screening wild populations, especially in the context of investigating the genetic impact of massive stocking of domestic brook charr to support the angling industry throughout eastern North America.
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- 2012
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220. Regulation of the connexin 43 promoter in the brook trout testis: role of the thyroid hormones and cAMP.
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de Montgolfier B, Audet C, and Cyr DG
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- Animals, Male, Connexin 43 genetics, Cyclic AMP metabolism, Promoter Regions, Genetic genetics, Testis metabolism, Thyroid Hormones metabolism
- Abstract
Gap junctions are critical for spermatogenesis. They are composed of integral proteins, the connexins. In mammals, a loss of Cx43 expression results in the inhibition of spermatogenesis. We have shown that Cx43 is expressed in the Sertoli cells of rainbow trout and that cAMP and triiodothyronine (T(3)) regulate testicular Cx43 expression in brook trout testis. The objective of this study was to determine if cAMP and T(3) act at the level of the cx43 promoter to regulate its expression. A 607 bp 5' flanking sequence of the cx43 promoter was obtained by Genome Walking. A TATA box was predicted to be located between positions -36 and -30 relative to the transcriptional initiation site. 5'-Rapid amplification of cDNA ends indicated a single transcriptional start site. Single C/EBP (-164 to -156) and tr-beta (-112 to -107) response elements were identified and electrophoretic mobility shift assays indicated the presence of competitive protein binding sites at each region. Immortalized rainbow trout gonadal cell line (RTG-2) which express cx43 and tr-beta transcripts were transfected with a vector containing the Cx43 promoter inserted into a luciferase expression vector. Transactivation of the reporter genes was stimulated by either cAMP or T(3). Sequential deletion and point mutations in either the C/EBP or tr-beta response element indicated that T(3) but not cAMP directly induced luciferase transactivation of the luciferase gene by acting on different sites of the Cx43 promoter. Together, these data indicate that T(3) stimulates cx43 expression via direct regulation of gene transcription., (Copyright © 2010 Elsevier Inc. All rights reserved.)
- Published
- 2011
- Full Text
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221. The Effects of Two Rearing Salinities on Survival and Stress of Winter Flounder Broodstock.
- Author
-
Plante S, Audet C, Lambert Y, and de la Noüe J
- Abstract
The goal of this study was to determine rearing conditions that would improve the survival of broodstock of winter flounder Pleuronectes americanus. We hypothesized that keeping wild winter flounder in iso-osmotic water would reduce the energy costs related to osmoregulation; the resulting energy gain could then be used for growth or immune responses. Eighty fish were randomly separated into four tanks, two containing seawater (SW; 28.7 ± 0.9‰ (mean ± SD)) and two containing brackish water (BW; 14.7 ± 1.7‰). Fish were sampled after 2 and 5 months of captivity for evaluation of their condition and stress status. Between the second and fifth months, the condition index increased significantly in both salinity groups, whereas body water content decreased. No salinity effect in terms of growth, condition, or energy reserves was found. However, the fish in BW showed much lower mortality. We found that the fish in SW had higher levels of the physiological indicators of stress than those in BW, which could have increased the risk of opportunistic infections in the former. Also, thrombocytes were absent in the SW fish after 2 months of captivity, which may have contributed to some mortalities. The lower resistance of certain opportunistic pathogens to BW is another possible explanation as to why fish in BW had lower occurrences of infectious diseases.
- Published
- 2006
- Full Text
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