3,212 results on '"A. C. Hamilton"'
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2. Correction for Noh et al., 'Reduced and Nonreduced Genomes in Paraburkholderia Symbionts of Social Amoebas'
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Suegene Noh, Benjamin J. Capodanno, Songtao Xu, Marisa C. Hamilton, Joan E. Strassmann, and David C. Queller
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Microbiology ,QR1-502 - Published
- 2024
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3. Belief-neutral Versus Belief-linked Knowledge as Predictors of Climate-change Opinions
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Adrienne R. Brown and Lawrence C. Hamilton
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History of scholarship and learning. The humanities ,AZ20-999 ,Social Sciences - Abstract
Previous research on climate-relevant knowledge distinguishes between two types: belief-linked (facts which can be guessed based on general climate beliefs) and belief-neutral (facts which require specific knowledge). To better understand these differences, we used data from nationwide US 2016 and 2021 surveys to develop composite indicators of the two types of knowledge. We analyzed demographic predictors of each type, as well as their effect on climate change belief. Further, we examined the issue of trust in science. The findings point to some novel insights. One, not all knowledge is equal; specific, belief-neutral knowledge in particular is less necessary for climate change belief. And two, trust in science is more relevant for fostering climate change belief than either knowledge type. Although this poses certain challenges, given the ideological divide when it comes to scientific trust, it is also useful information for policymakers and science communicators about where to direct energy and resources when engaging with the public.
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- 2024
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4. Brain mechanisms of social signalling in live social interactions with autistic and neurotypical adults
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Sujatha Krishnan-Barman, Uzair Hakim, Marchella Smith, Ilias Tachtsidis, Paola Pinti, and Antonia F. de C Hamilton
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Medicine ,Science - Abstract
Abstract The simple act of watching another person can change a person’s behaviour in subtle but important ways; the individual being watched is now capable of signalling to the watcher, and may use this opportunity to communicate to the watcher. Recent data shows that people will spontaneously imitate more when being watched. Here, we examine the neural and cognitive mechanisms of being watched during spontaneous social imitation in autistic and neurotypical adults using fNIRS brain imaging. Participants (n = 44) took part in a block-moving task where they were instructed only to copy the block sequence which people normally do using a straight low action trajectory. Here, the demonstrator sometimes used an atypical ‘high’ action trajectory, giving participants the opportunity to spontaneously copy the high trajectory even if this slowed their performance. The confederate who demonstrated each block sequence could watch the participant’s actions or close her eyes, giving a factorial design with factors of trajectory (high/low) and watched (watched/unwatched). Throughout the task, brain signals were captured from bilateral temporal/parietal/occipital cortex using fNIRS. We found that all participants performed higher actions when being watched by the confederate than when not being watched, with no differences between autistic and neurotypical participants. The unwatched conditions were associated with higher activity of the right inferior parietal lobule in all participants and also engagement of left STS only in autistic participants. These findings are consistent with the claim that people engage different neural mechanisms when watched and unwatched and that participants with autism may engage additional brain mechanisms to match neurotypical behaviour and compensate for social difficulties. However, further studies will be needed to replicate these results in a larger sample of participants.
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- 2023
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5. Autistic adults benefit from and enjoy learning via social interaction as much as neurotypical adults do
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S. De Felice, A. Hatilova, F. Trojan, I. Tsui, and Antonia F. de C. Hamilton
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Social learning ,Social cognition ,Social interaction ,Autism ,Online education ,Neurology. Diseases of the nervous system ,RC346-429 - Abstract
Abstract Background Autistic people show poor processing of social signals (i.e. about the social world). But how do they learn via social interaction? Methods 68 neurotypical adults and 60 autistic adults learned about obscure items (e.g. exotic animals) over Zoom (i) in a live video-call with the teacher, (ii) from a recorded learner-teacher interaction video and (iii) from a recorded teacher-alone video. Data were analysed via analysis of variance and multi-level regression models. Results Live teaching provided the most optimal learning condition, with no difference between groups. Enjoyment was the strongest predictor of learning: both groups enjoyed the live interaction significantly more than other condition and reported similar anxiety levels across conditions. Limitations Some of the autistic participants were self-diagnosed—however, further analysis where these participants were excluded showed the same results. Recruiting participants over online platforms may have introduced bias in our sample. Future work should investigate learning in social contexts via diverse sources (e.g. schools). Conclusions These findings advocate for a distinction between learning about the social versus learning via the social: cognitive models of autism should be revisited to consider social interaction not just as a puzzle to decode but rather a medium through which people, including neuro-diverse groups, learn about the world around them. Trial registration Part of this work has been pre-registered before data collection https://doi.org/10.17605/OSF.IO/5PGA3
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- 2023
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6. A magnetometer-based method for in-situ syncing of wearable inertial measurement units
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Thomas J. Gilbert, Zexiao Lin, Sally Day, Antonia F. de C. Hamilton, and Jamie A. Ward
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Wearabe sensors ,Synchronization ,IMU (Inertial measurement unit) ,Magnetic field sensor ,multisensor ,Electronic computers. Computer science ,QA75.5-76.95 - Abstract
This paper presents a novel method to synchronize multiple wireless inertial measurement unit sensors (IMU) using their onboard magnetometers. The basic method uses an external electromagnetic pulse to create a known event measured by the magnetometer of multiple IMUs and in turn uses this to synchronize the devices. An initial evaluation using four commercial IMUs reveals a maximum error of 40 ms per hour as limited by a 25 Hz sample rate. Building on this we introduce a novel method to improve synchronization beyond the limitations imposed by the sample rate and evaluate this in a further study using 8 IMUs. We show that a sequence of electromagnetic pulses, in total lasting
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- 2024
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7. Assisted ambulation to improve health outcomes for older medical inpatients (AMBULATE): study protocol for a randomized controlled trial
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Joshua K. Johnson, Aaron C. Hamilton, Bo Hu, Quinn R. Pack, Peter K. Lindenauer, Robert J. Fox, Ardeshir Hashmi, Lee Anne Siegmund, Christian N. Burchill, Glen B. Taksler, Toyomi Goto, Mary Stilphen, and Michael B. Rothberg
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Ambulation ,Activity ,Mobility ,Older adults ,Geriatrics ,Hospital ,Medicine (General) ,R5-920 - Abstract
Abstract Background Hospitalized older adults spend as much as 95% of their time in bed, which can result in adverse events and delay recovery while increasing costs. Observational studies have shown that general mobility interventions (e.g., ambulation) can mitigate adverse events and improve patients’ functional status. Mobility technicians (MTs) may address the need for patients to engage in mobility interventions without overburdening nurses. There is no data, however, on the effect of MT-assisted ambulation on adverse events or functional status, or on the cost tradeoffs if a MT were employed. The AMBULATE study aims to determine whether MT-assisted ambulation improves mobility status and decreases adverse events for older medical inpatients. It will also include analyses to identify the patients that benefit most from MT-assisted mobility and assess the cost-effectiveness of employing a MT. Methods The AMBULATE study is a multicenter, single-blind, parallel control design, individual-level randomized trial. It will include patients admitted to a medical service in five hospitals in two regions of the USA. Patients over age 65 with mild functional deficits will be randomized using a block randomization scheme. Those in the intervention group will ambulate with the MT up to three times daily, guided by the Johns Hopkins Mobility Goal Calculator. The intervention will conclude at hospital discharge, or after 10 days if the hospitalization is prolonged. The primary outcome is the Short Physical Performance Battery score at discharge. Secondary outcomes are discharge disposition, length of stay, hospital-acquired complications (falls, venous thromboembolism, pressure ulcers, and hospital-acquired pneumonia), and post-hospital functional status. Discussion While functional decline in the hospital is multifactorial, ambulation is a modifiable factor for many patients. The AMBULATE study will be the largest randomized controlled trial to test the clinical effects of dedicating a single care team member to facilitating mobility for older hospitalized patients. It will also provide a useful estimation of cost implications to help hospital administrators assess the feasibility and utility of employing MTs. Trial registration Registered in the United States National Library of Medicine clinicaltrials.gov (# NCT05725928). February 13, 2023.
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- 2023
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8. Technical Recommendations for Computed Tomography Guidance of Intervention in the Right Ventricular Outflow Tract: Native RVOT, Conduits and Bioprosthetic Valves: A White Paper of the Society of Cardiovascular Computed Tomography (SCCT), Congenital Heart Surgeons’ Society (CHSS), and Society for Cardiovascular Angiography & Interventions (SCAI)
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Han, B. Kelly, Garcia, Santiago, Aboulhosn, Jamil, Blanke, Phillip, Martin, Mary Hunt, Zahn, Evan, Crean, Andrew, Overman, David, Craig, C. Hamilton, Hanneman, Kate, Semple, Thomas, and Armstrong, Aimee
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- 2023
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9. Trumpism, climate and COVID: Social bases of the new science rejection.
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Lawrence C Hamilton
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Medicine ,Science - Abstract
Although the hazards posed by greenhouse warming and COVID-19 are quite different, diagnosis and mitigation prospects for both depend heavily on science. Unfortunately, the reality of both threats has been subject to politicized science rejection in the US, making these deadly problems less tractable. There are substantial parallels between the two cases of science rejection, including common rhetoric and conservative political leadership. Survey research has reached widely-replicated conclusions regarding the social bases of climate-change perceptions. Corresponding studies of COVID-19 perceptions have found some political commonalities, but less agreement on other details. Here, we address this gap using generalized structural equation modeling (GSEM) and 2021 US survey data to make direct comparisons between the social bases of rejecting the reality of anthropogenic climate change (ACC) and rejecting COVID-19 vaccination. Trumpism, operationalized from approval of ex-president Trump, is viewed as an intervening variable that influences both types of science rejection. Trumpism itself is predicted by age, race, evangelical religion, ideology, and receptivity to seemingly non-political conspiracy beliefs. Considering direct as well as indirect effects (through Trumpism), climate change and vaccine rejection are similarly predicted by white and evangelical identity, conspiracism, and by education×ideology and friends×party interactions. The finding that Trumpism exacerbates science rejection could also apply to other science- and expertise-related topics unrelated to climate and COVID. These results invite broader comparisons across topics, with analogous movements in other countries, and continued tracking as US Trumpism evolves beyond Trump.
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- 2024
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10. Shifting tides: the rising tide of early-onset cancers demands attention
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Helen G Coleman and Ashleigh C Hamilton
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Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Published
- 2023
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11. Using Wearable Sensors to Measure Interpersonal Synchrony in Actors and Audience Members During a Live Theatre Performance.
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Yanke Sun, Dwaynica A. Greaves, Guido Orgs, Antonia F. de C. Hamilton, Sally Day, and Jamie A. Ward
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- 2023
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12. Distinct Molecular Profiles of Sporadic Early-Onset Colorectal Cancer: A Population-Based Cohort and Systematic Review
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Ashleigh C. Hamilton, Finian J. Bannon, Philip D. Dunne, Jacqueline James, Stephen McQuaid, Ronan T. Gray, Manuel Salto-Tellez, Chris R. Cardwell, Maurice B. Loughrey, and Helen G. Coleman
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Microsatellite Instability ,Mismatch Repair ,Mutations ,Diseases of the digestive system. Gastroenterology ,RC799-869 - Abstract
Background and Aims: The observed increase in the incidence of early-onset colorectal cancer (EOCRC) is being driven by sporadic cases, but the molecular characteristics of these tumors are not fully understood. Our objective was to investigate the prevalence of microsatellite instability (MSI) and selected mutations in sporadic EOCRC, and their association with survival. Methods: Firstly, we compared the prevalence of molecular characteristics and survival within a population-based cohort study of 652 stage II and III colon cancer patients in Northern Ireland, comparing sporadic early-onset (
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- 2023
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13. Lessons on Collecting Data from Autistic Children using Wrist-worn Sensors.
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Maria Bell, Elise Robinson, Sally Day, Thomas Jamin Gilbert, Antonia F. de C. Hamilton, and Jamie A. Ward
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- 2022
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14. Increased Perfluorooctanesulfonate (PFOS) Toxicity and Accumulation Is Associated with Perturbed Prostaglandin Metabolism and Increased Organic Anion Transport Protein (OATP) Expression
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Lanie A. Williams, Matthew C. Hamilton, Matthew L. Edin, Fred B. Lih, Jazmine A. Eccles-Miller, Nishanth Tharayil, Elizabeth Leonard, and William S. Baldwin
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bioaccumulation ,PFAS ,OATP ,transporters ,oxylipins ,prostaglandins ,Chemical technology ,TP1-1185 - Abstract
Perfluorooctanesulfonate (PFOS) is a widespread environmental pollutant with a long half-life and clearly negative outcomes on metabolic diseases such as fatty liver disease and diabetes. Male and female Cyp2b-null and humanized CYP2B6-transgenic (hCYP2B6-Tg) mice were treated with 0, 1, or 10 mg/kg/day PFOS for 21 days, and surprisingly it was found that PFOS was retained at greater concentrations in the serum and liver of hCYP2B6-Tg mice than those of Cyp2b-null mice, with greater differences in the females. Thus, Cyp2b-null and hCYP2B6-Tg mice provide new models for investigating individual mechanisms for PFOS bioaccumulation and toxicity. Overt toxicity was greater in hCYP2B6-Tg mice (especially females) as measured by mortality; however, steatosis occurred more readily in Cyp2b-null mice despite the lower PFOS liver concentrations. Targeted lipidomics and transcriptomics from PFOS-treated Cyp2b-null and hCYP2B6-Tg mouse livers were performed and compared to PFOS retention and serum markers of toxicity using PCA. Several oxylipins, including prostaglandins, thromboxanes, and docosahexaenoic acid metabolites, are associated or inversely associated with PFOS toxicity. Both lipidomics and transcriptomics indicate PFOS toxicity is associated with PPAR activity in all models. GO terms associated with reduced steatosis were sexually dimorphic with lipid metabolism and transport increased in females and circadian rhythm associated genes increased in males. However, we cannot rule out that steatosis was initially protective from PFOS toxicity. Moreover, several transporters are associated with increased retention, probably due to increased uptake. The strongest associations are the organic anion transport proteins (Oatp1a4-6) genes and a long-chain fatty acid transport protein (fatp1), enriched in female hCYP2B6-Tg mice. PFOS uptake was also reduced in cultured murine hepatocytes by OATP inhibitors. The role of OATP1A6 and FATP1 in PFOS transport has not been tested. In summary, Cyp2b-null and hCYP2B6-Tg mice provided unique models for estimating the importance of novel mechanisms in PFOS retention and toxicity.
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- 2024
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15. A Simple Method for Synchronising Multiple IMUs using the Magnetometer.
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Thomas Jamin Gilbert, Sally Day, Antonia F. de C. Hamilton, and Jamie A. Ward
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- 2022
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16. Exploring Theater Neuroscience: Using Wearable Functional Near-infrared Spectroscopy to Measure the Sense of Self and Interpersonal Coordination in Professional Actors.
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Dwaynica A. Greaves, Paola Pinti, Sara Din, Robert Hickson, Mingyi Diao, Charlotte Lange, Priyasha Khurana, Kelly Hunter, Ilias Tachtsidis, and Antonia F. de C. Hamilton
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- 2022
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17. Genomic analysis of two phlebotomine sand fly vectors of Leishmania from the New and Old World.
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Frédéric Labbé, Maha Abdeladhim, Jenica Abrudan, Alejandra Saori Araki, Ricardo N Araujo, Peter Arensburger, Joshua B Benoit, Reginaldo Pecanha Brazil, Rafaela V Bruno, Gustavo Bueno da Silva Rivas, Vinicius Carvalho de Abreu, Jason Charamis, Iliano V Coutinho-Abreu, Samara G da Costa-Latgé, Alistair Darby, Viv M Dillon, Scott J Emrich, Daniela Fernandez-Medina, Nelder Figueiredo Gontijo, Catherine M Flanley, Derek Gatherer, Fernando A Genta, Sandra Gesing, Gloria I Giraldo-Calderón, Bruno Gomes, Eric Roberto Guimaraes Rocha Aguiar, James G C Hamilton, Omar Hamarsheh, Mallory Hawksworth, Jacob M Hendershot, Paul V Hickner, Jean-Luc Imler, Panagiotis Ioannidis, Emily C Jennings, Shaden Kamhawi, Charikleia Karageorgiou, Ryan C Kennedy, Andreas Krueger, José M Latorre-Estivalis, Petros Ligoxygakis, Antonio Carlos A Meireles-Filho, Patrick Minx, Jose Carlos Miranda, Michael J Montague, Ronald J Nowling, Fabiano Oliveira, João Ortigão-Farias, Marcio G Pavan, Marcos Horacio Pereira, Andre Nobrega Pitaluga, Roenick Proveti Olmo, Marcelo Ramalho-Ortigao, José M C Ribeiro, Andrew J Rosendale, Mauricio R V Sant'Anna, Steven E Scherer, Nágila F C Secundino, Douglas A Shoue, Caroline da Silva Moraes, João Silveira Moledo Gesto, Nataly Araujo Souza, Zainulabueddin Syed, Samuel Tadros, Rayane Teles-de-Freitas, Erich L Telleria, Chad Tomlinson, Yara M Traub-Csekö, João Trindade Marques, Zhijian Tu, Maria F Unger, Jesus Valenzuela, Flávia V Ferreira, Karla P V de Oliveira, Felipe M Vigoder, John Vontas, Lihui Wang, Gareth D Weedall, Elyes Zhioua, Stephen Richards, Wesley C Warren, Robert M Waterhouse, Rod J Dillon, and Mary Ann McDowell
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Arctic medicine. Tropical medicine ,RC955-962 ,Public aspects of medicine ,RA1-1270 - Abstract
Phlebotomine sand flies are of global significance as important vectors of human disease, transmitting bacterial, viral, and protozoan pathogens, including the kinetoplastid parasites of the genus Leishmania, the causative agents of devastating diseases collectively termed leishmaniasis. More than 40 pathogenic Leishmania species are transmitted to humans by approximately 35 sand fly species in 98 countries with hundreds of millions of people at risk around the world. No approved efficacious vaccine exists for leishmaniasis and available therapeutic drugs are either toxic and/or expensive, or the parasites are becoming resistant to the more recently developed drugs. Therefore, sand fly and/or reservoir control are currently the most effective strategies to break transmission. To better understand the biology of sand flies, including the mechanisms involved in their vectorial capacity, insecticide resistance, and population structures we sequenced the genomes of two geographically widespread and important sand fly vector species: Phlebotomus papatasi, a vector of Leishmania parasites that cause cutaneous leishmaniasis, (distributed in Europe, the Middle East and North Africa) and Lutzomyia longipalpis, a vector of Leishmania parasites that cause visceral leishmaniasis (distributed across Central and South America). We categorized and curated genes involved in processes important to their roles as disease vectors, including chemosensation, blood feeding, circadian rhythm, immunity, and detoxification, as well as mobile genetic elements. We also defined gene orthology and observed micro-synteny among the genomes. Finally, we present the genetic diversity and population structure of these species in their respective geographical areas. These genomes will be a foundation on which to base future efforts to prevent vector-borne transmission of Leishmania parasites.
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- 2023
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18. Forecast Skill of the Arctic Sea Ice Outlook 2008–2022
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Edward Blanchard‐Wrigglesworth, Mitchell Bushuk, François Massonnet, Lawrence C. Hamilton, Cecilia M. Bitz, Walter N. Meier, and Uma S. Bhatt
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Geophysics. Cosmic physics ,QC801-809 - Abstract
Abstract We assess the skill of forecasts of Arctic September sea ice in the Sea Ice Outlook over 2008–2022. The multi‐model median June initialized forecast of September sea ice extent (SIE) is slightly more skilled (RMSE = 0.48 million km2) than a damped anomaly forecast, but July and August initialized forecasts (RMSE = 0.52 and 0.36 million km2 respectively) do not beat this benchmark. The skill of individual dynamical and statistical SIE forecasts is lower than the multi‐model median forecast skill. Overall skill is lower than expected from retrospective forecasts. Several forecasts initialized in early September 2021 and 2022 imply physically improbable values. Spatial forecasts of sea ice concentration show multi‐model forecast skill and an improvement in individual forecast skill in recent years. Initial conditions show large spread in sea ice volume and a positive correlation between initialized sea ice volume and September SIE forecast. Summer weather has an impact on forecast error.
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- 2023
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19. Reliability Characterization of a Flexible Interconnect for Cryogenic and Quantum Applications.
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Emma R. Schmidgall, Flavio Griggio, George H. Thiel, Sherman E. Peek, Bhargav Yelamanchili, Archit Shah, Vaibhav Gupta, John A. Sellers, Michael C. Hamilton, David B. Tuckerman, and Samuel d'Hollosy
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- 2021
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20. Direct Gaze Triggers Higher Frequency of Gaze Change: An Automatic Analysis of Dyads in Unstructured Conversation.
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Georgiana Cristina Dobre, Marco Gillies, Patrick Falk, Jamie A. Ward, Antonia F. de C. Hamilton, and Xueni Pan
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- 2021
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21. Patient, Operator, and Procedural Characteristics of Guidewire Retention as a Complication of Vascular Catheter Insertion
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Nicholas Kassis, MD, Laith Alkukhun, MD, Kathleen Kravitz, RN, Carolyn Miclea, BSN, Amanjit Gill, MD, Chiedozie I. Udeh, MBBS, Piyush Mathur, MD, Aaron C. Hamilton, MD, Sean P. Lyden, MD, Samir R. Kapadia, MD, and Umesh N. Khot, MD
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Medical emergencies. Critical care. Intensive care. First aid ,RC86-88.9 - Abstract
OBJECTIVES:. Guidewire retention after intravascular catheter insertion is considered a “never event.” Prior reports attribute this complication to various characteristics including uncooperative patients, operator inexperience, off-hour or emergent insertion, and underutilization of ultrasound guidance. In this descriptive analysis of consecutive events, we assessed the frequency of patient, operator, and procedural factors in guidewire retention. DESIGN:. Pre-specified observational analysis as part of a quality improvement study of consecutive guidewire retention events across a multihospital health system from August 2007 to October 2015. SETTING:. Ten hospitals within the Cleveland Clinic Health System in Ohio, United States. PATIENTS:. Consecutive all-comers who experienced guidewire retention after vascular catheter insertion. INTERVENTIONS:. None. MEASUREMENTS AND MAIN RESULTS:. Data were manually obtained from the electronic medical records and reviewed for potential contributing factors for guidewire retention, stratified into patient, operator, and procedural characteristics. A total of 24 events were identified. Overall, the median age was 74 years, 58% were males, and the median body mass index was 26.5 kg/m2. A total of 12 (50%) individuals were sedated during the procedure. Most incidents (10 [42%]) occurred in internal jugular venous access sites. The majority of cases (13 [54%]) were performed or supervised by an attending. Among all cases, three (12%) were performed by first-year trainees, seven (29%) by residents, three (12%) by fellows, and four (17%) by certified nurse practitioners. Overall, 16 (67%) events occurred during regular working hours (8 amto 5 pm). In total, 22 (92%) guidewires were inserted nonemergently, with two (8%) during a cardiac arrest. Ultrasound guidance was used in all but one case. CONCLUSIONS:. Guidewire retention can occur even in the presence of optimal patient, operator, and procedural circumstances, highlighting the need for constant awareness of this risk. Efforts to eliminate this important complication will require attention to issues surrounding the technical performance of the procedure.
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- 2023
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22. Are there dedicated neural mechanisms for imitation? A study of grist and mills
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Elizabeth Renner, Yishan Xie, Francys Subiaul, and Antonia F. de C. Hamilton
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Medicine ,Science - Published
- 2023
23. Current challenges for women in orthopaedics
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Maryam Ahmed and Laura C. Hamilton
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orthopaedics ,gender ,bias ,pregnancy ,leadership ,female ,microaggressions ,hidden curriculum ,sterotype ,flexible training ,orthopaedic surgeons ,orthopaedic surgery ,british orthopaedic association ,postoperative complication ,polymethyl methacrylate ,ophthalmology ,cohort study ,depression ,strength’ ,suturing ,Orthopedic surgery ,RD701-811 - Abstract
Orthopaedics has been left behind in the worldwide drive towards diversity and inclusion. In the UK, only 7% of orthopaedic consultants are female. There is growing evidence that diversity increases innovation as well as patient outcomes. This paper has reviewed the literature to identify some of the common issues affecting female surgeons in orthopaedics, and ways in which we can address them: there is a wealth of evidence documenting the differences in the journey of men and women towards a consultant role. We also look at lessons learned from research in the business sector and the military. The ‘Hidden Curriculum’ is out of date and needs to enter the 21st century: microaggressions in the workplace must be challenged; we need to consider more flexible training options and support trainees who wish to become pregnant; mentors, both male and female, are imperative to provide support for trainees. The world has changed, and we need to consider how we can improve diversity to stay relevant and effective. Cite this article: Bone Jt Open 2021;2-10:893–899.
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- 2021
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24. Reduced and Nonreduced Genomes in Paraburkholderia Symbionts of Social Amoebas
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Suegene Noh, Benjamin J. Capodanno, Songtao Xu, Marisa C. Hamilton, Joan E. Strassmann, and David C. Queller
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symbiosis ,protist ,Burkholderia ,Dictyostelium ,genome reduction ,Microbiology ,QR1-502 - Abstract
ABSTRACT The social amoeba Dictyostelium discoideum is a predatory soil protist frequently used for studying host-pathogen interactions. A subset of D. discoideum strains isolated from soil persistently carry symbiotic Paraburkholderia, recently formally described as P. agricolaris, P. bonniea, and P. hayleyella. The three facultative symbiont species of D. discoideum present a unique opportunity to study a naturally occurring symbiosis in a laboratory model protist. There is a large difference in genome size between P. agricolaris (8.7 million base pairs [Mbp]) versus P. hayleyella and P. bonniea (4.1 Mbp). We took a comparative genomics approach and compared the three genomes of D. discoideum symbionts to 12 additional Paraburkholderia genomes to test for genome evolution patterns that frequently accompany host adaptation. Overall, P. agricolaris is difficult to distinguish from other Paraburkholderia based on its genome size and content, but the reduced genomes of P. bonniea and P. hayleyella display characteristics indicative of genome streamlining rather than deterioration during adaptation to their protist hosts. In addition, D. discoideum-symbiont genomes have increased secretion system and motility genes that may mediate interactions with their host. Specifically, adjacent BurBor-like type 3 and T6SS-5-like type 6 secretion system operons shared among all three D. discoideum-symbiont genomes may be important for host interaction. Horizontal transfer of these secretion system operons within the amoeba host environment may have contributed to the unique ability of these symbionts to establish and maintain a symbiotic relationship with D. discoideum. IMPORTANCE Protists are a diverse group of typically single cell eukaryotes. Bacteria and archaea that form long-term symbiotic relationships with protists may evolve in additional ways than those in relationships with multicellular eukaryotes such as plants, animals, or fungi. Social amoebas are a predatory soil protist sometimes found with symbiotic bacteria living inside their cells. They present a unique opportunity to explore a naturally occurring symbiosis in a protist frequently used for studying host-pathogen interactions. We show that one amoeba-symbiont species is similar to other related bacteria in genome size and content, while the two reduced-genome-symbiont species show characteristics of genome streamlining rather than deterioration during adaptation to their host. We also identify sets of genes present in all three amoeba-symbiont genomes that are potentially used for host-symbiont interactions. Because the amoeba symbionts are distantly related, the amoeba host environment may be where these genes were shared among symbionts.
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- 2022
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25. The INTERSPEECH 2020 Computational Paralinguistics Challenge: Elderly Emotion, Breathing & Masks.
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Björn W. Schuller, Anton Batliner, Christian Bergler, Eva-Maria Messner, Antonia F. de C. Hamilton, Shahin Amiriparian, Alice Baird, Georgios Rizos, Maximilian Schmitt, Lukas Stappen, Harald Baumeister, Alexis Deighton MacIntyre, and Simone Hantke
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- 2020
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26. Deep Attentive End-to-End Continuous Breath Sensing from Speech.
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Alexis Deighton MacIntyre, Georgios Rizos, Anton Batliner, Alice Baird, Shahin Amiriparian, Antonia F. de C. Hamilton, and Björn W. Schuller
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- 2020
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27. Association between limiting the number of open records in a tele-critical care setting and retract-reorder errors.
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Chiedozie Udeh, Christina Canfield, Isaac Briskin, and Aaron C. Hamilton
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- 2021
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28. Change in prevalence of post-traumatic stress disorder in the two years following trauma: a meta-analytic study
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P. R. Diamond, J. N. Airdrie, R. Hiller, A. Fraser, L. V. Hiscox, C. Hamilton-Giachritsis, and S. L. Halligan
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post-traumatic stress disorder ,ptsd ,meta-analysis ,longitudinal ,prevalence ,adults ,Psychiatry ,RC435-571 - Abstract
Background: Understanding the course of post-traumatic stress disorder (PTSD) and the factors that impact this is essential to inform decisions about when and for whom screening and intervention are likely to be beneficial. Objective: To provide meta-analytic evidence of the course of recovery from PTSD in the first year following trauma, and the factors that influence that recovery. Method: We conducted a meta-analysis of observational studies of adult PTSD prevalence which included at least two assessments within the first 12 months following trauma exposure, examining prevalence statistics through to 2 years post-trauma. We examined trauma intentionality (intentional or non-intentional), PTSD assessment method (clinician or self-report), sample sex distribution, and age as moderators of PTSD prevalence over time. Results: We identified 78 eligible studies including 16,484 participants. Pooled prevalence statistics indicated that over a quarter of individuals presented with PTSD at 1 month post-trauma, with this proportion reducing by a third between 1 and 3 months. Beyond 3 months, any prevalence changes were detected over longer intervals and were small in magnitude. Intentional trauma, younger age, and female sex were associated with higher PTSD prevalence at 1 month. In addition, higher proportions of females, intentional trauma exposure, and higher baseline PTSD prevalence were each associated with larger reductions in prevalence over time. Conclusions: Recovery from PTSD following acute trauma exposure primarily occurs in the first 3 months post-trauma. Screening measures and intervention approaches offered at 3 months may better target persistent symptoms than those conducted prior to this point. HIGHLIGHTS PTSD rates in the immediate aftermath of trauma exposure decline from 27% at 1 month to 18% at 3 months post-trauma, showing significant spontaneous recovery. Problems appear to stabilize after 3 months. Screening/intervention for PTSD at 3 months post-trauma is indicated.
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- 2022
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29. Seeing motion of controlled object improves grip timing in adults with autism spectrum condition: evidence for use of inverse dynamics in motor control
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Takamuku, Shinya, Ohta, Haruhisa, Kanai, Chieko, de C. Hamilton, Antonia F., and Gomi, Hiroaki
- Published
- 2021
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30. Significant reduction in abundance of peridomestic mosquitoes (Culicidae) and Culicoides midges (Ceratopogonidae) after chemical intervention in western São Paulo, Brazil
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Mikel A. González, Erin Dilger, María M. Ronderos, Gustavo R. Spinelli, Orin Courtenay, and James G. C. Hamilton
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Abundance ,Brazil ,Culicidae ,Culicoides ,Insecticide intervention ,Distribution ,Infectious and parasitic diseases ,RC109-216 - Abstract
Abstract Background We assessed the impact of two sand fly insecticide interventions (insecticide spraying and insecticide-impregnated dog collars) on the peridomestic abundance and distribution of mosquitoes (Culicidae) and biting midges (Ceratopogonidae) in western São Paulo (Brazil) in a long-term (42-month) evaluation. Both of these dipteran groups are vectors of diseases of medical and veterinary relevance to humans and domestic animals in Brazil. Methods The interventions in the 3-arm stratified randomised control trial were: pheromone + insecticide (PI) (chicken roosts were sprayed with microencapsulated lambda-cyhalothrin; pheromone lure has no effect on the Diptera pests studied here); dog-collars (DC) (dogs fitted with deltamethrin-impregnated collars); and control (C) (unexposed to pyrethroids) were extended by 12 months. During that time, adult mosquitoes and midges were sampled along 280 households at three household locations (inside human dwellings, dog sleeping sites and chicken roosts). Results We collected 3145 culicids (9 genera, 87.6% Culex spp.) distributed relatively uniformly across all 3 arms: 41.9% at chicken roosts; 37.7% inside houses; and 20.3% at dog sleeping sites. We collected 11,464 Culicoides (15 species) found mostly at chicken roosting sites (84.7%) compared with dog sleeping sites (12.9%) or houses (2.4%). Mosquitoes and Culicoides were most abundant during the hot and rainy season. Increased daytime temperature was marginally associated with increased mosquito abundance (Z = 1.97, P = 0.049) and Culicoides abundance (Z = 1.71, P = 0.087). There was no significant association with daily average rainfall for either group. Household-level mosquito and midge numbers were both significantly reduced by the PI intervention 56% [incidence rate ratio, IRR = 0.54 (95% CI: 0.30–0.97), P ≤ 0.05] and 53% [IRR = 0.47 (95% CI: 0.26–0.85), P ≤ 0.05], respectively, compared to the control intervention. The abundance of both dipteran groups at dog sleeping sites was largely unaffected by the PI and DC interventions. The PI intervention significantly reduced abundance of mosquitoes inside houses (41%) and at chicken roosting sites (48%) and reduced midge abundance by 51% in chicken roosting sites. Conclusions Sprayed insecticide at chicken roosting sites reduced the abundance of mosquitoes and midges at the peridomestic level while dog collars had no effect on numbers for any group.
- Published
- 2020
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31. Limiting the number of open charts does not impact wrong patient order entry in the emergency department
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Christina Canfield, Chiedozie Udeh, Heather Blonsky, Aaron C. Hamilton, and Baruch S. Fertel
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electronic health record ,emergency department ,information technology ,patient safety ,prescribing errors ,quality improvement ,Medical emergencies. Critical care. Intensive care. First aid ,RC86-88.9 - Abstract
Abstract Objective We sought to examine the impact of limiting the number of open active charts on wrong patient order entry events among 13 emergency departments (EDs) in a large integrated health system. Methods A retrospective chart review of all orders placed between September 2017 and September 2019 was conducted. The rate of retract and reorder events was analyzed with no overlap in both the period pre‐ and post‐intervention period. Secondary analysis of error rate by clinician type, clinician patient load, and time of day was performed. Results The order retraction rate was not improved pre‐ and post‐intervention. Retraction rates varied by clinician type with residents retracting more often than physicians (odds ratio [OR] = 1.443 [1.349, 1.545]). Advanced practice providers also showed a slightly higher rate than physicians (OR = 1.114 [1.071, 1.160]). Pharmacists showed very low rates compared to physicians (OR = 0.191 [0.048, 0.764]). Time of day and staffing ratios appear to be a factor with wrong patient order entry rates slightly lower during the night (1900–0700) than the day (OR 0.958 [0.923, 0.995]), and increasing slightly with every additional patient per provider (OR 1.019 [1.005, 1.032]). The Academic Medical Center had more retractions that the other EDs. OR for the various ED types compared to the Academic Medical Center included Community (OR 0.908 [0.859, 0.959]), Teaching Hospitals (OR 0.850 [0.802, 0.900]), and Freestanding (OR 0.932 [0.864, 1.006]). Conclusions Limiting the number of open active charts from 4 to 2 did not significantly reduce the incidence of wrong patient order entry. Further investigation into other factors contributing to order entry errors is warranted.
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- 2020
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32. Mindfulness in primary school children as a route to enhanced life satisfaction, positive outlook and effective emotion regulation
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R. Amundsen, L. M. Riby, C. Hamilton, M. Hope, and D. McGann
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Mindfulness ,Wellbeing ,Schools ,Cognitive reappraisal ,Positive psychology ,Psychology ,BF1-990 - Abstract
Abstract Background Mindfulness programmes as a potential avenue of enhancing pupil wellbeing are beginning to show great promise. However, research concerning the effectiveness of mindfulness training for primary aged school children (7–11 years of age) has been neglected. Methods Building on methodological limitations of prior research, this study employed an active controlled design to assess the longer term wellbeing and emotion regulation outcomes after a 6 week mindfulness programme (Living Mindfully Programme, UK), for a group of school children aged between 9 and 10. The programme was delivered by class teachers as part of their normal curriculum entitlement. One hundred and eight children took part from across three schools in North East of England. Participants formed a treatment group (n = 64), active control (n = 19) and wait list control (n = 25). Self-report measures of wellbeing, mindfulness and emotion regulation were collected at pre and post training as well as at 3 months follow up. Results Reliable findings, judged by medium to large effect sizes across both post intervention, follow-up and between both controls, demonstrated enhancement in a number of domains. Immediately after training and follow up, when compared with the wait list control, children who received mindfulness training showed significant improvements in mindfulness (d = .76 and .77), Positive Outlook (d = .55 and .64) and Life Satisfaction (d = .65 and 0.72). Even when compared to an active control, the effects remained although diminished reflecting the positive impact of the active control condition. Furthermore, a significant positive relationship was found between changes in mindfulness and changes in cognitive reappraisal. Conclusions Taken together, this study provides preliminary evidence that the Living Mindfully Primary Programme is feasibly delivered by school staff, enjoyed by the children and may significantly improve particular components of wellbeing. Importantly, higher levels of mindfulness as a result of training may be related to effective emotional regulatory and cognitive reappraisal strategies.
- Published
- 2020
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33. Pungent parks: smell’s growing relevance in park tourism
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William L. Rice, Garrett C. Hamilton, and Peter Newman
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parks ,outdoor recreation ,sensory tourism ,smellscapes ,Social Sciences - Abstract
Purpose - The purpose of this paper is to present the growing relevance of natural smells – both pleasant and unpleasant – to park and protected area tourism and the need for more consideration of their role in the visitor experience. Design/methodology/approach - This paper presents four observations – selected via an informal review of the tourism literature – relevant to the future of smellscapes research concerning tourism in parks and protected areas. Findings - An emerging body of literature is indicating natural smells are central to the sensory experience of parks and protected areas. The iconic nature of park smellscapes underscores their role in the tourism experience. Originality/value - This paper extracts the current trends in smellscapes research relevant to park and protected area tourism. It therefore provides value to both tourism practitioners and researchers, alike, through its attempt to compile significant trends.
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- 2020
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34. Circulating TNF-like protein 1A (TL1A) is elevated early in rheumatoid arthritis and depends on TNF
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Yun-Jeong Song, In Ah. Choi, Françoise Meylan, M. Kristen Demoruelle, Taylor Farley, Arianne C. Richard, Eric Hawley, John Botson, Yoo Jin Hong, Eun Young Lee, Sabina R. Mian, Bartlett C. Hamilton, Geoffrey M. Thiele, Ted R. Mikuls, Naveen Gara, Chris D. Ward, Sarah Lamberth, Kevin D. Deane, Theo Heller, Michael M. Ward, David M. Lee, Thi-Sau Migone, William Stohl, James R. O’Dell, Jill M. Norris, V. Michael Holers, Peter Gregersen, Yeong-Wook Song, and Richard M. Siegel
- Subjects
Rheumatoid arthritis ,Cytokines ,Tumor necrosis factor-like cytokine 1A ,TNFSF15 ,Collagen-induced arthritis ,Diseases of the musculoskeletal system ,RC925-935 - Abstract
Abstract Background The tumor necrosis factor (TNF) superfamily cytokine TNF-like protein 1A (TL1A) and its receptor DR3 are essential for diverse animal models of autoimmune disease and may be pathogenic in rheumatoid arthritis (RA). However, the relationship of TL1A to disease duration, activity, and response to anti-TNF and other therapies in RA is not clear. Methods We measured soluble TL1A in synovial fluid (SF), serum, or plasma from RA first-degree relatives (FDRs) and in early RA and established disease. We measured the effects of anti-TNF and methotrexate (MTX) therapy on circulating TL1A from multiple independent RA treatment trials. We also determined the ability of a blocking anti-TL1A antibody to inhibit clinical disease and articular bone destruction in the murine collagen-induced arthritis (CIA) model of human RA. Results Soluble TL1A was specifically elevated in the blood and SF of patients with RA compared to patients with other diseases and was elevated early in disease and in at-risk anti-cyclic citrullinated peptide (CCP) (+) first-degree relatives (FDRs). Therapeutic TNF inhibition reduced serum TL1A in both responders and non-responders, whereas TL1A declined following MTX treatment only in responders. In murine CIA, TL1A blockade was clinically efficacious and reduced bone erosions. Conclusions TL1A is specifically elevated in RA from early in the disease course and in at-risk FDRs. The decline in TL1A after TNF blockade suggests that TL1A levels may be a useful biomarker for TNF activity in RA. These results support the further investigation of the relationship between TL1A and TNF and TL1A blockade as a potential therapeutic strategy in RA.
- Published
- 2020
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35. Reduced nonverbal interpersonal synchrony in autism spectrum disorder independent of partner diagnosis: a motion energy study
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A. L. Georgescu, S. Koeroglu, A. F de C Hamilton, K. Vogeley, C. M. Falter-Wagner, and W. Tschacher
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Interpersonal synchrony ,Interactional heterogeneity ,Interpersonal coordination ,Autism spectrum disorder ,Social interaction ,Motion energy analysis ,Neurology. Diseases of the nervous system ,RC346-429 - Abstract
Abstract Background One of the main diagnostic features of individuals with autism spectrum disorders is nonverbal behaviour difficulties during naturalistic social interactions. The ‘Interactional Heterogeneity Hypothesis’ of ASD proposes that the degree to which individuals share a common ground substantially influences their ability to achieve smooth social interactions. Methods To test this hypothesis, we filmed 29 autistic and 29 matched typically developed adults engaged in several conversational tasks. Windowed cross-lagged correlations were computed using the time series of motion energy of both individuals in a dyad. These coefficients were then compared across the three dyad types that were homo- or heterogenous with respect to diagnosis: pairs of two autistic individuals, two typically developed individuals or pairs of one autistic and one typically developed person. Results We found that all dyad types achieved above-chance interpersonal synchrony, but that synchrony was more expressed in typical dyads compared to both autistic and mixed dyads. Limitations The method presented here provides only one, albeit objective and robust, approach to explore synchrony. The methodological choices as well as the lack of consideration for other communication modalities may limit our interpretation of the findings. Moreover, the sample size is small with respect to exploring associations between synchrony and various outcome and social skill measures. Conclusions The present results do not provide support for the Interactional Heterogeneity Hypothesis given that autistic individuals do not coordinate better when interacting with another autistic individual, compared to when interacting with a typical individual.
- Published
- 2020
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36. Classical-quantum localization in one dimensional systems: The kicked rotor
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C. Hamilton and J. Pérez-Ríos
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Physics ,QC1-999 - Abstract
This work explores the origin of dynamical localization in one-dimensional systems using the kicked rotor as an example. In particular, we propose the fractal dimension of the phase space as a robust indicator to characterize the onset of classical chaos. As a result, we find that the system crosses the stability border when the fractal dimension ≥1.81, and we obtain a functional form for the fractal dimension as a function of the kick strength. At the same time, dynamical localization is explored in the quantum realm by looking into the energy–localization relationship across the classical stability border, thus finding a correlation between the classical chaos and the presence of dynamical localization.
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- 2022
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37. Quantification of inter-brain coupling: A review of current methods used in haemodynamic and electrophysiological hyperscanning studies.
- Author
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Uzair Hakim, S. De Felice, Paola Pinti, Xian Zhang, J. Adam Noah, Yumie Ono, Paul W. Burgess, Antonia F. de C. Hamilton, Joy Hirsch, and Ilias Tachtsidis
- Published
- 2023
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38. Status and Power Do Not Modulate Automatic Imitation of Intransitive Hand Movements
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Farmer, Harry, Carr, Evan W, Svartdal, Marita, Winkielman, Piotr, and de C. Hamilton, Antonia F
- Subjects
Biological Psychology ,Social and Personality Psychology ,Information and Computing Sciences ,Psychology ,Human-Centred Computing ,Behavioral and Social Science ,Attention ,Automatism ,Female ,Fingers ,Hierarchy ,Social ,Humans ,Imitative Behavior ,Learning ,Male ,Psychomotor Performance ,Reaction Time ,Task Performance and Analysis ,General Science & Technology - Abstract
The tendency to mimic the behaviour of others is affected by a variety of social factors, and it has been argued that such "mirroring" is often unconsciously deployed as a means of increasing affiliation during interpersonal interactions. However, the relationship between automatic motor imitation and status/power is currently unclear. This paper reports five experiments that investigated whether social status (Experiments 1, 2, and 3) or power (Experiments 4 and 5) had a moderating effect on automatic imitation (AI) in finger-movement tasks, using a series of different manipulations. Experiments 1 and 2 manipulated the social status of the observed person using an associative learning task. Experiment 3 manipulated social status via perceived competence at a simple computer game. Experiment 4 manipulated participants' power (relative to the actors) in a card-choosing task. Finally, Experiment 5 primed participants using a writing task, to induce the sense of being powerful or powerless. No significant interactions were found between congruency and social status/power in any of the studies. Additionally, Bayesian hypothesis testing indicated that the null hypothesis should be favoured over the experimental hypothesis in all five studies. These findings are discussed in terms of their implications for AI tasks, social effects on mimicry, and the hypothesis of mimicry as a strategic mechanism to promote affiliation.
- Published
- 2016
39. Comparable rates of secondary surgery between anterior cruciate ligament repair with suture tape augmentation and anterior cruciate ligament reconstruction
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G. P. Hopper, W. T. Wilson, L. O’Donnell, C. Hamilton, M. J. G. Blyth, and G. M. MacKay
- Subjects
Orthopedic surgery ,RD701-811 - Abstract
Abstract Purpose The aim of this study was to determine the frequency of secondary surgery following anterior cruciate ligament (ACL) repair with suture tape augmentation in comparison to conventional hamstring ACL reconstruction. We hypothesised that there would be no differences between the groups. Methods This was a retrospective comparison study of patients undergoing ACL surgery between September 2011 and April 2018. Two hundred and 73 patients underwent ACL reconstruction using hamstring autograft. During the same timeframe, 137 patients with an acute proximal ACL rupture underwent ACL repair with suture tape augmentation. One patient was lost to follow‐up in the ACL reconstruction group leaving 272 patients (99.6%) for the final analysis. In the ACL repair group, three patients were lost to follow‐up leaving 134 patents (97.8%) for the final analysis. Secondary surgery was identified by contacting the patients by email/telephone and reviewing patient notes at the time of this analysis. Results Re‐rupture occurred in 32 patients (11.8%) in the ACL reconstruction group compared to 22 patients (16.4%) in the ACL repair group (p = 0.194). Contralateral ACL rupture occurred in four patients (1.5%) in the ACL reconstruction group compared to three patients (2.2%) in the ACL repair group (p = 0.224). In the ACL reconstruction group, nine patients (3.3%) required secondary meniscal surgery whilst five patients (3.7%) required meniscal surgery in the ACL repair group (p = 0.830). Seven other operations were performed in the ACL reconstruction group (2.6%) compared to three other operations in the ACL repair group (2.2%) (p = 0.374). The overall number of patients undergoing secondary surgery in the ACL reconstruction group was 52 (19.1%) in comparison to 30 (22.4%) in the ACL repair group (p = 0.114). Conclusion ACL repair with suture tape augmentation for acute proximal ruptures demonstrated comparable rates of secondary surgery with hamstring ACL reconstruction.
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- 2022
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40. Examination of the interior of sand fly (Diptera: Psychodidae) abdomen reveals novel cuticular structures involved in pheromone release: Discovering the manifold.
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Gabriel B Tonelli, José D Andrade-Filho, Aldenise M Campos, Carina Margonari, Amanda R Amaral, Petr Volf, Elisabeth J Shaw, and James G C Hamilton
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Arctic medicine. Tropical medicine ,RC955-962 ,Public aspects of medicine ,RA1-1270 - Abstract
The males of many species of New World Phlebotomines produce volatile terpenoid chemicals, shown in Lutzomyia longipalpis s.l. to be sex/aggregation pheromones. Pheromone is produced by secretory cells which surround a cuticular reservoir which collects the pheromone and passes it through a cuticular duct to the surface of the insect. The pheromone then passes through specialised cuticular structures on the abdominal surface prior to evaporation. The shape and distribution of the specialised structures are highly diverse and differ according to species. In this study we used SEM to examine the interior cuticular pheromone collection and transport structures of 3 members of the Lu. longipalpis s.l. species complex and Migonemyia migonei. We found a new structure which we have called the manifold which appears to be a substantial extension of the interior tergal cuticle connected in-line with the cuticular duct and reservoir. The manifold of the Campo Grande member of the complex is longer and wider than the Jacobina member whereas the manifold of the Sobral member was shorter than both other members of the complex. Overall, the secretory apparatus of the Sobral member was smaller than the other two. The manifold of M. migonei was very different to those found in Lu. longipalpis s.l. and was positioned in a pit-like structure within the tergal cuticle. The secretory reservoir was connected by a short duct to the manifold. Differences in the size and shape of the manifold may be related to the chemical structure of the pheromone and may have taxonomic value. Examination of the interior cuticle by SEM may help to locate the secretory apparatus of vector species where pheromonal activity has been inferred from behavioural studies but the external secretory structures or pheromones have not yet been found.
- Published
- 2021
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41. Toward Learning in Neuromorphic Circuits Based on Quantum Phase Slip Junctions
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Ran Cheng, Uday S. Goteti, Harrison Walker, Keith M. Krause, Luke Oeding, and Michael C. Hamilton
- Subjects
quantum phase slip junction ,Josephson junction ,neuromorphic computing ,spike timing dependent plasticity ,unsupervised learning ,coupled synapse networks ,Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Abstract
We explore the use of superconducting quantum phase slip junctions (QPSJs), an electromagnetic dual to Josephson Junctions (JJs), in neuromorphic circuits. These small circuits could serve as the building blocks of neuromorphic circuits for machine learning applications because they exhibit desirable properties such as inherent ultra-low energy per operation, high speed, dense integration, negligible loss, and natural spiking responses. In addition, they have a relatively straight-forward micro/nano fabrication, which shows promise for implementation of an enormous number of lossless interconnections that are required to realize complex neuromorphic systems. We simulate QPSJ-only, as well as hybrid QPSJ + JJ circuits for application in neuromorphic circuits including artificial synapses and neurons, as well as fan-in and fan-out circuits. We also design and simulate learning circuits, where a simplified spike timing dependent plasticity rule is realized to provide potential learning mechanisms. We also take an alternative approach, which shows potential to overcome some of the expected challenges of QPSJ-based neuromorphic circuits, via QPSJ-based charge islands coupled together to generate non-linear charge dynamics that result in a large number of programmable weights or non-volatile memory states. Notably, we show that these weights are a function of the timing and frequency of the input spiking signals and can be programmed using a small number of DC voltage bias signals, therefore exhibiting spike-timing and rate dependent plasticity, which are mechanisms to realize learning in neuromorphic circuits.
- Published
- 2021
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42. Correction: Enhanced attraction of sand fly vectors of Leishmania infantum to dogs infected with zoonotic visceral leishmaniasis
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Ifhem Chelbi, Khouloud Maghraoui, Sami Zhioua, Saifedine Cherni, Imen Labidi, Abhay Satoskar, James G. C. Hamilton, and Elyes Zhioua
- Subjects
Arctic medicine. Tropical medicine ,RC955-962 ,Public aspects of medicine ,RA1-1270 - Published
- 2021
43. Methodology to Characterize Thermal Properties of Thin Film Superconductors Using a DynaCool Physical Property Measurement System
- Author
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Harshil Goyal, Sherman E. Peek, John A. Sellers, and Michael C. Hamilton
- Subjects
Electrical and Electronic Engineering ,Condensed Matter Physics ,Electronic, Optical and Magnetic Materials - Published
- 2023
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44. Transport Properties of NbN Thin Films Patterned With a Focused Helium Ion Beam
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Hao Li, Han Cai, Joseph Forman, Ran Cheng, George Hughes, Harrison Walker, Michael C. Hamilton, Lei Chen, Weijun Zhang, Lixing You, and Shane A. Cybart
- Subjects
Electrical and Electronic Engineering ,Condensed Matter Physics ,Electronic, Optical and Magnetic Materials - Published
- 2023
- Full Text
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45. Copper Encapsulated Ultra-Thin NbN Films and Damascene Structures on 300 mm Si Wafers
- Author
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Soumen Kar, Harrison Walker, Archit Shah, Hunter Frost, Stephen Olson, John Mucci, Jakub Nalaskowski, Brian Martinick, Sandra Schujman, Thomas Murray, Corbet S. Johnson, Ilyssa Wells, Ronald Bourque, Stanley Pierce, Ekta Bhatia, Michael C. Hamilton, and Satyavolu S. Papa Rao
- Subjects
Electrical and Electronic Engineering ,Condensed Matter Physics ,Electronic, Optical and Magnetic Materials - Published
- 2023
- Full Text
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46. Influence of Laser Processing Proximity on Superconducting Film Performance
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Sherman E. Peek, Archit Shah, Grant Gleason, Jacob Ward, Mark L. Adams, and Michael C. Hamilton
- Subjects
Electrical and Electronic Engineering ,Condensed Matter Physics ,Electronic, Optical and Magnetic Materials - Published
- 2023
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47. P1728: THE FUTURE OF MYELODYSPLASTIC SYNDROME – PATIENT PRIORITIES AND OUTCOMES THAT MATTER
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M. Poynton, C. Hamilton Gilmour, I. Dale-Harris, E. Clarke, S. Stanworth, M. Murphy, and N. Roy
- Subjects
Diseases of the blood and blood-forming organs ,RC633-647.5 - Published
- 2022
- Full Text
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48. A magnetometer-based method for in-situ syncing of wearable inertial measurement units.
- Author
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Gilbert, Thomas J., Zexiao Lin, Day, Sally, de C. Hamilton, Antonia F., and Ward, Jamie A.
- Published
- 2024
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49. Estimating the relative fitness of escaped farmed salmon offspring in the wild and modelling the consequences of invasion for wild populations
- Author
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Emma V. A. Sylvester, Brendan F. Wringe, Steven J. Duffy, Lorraine C. Hamilton, Ian A. Fleming, Marco Castellani, Paul Bentzen, and Ian R. Bradbury
- Subjects
aquaculture impacts ,fish farming ,introgression ,population eco‐genetic modelling ,relative fitness ,Salmo salar ,Evolution ,QH359-425 - Abstract
Abstract Throughout their native range, wild Atlantic salmon populations are threatened by hybridization and introgression with escapees from net‐pen salmon aquaculture. Although domestic–wild hybrid offspring have shown reduced fitness in laboratory and field experiments, consequential impacts on population abundance and genetic integrity remain difficult to predict in the field, in part because the strength of selection against domestic offspring is often unknown and context‐dependent. Here, we follow a single large escape event of farmed Atlantic salmon in southern Newfoundland and monitor changes in the in‐river proportions of hybrids and feral individuals over time using genetically based hybrid identification. Over a three‐year period following the escape, the overall proportion of wild parr increased consistently (total wild proportion of 71.6%, 75.1% and 87.5% each year, respectively), with subsequent declines in feral (genetically pure farmed individuals originating from escaped, farmed adults) and hybrid parr. We quantify the strength of selection against parr of aquaculture ancestry and explore the genetic and demographic consequences for populations in the region. Within‐cohort changes in the relative proportions of feral and F1 parr suggest reduced relative survival compared to wild individuals over the first (0.15 and 0.81 for feral and F1, respectively) and second years of life (0.26, 0.83). These relative survivorship estimates were used to inform an individual‐based salmon eco‐genetic model to project changes in adult abundance and overall allele frequency across three invasion scenarios ranging from short‐term to long‐term invasion and three relative survival scenarios. Modelling results indicate that total population abundance and time to recovery were greatly affected by relative survivorship and predict significant declines in wild population abundance under continued large escape events and calculated survivorship. Overall, this work demonstrates the importance of estimating the strength of selection against domestic offspring in the wild to predict the long‐term impact of farmed salmon escape events on wild populations.
- Published
- 2019
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50. Susceptibility of wild-caught Lutzomyia longipalpis (Diptera: Psychodidae) sand flies to insecticide after an extended period of exposure in western São Paulo, Brazil
- Author
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Mikel A. González, Melissa J. Bell, Scott A. Bernhardt, Reginaldo P. Brazil, Erin Dilger, Orin Courtenay, and James G. C. Hamilton
- Subjects
Lutzomyia longipalpis ,Insecticide susceptibility ,KDT ,Sex-aggregation pheromone ,Long-exposure ,Lambda-cyhalothrin ,Infectious and parasitic diseases ,RC109-216 - Abstract
Abstract Background In Brazil, members of the sand fly species complex Lutzomyia longipalpis transmit Leishmania infantum, a protist parasite that causes visceral leishmaniasis. Male Lu. longipalpis produce a sex pheromone that is attractive to both females and males. During a cluster randomised trial, to determine the combined effect of synthetic sex-aggregation pheromone and insecticide on Le. infantum transmission Lu. longipalpis had been continuously exposed to insecticide for 30 months. The objective of this study was to determine the effect of continuous exposure to the insecticides used in the trial on the susceptibility of Lu. longipalpis population. Methods During the trial the sand flies had been exposed to either lambda-cyhalothrin [pheromone + residual insecticide spray (PI)], deltamethrin [dog collars (DC)] or no insecticide [control (C)], for 30 months (November 2012 to April 2015). The insecticide treatment regime was kept in place for an additional 12 months (May 2015-April 2016) during this susceptibility study. Sand flies collected from the field were exposed to WHO insecticide-impregnated papers cyhalothrin (0.05%), deltamethrin (0.5%) and control (silicone oil) in a modified WHO insecticide exposure trial to determine their susceptibility. Results We collected 788 Lu. longipalpis using CDC-light traps in 31 municipalities across the three trial arms. Probit analysis showed that the knockdown times (KDTs) of Lu. longipalpis collected from the lambda-cyhalothrin exposed PI-arm [KDT50: 31.1 min, confidence interval (CI): 29.6–32.6 and KDT90: 44.2 min, CI: 42.1–46.7] were longer than the KDTs from the non-insecticide-treated C-arm (KDT50: 26.3 min, CI: 25.1–27.6 and KDT90: 38.2, CI: 36.5–40.2) (no-overlapping 95% CIs). KDTs of Lu. longipalpis collected from the deltamethrin exposed DC-arm had similar values (KDT50: 13.7 min, CI: 10.1–16.2 and KDT90: 26.7 min, CI: 21.8–30.6) to those for the C-arm (KDT50: 13.5 min; CI: 12.2–14.8 and KDT90: 23.2 min, CI: 21.4–25.4) (overlapping CIs). The wild-caught unexposed Lu. longipalpis (C-arm), took approximately twice as long to knock down as laboratory-colonised specimens for both insecticides. Conclusions Our study reveals slight changes in KDT, in sand flies after prolonged exposure to lambda-cyhalothrin in the presence of pheromone. These changes are not considered to have reached the reference levels indicative of resistance in sand flies suggesting that pheromone and insecticide treatment at the level indicated in this study do not constitute a significant risk of increased insecticide resistance. Prolonged exposure to deltamethrin in dog collars did not result in changes to KDT.
- Published
- 2019
- Full Text
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