2,242 results on '"A De Groof"'
Search Results
2. Optimizing Multi-expert Consensus for Classification and Precise Localization of Barrett’s Neoplasia
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Kusters, Carolus H. J., Boers, Tim G. W., Jaspers, Tim J. M., Jong, Martijn R., van Eijck van Heslinga, Rixta A. H., de Groof, Albert J., Bergman, Jacques J., van der Sommen, Fons, De With, Peter H. N., Goos, Gerhard, Series Editor, Hartmanis, Juris, Founding Editor, Bertino, Elisa, Editorial Board Member, Gao, Wen, Editorial Board Member, Steffen, Bernhard, Editorial Board Member, Yung, Moti, Editorial Board Member, Ali, Sharib, editor, van der Sommen, Fons, editor, Papież, Bartłomiej Władysław, editor, Ghatwary, Noha, editor, Jin, Yueming, editor, and Kolenbrander, Iris, editor
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- 2025
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3. Molecular Characterization of Monocyte Subsets Reveals Specific and Distinctive Molecular Signatures Associated With Cardiovascular Disease in Rheumatoid Arthritis
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Patricia Ruiz-Limon, Rafaela Ortega-Castro, Nuria Barbarroja, Carlos Perez-Sanchez, Christophe Jamin, Alejandra Maria Patiño-Trives, Maria Luque-Tevar, Alejandro Ibáñez-Costa, Laura Perez-Sanchez, Iván Arias de la Rosa, MaCarmen Abalos-Aguilera, Yolanda Jimenez-Gomez, Jerusalem Calvo-Gutierrez, Pilar Font, Alejandro Escudero-Contreras, Marta E. Alarcon-Riquelme, Eduardo Collantes-Estevez, Chary López-Pedrera, the PRECISESADS Clinical Consortium and Flow Cytometry Study Group, C Marañón, L Le Lann, N Varela, B Muchmore, A Dufour, Alvarez, C Carlo Montserrat Chizzolini, E, NB De Langhe, CL-P, V Gerl, A De Groof, J Ducreux, E Trombetta, T Li, D Alvarez-Errico, S Rao, JO Pers, L Beretta, R AguilarQuesada, MA Aguirre-Zamorano, JL Callejas Rubio, MC Castro-Villegas, R Cervera, C Chizzolini, E Collantes, D Cornec, E De Langhe, V Devauchelle-Pensec, AE-C, G Espinosa, MC Fernández Roldán, T Gomes Anjos, F Hiepe, I Jiménez Moleón, S Jousse-Joulin, B Lauwerys, A López-Berrio, R Lories, J Marovac, PL Meroni, B Miranda, H Navarro-Linares, R Ortega-Castro, N Ortego, E Ramón Garrido, E Raya, R Ríos Fernández, I Rodríguez-Pintó, and A Saraux
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rheumatoid arthritis ,cardiovascular disease ,monocyte subsets ,microRNAs ,gene profile ,Immunologic diseases. Allergy ,RC581-607 - Abstract
Objectives: This study, developed within the Innovative Medicines Initiative Joint Undertaking project PRECISESADS framework, aimed at functionally characterize the monocyte subsets in RA patients, and analyze their involvement in the increased CV risk associated with RA.Methods: The frequencies of monocyte subpopulations in the peripheral blood of 140 RA patients and 145 healthy donors (HDs) included in the PRECISESADS study were determined by flow cytometry. A second cohort of 50 RA patients and 30 HDs was included, of which CD14+ and CD16+ monocyte subpopulations were isolated using immuno-magnetic selection. Their transcriptomic profiles (mRNA and microRNA), proinflammatory patterns and activated pathways were evaluated and related to clinical features and CV risk. Mechanistic in vitro analyses were further performed.Results: CD14++CD16+ intermediate monocytes were extended in both cohorts of RA patients. Their increased frequency was associated with the positivity for autoantibodies, disease duration, inflammation, endothelial dysfunction and the presence of atheroma plaques, as well as with the CV risk score. CD14+ and CD16+ monocyte subsets showed distinctive and specific mRNA and microRNA profiles, along with specific intracellular signaling activation, indicating different functionalities. Moreover, that specific molecular profiles were interrelated and associated to atherosclerosis development and increased CV risk in RA patients. In vitro, RA serum promoted differentiation of CD14+CD16− to CD14++CD16+ monocytes. Co-culture with RA-isolated monocyte subsets induced differential activation of endothelial cells.Conclusions: Our overall data suggest that the generation of inflammatory monocytes is associated to the autoimmune/inflammatory response that mediates RA. These monocyte subsets, -which display specific and distinctive molecular signatures- might promote endothelial dysfunction and in turn, the progression of atherosclerosis through a finely regulated process driving CVD development in RA.
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- 2019
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4. Nutritional intake and growth until two years of age in moderate and late preterms
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Lafeber, Anne H., de Jong, Roxanne C., Bosch, Mark, van de Lagemaat, Monique, van Veenendaal, Nicole R., Aarnoudse - Moens, Cornelieke S. H., Boersma, Bart, van Goudoever, Johannes B., and de Groof, Femke
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- 2024
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5. Incidence of contralateral metachronous inguinal hernia on long term follow-up after unilateral inguinal hernia repair: a systematic review and meta-analysis
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Vissers, Schila, De Groof, Pieter, Fieuws, Steffen, Abramovich, Tamar, Van De Winkel, Nele, and Miserez, Marc
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- 2024
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6. Slow Solar Wind Connection Science during Solar Orbiter's First Close Perihelion Passage
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Yardley, Stephanie L., Owen, Christopher J., Long, David M., Baker, Deborah, Brooks, David H., Polito, Vanessa, Green, Lucie M., Matthews, Sarah, Owens, Mathew, Lockwood, Mike, Stansby, David, James, Alexander W., Valori, Gherado, Giunta, Alessandra, Janvier, Miho, Ngampoopun, Nawin, Mihailescu, Teodora, To, Andy S. H., van Driel-Gesztelyi, Lidia, Demoulin, Pascal, D'Amicis, Raffaella, French, Ryan J., Suen, Gabriel H. H., Roulliard, Alexis P., Pinto, Rui F., Reville, Victor, Watson, Christopher J., Walsh, Andrew P., De Groof, Anik, Williams, David R., Zouganelis, Ioannis, Muller, Daniel, Berghmans, David, Auchere, Frederic, Harra, Louise, Scheuhle, Udo, Barczynski, Krysztof, Buchlin, Eric, Cuadrado, Regina Aznar, Kraaikamp, Emil, Mandal, Sudip, Parenti, Susanna, Peter, Hardi, Rodriguez, Luciano, Schwanitz, Conrad, Smith, Phil, Teriaca, Luca, Verbeeck, Cis, Zhukov, Andrei N., De Pontieu, Bart, Horbury, Tim, Solanki, Sami K., Iniesta, Jose Carlos del Toro, Woch, Joachim, Gandorfer, Achim, Hirzberger, Johann, Suarez, David Orozco, Appourchaux, Thierry, Calchetti, Daniele, Sinjan, Jonas, Kahil, Fatima, Albert, Kinga, Volkmer, Reiner, Carlsson, Mats, Fludra, Andrzej, Hassler, Don, Caldwell, Martin, Fredvik, Terje, Grundy, Tim, Guest, Steve, Haberreiter, Margit, Leeks, Sarah, Pelouze, Gabriel, Plowman, Joseph, Schmutz, Werner, Sidher, Sunil, Thompson, William T., Louarn, Philippe, and Federov, Andrei
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Astrophysics - Solar and Stellar Astrophysics ,Physics - Space Physics - Abstract
The Slow Solar Wind Connection Solar Orbiter Observing Plan (Slow Wind SOOP) was developed to utilise the extensive suite of remote sensing and in situ instruments on board the ESA/NASA Solar Orbiter mission to answer significant outstanding questions regarding the origin and formation of the slow solar wind. The Slow Wind SOOP was designed to link remote sensing and in situ measurements of slow wind originating at open-closed field boundaries. The SOOP ran just prior to Solar Orbiter's first close perihelion passage during two remote sensing windows (RSW1 and RSW2) between 2022 March 3-6 and 2022 March 17-22, while Solar Orbiter was at a heliocentric distance of 0.55-0.51 and 0.38-0.34 au from the Sun, respectively. Coordinated observation campaigns were also conducted by Hinode and IRIS. The magnetic connectivity tool was used, along with low latency in situ data, and full-disk remote sensing observations, to guide the target pointing of Solar Orbiter. Solar Orbiter targeted an active region complex during RSW1, the boundary of a coronal hole, and the periphery of a decayed active region during RSW2. Post-observation analysis using the magnetic connectivity tool along with in situ measurements from MAG and SWA/PAS, show that slow solar wind, with velocities between 210 and 600 km/s, arrived at the spacecraft originating from two out of the three of the target regions. The Slow Wind SOOP, despite presenting many challenges, was very successful, providing a blueprint for planning future observation campaigns that rely on the magnetic connectivity of Solar Orbiter., Comment: 24 pages, 10 figures
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- 2023
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7. Computer-aided diagnosis improves characterization of Barrett’s neoplasia by general endoscopists (with video)
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Alkhalaf, Alaa, Herrero, Lorenza Alvarez, Baldaque-Silva, Francisco, Barret, Maximilien, Bergman, Jacques J., Beyna, Torsten, Bisschops, Raf, Boers, Tim G., Curvers, Wouter, Deprez, Pierre H., Duits, Lucas C., Elbe, Peter, Esteban, Jose Miguel, Falk, Gary W., Fockens, Kiki N., Ginsberg, Gregory G., de Groof, Albert J., Haidry, Rehan, Houben, Martin H., Infantolino, Anthony, Iyer, Prasad G., Jong, Martijn, Jonge, Pieter-Jan de, Jukema, Jelmer B., Koch, Arjun, Komanduri, Srinadh, Konda, Vani, Kusters, Koen C., Leclerq, Philippe, Leggett, Cadman L., Lightdale, Charles J., Mallant-Hent, Rosalie C., Villarejo, Guiomar Moral, Fernández-Sordo, Jacobo Ortiz, Pech, Oliver, Penman, Ian, Pouw, Roos E., van der Putten, Joost A., Ragunath, Krish, Scholten, Pieter, Seewald, Stefan, Sethi, Amritha, Smith, Michael S., van der Sommen, Fons, Trindade, Arvind, Wani, Sachin, Waxman, Irving, Westerhof, Jessie, Weusten, Bas L., de With, Peter H., Wolfsen, Herbert C., Kusters, Carolus H.J., Jong, Martijn R., Boers, Tim, Weusten, Bas L.A.M., Houben, Martin H.M.G., Nagengast, Wouter B., Mallant-Hent, Rosalie, Silva, Francisco Baldaque, Ortiz Fernández-Sordo, Jacobo, Moral Villarejo, Guiomar, Montazeri, Nahid S.M., der Sommen, Fons van, and de Groof, A. Jeroen
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- 2024
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8. The use of a real-time computer-aided detection system for visible lesions in the Barrett’s esophagus during live endoscopic procedures: a pilot study (with video)
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Alkhalaf, Alaa, Herrero, Lorenza Alvarez, Baldaque-Silva, Francisco, Barret, Maximilien, Bergman, Jacques J., Beyna, Torsten, Boers, Tim G., Elbe, Peter, Fockens, Kiki N., de Groof, Albert J., Houben, Martin H., Jong, Martijn, Jukema, Jelmer B., Kusters, Koen C., Mallant-Hent, Rosalie C., Villarejo, Guiomar Moral, Nagengast, Wouter, Fernández-Sordo, Jacobo Ortiz, Pech, Oliver, Pouw, Roos E., van der Putten, Joost A., Ragunath, Krish, Scholten, Pieter, Seewald, Stefan, der Sommen, Fons van, Westerhof, Jessie, Weusten, Bas L., de With, Peter H., Jong, Martijn R., Boers, Tim, Kusters, Carolus H.J., Duits, Lucas C., van der Sommen, Fons, and de Groof, A. Jeroen
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- 2024
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9. The SWAP Filter: A Simple Azimuthally Varying Radial Filter for Wide-Field EUV Solar Images
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Seaton, Daniel B., Berghmans, David, Bloomfield, D. Shaun, De Groof, Anik, D'Huys, Elke, Nicula, Bogdan, Rachmeler, Laurel A., and West, Matthew J.
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Astrophysics - Solar and Stellar Astrophysics ,Astrophysics - Instrumentation and Methods for Astrophysics - Abstract
We present the SWAP Filter: an azimuthally varying, radial normalizing filter specifically developed for EUV images of the solar corona, named for the Sun Watcher with Active Pixels and Image Processing (SWAP) instrument on the Project for On-Board Autonomy 2 spacecraft. We discuss the origins of our technique, its implementation and key user-configurable parameters, and highlight its effects on data via a series of examples. We discuss the filter's strengths in a data environment in which wide field-of-view observations that specifically target the low signal-to-noise middle corona are newly available and expected to grow in the coming years., Comment: Contact D. B. Seaton for animations referenced in figure captions
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- 2023
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10. Incidence and risk factors of metachronous contralateral inguinal hernia development up to 25 years after unilateral inguinal hernia repair: a single-centre retrospective cohort study
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Glorieux, Robin, Van Aerde, Matthias, Vissers, Schila, Fieuws, Steffen, De Groof, Pieter, and Miserez, Marc
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- 2024
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11. CNNs vs. Transformers: Performance and Robustness in Endoscopic Image Analysis
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Kusters, Carolus H. J., Boers, Tim G. W., Jaspers, Tim J. M., Jukema, Jelmer B., Jong, Martijn R., Fockens, Kiki N., de Groof, Albert J., Bergman, Jacques J., van der Sommen, Fons, de With, Peter H. N., Goos, Gerhard, Founding Editor, Hartmanis, Juris, Founding Editor, Bertino, Elisa, Editorial Board Member, Gao, Wen, Editorial Board Member, Steffen, Bernhard, Editorial Board Member, Yung, Moti, Editorial Board Member, Wu, Shandong, editor, Shabestari, Behrouz, editor, and Xing, Lei, editor
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- 2024
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12. Investigating the Impact of Image Quality on Endoscopic AI Model Performance
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Jaspers, Tim J. M., Boers, Tim G. W., Kusters, Carolus H. J., Jong, Martijn R., Jukema, Jelmer B., de Groof, Albert J., Bergman, Jacques J., de With, Peter H. N., van der Sommen, Fons, Goos, Gerhard, Founding Editor, Hartmanis, Juris, Founding Editor, Bertino, Elisa, Editorial Board Member, Gao, Wen, Editorial Board Member, Steffen, Bernhard, Editorial Board Member, Yung, Moti, Editorial Board Member, Wu, Shandong, editor, Shabestari, Behrouz, editor, and Xing, Lei, editor
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- 2024
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13. The role of artificial intelligence in Barrett's esophagus: Current status and future challenges
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van Eijck van Heslinga, R.A.H., Bergman, J.J.G.H.M., and de Groof, A.J.
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- 2025
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14. Will Transformers change gastrointestinal endoscopic image analysis? A comparative analysis between CNNs and Transformers, in terms of performance, robustness and generalization
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Kusters, Carolus H.J., Jaspers, Tim J.M., Boers, Tim G.W., Jong, Martijn R., Jukema, Jelmer B., Fockens, Kiki N., de Groof, Albert J., Bergman, Jacques J., van der Sommen, Fons, and De With, Peter H.N.
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- 2025
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15. Foundation models in gastrointestinal endoscopic AI: Impact of architecture, pre-training approach and data efficiency
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Boers, Tim G.W., Fockens, Kiki N., van der Putten, Joost A., Jaspers, Tim J.M., Kusters, Carolus H.J., Jukema, Jelmer B., Jong, Martijn R., Struyvenberg, Maarten R., de Groof, Jeroen, Bergman, Jacques J., de With, Peter H.N., and van der Sommen, Fons
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- 2024
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16. A deep learning system for detection of early Barrett's neoplasia: a model development and validation study
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Alkhalaf, Alaa, Alvarez Herrero, Lorenza, Baldaque-Silva, Francisco, Barret, Maximilien, Bergman, Jacques J, Beyna, Torsten, Bisschops, Raf, Boers, Tim G, Curvers, Wouter, Deprez, Pierre H, Duits, Lucas C, Elbe, Peter, Esteban, Jose M, Falk, Gary W, Fockens, Kiki N, Ganguly, Eric, Ginsberg, Gregory G, de Groof, Albert J, Haidry, Rehan, Houben, Martin H, Infantolino, Anthony, Iyer, Prasad G, Jong, Martijn R, De Jonge, Pieter-Jan, Jukema, Jelmer B, Koch, Arjun K, Komanduri, Srinadh, Konda, Vani, Kusters, Carolus H J, Leclercq, Philippe, Leggett, Cadman L, Lemmers, Arnaud, Lightdale, Charles J, Mallant-Hent, Rosalie C, Moral Villarejo, Guiomar, Muthusamy, V Raman, Nagengast, Wouter, Ortiz Fernández-Sordo, Jacobo, Pech, Oliver, Penman, Ian, Pleskow, Douglas K, Pouw, Roos E, van der Putten, Joost A, Ragunath, Krish, Scholten, Pieter, Seewald, Stefan, Sethi, Amritha, Smith, Michael S, Van der Sommen, Fons, Trindade, Arvind, Wani, Sachin, Waxman, Irving, Westerhof, Jessie, Weusten, Bas L, de With, Peter H N, Wolfsen, Herbert C, Fockens, K N, Jong, M R, Jukema, J B, Boers, T G W, Kusters, C H J, van der Putten, J A, Pouw, R E, Duits, L C, Montazeri, N S M, van Munster, S N, Weusten, B L A M, Alvarez Herrero, L, Houben, M H M G, Nagengast, W B, Westerhof, J, Alkhalaf, A, Mallant-Hent, R C, Scholten, P, Ragunath, K, Seewald, S, Elbe, P, Baldaque-Silva, F, Barret, M, Ortiz Fernández-Sordo, J, Villarejo, G Moral, Pech, O, Beyna, T, van der Sommen, F, de With, P H, de Groof, A J, and Bergman, J J
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- 2023
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17. Generation and Characterization of Novel Pan‐Cancer Anti‐uPAR Fluorescent Nanobodies as Tools for Image‐Guided Surgery
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Łukasz Mateusiak, Sam Floru, Timo W. M. De Groof, Janne Wouters, Noemi B. Declerck, Pieterjan Debie, Simone Janssen, Katty Zeven, Janik Puttemans, Cécile Vincke, Karine Breckpot, Nick Devoogdt, and Sophie Hernot
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fluorescence molecular imaging ,fluorescence‐guided surgery ,single‐domain antibodies ,urokinase plasminogen activator receptor ,Science - Abstract
Abstract Fluorescence molecular imaging plays a vital role in image‐guided surgery. In this context, the urokinase plasminogen activator receptor (uPAR) is an interesting biomarker enabling the detection and delineation of various tumor types due to its elevated expression on both tumor cells and the tumor microenvironment. In this study, anti‐uPAR Nanobodies (Nbs) are generated through llama immunization with human and murine uPAR protein. Extensive in vitro characterization and in vivo testing with radiolabeled variants are conducted to assess their pharmacokinetics and select lead compounds. Subsequently, the selected Nbs are converted into fluorescent agents, and their application for fluorescence‐guided surgery is evaluated in various subcutaneous and orthotopic tumor models. The study yields a panel of high‐affinity anti‐uPAR Nbs, showing specific binding across multiple types of cancer cells in vitro and in vivo. Lead fluorescently‐labeled compounds exhibit high tumor uptake with high contrast at 1 h after intravenous injection across all assessed uPAR‐expressing tumor models, outperforming a non‐targeting control Nb. Additionally, rapid and accurate tumor localization and demarcation are demonstrated in an orthotopic human glioma model. Utilizing these Nbs can potentially enhance the precision of surgical tumor resection and, consequently, improve survival rates in the clinic.
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- 2024
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18. Advancement of artificial intelligence systems for surveillance endoscopy of Barrett's esophagus
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Jong, M.R. and de Groof, A.J.
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- 2024
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19. Prognostic significance of MRI-detected extramural venous invasion according to grade and response to neo-adjuvant treatment in locally advanced rectal cancer A national cohort study after radiologic training and reassessment
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Aalbers, Arend G.J., van Aalten, Susanna M., Amelung, Femke J., Ankersmit, Marjolein, Antonisse, Imogeen E., Ashruf, Jesse F., Aukema, Tjeerd S., Avenarius, Henk, Bahadoer, Renu R., Bakers, Frans C.H., Bakker, Ilsalien S., Bangert, Fleur, Barendse, Renée M., Beekhuis, Heleen M.D., Beets, Geerard L., Bemelman, Willem A., Berbée, Maaike, de Bie, Shira H., Bisschops, Robert H.C., Blok, Robin D., van Bockel, Liselotte W., Boer, Anniek H., den Boer, Frank C., Boerma, Evert-Jan G., Boogerd, Leonora S.F., Borstlap, Jaap, Borstlap, Wernard A.A., Bouwman, Johanna E., Braak, Sicco J., Braat, Manon N.G.J.A., Bradshaw, Jennifer, Brandsma, Amarins T.A., van Breest Smallenburg, Vivian, van den Broek, Wim T., van der Burg, Sjirk W., Burger, Jacobus W.A., Burghgraef, Thijs A., ten Cate, David W.G., Ceha, Heleen M., Cnossen, Jeltsje S., Coebergh van den Braak, Robert R.J., Consten, Esther C.J., Corver, Maaike, Crolla, Rogier M.P.H., Curutchet, Sam, Daniëls-Gooszen, Alette W., Davids, Paul H.P., Dekker, Emmelie N., Dekker, Jan Willem T., Demirkiran, Ahmet, Derksen, Tyche, Diederik, Arjen L., Dinaux, Anne M., Dogan, Kemal, van Dop, Ilse M., Droogh-de Greve, Kitty E., Duijsens, Hanneke M.H., Dunker, Michalda S., Duyck, Johan, van Duyn, Eino B., van Egdom, Laurentine S.E., Eijlers, Bram, El-Massoudi, Youssef, van Elderen, Saskia, Emmen, Anouk M.L.H., Engelbrecht, Marc, van Erp, Anne C., van Essen, Jeroen A., Fabry, Hans F.J., Fassaert, Thomas, Feitsma, Eline A., Feshtali, Shirin S., Frietman, Bas, Furnée, Edgar J.B., van Geel, Anne M., Geijsen, Elisabeth D., van Geloven, Anna A.W., Gerhards, Michael F., Gielkens, Hugo, van Gils, Renza A.H., Goense, Lucas, Govaert, Marc J.P.M., van Grevenstein, Wilhelmina M.U., Joline de Groof, E., de Groot, Irene, de Haas, Robbert J., Hakkenbrak, Nadia A.G., den Hartogh, Mariska D., Heesink, Vera, Heikens, Joost T., Hendriksen, Ellen M., van den Hoek, Sjoerd, van der Hoeven, Erik J.R.J., Hoff, Christiaan, Hogewoning, Anna, Hogewoning, Cornelis R.C., Hoogendoorn, Stefan, van Hoorn, Francois, van der Hul, René L., van Hulst, Rieke, Imani, Farshad, Inberg, Bas, Intven, Martijn P.W., Janssen, Pedro, de Jong, Chris E.J., Jonkers, Jacoline, Jou-Valencia, Daniela, Keizers, Bas, Ketelaers, Stijn H.J., Knöps, Eva, van Koeverden, Sebastiaan, Kok, Sylvia, Kolderman, Stephanie E.M., de Korte, Fleur I., Kortekaas, Robert T.J., Korving, Julie C., Koster, Ingrid M., Krdzalic, Jasenko, Krielen, Pepijn, Kroese, Leonard F., Krul, Eveline J.T., Lahuis, Derk H.H., Lamme, Bas, van Landeghem, An A.G., Leijtens, Jeroen W.A., Leseman-Hoogenboom, Mathilde M., de Lijster, Manou S., Marsman, Martijn S., Martens, MilouH., Masselink, Ilse, van der Meij, Wout, Meijnen, Philip, Melenhorst, Jarno, de Mey, Dietrich J.L., Moelker-Galuzina, Julia, Morsink, Linda, Mulder, Erik J., Muller, Karin, Musters, Gijsbert D., Neijenhuis, Peter A., de Nes, Lindsey C.F., Nielen, M., van den Nieuwboer, Jan B.J., Nieuwenhuis, Jonanne F., Nonner, Joost, Noordman, Bo J., Nordkamp, Stefi, Olthof, Pim B., Oosterling, Steven J., Ootes, Daan, Oppedijk, Vera, Ott, Pieter, Paulusma, Ida, Peeters, Koen C.M.J., Pereboom, Ilona T.A., Peringa, Jan, Pironet, Zoë, Plate, Joost D.J., Polat, Fatih, Poodt, Ingrid G.M., Posma, Lisanne A.E., Prette, Jeroen F., Pultrum, Bareld B., Qaderi, Seyed M., van Rees, Jan M., Renger, Rutger-Jan, Rombouts, Anouk J.M., Roosen, Lodewijk J., Roskott-ten Brinke, Ellen A., Rothbarth, Joost, Rouw, Dennis B., Rozema, Tom, Rütten, Heidi, Rutten, Harm J.T., van der Sande, Marit E., Schaafsma, Boudewijn E., Schasfoort, Renske A., Scheurkogel, Merel M., Schouten van der Velden, Arjan P., Schreurs, Wilhelmina H., Schuivens, Puck M.E., Sietses, Colin, Simons, Petra C.G., Slob, Marjan J., Slooter, Gerrit D., van der Sluis, Martsje, Smalbroek, Bo P., Smits, Anke B., Spillenaar-Bilgen, Ernst J., Spruit, Patty H., Stam, Tanja C., Stoker, Jaap, Talsma, Aaldert K., Temmink, Sofieke J.D., The, G.Y. Mireille, Tielbeek, Jeroen A.W., van Tilborg, Aukje A.J.M., van Tilborg, Fiek, van Trier, Dorothée, Tuynman, Jurriaan B., van der Valk, Maxime J.M., Vanhooymissen, Inge J.S., Vasbinder, G. Boudewijn C., Veeken, Cornelis J., Velema, Laura A., van de Ven, Anthony W.H., Verdaasdonk, Emiel G.G., Verduin, Wouter M., Verhagen, Tim, Verheijen, Paul M., Vermaas, Maarten, Verrijssen, An-Sofie E., Verschuur, Anna V.D., Schaik, Harmke Verwoerd-van, Vliegen, Roy F.A., Voets, Sophie, Vogelaar, F. Jeroen, Vogelij, Clementine L.A., Vos-Westerman, Johanna, de Vries, Marianne, Vroemen, Joy C., van Vugt, Bas S.T., Wegdam, Johannes A., van Wely, Bob J., Westerterp, Marinke, van Westerveld, Paul P., van Westreenen, Henderik L., Wijma, Allard G., de Wilt, Johannes H.W., de Wit, Bart W.K., Wit, Fennie, Woensdregt, Karlijn, van Woerden, Victor, van der Wolf, Floor S.W., van der Wolk, Sander, Wybenga, Johannes M., van der Zaag, Edwin S., Zamaray, Bobby, Zandvoort, Herman J.A., van der Zee, Dennis, Zeilstra, Annette P., Zheng, Kang J., Zimmerman, David D.E., Zorgdrager, Marcel, Geffen, Eline G.M. van, Nederend, Joost, Sluckin, Tania C., Hazen, Sanne-Marije J.A., Horsthuis, Karin, Beets-Tan, Regina G.H., Marijnen, Corrie A.M., Tanis, Pieter J., and Kusters, Miranda
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- 2024
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20. Christianity and Education Law
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Glenn, Charles L., De Groof, Jan, Witte, John, book editor, and Domingo, Rafael, book editor
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- 2024
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21. Ready? Steady? Grow! Readiness for Participating in Learning in Dual Education
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De Groof, Jetje, Daniëls, Ellen, Gijbels, David, Kyndt, Eva, Wille, Bart, and Van den Bossche, Piet
- Abstract
Pupils' and students' learning in the workplace and dual education has drawn increased attention because it is, among others, relevant in combating youth unemployment, increasing individual employability, and organisations' ability to provide high quality services and products. However, research focusing on pupils' and students' readiness to participate in learning in the workplace is scarce and scattered. The present study was conducted to get a deeper insight into readiness to participate in learning in the workplace, and more particular in the Flemish (Belgium) context of dual education. The study applied a multi-method approach including literature review, document study, semi-structured interviews and member checking. The study resulted in a conceptualisation of 'willingness to participate in learning in the workplace' and 'maturity for learning in the workplace' including clusters of competencies related to participation in the workplace, learning in the workplace, and motivation for learning and participating in the workplace. This conceptualisation contributes to the development of policy and practice through providing a basis for assessing readiness to participate in dual education.
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- 2022
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22. Robustness evaluation of deep neural networks for endoscopic image analysis: Insights and strategies
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Jaspers, Tim J.M., Boers, Tim G.W., Kusters, Carolus H.J., Jong, Martijn R., Jukema, Jelmer B., de Groof, Albert J., Bergman, Jacques J., de With, Peter H.N., and van der Sommen, Fons
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- 2024
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23. Nanobody-based pannexin1 channel inhibitors reduce inflammation in acute liver injury
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Raf Van Campenhout, Timo W. M. De Groof, Prashant Kadam, Brenda R. Kwak, Serge Muyldermans, Nick Devoogdt, and Mathieu Vinken
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Acute liver disease ,Inflammation ,Nanobody ,Pannexin1 ,Therapy ,Biotechnology ,TP248.13-248.65 ,Medical technology ,R855-855.5 - Abstract
Abstract Background The opening of pannexin1 channels is considered as a key event in inflammation. Pannexin1 channel-mediated release of adenosine triphosphate triggers inflammasome signaling and activation of immune cells. By doing so, pannexin1 channels play an important role in several inflammatory diseases. Although pannexin1 channel inhibition could represent a novel clinical strategy for treatment of inflammatory disorders, therapeutic pannexin1 channel targeting is impeded by the lack of specific, potent and/or in vivo-applicable inhibitors. The goal of this study is to generate nanobody-based inhibitors of pannexin1 channels. Results Pannexin1-targeting nanobodies were developed as potential new pannexin1 channel inhibitors. We identified 3 cross-reactive nanobodies that showed affinity for both murine and human pannexin1 proteins. Flow cytometry experiments revealed binding capacities in the nanomolar range. Moreover, the pannexin1-targeting nanobodies were found to block pannexin1 channel-mediated release of adenosine triphosphate. The pannexin1-targeting nanobodies were also demonstrated to display anti-inflammatory effects in vitro through reduction of interleukin 1 beta amounts. This anti-inflammatory outcome was reproduced in vivo using a human-relevant mouse model of acute liver disease relying on acetaminophen overdosing. More specifically, the pannexin1-targeting nanobodies lowered serum levels of inflammatory cytokines and diminished liver damage. These effects were linked with alteration of the expression of several NLRP3 inflammasome components. Conclusions This study introduced for the first time specific, potent and in vivo-applicable nanobody-based inhibitors of pannexin1 channels. As demonstrated for the case of liver disease, the pannexin1-targeting nanobodies hold great promise as anti-inflammatory agents, yet this should be further tested for extrahepatic inflammatory disorders. Moreover, the pannexin1-targeting nanobodies represent novel tools for fundamental research regarding the role of pannexin1 channels in pathological and physiological processes. Graphical Abstract
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- 2023
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24. Investigating the Impact of Image Quality on Endoscopic AI Model Performance
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Jaspers, Tim J. M., primary, Boers, Tim G. W., additional, Kusters, Carolus H. J., additional, Jong, Martijn R., additional, Jukema, Jelmer B., additional, de Groof, Albert J., additional, Bergman, Jacques J., additional, de With, Peter H. N., additional, and van der Sommen, Fons, additional
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- 2023
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25. CNNs vs. Transformers: Performance and Robustness in Endoscopic Image Analysis
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Kusters, Carolus H. J., primary, Boers, Tim G. W., additional, Jaspers, Tim J. M., additional, Jukema, Jelmer B., additional, Jong, Martijn R., additional, Fockens, Kiki N., additional, de Groof, Albert J., additional, Bergman, Jacques J., additional, van der Sommen, Fons, additional, and de With, Peter H. N., additional
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- 2023
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26. Scrutiny of chimeric antigen receptor activation by the extracellular domain: experience with single domain antibodies targeting multiple myeloma cells highlights the need for case-by-case optimization
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Heleen Hanssens, Fien Meeus, Yannick De Vlaeminck, Quentin Lecocq, Janik Puttemans, Pieterjan Debie, Timo W. M. De Groof, Cleo Goyvaerts, Kim De Veirman, Karine Breckpot, and Nick Devoogdt
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CAR-T cells ,VHH ,multiple myeloma ,adoptive cell transfer ,hematology ,Immunologic diseases. Allergy ,RC581-607 - Abstract
IntroductionMultiple myeloma (MM) remains incurable, despite the advent of chimeric antigen receptor (CAR)-T cell therapy. This unfulfilled potential can be attributed to two untackled issues: the lack of suitable CAR targets and formats. In relation to the former, the target should be highly expressed and reluctant to shedding; two characteristics that are attributed to the CS1-antigen. Furthermore, conventional CARs rely on scFvs for antigen recognition, yet this withholds disadvantages, mainly caused by the intrinsic instability of this format. VHHs have been proposed as valid scFv alternatives. We therefore intended to develop VHH-based CAR-T cells, targeting CS1, and to identify VHHs that induce optimal CAR-T cell activation together with the VHH parameters required to achieve this.MethodsCS1-specific VHHs were generated, identified and fully characterized, in vitro and in vivo. Next, they were incorporated into second-generation CARs that only differ in their antigen-binding moiety. Reporter T-cell lines were lentivirally transduced with the different VHH-CARs and CAR-T cell activation kinetics were evaluated side-by-side. Affinity, cell-binding capacity, epitope location, in vivo behavior, binding distance, and orientation of the CAR-T:MM cell interaction pair were investigated as predictive parameters for CAR-T cell activation.ResultsOur data show that the VHHs affinity for its target antigen is relatively predictive for its in vivo tumor-tracing capacity, as tumor uptake generally decreased with decreasing affinity in an in vivo model of MM. This does not hold true for their CAR-T cell activation potential, as some intermediate affinity-binding VHHs proved surprisingly potent, while some higher affinity VHHs failed to induce equal levels of T-cell activation. This could not be attributed to cell-binding capacity, in vivo VHH behavior, epitope location, cell-to-cell distance or binding orientation. Hence, none of the investigated parameters proved to have significant predictive value for the extent of CAR-T cell activation.ConclusionsWe gained insight into the predictive parameters of VHHs in the CAR-context using a VHH library against CS1, a highly relevant MM antigen. As none of the studied VHH parameters had predictive value, defining VHHs for optimal CAR-T cell activation remains bound to serendipity. These findings highlight the importance of screening multiple candidates.
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- 2024
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27. The Solar Orbiter Science Activity Plan: translating solar and heliospheric physics questions into action
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Zouganelis, I., De Groof, A., Walsh, A. P., Williams, D. R., Mueller, D., Cyr, O. C. St, Auchere, F., Berghmans, D., Fludra, A., Horbury, T. S., Howard, R. A., Krucker, S., Maksimovic, M., Owen, C. J., Rodriiguez-Pacheco, J., Romoli, M., Solanki, S. K., Watson, C., Sanchez, L., Lefort, J., Osuna, P., Gilbert, H. R., Nieves-Chinchilla, T., Abbo, L., Alexandrova, O., Anastasiadis, A., Andretta, V., Antonucci, E., Appourchaux, T., Aran, A., Arge, C. N., Aulanier, G., Baker, D., Bale, S. D., Battaglia, M., Rubio, L. Bellot, Bemporad, A., Berthomier, M., Bocchialini, K., Bonnin, X., Brun, A. S., Bruno, R., Buchlin, E., Buechner, J., Bucik, R., Carcaboso, F., Carr, R., Carrasco-Blazquez, I., Cecconi, B., Cangas, I. Cernuda, Chen, C. H. K., Chitta, L. P., Chust, T., Dalmasse, K., D'Amicis, R., Da Deppo, V., De Marco, R., Dolei, S., Dolla, L., de Wit, T. Dudok, van Driel-Gesztelyi, L., Eastwood, J. P., Lara, F. Espinosa, Etesi, L., Fedorov, A., Felix-Redondo, F., Fineschi, S., Fleck, B., Fontaine, D., Fox, N. J., Gandorfer, A., Genot, V., Georgoulis, M. K., Gissot, S., Giunta, A., Gizon, L., Gomez-Herrero, R., Gontikakis, C., Graham, G., Green, L., Grundy, T., Haberreiter, M., Harra, L. K., Hassler, D. M., Hirzberger, J., Ho, G. C., Hurford, G., Innes, D., Issautier, K., James, A. W., Janitzek, N., Janvier, M., Jeffrey, N., Jenkins, J., Khotyaintsev, Y., Klein, K. -L., Kontar, E. P., Kontogiannis, I., Krafft, C., Krasnoselskikh, V., Kretzschmar, M., Labrosse, N., Lagg, A., Landini, F., Lavraud, B., Leon, I., Lepri, S. T., Lewis, G. R., Liewer, P., Linker, J., Livi, S., Long, D. M., Louarn, P., Malandraki, O., Maloney, S., Martinez-Pillet, V., Martinovic, M., Masson, A., Matthews, S., Matteini, L., Meyer-Vernet, N., Moraitis, K., Morton, R. J., Musset, S., Nicolaou, G., Nindos, A., O'Brien, H., Suarez, D. Orozco, Owens, M., Pancrazzi, M., Papaioannou, A., Parenti, S., Pariat, E., Patsourakos, S., Perrone, D., Peter, H., Pinto, R. F., Plainaki, C., Plettemeier, D., Plunkett, S. P., Raines, J. M., Raouafi, N., Reid, H., Retino, A., Rezeau, L., Rochus, P., Rodriguez, L., Rodriguez-Garcia, L., Roth, M., Rouillard, A. P., Sahraoui, F., Sasso, C., Schou, J., Schuehle, U., Sorriso-Valvo, L., Soucek, J., Spadaro, D., Stangalini, M., Stansby, D., Steller, M., Strugarek, A., Stverak, S., Susino, R., Telloni, D., Terasa, C., Teriaca, L., Toledo-Redondo, S., Iniesta, J. C. del Toro, Tsiropoula, G., Tsounis, A., Tziotziou, K., Valentini, F., Vaivads, A., Vecchio, A., Velli, M., Verbeeck, C., Verdini, A., Verscharen, D., Vilmer, N., Vourlidas, A., Wicks, R., Wimmer-Schweingruber, R. F., Wiegelmann, T., Young, P. R., and Zhukov, A. N.
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Astrophysics - Solar and Stellar Astrophysics ,Astrophysics - Instrumentation and Methods for Astrophysics - Abstract
Solar Orbiter is the first space mission observing the solar plasma both in situ and remotely, from a close distance, in and out of the ecliptic. The ultimate goal is to understand how the Sun produces and controls the heliosphere, filling the Solar System and driving the planetary environments. With six remote-sensing and four in-situ instrument suites, the coordination and planning of the operations are essential to address the following four top-level science questions: (1) What drives the solar wind and where does the coronal magnetic field originate? (2) How do solar transients drive heliospheric variability? (3) How do solar eruptions produce energetic particle radiation that fills the heliosphere? (4) How does the solar dynamo work and drive connections between the Sun and the heliosphere? Maximising the mission's science return requires considering the characteristics of each orbit, including the relative position of the spacecraft to Earth (affecting downlink rates), trajectory events (such as gravitational assist manoeuvres), and the phase of the solar activity cycle. Furthermore, since each orbit's science telemetry will be downloaded over the course of the following orbit, science operations must be planned at mission level, rather than at the level of individual orbits. It is important to explore the way in which those science questions are translated into an actual plan of observations that fits into the mission, thus ensuring that no opportunities are missed. First, the overarching goals are broken down into specific, answerable questions along with the required observations and the so-called Science Activity Plan (SAP) is developed to achieve this. The SAP groups objectives that require similar observations into Solar Orbiter Observing Plans (SOOPs), resulting in a strategic, top-level view of the optimal opportunities for science observations during the mission lifetime., Comment: 20 pages, 1 figure, accepted by Astronomy & Astrophysics
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- 2020
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28. The Solar Orbiter mission -- Science overview
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Müller, D., Cyr, O. C. St., Zouganelis, I., Gilbert, H. R., Marsden, R., Nieves-Chinchilla, T., Antonucci, E., Auchère, F., Berghmans, D., Horbury, T., Howard, R. A., Krucker, S., Maksimovic, M., Owen, C. J., Rochus, P., Rodriguez-Pacheco, J., Romoli, M., Solanki, S. K., Bruno, R., Carlsson, M., Fludra, A., Harra, L., Hassler, D. M., Livi, S., Louarn, P., Peter, H., Schühle, U., Teriaca, L., Iniesta, J. C. del Toro, Wimmer-Schweingruber, R. F., Marsch, E., Velli, M., De Groof, A., Walsh, A., and Williams, D.
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Astrophysics - Solar and Stellar Astrophysics ,Astrophysics - Instrumentation and Methods for Astrophysics - Abstract
Solar Orbiter, the first mission of ESA's Cosmic Vision 2015-2025 programme and a mission of international collaboration between ESA and NASA, will explore the Sun and heliosphere from close up and out of the ecliptic plane. It was launched on 10 February 2020 04:03 UTC from Cape Canaveral and aims to address key questions of solar and heliospheric physics pertaining to how the Sun creates and controls the Heliosphere, and why solar activity changes with time. To answer these, the mission carries six remote-sensing instruments to observe the Sun and the solar corona, and four in-situ instruments to measure the solar wind, energetic particles, and electromagnetic fields. In this paper, we describe the science objectives of the mission, and how these will be addressed by the joint observations of the instruments onboard. The paper first summarises the mission-level science objectives, followed by an overview of the spacecraft and payload. We report the observables and performance figures of each instrument, as well as the trajectory design. This is followed by a summary of the science operations concept. The paper concludes with a more detailed description of the science objectives. Solar Orbiter will combine in-situ measurements in the heliosphere with high-resolution remote-sensing observations of the Sun to address fundamental questions of solar and heliospheric physics. The performance of the Solar Orbiter payload meets the requirements derived from the mission's science objectives. Its science return will be augmented further by coordinated observations with other space missions and ground-based observatories., Comment: 32 pages, 30 figures; accepted for publication in A&A
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- 2020
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29. Anaerobic mixed culture processes for bio-waste valorisation
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De Groof, Vicky, Lanham, Ana, Arnot, Thomas, Leak, David, and Coma Bech, Marta
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Anaerobic mixed culture processes have great potential for bio-waste valorisation, as they convert organic matter to a range of value-added compounds. Of particular interest is acidogenic fermentation that accumulates the natural intermediates of anaerobic digestion, an already established technology. Delivering product selectivity is a challenge with complex feedstock, especially when aiming for cost-effective waste management by minimising chemical addition and operational complexity. This thesis explores operating strategies to direct fermentation of food waste towards medium chain carboxylic acids (MCCA) in single-stage stirred tank reactors. MCCA are generated via microbial chain elongation and have a higher value than other fermentation products. The substrates for chain elongation, i.e., volatile fatty acids and lactic acid or ethanol, are co-generated during food waste fermentation. A literature review on chain elongation by mixed cultures with complex organic feedstock identified a range of operating conditions and defined the research objectives of this thesis. Firstly, an operating strategy involving organic overload to drive an anaerobic digestion community to acidogenic fermentation in a semi-continuous single-stage stirred tank reactor was evaluated. Start-up at higher feed-to-microbial ratio (>5 gCODfed gVSinoculum-1) and organic loading rates (OLR) (8.5 gCOD L-1 d-1), compared to a parallel anaerobic digester (<1 gCOD gVS-1, 4.2 gCOD L-1 d-1), inhibited methanogenesis and produced volatile fatty acids. Chain elongation was stimulated by switching to a feedstock with higher organic content to give an OLR of up to 21 ± 2 gCOD L-1 d-1 with the same hydraulic retention time (HRT, 14 days). MCCA were produced at similar concentrations to more complicated reactor systems (22 ± 4 gCOD L-1 for n-caproic and 7 ± 2 gCOD L-1 for n-caprylic acid). A specialised community formed that showed in situ lactic acid production followed by chain elongation. The high-COD food waste deactivated methanogenesis and biogas production in anaerobic digestion, suggesting MCCA production is a better use of this feedstock. The OLR is determined by the organic strength of the food waste and the applied hydraulic retention time (HRT), hence the impacts of these parameters were evaluated. The main product from food waste fermentation at 12 gCOD L-1d-1 OLR and 8.5 day HRT was n-butyric acid (13 ± 2 gCOD L-1). Operating at the same 8.5 day HRT but at 20 gCOD L-1d-1 OLR resulted in lactic acid accumulation (34 ± 5 gCOD L-1). This is a similar OLR and lower HRT to the system that stimulated chain elongation in previous experiment. An OLR of 12 gCOD L-1d-1 and a higher HRT of 10.5 days, stimulated chain elongation (n-caproic acid up to 13.6 gCOD L-1). The microbial community was determined by the operating conditions and these together determined product profiles. Longer HRT resulted in greater abundance of lactic-acid producing genera such as Olsenella spp., known to aid chain elongation, and secondary fermenters such as chain elongating species. Operating at higher OLR led to greater abundance of the homolactic genus of Lactobacillus. Hence, the reactor operating strategy can direct product synthesis. This shows the potential for a biorefinery with a flexible product portfolio improving commercial viability and presents an opportunity to repurpose existing single-stage AD systems by adjusting operating strategy. The literature review also suggested the potential of a semi-continuous feeding pattern to stimulate the consecutive fermentation steps required for MCCA. Hence, bi-weekly and daily feeding patterns were compared. Daily feeding resulted in a less stable process due to lactic acid accumulation, which acidified the reactor and required more pH correction. Bi-weekly feeding resulted in higher ethanol and n-caprylic acid yields. Analysis of the microbial communities and their correlation with product formation, coupled with fermentation pathway analysis, revealed a competitive interaction between homolactic Lactobacillus and a consortium of primary fermentation bacteria producing ethanol, acetic and lactic acid with secondary fermenters performing chain elongation. With daily feeding the homolactic Lactobacillus had a competitive edge. Thus, the work reveals competitive and syntrophic interactions in the mixed culture fermentation of food waste. Understanding these provides a route to optimise process design and targeted products. An effective waste management system requires a stable outcome regardless of natural fluctuations in the feedstock. Variations of the food waste collected during the project and their impact on fermentation was assessed via batch reactor studies. Fermenting food waste as employed in anaerobic digestion recycling centres led predominantly to carboxylic acid formation. By contrast, fermentation of fresh cafeteria food waste mainly generated lactic acid. Feedstock storage and pretreatment was shown to affect fermentation and, therefore, the necessary optimal operating conditions. Batch studies also evaluated the impact of sucrose supplementation of the feedstock. Sucrose was found to destabilise fermentation and confirmed the competition between MCCA and lactic acid as the main product. Finally, immiscible, and low density oils present in some food wastes promoted partitioning and concentration of MCCA from the aqueous fermentation broth. This leads to interesting opportunities for utilising oily feedstocks and enhancing downstream processing. The thesis concludes by proposing the necessary operating conditions to direct acidogenic fermentation towards MCCA production in a simple one-stage reactor configuration, such as existing anaerobic digestion assets. Proposals are made for advancing this research to develop a bio-waste valorisation technology that allows sustainable resource recovery contributing to a circular bio-economy.
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- 2021
30. Development and psychometric evaluation of the CO-PARTNER tool for collaboration and parent participation in neonatal care
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van Veenendaal, Nicole R, Auxier, Jennifer N, van der Schoor, Sophie RD, Franck, Linda S, Stelwagen, Mireille A, de Groof, Femke, van Goudoever, Johannes B, Eekhout, Iris E, de Vet, Henrica CW, Axelin, Anna, and van Kempen, Anne AMW
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Paediatrics ,Biomedical and Clinical Sciences ,Pediatric ,Clinical Research ,Infant Mortality ,Perinatal Period - Conditions Originating in Perinatal Period ,Brain Disorders ,Reproductive health and childbirth ,Good Health and Well Being ,Adult ,Female ,Humans ,Infant ,Newborn ,Intensive Care Units ,Neonatal ,Male ,Parents ,Psychometrics ,Reproducibility of Results ,Surveys and Questionnaires ,General Science & Technology - Abstract
BackgroundActive parent participation in neonatal care and collaboration between parents and professionals during infant hospitalization in the neonatal intensive care unit (NICU) is beneficial for infants and their parents. A tool is needed to support parents and to study the effects and implementation of parent-partnered models of neonatal care.MethodsWe developed and psychometrically evaluated a tool measuring active parent participation and collaboration in neonatal care within six domains: Daily Care, Medical Care, Acquiring Information, Parent Advocacy, Time Spent with Infant and Closeness and Comforting the Infant. Items were generated in focus group discussions and in-depth interviews with professionals and parents. The tool was completed at NICU-discharge by 306 parents (174 mothers and 132 fathers) of preterm infants. Subsequently, we studied structural validity with confirmatory factor analysis (CFA), construct validity, using the Average Variance Extracted and Heterotrait-Monotrait ratio of correlations, and hypothesis testing with correlations and univariate linear regression. For internal consistency we calculated composite reliability (CR). We performed multiple imputations by chained equations for missing data.ResultsA 31 item tool for parent participation and collaboration in neonatal care was developed. CFA revealed high factor loadings of items within each domain. Internal consistency was 0.558 to 0.938. Convergent validity and discriminant validity were strong. Higher scores correlated with less parent depressive symptoms (r = -0.141, 95%CI -0.240; -0.029, p = 0.0141), less impaired parent-infant bonding (r = -0.196, 95%CI -0.302; -0.056, p
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- 2021
31. The Solar Orbiter SPICE instrument -- An extreme UV imaging spectrometer
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Consortium, The SPICE, Anderson, M., Appourchaux, T., Auchère, F., Cuadrado, R. Aznar, Barbay, J., Baudin, F., Beardsley, S., Bocchialini, K., Borgo, B., Bruzzi, D., Buchlin, E., Burton, G., Blüchel, V., Caldwell, M., Caminade, S., Carlsson, M., Curdt, W., Davenne, J., Davila, J., DeForest, C. E., Del Zanna, G., Drummond, D., Dubau, J., Dumesnil, C., Dunn, G., Eccleston, P., Fludra, A., Fredvik, T., Gabriel, A., Giunta, A., Gottwald, A., Griffin, D., Grundy, T., Guest, S., Gyo, M., Haberreiter, M., Hansteen, V., Harrison, R., Hassler, D. M., Haugan, S. V. H., Howe, C., Janvier, M., Klein, R., Koller, S., Kucera, T. A., Kouliche, D., Marsch, E., Marshall, A., Marshall, G., Matthews, S. A., McQuirk, C., Meining, S., Mercier, C., Morris, N., Morse, T., Munro, G., Parenti, S., Pastor-Santos, C., Peter, H., Pfiffner, D., Phelan, P., Philippon, A., Richards, A., Rogers, K., Sawyer, C., Schlatter, P., Schmutz, W., Schühle, U., Shaughnessy, B., Sidher, S., Solanki, S. K., Speight, R., Spescha, M., Szwec, N., Tamiatto, C., Teriaca, L., Thompson, W., Tosh, I., Tustain, S., Vial, J. -C., Walls, B., Waltham, N., Wimmer-Schweingruber, R., Woodward, S., Young, P., De Groof, A., Pacros, A., Williams, D., and Müller, D.
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Astrophysics - Instrumentation and Methods for Astrophysics ,Astrophysics - Solar and Stellar Astrophysics - Abstract
The Spectral Imaging of the Coronal Environment (SPICE) instrument is a high-resolution imaging spectrometer operating at extreme ultraviolet (EUV) wavelengths. In this paper, we present the concept, design, and pre-launch performance of this facility instrument on the ESA/NASA Solar Orbiter mission. The goal of this paper is to give prospective users a better understanding of the possible types of observations, the data acquisition, and the sources that contribute to the instrument's signal. The paper discusses the science objectives, with a focus on the SPICE-specific aspects, before presenting the instrument's design, including optical, mechanical, thermal, and electronics aspects. This is followed by a characterisation and calibration of the instrument's performance. The paper concludes with descriptions of the operations concept and data processing. The performance measurements of the various instrument parameters meet the requirements derived from the mission's science objectives. The SPICE instrument is ready to perform measurements that will provide vital contributions to the scientific success of the Solar Orbiter mission., Comment: A&A, accepted 19 August 2019; 26 pages, 25 figures
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- 2019
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32. Design and Control of an Individualized Hip Exoskeleton Capable of Gait Phase Synchronized Flexion and Extension Torque Assistance.
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Sander De Groof, Yang Zhang, Laurent Peyrodie, and Luc Labey
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- 2023
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33. Design and Control of a Size-Adjustable Pediatric Lower-Limb Exoskeleton Based on Weight Shift.
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Yang Zhang, Mathieu Bressel, Sander De Groof, François Dominé, Luc Labey, and Laurent Peyrodie
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- 2023
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34. Long-term health-care utilisation in older patients with cancer and the association with the Geriatric 8 screening tool: a retrospective analysis using linked clinical and population-based data in Belgium
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Depoorter, Victoria, Vanschoenbeek, Katrijn, Decoster, Lore, Silversmit, Geert, Debruyne, Philip R, De Groof, Inge, Bron, Dominique, Cornélis, Frank, Luce, Sylvie, Focan, Christian, Verschaeve, Vincent, Debugne, Gwenaëlle, Langenaeken, Christine, Van Den Bulck, Heidi, Goeminne, Jean-Charles, Teurfs, Wesley, Jerusalem, Guy, Schrijvers, Dirk, Petit, Bénédicte, Rasschaert, Marika, Praet, Jean-Philippe, Vandenborre, Katherine, Milisen, Koen, Flamaing, Johan, Kenis, Cindy, Verdoodt, Freija, and Wildiers, Hans
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- 2023
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35. Cystic kidney diseases in children
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De Groof, J., Dachy, A., Breysem, L., and Mekahli, D.
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- 2023
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36. Linking clinical and population-based data in older patients with cancer in Belgium: Feasibility and clinical outcomes
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Depoorter, Victoria, Vanschoenbeek, Katrijn, Decoster, Lore, De Schutter, Harlinde, Debruyne, Philip R., De Groof, Inge, Bron, Dominique, Cornélis, Frank, Luce, Sylvie, Focan, Christian, Verschaeve, Vincent, Debugne, Gwenaëlle, Langenaeken, Christine, Van Den Bulck, Heidi, Goeminne, Jean-Charles, Teurfs, Wesley, Jerusalem, Guy, Schrijvers, Dirk, Petit, Bénédicte, Rasschaert, Marika, Praet, Jean-Philippe, Vandenborre, Katherine, Milisen, Koen, Flamaing, Johan, Kenis, Cindy, Verdoodt, Freija, and Wildiers, Hans
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- 2023
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37. Development and evaluation of nanobody tracers for noninvasive nuclear imaging of the immune-checkpoint TIGIT
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Katty Zeven, Timo W.M. De Groof, Hannelore Ceuppens, Robin Maximilian Awad, Thomas Ertveldt, Wout de Mey, Fien Meeus, Geert Raes, Karine Breckpot, and Nick Devoogdt
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TIGIT ,immune checkpoint (ICP) ,nuclear imaging ,noninvasive diagnosis ,tracer development ,nanobodies ,Immunologic diseases. Allergy ,RC581-607 - Abstract
IntroductionT cell Ig and ITIM domain receptor (TIGIT) is a next-generation immune checkpoint predominantly expressed on activated T cells and NK cells, exhibiting an unfavorable prognostic association with various malignancies. Despite the emergence of multiple TIGIT-blocking agents entering clinical trials, only a fraction of patients responded positively to anti-TIGIT therapy. Consequently, an urgent demand arises for noninvasive techniques to quantify and monitor TIGIT expression, facilitating patient stratification and enhancing therapeutic outcomes. Small antigen binding moieties such as nanobodies, are promising candidates for such tracer development.MethodsWe generated a panel of anti-human or anti-mouse TIGIT nanobodies from immunized llamas. In addition, we designed a single-chain variable fragment derived from the clinically tested monoclonal antibody Vibostolimab targeting TIGIT, and assessed its performance alongside the nanobodies. In vitro characterization studies were performed, including binding ability and affinity to cell expressed or recombinant TIGIT. After Technetium-99m labeling, the nanobodies and the single-chain variable fragment were evaluated in vivo for their ability to detect TIGIT expression using SPECT/CT imaging, followed by ex vivo biodistribution analysis.ResultsNine nanobodies were selected for binding to recombinant and cell expressed TIGIT with low sub-nanomolar affinities and are thermostable. A six-fold higher uptake in TIGIT-overexpressing tumor was demonstrated one hour post- injection with Technetium-99m labeled nanobodies compared to an irrelevant control nanobody. Though the single-chain variable fragment exhibited superior binding to TIGIT-expressing peripheral blood mononuclear cells in vitro, its in vivo behavior yielded lower tumor-to-background ratios at one hour post- injection, indicating that nanobodies are better suited for in vivo imaging than the single-chain variable fragment. Despite the good affinity, high specificity and on-target uptake in mice in this setting, imaging of TIGIT expression on tumor- infiltrating lymphocytes within MC38 tumors remained elusive. This is likely due to the low expression levels of TIGIT in this model.DiscussionThe excellent affinity, high specificity and rapid on-target uptake in mice bearing TIGIT- overexpressing tumors showed the promising diagnostic potential of nanobodies to noninvasively image high TIGIT expression within the tumor. These findings hold promise for clinical translation to aid patient selection and improve therapy response.
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- 2023
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38. Comparing Training Strategies Using Multi-Assessor Segmentation Labels for Barrett's Neoplasia Detection.
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T. G. W. Boers, Carolus H. J. Kusters, Kiki N. Fockens, Jelmer B. Jukema, Martijn R. Jong, Jeroen de Groof, Jacques J. Bergman, Fons van der Sommen, and Peter H. N. de With
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- 2022
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39. A CAD System for Real-Time Characterization of Neoplasia in Barrett's Esophagus NBI Videos.
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Carolus H. J. Kusters, Tim Boers, Jelmer B. Jukema, Martijn R. Jong, Kiki N. Fockens, Albert J. de Groof, Jacques J. Bergman, Fons van der Sommen, and Peter H. N. de With
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- 2022
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40. Linked color imaging improves identification of early gastric cancer lesions by expert and non-expert endoscopists
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Fockens, Kiki, de Groof, Jeroen, van der Putten, Joost, Khurelbaatar, Tsevelnorov, Fukuda, Hisashi, Takezawa, Takahito, Miura, Yoshimasa, Osawa, Hiroyuki, Yamamoto, Hironori, and Bergman, Jacques
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- 2022
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41. Barrett's lesion detection using a minimal integer-based neural network for embedded systems integration.
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T. G. W. Boers, Carolus H. J. Kusters, Kiki N. Fockens, Jelmer B. Jukema, Martijn R. Jong, Jeroen de Groof, Jacques J. Bergman, Fons van der Sommen, and Peter H. N. de With
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- 2023
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42. Real-time Barrett's neoplasia characterization in NBI videos using an int8-based quantized neural network.
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Carolus H. J. Kusters, T. G. W. Boers, Jelmer B. Jukema, Martijn R. Jong, Kiki N. Fockens, Albert J. de Groof, Jacques J. Bergman, Fons van der Sommen, and Peter H. N. de With
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- 2023
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43. Incidence of falls and fall-related injuries and their predictive factors in frail older persons with cancer: a multicenter study
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Cindy Kenis, Lore Decoster, Johan Flamaing, Philip R. Debruyne, Inge De Groof, Christian Focan, Frank Cornélis, Vincent Verschaeve, Christian Bachmann, Dominique Bron, Heidi Van den Bulck, Dirk Schrijvers, Christine Langenaeken, Pol Specenier, Guy Jerusalem, Jean-Philippe Praet, Jessie De Cock, Jean-Pierre Lobelle, Hans Wildiers, and Koen Milisen
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Older persons ,Cancer ,Frailty ,Falls ,Fall-related injuries ,Geriatric assessment ,Geriatrics ,RC952-954.6 - Abstract
Abstract Background Falls and fall-related injuries are a major public health problem. Data on falls in older persons with cancer is limited and robust data on falls within those with a frailty profile are missing. The aim of this study is to investigate the incidence and predictive factors for falls and fall-related injuries in frail older persons with cancer. Methods This study is a secondary data analysis from data previously collected in a large prospective multicenter observational cohort study in older persons with cancer in 22 Belgian hospitals (November 2012–February 2015). Patients ≥70 years with a malignant tumor and a frailty profile based on an abnormal G8 score were included upon treatment decision and evaluated with a Geriatric Assessment (GA). At follow-up, data on falls and fall-related injuries were documented. Results At baseline 2141 (37.2%) of 5759 included patients reported at least one fall in the past 12 months, 1427 patients (66.7%) sustained an injury. Fall-related data of 3681 patients were available at follow-up and at least one fall was reported by 769 patients (20.9%) at follow-up, of whom 289 (37.6%) fell more than once and a fall-related injury was reported by 484 patients (62.9%). Fear of falling was reported in 47.4% of the patients at baseline and in 55.6% of the patients at follow-up. In multivariable analysis, sex and falls history in the past 12 months were predictive factors for both falls and fall-related injuries at follow-up. Other predictive factors for falls, were risk for depression, cognitive impairment, dependency in activities of daily living, fear of falling, and use of professional home care. Conclusion Given the high number of falls and fall-related injuries and high prevalence of fear of falling, multifactorial falls risk assessment and management programs should be integrated in the care of frail older persons with cancer. Further studies with long-term follow-up, subsequent impact on cancer treatment and interventions for fall prevention, and integration of other important topics like medication and circumstances of a fall, are warranted. Trial registration B322201215495.
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- 2022
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44. 'Zolang ge maar gezond zijt en uwe man nog hebt'
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S. De Groof and M. Elchardus
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gezondheid ,loopbaan ,malaise ,participatie ,persoonlijk welzijn ,sociaal netwerk ,Medicine - Abstract
Dit artikel onderscheidt empirisch verschillende dimensies in de welzijnsbeleving en bestudeert de oorzaken van één van die dimensies, met name de persoonlijke welzijnsbeleving, bij Vlaamse 75-jarigen (N=1456). De analyses brengen het grote belang van een goede gezondheid aan het licht. Naarmate 75-jarigen een goede fysieke en mentale gezondheid hebben, en over voldoende functionele mobiliteit en onafhankelijkheid beschikken, hebben ze een veel positievere welzijnservaring. Ten tweede hebben respondenten die een verliessituatie hebben meegemaakt (in casu hun partner) een veel lager welzijn. Dit verklaart zelfs het gendereffect weg. Vrouwen voelen zich minder goed, hoofdzakelijk omdat zij meer kans hebben om weduwe te zijn dan mannen. Verder vertonen 75-jarigen die hun werk en de arbeidsrol sterk missen lagere welzijnsscores. Respondenten die financieel goed rondkomen, die tevreden zijn met hun sociale contacten en die hun tijd actief doorbrengen, voelen zich tenslotte eveneens beter.
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- 2023
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45. Laparoscopic ileocaecal resection versus infliximab for terminal ileitis in Crohn's disease: retrospective long-term follow-up of the LIR!C trial
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Hart, Ailsa, Warusavitarne, Janindra, Van Bodegraven, Ad A., Brink, Menno A., Consten, Esther C.J., Van Wagensveld, Bart A., Rijk, Marno C.M., Crolla, Rogier M.P.H., Noomen, Casper G., Houdijk, Alexander P.J., Mallant, Rosalie C., Boom, Maarten, Marsman, Willem A., Stockmann, Hein B., De Groof, A. Jeroen, Bruin, Karlien, Maring, John, van Ditzhuijsen, Theo, Prins, Hubert, van den Brande, Jan, Kingma, Paul, van Geloven, Anna, de Boer, Nanne, van der Peet, Donald, Jansen, Jeroen, Gerhards, Michael, van der Woude, Janneke, Schouten, Ruud, Oldenburg, Bas, van Hillegersberg, Richard, West, Rachel, Mannaerts, Guido, Spanier, Marcel, Spillenaar Bilgen, Ernst Jan, Lieverse, Rob, van der Zaag, Edwin, Depla, Annekatrien, van de Laar, Arnold, Bolwerk, Clemens, Brouwer, Hans, Mahmmod, Nofel, Hazebroek, Eric, Vecht, Juda, Pierik, Robert, Dijkstra, Gerard, Hofker, Sijbrand, Uiterwaal, Tessa, Eijsbouts, Quirijn, Oostenbrug, Liekele, Sosef, Meindert, Cahen, Djuna, van der Werff, Sjoerd, Marinelli, Andreas, Peters, Job, Cense, Huib, Talstra, Nynke, Morar, Pritesh, Stevens, Toer W, Haasnoot, Maria L, D'Haens, Geert R, Buskens, Christianne J, de Groof, E Joline, Eshuis, Emma J, Gardenbroek, Tjibbe J, Mol, Bregje, Stokkers, Pieter C F, Bemelman, Willem A, and Ponsioen, Cyriel Y
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- 2020
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46. Functional status in older patients with cancer and a frailty risk profile: A multicenter observational study
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Meert, Glen, Kenis, Cindy, Milisen, Koen, Debruyne, Philip R., De Groof, Inge, Focan, Christian, Cornélis, Frank, Verschaeve, Vincent, Bachmann, Christian, Bron, Dominique, Den Bulck, Heidi Van, Schrijvers, Dirk, Langenaeken, Christine, Specenier, Pol, Jerusalem, Guy, Praet, Jean-Philippe, Lobelle, Jean-Pierre, Flamaing, Johan, Wildiers, Hans, and Decoster, Lore
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- 2022
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47. From Leopold III’s Masters of the Congo Jungle to Contemporary Congolese Eco-Cinema
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De Groof, Matthias, primary
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- 2022
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48. QUAIDE - Quality assessment of AI preclinical studies in diagnostic endoscopy.
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Antonelli, Giulio, Libanio, Diogo, De Groof, Albert Jeroen, van der Sommen, Fons, Mascagni, Pietro, Sinonquel, Pieter, Abdelrahim, Mohamed, Ahmad, Omer, Berzin, Tyler, Bhandari, Pradeep, Bretthauer, Michael, Coimbra, Miguel, Dekker, Evelien, Ebigbo, Alanna, Eelbode, Tom, Frazzoni, Leonardo, Gross, Seth A., Ryu Ishihara, Kaminski, Michal Filip, and Messmann, Helmut
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MACHINE learning ,ARTIFICIAL intelligence ,CLINICAL decision support systems ,COMPUTER-aided diagnosis ,NATURAL language processing ,CLINICAL prediction rules ,PEER review of students ,AKAIKE information criterion - Published
- 2025
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49. Imaging of tumor-associated macrophage dynamics during immunotherapy using a CD163-specific nanobody-based immunotracer.
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Lauwers, Yoline, De Groof, Timo W. M., Vincke, Cécile, Van Craenenbroeck, Jolien, Jumapili, Neema Ahishakiye, Barthelmess, Romina Mora, Courtoy, Guillaume, Waelput, Wim, De Pauw, Tessa, Raes, Geert, Devoogdt, Nick, and Van Ginderachter, Jo A.
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TREATMENT effectiveness , *IMMUNITY , *COMPUTED tomography , *CELL death , *TUMOR microenvironment - Abstract
Immunotherapies have emerged as an effective treatment option for immune-related diseases, such as cancer and inflammatory diseases. However, variations in patient responsiveness limit the broad applicability and success of these immunotherapies. Noninvasive whole-body imaging of the immune status of individual patients during immunotherapy could enable the prediction and monitoring of the patient's response, resulting in more personalized treatments. In this study, we developed a nanobody-based immunotracer targeting CD163, a receptor specifically expressed on macrophages. This anti-CD163 immunotracer bound to human and mouse CD163 with high affinity and specificity without competing for ligand binding. Furthermore, the tracer showed no unwanted immune cell activation and was nonimmunogenic. Upon radiolabeling of the anti-CD163 immunotracer, specific imaging of CD163+ macrophages using micro-single-photon emission computerized tomography/computed tomography or micro-positron emission tomography/CT was performed. The anti-CD163 immunotracer was able to stratify immunotherapy responders from nonresponders (NR) by visualizing differences in the intratumoral CD163+ TAM distribution in Lewis lung carcinoma-ovalbumin tumor-bearing mice receiving an anti-programmed cell death protein-1 (PD-1)/CSF1R combination treatment. Immunotherapy-responding mice showed a more homogeneous distribution of the PET signal in the middle of the tumor, while CD163+ TAMs were located at the tumor periphery in NR. As such, visualization of CD163+ TAM distribution in the tumor microenvironment could allow a prediction or follow-up of therapy response. Altogether, this study describes an immunotracer, specific for CD163+ macrophages, that allows same-day imaging and follow-up of these immune cells in the tumor microenvironment, providing a good basis for the prediction and follow-up of immunotherapy responses in cancer patients. [ABSTRACT FROM AUTHOR]
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- 2024
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50. Imaging and therapeutic targeting of the tumor immune microenvironment with biologics
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Arnouk, Sana, De Groof, Timo W.M., and Van Ginderachter, Jo A.
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- 2022
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