22 results on '"ALEMDAR, ADEM"'
Search Results
2. Evaluation of SLC6A2 and CYP2D6 polymorphisms’ effects on atomoxetine treatment in attention deficit and hyperactivity disorder
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Kole, Ismail Hasan, Vural, Pınar, Yurdacan, Beste, Alemdar, Adem, and Mutlu, Caner
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- 2024
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3. Genotype and Phenotype Correlation of Patients with Osteogenesis Imperfecta
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Aliyeva, Lamiya, Ongen, Yasemin Denkboy, Eren, Erdal, Sarisozen, Mehmet B., Alemdar, Adem, Temel, Sehime G., and Sag, Sebnem Ozemri
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- 2024
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4. Germline landscape of BRCAs by 7-site collaborations as a BRCA consortium in Turkey
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Bisgin, Atil, Sag, Sebnem Ozemri, Dogan, Muhammet E., Yildirim, Mahmut S., Gumus, Aydeniz Aydin, Akkus, Nejmiye, Balasar, Ozgur, Durmaz, Ceren D., Eroz, Recep, Altiner, Sule, Alemdar, Adem, Aliyeva, Lamia, Boga, Ibrahim, Cam, Fethi S., Dogan, Berkcan, Esbah, Onur, Hanta, Abdullah, Mujde, Cem, Ornek, Cemre, Ozer, Sinem, Rencuzogullari, Cagla, Sonmezler, Ozge, Bozdogan, Sevcan Tug, Dundar, Munis, and Temel, Sehime G.
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- 2022
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5. Clinical and molecular evaluation of MEFV gene variants in the Turkish population: a study by the National Genetics Consortium
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Dundar, Munis, Fahrioglu, Umut, Yildiz, Saliha Handan, Bakir-Gungor, Burcu, Temel, Sehime Gulsun, Akin, Haluk, Artan, Sevilhan, Cora, Tulin, Sahin, Feride Iffet, Dursun, Ahmet, Sezer, Ozlem, Gurkan, Hakan, Erdogan, Murat, Gunduz, C. Nur Semerci, Bisgin, Atil, Ozdemir, Ozturk, Ulgenalp, Ayfer, Percin, E. Ferda, Yildirim, Malik Ejder, Tekes, Selahaddin, Bagis, Haydar, Yuce, Huseyin, Duman, Nilgun, Bozkurt, Gokay, Yararbas, Kanay, Yildirim, Mahmut Selman, Arman, Ahmet, Mihci, Ercan, Eraslan, Serpil, Altintas, Zuhal Mert, Aymelek, Huri Sema, Ruhi, Hatice Ilgin, Tatar, Abdulgani, Ergoren, Mahmut Cerkez, Cetin, G. Ozan, Altunoglu, Umut, Caglayan, Ahmet Okay, Yuksel, Berrin, Ozkul, Yusuf, Saatci, Cetin, Kenanoglu, Sercan, Karasu, Nilgun, Dundar, Bilge, Ozcelik, Firat, Demir, Mikail, Siniksaran, Betul Seyhan, Kulak, Hande, Kiranatlioglu, Kubra, Baysal, Kubra, Kazimli, Ulviyya, Akalin, Hilal, Dundar, Ayca, Boz, Mehmet, Bayram, Arslan, Subasioglu, Asli, Colak, Fatma Kurt, Karaduman, Neslihan, Gunes, Meltem Cerrah, Kandemir, Nefise, Aynekin, Busra, Emekli, Rabia, Sahin, Izem Olcay, Ozdemir, Sevda Yesim, Onal, Muge Gulcihan, Senel, Abdurrahman Soner, Poyrazoglu, Muammer Hakan, Kisaarslan, Ayse Nur Pac, Gursoy, Sebnem, Baskol, Mevlut, Calis, Mustafa, Demir, Huseyin, Zararsiz, Gozde Erturk, Erdogan, Mujgan Ozdemir, Elmas, Muhsin, Solak, Mustafa, Ulu, Memnune Sena, Thahir, Adam, Aydin, Zafer, Atasever, Umut, Sag, Sebnem Ozemri, Aliyeva, Lamiya, Alemdar, Adem, Dogan, Berkcan, Erguzeloglu, Cemre Ornek, Kaya, Niyazi, Ozkinay, Ferda, Cogulu, Ozgur, Durmaz, Asude, Onay, Huseyin, Karaca, Emin, Durmaz, Burak, Aykut, Ayca, Cilingir, Oguz, Aras, Beyhan Durak, Gokalp, Ebru Erzurumluoglu, Arslan, Serap, Temena, Arda, Haziyeva, Konul, Kocagil, Sinem, Bas, Hasan, Susam, Ezgi, Keklikci, Ali Riza, Sarac, Elif, Kocak, Nadir, Nergiz, Suleyman, Terzi, Yunus Kasim, Dincer, Selin Akad, Baskin, Esra Sidika, Genc, Gunes Cakmak, Bahadir, Oguzhan, Sanri, Aslihan, Yigit, Serbulent, Tozkir, Hilmi, Yalcintepe, Sinem, Ozkayin, Nese, Kiraz, Aslihan, Balta, Burhan, Gonen, Gizem Akinci, Kurt, E. Emre, Ceylan, Gulay Gulec, Ceylan, Ahmet Cevdet, Erten, Sukran, Bozdogan, Sevcan Tug, Boga, Ibrahim, Yilmaz, Mustafa, Silan, Fatma, Kocabey, Mehmet, Koc, Altug, Cankaya, Tufan, Bora, Elcin, Bozkaya, Ozlem Giray, Ercal, Derya, Ergun, Mehmet Ali, Ergun, Sezen Guntekin, Duman, Yesim Sidar, Beyazit, Serife Busra, Uzel, Veysiye Hulya, Em, Serda, Cevik, Muhammer Ozgur, Eroz, Recep, Demirtas, Mercan, Firat, Cem Koray, Kabayegit, Zehra Manav, Altan, Mustafa, Mardan, Lamiya, Sayar, Ceyhan, Tumer, Sait, Turkgenc, Burcu, Karakoyun, Hilal Keskin, Tunc, Betul, Kuru, Seda, Zamani, Aysegul, Geckinli, Bilgen Bilge, Ates, Esra Arslan, Clark, Ozden Altiok, Toylu, Asli, Coskun, Mert, Nur, Banu, Bilge, Ilmay, Bayramicli, Oya Uygur, Emmungil, Hakan, Komesli, Zeynep, Zeybel, Mujdat, Gurakan, Figen, Tasdemir, Mehmet, Kebudi, Rejin, Karabulut, Halil Gurhan, Tuncali, Timur, Kutlay, Nuket Yurur, Kahraman, Cigdem Yuce, Onder, Nerin Bahceciler, Beyitler, Ilke, Kavukcu, Salih, Tulay, Pinar, Tosun, Ozgur, Tuncel, Gulten, Mocan, Gamze, Kale, Hamdi, Uyguner, Zehra Oya, Acar, Aynur, Altinay, Mert, and Erdem, Levent
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- 2022
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6. Alzheimer Disease Associated Loci: APOE Single Nucleotide Polymorphisms in Marmara Region.
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Ismail, Aya Badeea, Dundar, Mehmet Sait, Erguzeloglu, Cemre Ornek, Ergoren, Mahmut Cerkez, Alemdar, Adem, Ozemri Sag, Sebnem, and Temel, Sehime Gulsun
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SINGLE nucleotide polymorphisms ,APOLIPOPROTEIN E ,ALZHEIMER'S disease ,LOCUS (Genetics) ,TURKS ,APOLIPOPROTEIN E4 - Abstract
Alzheimer's disease (AD) is a major global health challenge, especially among individuals aged 65 or older. According to population health studies, Turkey has the highest AD prevalence in the Middle East and Europe. To accurately determine the frequencies of common and rare APOE single nucleotide polymorphisms (SNPs) in the Turkish population residing in the Marmara Region, we conducted a retrospective study analyzing APOE variants in 588 individuals referred to the Bursa Uludag University Genetic Diseases Evaluation Center. Molecular genotyping, clinical exome sequencing, bioinformatics analysis, and statistical evaluation were employed to identify APOE polymorphisms and assess their distribution. The study revealed the frequencies of APOE alleles as follows: ε4 at 9.94%, ε2 at 9.18%, and ε3 at 80.68%. The gender-based analysis in our study uncovered a tendency for females to exhibit a higher prevalence of mutant genotypes across various SNPs. The most prevalent haplotype observed was ε3/ε3, while rare APOE SNPs were also identified. These findings align with global observations, underscoring the significance of genetic diversity and gender-specific characteristics in comprehending health disparities and formulating preventive strategies. [ABSTRACT FROM AUTHOR]
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- 2024
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7. A Multicenter Study of Genotype Variation/Demographic Patterns in 2475 Individuals Including 1444 Cases With Breast Cancer in Turkey
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Boga, Ibrahim, primary, Ozemri Sag, Sebnem, additional, Duman, Nilgun, additional, Ozdemir, Sevda Yesim, additional, Ergoren, Mahmut Cerkez, additional, Dalci, Kubilay, additional, Mujde, Cem, additional, Parsak, Cem Kaan, additional, Rencuzogullari, Cagla, additional, Sonmezler, Ozge, additional, Yalav, Orcun, additional, Alemdar, Adem, additional, Aliyeva, Lamiya, additional, Bozkurt, Ozlem, additional, Cetintas, Sibel, additional, Cubukcu, Erdem, additional, Deligonul, Adem, additional, Dogan, Berkcan, additional, Ornek Erguzeloglu, Cemre, additional, Evrensel, Turkkan, additional, Gokgoz, Sehsuvar, additional, Senol, Kazim, additional, Tolunay, Sahsine, additional, Akyurek, Esra, additional, Basgoz, Neslihan, additional, Gökçe, Nuriye, additional, Dundar, Bilge, additional, Ozturk, Figen, additional, Taskin, Duygu, additional, Demirtas, Mercan, additional, Cag, Murat, additional, Diker, Omer, additional, Olgun, Polat, additional, Tug Bozdogan, Sevcan, additional, Dundar, Munis, additional, Bisgin, Atil, additional, and Temel, Sehime Gulsun, additional
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- 2023
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8. A Multicenter Study of Genotype Variation/Demographic Patterns in 2475 Individuals Including 1444 Cases With Breast Cancer in Turkey
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Boga, Ibrahim, Ozemri Sag, Sebnem, Duman, Nilgun, Ozdemir, Sevda Yesim, Ergoren, Mahmut Cerkez, Dalci, Kubilay, Mujde, Cem, Parsak, Cem Kaan, Rencuzogullari, Cagla, Sonmezler, Ozge, Yalav, Orcun, Alemdar, Adem, Aliyeva, Lamiya, Bozkurt, Ozlem, Cetintas, Sibel, Cubukcu, Erdem, Deligonul, Adem, Dogan, Berkcan, Ornek Erguzeloglu, Cemre, Evrensel, Turkkan, Gokgoz, Sehsuvar, Senol, Kazim, Tolunay, Sahsine, Akyurek, Esra, Basgoz, Neslihan, Gökçe, Nuriye, Dundar, Bilge, Ozturk, Figen, Taskin, Duygu, Demirtas, Mercan, Cag, Murat, Diker, Omer, Olgun, Polat, Tug Bozdogan, Sevcan, Dundar, Munis, Bisgin, Atil, and Temel, Sehime Gulsun
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Original Article - Abstract
OBJECTIVE: Breast cancer (BC) is the most common cancer type in women and may be inherited, mostly in an autosomal dominant pattern. The clinical diagnosis of BC relies on the published diagnostic criteria, and analysis of two genes, BRCA1 and BRCA2, which are strongly associated with BC, are included in these criteria. The aim of this study was to compare BC index cases with non-BC individuals in terms of genotype and diagnostic features to investigate the genotype/demographic information association. MATERIALS AND METHODS: Mutational analyses for the BRCA1/BRCA2 genes was performed in 2475 individuals between 2013-2022 from collaborative centers across Turkey, of whom 1444 with BC were designated as index cases. RESULTS: Overall, mutations were identified in 17% (421/2475), while the percentage of mutation carriers in cases of BC was similar, 16.6% (239/1444). BRCA1/BRCA2 gene mutations were detected in 17.8% (131/737) of familial cases and 12% (78/549) of sporadic cases. Mutations in BRCA1 were found in 4.9%, whereas 12% were in BRCA2 (p
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- 2023
9. Contribution of genotypes in Prothrombin and Factor V Leiden to COVID‐19 and disease severity in patients at high risk for hereditary thrombophilia
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Kiraz, Aslıhan, primary, Sezer, Ozlem, additional, Alemdar, Adem, additional, Canbek, Sezin, additional, Duman, Nilgun, additional, Bisgin, Atıl, additional, Cora, Tulin, additional, Ruhi, Hatice Ilgın, additional, Ergoren, Mahmut Cerkez, additional, Geçkinli, Bilgen Bilge, additional, Sag, Sebnem Ozemri, additional, Gözden, Hilmi Erdem, additional, Oz, Ozlem, additional, Altıntaş, Zuhal Mert, additional, Yalcıntepe, Sinem, additional, Keskin, Adem, additional, Tak, Ayşegül Yabacı, additional, Paskal, Şeyma Aktaş, additional, Yürekli, Uğur Fahri, additional, Demirtas, Mercan, additional, Evren, Emine Unal, additional, Hanta, Abdullah, additional, Başdemirci, Müşerref, additional, Suer, Kaya, additional, Balta, Burhan, additional, Kocak, Nadir, additional, Karabulut, Halil Gürhan, additional, Cobanogulları, Havva, additional, Ateş, Esra Arslan, additional, Bozdoğan, Sevcan Tuğ, additional, Eker, Damla, additional, Ekinci, Sadiye, additional, Nergiz, Süleyman, additional, Tuncalı, Timur, additional, Yagbasan, Serap, additional, Alavanda, Ceren, additional, Kutlay, Nuket Yurur, additional, Evren, Hakan, additional, Erdoğan, Murat, additional, Altıner, Sule, additional, Sanlidag, Tamer, additional, Gonen, Gizem Akıncı, additional, Vicdan, Arzu, additional, Eras, Nazan, additional, Eker, Hatice Koçak, additional, Balasar, Ozgür, additional, Tuncel, Gulten, additional, Dundar, Munis, additional, Gurkan, Hakan, additional, and Temel, Sehime Gulsun, additional
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- 2023
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10. A multicenter study of genotype variation/demographic patterns in 2475 individuals inluding with 1444 cases with breast cancer in Turkey Short Title: BRCA profiling of breast-cancer patients in Turkey
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Bisgin, Atil, primary, Sag, Sebnem Ozemri, additional, Duman, Nilgun, additional, Ozdemir, Sevda Yesim, additional, Ergoren, Mahmut Cerkez, additional, Boga, Ibrahim, additional, Dalci, Kubilay, additional, Hanta, Abdullah, additional, Mujde, Cem, additional, Parsak, Cem Kaan, additional, Rencuzogullari, Çagla, additional, Sonmezler, Ozge, additional, Yalav, Orcun, additional, Alemdar, Adem, additional, Aliyeva, Lamiya, additional, Bozkurt, Ozlem, additional, Cetintas, Sibel, additional, Cubukcu, Erdem, additional, Deligonul, Adem, additional, Dogan, Berkcan, additional, Erguzeloglu, Cemre Ornek, additional, Evrensel, Turkkan, additional, Gokgoz, Sehsuvar, additional, Tolunay, Sahsine, additional, Akyurek, Esra, additional, Basgoz, Neslihan, additional, Coşkun, Nuriye, additional, Dundar, Bilge, additional, Ozturk, Figen, additional, Taskin, Duygu, additional, Demirtas, Mercan, additional, Cag, Murat, additional, Diker, Omer, additional, Olgun, Polat, additional, Bozdogan, Sevcan, additional, Dundar, Munis, additional, and Temel, Sehime Gulsun, additional
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- 2022
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11. Analysis of ACE2 and TMPRSS2 coding variants as a risk factor for SARS‐CoV‐2 from 946 whole‐exome sequencing data in the Turkish population
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Duman, Nilgun, primary, Tuncel, Gulten, additional, Bisgin, Atil, additional, Bozdogan, Sevcan Tug, additional, Sag, Sebnem Ozemri, additional, Gul, Seref, additional, Kiraz, Aslihan, additional, Balta, Burhan, additional, Erdogan, Murat, additional, Uyanik, Bulent, additional, Canbek, Sezin, additional, Ata, Pinar, additional, Geckinli, Bilgen Bilge, additional, Arslan Ates, Esra, additional, Alavanda, Ceren, additional, Yesim Ozdemir, Sevda, additional, Sezer, Ozlem, additional, Ozgon, Gulay Oner, additional, Gurkan, Hakan, additional, Guler, Kubra, additional, Boga, Ibrahim, additional, Kaya, Niyazi, additional, Alemdar, Adem, additional, Sayan, Murat, additional, Dundar, Munis, additional, Ergoren, Mahmut Cerkez, additional, and Temel, Sehime Gulsun, additional
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- 2022
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12. Clinical and molecular evaluation of MEFV gene variants in the Turkish population: a study by the National Genetics Consortium
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ERTEN, ŞÜKRAN, DÜNDAR, MUNİS, Altinay, Mert, Bakir-Gungor, Burcu, TEMEL, ŞEHİME GÜLSÜN, AKIN, HALUK, ARTAN, SEVİLHAN, Acar, Aynur, Cora, Tulin, ŞAHİN, FERİDE İFFET, DURSUN, AHMET, Sezer, Ozlem, GÜRKAN, HAKAN, Erdogan, Murat, Kebudi, Rejin, ÇİLİNGİR, OĞUZ, AYKUT, AYÇA, Durmaz, Burak, EMMUNGİL, HAKAN, KARACA, EMİN, Emekli, Rabia, Gonen, Gizem Akinci, Onay, Huseyin, DURMAZ, ASUDE, Balta, Burhan, Aynekin, Busra, KANDEMİR, NEFİSE, Kiraz, Aslihan, ÇOĞULU, MUHSİN ÖZGÜR, Gunes, Meltem Cerrah, KARADUMAN, NESLİHAN, Ozkayin, Nese, ÖZKINAY, FERİŞTAH FERDA, YALÇINTEPE, SİNEM, ÇOLAK, Fatma, SUBAŞIOĞLU, Aslı, Haziyeva, Konul, Bayramicli, Oya Uygur, Bilge, Ilmay, Kaya, Niyazi, Bayram, Arslan, Erguzeloglu, Cemre Ornek, KAVUKÇU, SALİH, DOĞAN, BERKCAN, Tuncel, Gulten, Mocan, Gamze, Kale, Hamdi, Gurakan, Figen, Uyguner, Zehra Oya, Tunc, Betul, Kuru, Seda, Boz, Mehmet, Dundar, Ayca, AKALIN, HİLAL, KAZIMLI, ULVIYYA, Zeybel, Mujdat, BAYSAL, KÜBRA, Zamani, Aysegul, GEÇKİNLİ, BİLGEN BİLGE, Uzel, Veysiye Hulya, DURAK ARAS, BEYHAN, Kiranatlioglu, Kubra, Ates, Esra Arslan, KULAK ABAY, HANDE, COŞKUN, MERT, EM, SERDA, ALTIOK CLARK, ÖZDEN, TOYLU, ASLI, TOZKIR, HİLMİ, Komesli, Zeynep, KOCAGİL, SİNEM, ÇEVİK, MUHAMMER ÖZGÜR, Eroz, Recep, Demirtas, Mercan, FIRAT, CEM KORAY, ERGÜN, MEHMET ALİ, YÜCE KAHRAMAN, Çiğdem, Yigit, Serbulent, Sanri, Aslihan, Siniksaran, Betul Seyhan, DEMİR, MİKAİL, ÖZÇELİK, FIRAT, Dundar, Bilge, BAŞ, HASAN, SUSAM, EZGİ, Karakoyun, Hilal Keskin, KARASU, NİLGÜN, Kenanoglu, Sercan, SAATÇİ, ÇETİN, ÖZKUL, YUSUF, Temena, Arda, Yuksel, Berrin, ÇAĞLAYAN, AHMET OKAY, BAHADIR, Oğuzhan, Genc, Gunes Cakmak, KEKLİKCİ, ALİ RIZA, Altunoglu, Umut, Sarac, Elif, Baskin, Esra Sidika, TOSUN, ÖZGÜR, Tulay, Pinar, Kabayegit, Zehra Manav, Altan, Mustafa, Mardan, Lamiya, Sayar, Ceyhan, ERZURUMLUOĞLU GÖKALP, EBRU, ÇETİN, GÖKHAN OZAN, Turkgenc, Burcu, Arslan, Serap, Tumer, Sait, NUR, BANU, Ergoren, Mahmut Cerkez, Onder, Nerin Bahceciler, KOÇAK, NADİR, Tasdemir, Mehmet, NERGİZ, SÜLEYMAN, Beyitler, Ilke, KUTLAY, NÜKET, TUNCALI, TİMUR, BEYAZIT, ŞERİFE BÜŞRA, SEMERCİ GÜNDÜZ, CAVİDAN NUR, SIDAR DUMAN, YEŞİM, Ergun, Sezen Guntekin, Ercal, Derya, ALEMDAR, ADEM, ALIYEVA, LAMIYA, ÖZEMRİ SAĞ, ŞEBNEM, Atasever, Umut, AYDIN, ZAFER, Thahir, Adam, TATAR, Abdulgani, ILGIN RUHİ, HATİCE, TERZİ, YUNUS KASIM, BİŞGİN, ATIL, Dincer, Selin Akad, ÖZDEMİR, ÖZTÜRK, ÜLGENALP, AYFER, PERÇİN, FERDA EMRİYE, YILDIRIM, MALİK EJDER, Ulu, Memnune Sena, Solak, Mustafa, Elmas, Muhsin, ÖZDEMİR ERDOĞAN, MÜJGAN, Zararsiz, Gozde Erturk, DEMİR, HÜSEYİN, ÇALIŞ, MUSTAFA, BAŞKOL, MEVLÜT, Aymelek, Huri Sema, ALTINTAŞ, ZUHAL, Eraslan, Serpil, KURT, EMİN EMRE, Erdem, Levent, FAHRİOGLU, UMUT, GÜLEÇ CEYLAN, GÜLAY, Sahin, Izem Olcay, CEYLAN, AHMET CEVDET, TUĞ BOZDOĞAN, SEVCAN, BOĞA, İBRAHİM, Yildiz, Saliha Handan, KARABULUT, HALİL GÜRHAN, YILMAZ, MUSTAFA, TEKEŞ, SELAHADDİN, SILAN, FATMA, KOCABEY, MEHMET, KOÇ, ALTUĞ, ÇANKAYA, TUFAN, BAĞIŞ, HAYDAR, BORA, ELÇİN, GİRAY BOZKAYA, ÖZLEM, ÖZDEMİR, Sevda Yeşim, ÖNAL, MÜGE GÜLCİHAN, ŞENEL, ABDURRAHMAN SONER, POYRAZOĞLU, MUAMMER HAKAN, PAÇ KISAARSLAN, AYŞENUR, GÜRSOY, ŞEBNEM, YÜCE, HÜSEYİN, DUMAN, NİLGÜN, BOZKURT, GÖKAY, Yararbas, Kanay, YILDIRIM, MAHMUT SELMAN, ARMAN, AHMET, MIHÇI, ERCAN, Dicle Üniversitesi, Tıp Fakültesi, Dahili Tıp Bilimleri Bölümü, Tıbbi Genetik Ana Bilim Dalı, Tekeş, Selahaddin, Üzel, Veysiye Hülya, Em, Serda, and DÜNDAR M., FAHRİOGLU U., Yildiz S. H., Bakir-Gungor B., TEMEL Ş. G., AKIN H., ARTAN S., Cora T., ŞAHİN F. İ., DURSUN A., et al.
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GENETİK VE KALITIM ,Genotype ,Turkey ,PROTEIN ASC ,MEFV ,Life Sciences (LIFE) ,Molecular Biology and Genetics ,KAPPA-B ,Genotype-phenotype correlations ,Sağlık Bilimleri ,Familial Mediterranean fever ,National Genetics Consortium ,AUTOINFLAMMATION ,ACTIVATION ,Tıbbi Genetik ,Yaşam Bilimleri ,Health Sciences ,Genetics ,Humans ,PYRIN ,GENETICS & HEREDITY ,Molecular Biology ,Moleküler Biyoloji ve Genetik ,Genetics (clinical) ,ASSOCIATIONS ,Internal Medicine Sciences ,MUTATIONS ,Temel Bilimler ,Life Sciences ,General Medicine ,Dahili Tıp Bilimleri ,Tıp ,PREVALENCE ,MOLECULAR BIOLOGY & GENETICS ,Genetics, Population ,Phenotype ,Yaşam Bilimleri (LIFE) ,AMYLOIDOSIS ,Mutation ,Medicine ,Natural Sciences ,Medical Genetics - Abstract
© 2021, The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.Familial Mediterranean fever (FMF) is a monogenic autoinflammatory disorder with recurrent fever, abdominal pain, serositis, articular manifestations, erysipelas-like erythema, and renal complications as its main features. Caused by the mutations in the MEditerranean FeVer (MEFV) gene, it mainly affects people of Mediterranean descent with a higher incidence in the Turkish, Jewish, Arabic, and Armenian populations. As our understanding of FMF improves, it becomes clearer that we are facing with a more complex picture of FMF with respect to its pathogenesis, penetrance, variant type (gain-of-function vs. loss-of-function), and inheritance. In this study, MEFV gene analysis results and clinical findings of 27,504 patients from 35 universities and institutions in Turkey and Northern Cyprus are combined in an effort to provide a better insight into the genotype-phenotype correlation and how a specific variant contributes to certain clinical findings in FMF patients. Our results may help better understand this complex disease and how the genotype may sometimes contribute to phenotype. Unlike many studies in the literature, our study investigated a broader symptomatic spectrum and the relationship between the genotype and phenotype data. In this sense, we aimed to guide all clinicians and academicians who work in this field to better establish a comprehensive data set for the patients. One of the biggest messages of our study is that lack of uniformity in some clinical and demographic data of participants may become an obstacle in approaching FMF patients and understanding this complex disease.
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- 2022
13. A study of Helminth Parasites of Bitterling Fish, Rhodeus Amarus (Pallas, 1782) (Teleostei: Cyprinidae) ın Susurluk Stream (Balikesir): First record of Paradiplozoon homoion ın Rodeus amarus from Turkey and new record for Helminth Parasites from Susurluk Stream new record for Helminth Parasites from Susurluk Stream
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Aydoğdu, Nurten, Alemdar, Adem, Koç, Hatice Torcu, Erdoğan, Zeliha, and Fen Bilimleri Enstitüsü
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New Record ,Acı Balık ,Fen ,Susurluk Stream ,Science ,Bitterling ,Ectoparasites ,Susurluk Çayı ,Yeni Kayıt ,Susurluk çayı,Acı balık,ekto parazit ,Susurluk Stream,Bitterling,ectoparasites,new record ,Ekto Parazit - Abstract
Aydoğdu, Nurten (Balikesir Author), Bu çalışmada; Rhodeus amarus’un Ekim 2018 – Aralık 2018 tarihleri arasındaki helmint faunasının belirlenmesi amaçlanmıştır. Çalışma sonucunda; 51 adet R. amarus bireyinin 18’nin bir ya da daha fazla parazit türü ile enfekte olduğu bulunmuştur. Konak balıkta toplam 3 adet ektoparazitik helmint türü tanımlanmış olup, üç farklı türe ait 34 parazit bireyine rastlanılmıştır. Bu parazitlerden Monogenea’ dan Dactylogyrus bicornis Malewitzkaja, 1941 (%17,6; 2 parazit/balık); Paradiplozoon homoion (Bychowsky and Nagibina, 1959) (%11,7; 1,3 parazit/balık) konak balığın solungaçlarında, Digenea’ dan Clinostomum complanatum metaserkeri (Rhudolphi, 819) (%13,7; 1,1 parazit/balık) konak balığın solungaç boşluğunda kaydedilebilmiştir. Bu çalışmada, D. bicornis 9 balıkta toplam 18 adet bulunmuş olup, en yaygın parazit türü olarak kaydedilmiştir. Parazit türlerine ait enfeksiyon yüzdeleri ile minimum, maksimum ve ortalama enfeksiyon yoğunlukları değerlendirilmiştir. Diğer taraftan, bu çalışma Susurluk Havzası balık faunasında yer alan R. amarus’un helmint parazitleri üzerine yapılan ilk çalışmadır. Saptanan türlerden, P. homoion ise Türkiye’deki acı balıklarda ilk kez bu çalışma ile bildirilmiştir. Ayrıca bu çalışmada konak balıkta kaydedilen türlerden her biri Susurluk Çayı için yeni kayıt olup, Anadolu’daki dağılımlarına yeni bir lokalite olarak eklenmiştir., In this study; it was aimed to determine the helminth fauna of Rhodeus amarus in Susurluk Stream between October 2018 and December 2018. In result of this study; of fifty-one individuals of R. amarus, eighteen were found to be infected with one or more parasite species. A total of 3 ectoparasitic helminth species were identified in host fish and 34 parasites belonging to three different species were encountered. From these parasites; Dactylogyrus bicornis Malewitzkaja, 1941 ( Monogenea) (17.6%; 2 parasites / fish); Paradiplozoon homoion (Bychowsky and Nagibina, 1959) (Monogenea) (11.7%; 1.3 parasites / fish) in the gills of the host fish, Clinostomum complanatum metaserkeri (Rhudolphi, 819) (Digenea) (13.7%; 1.1 parasites / fish) of the host fish was recorded in the gill cavity. In this study, D. bicornis was found to be the most common parasite species as it was recorded in nine of a total of 18 fishes. Infection percentages of parasite species and minimum, maximum and average infection densities were evaluated. On the other hand, this study is the first study on the helminth parasites of R. amarus in the fish fauna of the Susurluk stream. P. homoion is first record for R. amarus in Turkey. In addition, the species recorded in the host fish in this study are the new record for Susurluk Stream and have been added to their distributions in Anatolia as a new locality.
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- 2020
14. DPYDc.1905 + 1G>A Promotes Fluoropyrimidine-Induced Anemia, a Prognostic Factor in Disease-Free Survival, in Colorectal Cancer
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Deligonul, Adem, primary, Aksoy, Secil, additional, Tezcan, Gulcin, additional, Tunca, Berrin, additional, Kanat, Ozkan, additional, Cubukcu, Erdem, additional, Yilmazlar, Tuncay, additional, Ozturk, Ersin, additional, Egeli, Unal, additional, Cecener, Gulsah, additional, Alemdar, Adem, additional, and Evrensel, Turkkan, additional
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- 2021
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15. Ailesel Akdeniz Ateşi Hastalarında MEFV Gen Mutasyonunun Sıklığı ve Dağılımı: Tek Merkez Deneyimi
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ÖZEMRİ SAĞ, Şebnem, primary, ALEMDAR, Adem, additional, ALİYEVA, Lamiya, additional, KAYA, Niyazi, additional, and TEMEL, Şehime G, additional
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- 2021
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16. Susurluk Çayı (Balıkesir)’ndaki Acı Balık, Rhodeus amarus (Pallas, 1782) (Teleostei: Cyprinidae)’un Helmint Parazitleri Üzerine Bir Araştırma: Acı Balık’ta Paradiplozoon homoion’ un Türkiye’ de İlk Kaydı ve Helmint Parazitlerin Her Biri İçin Yeni Lokalite Kaydı
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AYDOĞDU, Nurten, primary, ALEMDAR, Adem, additional, TORCU KOÇ, Hatice, additional, and ERDOĞAN, Zeliha, additional
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- 2020
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17. DPYD c.1905 + 1G>A Promotes Fluoropyrimidine-Induced Anemia, a Prognostic Factor in Disease-Free Survival, in Colorectal Cancer.
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Deligonul, Adem, Aksoy, Secil, Tezcan, Gulcin, Tunca, Berrin, Kanat, Ozkan, Cubukcu, Erdem, Yilmazlar, Tuncay, Ozturk, Ersin, Egeli, Unal, Cecener, Gulsah, Alemdar, Adem, and Evrensel, Turkkan
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- 2021
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18. FREQUENCY AND DISTRIBUTION OF MEFV GENE MUTATION IN FAMILIAL MEDITERRANEAN FEVER PATIENTS: A SINGLE CENTER EXPERIENCE.
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ÖZEMRİ SAĞ, Şebnem, ALEMDAR, Adem, ALİYEVA, Lamiya, KAYA, Niyazi, and TEMEL, Şehime Gülsün
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FAMILIAL Mediterranean fever , *PERIODIC diseases , *FEVER , *GENES - Abstract
Objective We aimed to evaluate frequency and distribution MEFV gene mutation variants in patients with presumptive diagnosis of Familial Mediterranean Fever (FMF). Material and Methods Patients who had undergone FMF targeted mutation analysis between September 2018 and September 2019 were retrospectively analyzed. Twenty-six distinct MEFV gene mutation variants were studied. Demographic and clinical data of study participants were collected from patient charts and hospital electronic database system. Results Out of 910 referred patients, 350 (38.5%) were found to have a positive FMF mutation. In total, we detected 41 different genotypes and 26 different mutations in the MEFV gene. The most common mutation and genotype were M694V and heterozygous M694V, respectively. Two hundred and seventy-six patients (78.9%) had a single mutation. Seventy-four patients had compound heterozygous mutation (21.1%). The most common compound heterozygous mutations were P369S/R408Q (23.3%). Five founder mutations constituted the seventy-five percent of the all mutations detected. Rare mutations that generally not examined in other studies were present in 15 patients (%4.2) in the form of two different compound heterozygous genotype. The total allele frequency of these rare mutations was 5%. Conclusion In this study, we examined an extended panel of MEFV mutations and detected more complex genotypes than most of the previous studies conducted in Turkish patients in the literature. [ABSTRACT FROM AUTHOR]
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- 2021
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19. Rubus sanctus Schreb. root extract alters the MicroRNA expression and inhibits tumor activities of colorectal cancer cell lines
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Tunca, Berrin, primary, Alemdar, Adem, additional, Malyer, Hulusi, additional, and Sahin, Saliha, additional
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- 2018
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20. Olea europaea yaprağı, rubus fruticosus ve nigella CV. özütlerinin kolon kanseri hücre hatlarında mikrorna ekspresyon seviyeleri üzerine etkilerinin araştırılması
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Alemdar, Adem, Tunca, Berrin, Tıbbi Biyoloji Ana Bilim Dalı, and Uludağ Üniversitesi/Sağlık Bilimleri Enstitüsü/Tıbbi Biyoloji Anabilim Dalı.
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Olea europeae ,Kolorektal kanser ,Micro RNA ,Medical oncology ,Olea europaea L ,Rubus fruticosus ,Colonic neoplasms ,Nigella sativa L ,MikroRNA ,Plants-medicinal ,Migrasyon ,Colorectal cancer ,Tıbbi Biyoloji ,Plant extract ,Neoplasms ,Nigella sativa ,Gene expression ,Rubus ,Cell proliferation ,Migration ,Medical Biology ,Hücre çoğalması - Abstract
Kolorektal kanser, dünyada en yaygın görülen kanserlerden biridir. Son 30 yıldagelişen cerrahi ve görüntüleme tekniklerine rağmen kemoterapatiklerin tedavide yeterinceetkin sonuçlar veremediği görülmektedir. Biyoaktif ajanlar olarak adlandırılan bitkiözütleri, son yıllarda yeni tedavilerin geliştirilmesi açısından yoğun olarakaraştırılmaktadır. Epigenetik mekanizmalar üzerinden etkili olduğu anlaşılan bitkiselözütlerin yeni kanser tedavi modellerinin geliştirilmesinde faydalı olacağıdüşünülmektedir. Tüm bu sebepler ile mevcut tez çalışmasında kolorektal kanserhücrelerinde bitkisel özütlerin etkilerinin, önemli bir epigenetik mekanizma olanmikroRNA (miRNA) ekspresyon seviyelerindeki değişimler ile değerlendirilmesiamaçlanmıştır.Gerçekleştirilen çalışmada, Nigella sativa (çörekotu) tohum özütü (NTE), Oleaeuropeae (zeytin) yaprağı özütü (OLE) ve Rubus fruticosus (böğürtlen) kök özütü(RKE)'nün iki kolorektal kanser hücre hattındaki (HT-29 ve LoVo) anti kanser etkisi hücreproliferasyonu ve invazyonu açısından araştırıldı ve olası anti kanser etkinin molekülermekanizması miRNA ekspresyon seviyesinde çalışılarak epigenetik olarak değerlendirildi.WST-1 analizi sonuçlarına göre değerlendirilen bitki özütlerinin hücre proliferasyonunuanlamlı düzeyde azaltıcı etkisinin (p
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- 2016
21. Rubus sanctus Schreb. Root Extract Alters the MicroRNA Expression and Inhibits Tumor Activities of Colorectal Cancer Cell Lines.
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Alemdar, Adem, Tunca, Berrin, Malyer, Hulusi, and Sahin, Saliha
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CELL lines , *COLORECTAL cancer , *RUBUS , *CANCER cells , *MICRORNA - Abstract
Background: Colorectal cancer (CRC) is one of the most common cancers in the world. Although surgical and screening techniques have vastly improved in the last 30 years, chemotherapeutics have not advanced sufficiently for successful treatment. Objective: The aim of this study is to investigate the microRNA (miRNA) expression changes and anticancer agent potential of Rubus Sanctus Schreb. root extract (RRE) on LoVo and HT-29 colorectal adenocarcinoma cell lines. Materials and Methods: LoVo and HT-29 CRC cell lines treated with different concentrations of RRE to find growth inhibitory effect with WST-1 assay. Fifty percent growth inhibition and 25% growth inhibition concentrations further evaluated with annexin V, total caspase, cell cycle, and migration assays. Real-time polymerase chain reaction was used to investigate the expression differences in miRNA after extract treatment. Results: Cell proliferation was reduced 77.98% in HT-29 cells after RRE treatment (P < 0.05). In the cell invasion analysis, RRE reduced invasion in both cell lines up to 75.56% (P < 0.05). In addition, RRE induced apoptosis in up to 98% of a cell population (P < 0.05). Similarly, pan-caspase activity increased to 97.6% and 87.2% in LoVo and HT-29 cell lines, respectively (P < 0.0001). After extract treatment, among the nine miRNAs evaluated, only miR-140 expression was significantly increased in both cell lines after RRE treatment (P < 0.05). Conclusion: Our data show for the first time that RRE has the capability to inhibit CRC cell proliferation and invasion and alter epigenetic mechanisms. Although further studies should be conducted on this topic, RRE is thought to be a potential candidate for the future studies regarding new therapy options. [ABSTRACT FROM AUTHOR]
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- 2018
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22. Association of PALB2 sequence variants with the risk of early-onset breast cancer in patients from Turkey
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G. Cecener, Güney Eskiler, Gamze, U. Egeli, B. Tunca, A. Alemdar, S. Gokgoz, I. Tasdelen, Cecener, G, Eskiler, GG, Egeli, U, Tunca, B, Alemdar, A, Gokgoz, S, Tasdelen, I, Sakarya Üniversitesi/Tıp Fakültesi/Temel Tıp Bilimleri Bölümü, Güney Eskiler, Gamze, Uludağ Üniversitesi/Tıp Fakültesi/Tıbbi Biyoloji Anabilim Dalı., Uludağ Üniversitesi/Tıp Fakültesi/Genel Cerrahi Anabilim Dalı., Çeçener, Gülşah, Eskiler, Gamze Güney, Egeli, Ünal, Tunca, Berrin, Alemdar, Adem, Gökgöz, Şehsuvar, Taşdelen, İsmet, AAP-9988-2020, AAB-6011-2022, ABI-6078-2020, HIZ-7332-2022, and AAH-1420-2021
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0301 basic medicine ,Identification ,Familial Breast Cancer ,Partner and Localizer of BRCA2 ,Breast Neoplasms ,Amino acid substitution ,Turkey ,Biochemistry & molecular biology ,Intron ,DNA Mutational Analysis ,Penetrance ,Early-onset breast cancer ,Procedures ,Gene ,Germline ,Turkish population ,Heteroduplex analysis ,Families ,Cancer risk ,Exon ,Breast cancer ,0302 clinical medicine ,Germline mutation ,Missense mutation ,Tumor suppressor gene ,Age of Onset ,skin and connective tissue diseases ,Genetics ,BRCA2 mutations ,education.field_of_study ,Susceptibility alleles ,BRCA1 Protein ,Nuclear Proteins ,General Medicine ,Middle Aged ,030220 oncology & carcinogenesis ,Female ,PALB2 gene ,Fanconi Anemia Complementation Group N Protein ,Human ,Adult ,Mutation rate ,PALB2 ,Population ,Nuclear protein ,DNA sequence ,Breast tumor ,Major clinical study ,Caucasian ,Biology ,Polymorphism, Single Nucleotide ,Article ,White People ,Gene product ,Young Adult ,03 medical and health sciences ,And/or ovarian-cancer ,medicine ,Humans ,Women ,Genetic Predisposition to Disease ,Germline mutations ,education ,PALB2 protein, human ,Molecular Biology ,Oncogene ,Genetic Association Studies ,Germ-Line Mutation ,Truncating mutations ,BRCA1 protein, human ,Genetic association study ,Moderate-penetrance genes ,BRCA2 Protein ,Genetic predisposition ,Tumor Suppressor Proteins ,Sequence Analysis, DNA ,Mutational analysis ,medicine.disease ,Tumor suppressor protein ,Relatives ,BRCA2 protein, human ,Single nucleotide polymorphism ,Onset age ,030104 developmental biology ,Fanconi-anemia ,Genetic association ,Turk (people) ,Genetic variability ,Controlled study ,European continental ancestry group - Abstract
The PALB2 gene, has been accepted as a moderate-penetrance gene associated with breast cancer susceptibility and this gene product is involved in the DNA damage repair pathway via co-localization with BRCA2. Germline PALB2 mutations are associated with an increased breast cancer risk. However, the prevalence of the diverse types of PALB2 variants depend on the population. Thus, the aim of the present study was to determine, for the first time, the prevalence of PALB2 variants in a Turkish population of BRCA1/BRCA2-negative early-onset patients with breast cancer. In total, 223 Turkish patients with BRCA1/BRCA2 negative early-onset breast cancer and 60 unaffected women were included in the study. All the coding exons and intron/exon boundaries of PALB2 were subjected to mutational analysis by heteroduplex analysis (HDA) and DNA sequencing. Eighteen PALB2 variants were found in breast cancer patients within the Turkish population. Three variants (c.271G>A, c.404C>A and c.2981T>A) have not been previously reported. In addition, nine intronic variants were described, and this study is the first to describe the c.1685-44T>A intronic variant. The prevalence of possible pathogenic PALB2 variants was found to be 4.03 % in BRCA1/2-negative Turkish patients with early-onset breast cancer. Different variants of PALB2 have been reported in the literature, and the prevalence of these variants could different for each population. This is the first study to investigate the prevalence of PALB2 variants in Turkish patients with early-onset breast cancer. British Association for Psychopharmacology
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- 2016
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