80 results on '"Alexey G. Ryazanov"'
Search Results
2. Homozygous knockout of eEF2K alleviates cognitive deficits in APP/PS1 Alzheimer’s disease model mice independent of brain amyloid β pathology
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Nicole P. Kasica, Xueyan Zhou, Hannah M. Jester, Caroline E. Holland, Alexey G. Ryazanov, Tom E. Forshaw, Cristina M. Furdui, and Tao Ma
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Alzheimer’s disease ,protein synthesis ,eEF2K ,synapses ,memory ,Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Abstract
Maintenance of memory and synaptic plasticity depends on de novo protein synthesis, and accumulating evidence implicates a role of dysregulated mRNA translation in cognitive impairments associated with Alzheimer’s disease (AD). Accumulating evidence demonstrates hyper-phosphorylation of translation factor eukaryotic elongation factor 2 (eEF2) in the hippocampi of human AD patients as well as transgenic AD model mice. Phosphorylation of eEF2 (at the Thr 56 site) by its only known kinase, eEF2K, leads to inhibition of general protein synthesis. A recent study suggests that amyloid β (Aβ)-induced neurotoxicity could be associated with an interaction between eEF2 phosphorylation and the transcription factor nuclear erythroid 2-related factor (NRF2)-mediated antioxidant response. In this brief communication, we report that global homozygous knockout of the eEF2K gene alleviates deficits of long-term recognition and spatial learning in a mouse model of AD (APP/PS1). Moreover, eEF2K knockout does not alter brain Aβ pathology in APP/PS1 mice. The hippocampal NRF2 antioxidant response in the APP/PS1 mice, measured by expression levels of nicotinamide adenine dinucleotide plus hydrogen (NADPH) quinone oxidoreductase 1 (NQO1) and heme oxygenase-1 (HO-1), is ameliorated by suppression of eEF2K signaling. Together, the findings may contribute to our understanding of the molecular mechanisms underlying AD pathogenesis, indicating that suppression of eEF2K activity could be a beneficial therapeutic option for this devastating neurodegenerative disease.
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- 2022
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3. An atlas of substrate specificities for the human serine/threonine kinome
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Jared L. Johnson, Tomer M. Yaron, Emily M. Huntsman, Alexander Kerelsky, Junho Song, Amit Regev, Ting-Yu Lin, Katarina Liberatore, Daniel M. Cizin, Benjamin M. Cohen, Neil Vasan, Yilun Ma, Konstantin Krismer, Jaylissa Torres Robles, Bert van de Kooij, Anne E. van Vlimmeren, Nicole Andrée-Busch, Norbert F. Käufer, Maxim V. Dorovkov, Alexey G. Ryazanov, Yuichiro Takagi, Edward R. Kastenhuber, Marcus D. Goncalves, Benjamin D. Hopkins, Olivier Elemento, Dylan J. Taatjes, Alexandre Maucuer, Akio Yamashita, Alexei Degterev, Mohamed Uduman, Jingyi Lu, Sean D. Landry, Bin Zhang, Ian Cossentino, Rune Linding, John Blenis, Peter V. Hornbeck, Benjamin E. Turk, Michael B. Yaffe, and Lewis C. Cantley
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Multidisciplinary - Abstract
Protein phosphorylation is one of the most widespread post-translational modifications in biology1,2. With advances in mass-spectrometry-based phosphoproteomics, 90,000 sites of serine and threonine phosphorylation have so far been identified, and several thousand have been associated with human diseases and biological processes3,4. For the vast majority of phosphorylation events, it is not yet known which of the more than 300 protein serine/threonine (Ser/Thr) kinases encoded in the human genome are responsible3. Here we used synthetic peptide libraries to profile the substrate sequence specificity of 303 Ser/Thr kinases, comprising more than 84% of those predicted to be active in humans. Viewed in its entirety, the substrate specificity of the kinome was substantially more diverse than expected and was driven extensively by negative selectivity. We used our kinome-wide dataset to computationally annotate and identify the kinases capable of phosphorylating every reported phosphorylation site in the human Ser/Thr phosphoproteome. For the small minority of phosphosites for which the putative protein kinases involved have been previously reported, our predictions were in excellent agreement. When this approach was applied to examine the signalling response of tissues and cell lines to hormones, growth factors, targeted inhibitors and environmental or genetic perturbations, it revealed unexpected insights into pathway complexity and compensation. Overall, these studies reveal the intrinsic substrate specificity of the human Ser/Thr kinome, illuminate cellular signalling responses and provide a resource to link phosphorylation events to biological pathways.
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- 2023
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4. Agonists in the Extended Conformation Stabilize the Active State of β-Adrenoceptors
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Alexander V, Efimov, Olga V, Meshcheryakova, and Alexey G, Ryazanov
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Models, Molecular ,Oxygen ,Nitrogen ,Protein Conformation ,Biophysics ,General Medicine ,Adrenergic beta-Agonists ,Geriatrics and Gerontology ,Biochemistry ,Biochemistry, Genetics and Molecular Biology (miscellaneous) ,Carbon ,Protein Structure, Secondary ,Receptors, Adrenergic - Abstract
Abstract In this study, we conducted a comparative analysis of the structure of agonists and antagonists of transmembrane (TM) β-adrenoceptors (β-ARs) and their interactions with the β-ARs and proposed the mechanism of receptor activation. A characteristic feature of agonist and antagonist molecules is the presence of a hydrophobic head (most often, one or two aromatic rings) and a tail with a positively charged amino group. All β-adrenergic agonists have two carbon atoms between the aromatic ring of the head and the nitrogen atom of the amino group. In antagonist molecules, this fragment can be either reduced or increased to four atoms due to the additional carbon and oxygen atoms. The agonist head, as a rule, has two H-bond donors or acceptors in the para- and meta-positions of the aromatic rings, while in the antagonist heads, these donors/acceptors are absent or located in other positions. Analysis of known three-dimensional structures of β-AR complexes with agonists showed that the agonist head forms two H-bonds with the TM5 helix, and the tail forms an ionic bond with the D3.32 residue of the TM3 helix and one or two H-bonds with the TM7 helix. The tail of the antagonist can form similar bonds, but the interaction between the head and the TM5 helix is much weaker. As a result of these interactions, the agonist molecule acquires an extended “strained string” conformation, in contrast to the antagonist molecule, which has a longer, bended, and flexible tail. The “strained string” of the agonist interacts with the TM6 helix (primarily with the W6.48 residue) and turns it, which leads to the opening of the G protein-binding site on the intracellular side of the receptor, while flexible and larger antagonist molecules do not have the same effect on the receptor.
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- 2022
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5. A global atlas of substrate specificities for the human serine/threonine kinome
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Jared L. Johnson, Tomer M. Yaron, Emily M. Huntsman, Alexander Kerelsky, Junho Song, Amit Regev, Ting-Yu Lin, Katarina Liberatore, Daniel M. Cizin, Benjamin M. Cohen, Neil Vasan, Yilun Ma, Konstantin Krismer, Jaylissa Torres Robles, Bert van de Kooij, Anne E. van Vlimmeren, Nicole Andrée-Busch, Norbert Käufer, Maxim V. Dorovkov, Alexey G. Ryazanov, Yuichiro Takagi, Edward R. Kastenhuber, Marcus D. Goncalves, Olivier Elemento, Dylan J. Taatjes, Alexandre Maucuer, Akio Yamashita, Alexei Degterev, Rune Linding, John Blenis, Peter V. Hornbeck, Benjamin E. Turk, Michael B. Yaffe, and Lewis C. Cantley
- Abstract
Protein phosphorylation is one of the most widespread post-translational modifications in biology. With the advent of mass spectrometry-based phosphoproteomics, more than 200,000 sites of serine and threonine phosphorylation have been reported, of which several thousand have been associated with human diseases and biological processes. For the vast majority of phosphorylation events, it is not yet known which of the more than 300 protein Ser/Thr kinases encoded in the human genome is responsible. Here, we utilize synthetic peptide libraries to profile the substrate sequence specificity of nearly every functional human Ser/Thr kinase. Viewed in its entirety, the substrate specificity of the kinome was substantially more diverse than expected and was driven extensively by negative selectivity. Our kinome-wide dataset was used to computationally annotate and identify the most likely protein kinases for every reported phosphorylation site in the human Ser/Thr phosphoproteome. For the small minority of phosphosites where the protein kinases involved have been previously identified, our predictions were in excellent agreement. When this approach was applied to examine the signaling response of tissues and cell lines to hormones, growth factors, targeted inhibitors, and environmental or genetic perturbations, it revealed unexpected insights into pathway complexity and compensation. Overall, these studies reveal the full extent of substrate specificity of the human Ser/Thr kinome, illuminate cellular signaling responses, and provide a rich resource to link unannotated phosphorylation events to biological pathways.
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- 2022
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6. Construction of human activity‐based phosphorylation networks
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Robert H Newman, Jianfei Hu, Hee‐Sool Rho, Zhi Xie, Crystal Woodard, John Neiswinger, Christopher Cooper, Matthew Shirley, Hillary M Clark, Shaohui Hu, Woochang Hwang, Jun Seop Jeong, George Wu, Jimmy Lin, Xinxin Gao, Qiang Ni, Renu Goel, Shuli Xia, Hongkai Ji, Kevin N Dalby, Morris J Birnbaum, Philip A Cole, Stefan Knapp, Alexey G Ryazanov, Donald J Zack, Seth Blackshaw, Tony Pawson, Anne‐Claude Gingras, Stephen Desiderio, Akhilesh Pandey, Benjamin E Turk, Jin Zhang, Heng Zhu, and Jiang Qian
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phosphorylation ,signaling networks ,systems biology ,Biology (General) ,QH301-705.5 ,Medicine (General) ,R5-920 - Abstract
Abstract The landscape of human phosphorylation networks has not been systematically explored, representing vast, unchartered territories within cellular signaling networks. Although a large number of in vivo phosphorylated residues have been identified by mass spectrometry (MS)‐based approaches, assigning the upstream kinases to these residues requires biochemical analysis of kinase‐substrate relationships (KSRs). Here, we developed a new strategy, called CEASAR, based on functional protein microarrays and bioinformatics to experimentally identify substrates for 289 unique kinases, resulting in 3656 high‐quality KSRs. We then generated consensus phosphorylation motifs for each of the kinases and integrated this information, along with information about in vivo phosphorylation sites determined by MS, to construct a high‐resolution map of phosphorylation networks that connects 230 kinases to 2591 in vivo phosphorylation sites in 652 substrates. The value of this data set is demonstrated through the discovery of a new role for PKA downstream of Btk (Bruton's tyrosine kinase) during B‐cell receptor signaling. Overall, these studies provide global insights into kinase‐mediated signaling pathways and promise to advance our understanding of cellular signaling processes in humans.
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- 2013
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7. Antagonists targeting eEF2 kinase rescue multiple aspects of pathophysiology in Alzheimer's disease model mice
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Nicole P. Kasica, Xueyan Zhou, Qian Yang, Xin Wang, Wenzhong Yang, Helena R. Zimmermann, Caroline E. Holland, Elizabeth Koscielniak, Hanzhi Wu, Anderson O. Cox, Jingyun Lee, Alexey G. Ryazanov, Cristina M. Furdui, and Tao Ma
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Elongation Factor 2 Kinase ,Cellular and Molecular Neuroscience ,Mice ,Amyloid beta-Peptides ,Peptide Elongation Factor 2 ,Alzheimer Disease ,Animals ,Syndrome ,Phosphorylation ,Biochemistry ,Article - Abstract
It is imperative to develop novel therapeutic strategies for Alzheimer's disease (AD) and related dementia syndromes based on solid mechanistic studies. Maintenance of memory and synaptic plasticity relies on de novo protein synthesis, which is partially regulated by phosphorylation of eukaryotic elongation factor 2 (eEF2) via its kinase eEF2K. Abnormally increased eEF2 phosphorylation and impaired mRNA translation have been linked to AD. We recently reported that prenatal genetic suppression of eEF2K is able to prevent aging-related cognitive deficits in AD model mice, suggesting the therapeutic potential of targeting eEF2K/eEF2 signaling in AD. Here, we tested two structurally distinct small-molecule eEF2K inhibitors in two different lines of AD model mice after the onset of cognitive impairments. Our data revealed that treatment with eEF2K inhibitors improved AD-associated synaptic plasticity impairments and cognitive dysfunction, without altering brain amyloid β (Aβ) and tau pathology. Furthermore, eEF2K inhibition alleviated AD-associated defects in dendritic spine morphology, post-synaptic density formation, protein synthesis, and dendritic polyribosome assembly. Our results may offer critical therapeutic implications for AD, and the proof-of-principle study indicates translational implication of inhibiting eEF2K for AD and related dementia syndromes. Cover Image for this issue: https://doi.org/10.1111/jnc.15392.
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- 2021
8. Antagonists targeting eEF2 kinase rescue multiple aspects of pathophysiology in Alzheimer’s disease model mice
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Wenzhong P Yang, Hanzhi Wu, Xueyan Zhou, Caroline E Holland, Tao Ma, Nicole P. Kasica, Xin Wang, Elizabeth Koscielniak, Jingyun Lee, Alexey G. Ryazanov, Anderson Cox, Cristina M. Furdui, and Helena R. Zimmermann
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Dendritic spine ,Amyloid ,business.industry ,Kinase ,Synaptic plasticity ,Medicine ,Dementia ,Phosphorylation ,EEF2 ,business ,medicine.disease ,Postsynaptic density ,Neuroscience - Abstract
It is imperative to develop novel therapeutic strategies for Alzheimer’s disease (AD) and related dementia syndromes based on solid mechanistic studies. Maintenance of memory and synaptic plasticity relies on de novo protein synthesis, which is partially regulated by phosphorylation of eukaryotic elongation factor 2 (eEF2) via its kinase eEF2K. Abnormally increased eEF2 phosphorylation and impaired mRNA translation have been linked to AD. We recently reported that prenatal genetic suppression of eEF2K is able to prevent aging-related cognitive deficits in AD model mice, suggesting the therapeutic potential of targeting eEF2K/eEF2 signaling in AD. Here, we tested two structurally distinct small-molecule eEF2K inhibitors in two different lines of AD model mice after onset of cognitive impairments. Our data revealed that treatment with eEF2K inhibitors improved AD-associated synaptic plasticity impairments and cognitive dysfunction, without altering brain amyloid β (Aβ) and tau pathology. Furthermore, eEF2K inhibition alleviated AD-associated defects in dendritic spine morphology, postsynaptic density formation, protein synthesis, and dendritic polyribosome assembly. Our results may offer critical therapeutic implications for AD, and the proof-of-principle study indicates translational implication of inhibiting eEF2K for AD and related dementia syndromes.One Sentence SummaryTreatment with eEF2K inhibitors and genetic eEF2K knockout improved cognitive deficits in Alzheimer’s disease model mice.
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- 2021
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9. Genetic reduction of eEF2 kinase alleviates pathophysiology in Alzheimer’s disease model mice
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Xueyan Zhou, Tao Ma, Nicole P. Kasica, Brenna C. Beckelman, Wenzhong Yang, Alexey G. Ryazanov, C. Dirk Keene, and Helena R. Zimmermann
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Elongation Factor 2 Kinase ,Male ,0301 basic medicine ,Dendritic spine ,Dendritic Spines ,Long-Term Potentiation ,Hyperphosphorylation ,Biology ,EEF2 ,Mice ,03 medical and health sciences ,0302 clinical medicine ,Peptide Elongation Factor 2 ,Alzheimer Disease ,Animals ,Humans ,Phosphorylation ,Mice, Knockout ,Kinase ,Post-Synaptic Density ,Long-term potentiation ,General Medicine ,Disease Models, Animal ,030104 developmental biology ,030220 oncology & carcinogenesis ,Synaptic plasticity ,Female ,Postsynaptic density ,Neuroscience ,Signal Transduction ,Research Article - Abstract
Molecular signaling mechanisms underlying Alzheimer’s disease (AD) remain unclear. Maintenance of memory and synaptic plasticity depend on de novo protein synthesis, dysregulation of which is implicated in AD. Recent studies showed AD-associated hyperphosphorylation of mRNA translation factor eukaryotic elongation factor 2 (eEF2), which results in inhibition of protein synthesis. We tested to determine whether suppression of eEF2 phosphorylation could improve protein synthesis capacity and AD-associated cognitive and synaptic impairments. Genetic reduction of the eEF2 kinase (eEF2K) in 2 AD mouse models suppressed AD-associated eEF2 hyperphosphorylation and improved memory deficits and hippocampal long-term potentiation (LTP) impairments without altering brain amyloid β (Aβ) pathology. Furthermore, eEF2K reduction alleviated AD-associated defects in dendritic spine morphology, postsynaptic density formation, de novo protein synthesis, and dendritic polyribosome assembly. Our results link eEF2K/eEF2 signaling dysregulation to AD pathophysiology and therefore offer a feasible therapeutic target.
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- 2019
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10. Suppression of the kinase for elongation factor 2 alleviates mGluR-LTD impairments in a mouse model of Alzheimer's disease
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Xueyan Zhou, Wenzhong Yang, Tao Ma, and Alexey G. Ryazanov
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0301 basic medicine ,Aging ,Receptor, Metabotropic Glutamate 5 ,Long-Term Potentiation ,Mice, Transgenic ,EEF2 ,Hippocampus ,Article ,03 medical and health sciences ,0302 clinical medicine ,Peptide Elongation Factor 2 ,Alzheimer Disease ,mental disorders ,Medicine ,Dementia ,Animals ,Phosphorylation ,Neuronal Plasticity ,business.industry ,Kinase ,General Neuroscience ,Imidazoles ,Long-term potentiation ,medicine.disease ,Elongation factor ,Disease Models, Animal ,030104 developmental biology ,Metabotropic glutamate receptor ,Protein Biosynthesis ,Synaptic plasticity ,Neurology (clinical) ,Geriatrics and Gerontology ,business ,Neuroscience ,030217 neurology & neurosurgery ,Developmental Biology - Abstract
Impaired mRNA translation (protein synthesis) is linked to Alzheimer's disease (AD) pathophysiology. Recent studies revealed the role of increased phosphorylation of eukaryotic elongation factor 2 (eEF2) in AD-associated cognitive deficits. Phosphorylation of eEF2 (at the Thr56 site) by its only known kinase eEF2K leads to inhibition of general protein synthesis. AD is considered as a disease of "synaptic failure" characterized by impairments of synaptic plasticity, including long-term potentiation (LTP) and long-term depression (LTD). Deficiency of metabotropic glutamate receptor 5-dependent LTD (mGluR-LTD) is indicated in cognitive syndromes associated with various neurological disorders, including AD, but the molecular signaling mechanisms underlying the mGluR-LTD dysregulation in AD remain unclear. In this brief communication, we report genetic repression of eEF2K in aged APP/PS1 AD model mice prevented AD-associated hippocampal mGluR-LTD deficits. Using a pharmacological approach, we further observed that impairments of mGluR-LTD in APP/PS1 mice were rescued by treating hippocampal slices with a small molecule eEF2K antagonist NH125. Our findings, taken together, suggest a critical role of abnormal protein synthesis dysregulation at the elongation phase in AD-associated mGluR-LTD failure, thus providing insights into a mechanistic understanding of synaptic impairments in AD and other related dementia syndromes.
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- 2020
11. Repression of eEF2 kinase improves deficits in novel object recognition memory in aged mice
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Hannah M. Jester, Tao Ma, Xueyan Zhou, Alexey G. Ryazanov, and Saahj P. Gosrani
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0301 basic medicine ,Elongation Factor 2 Kinase ,Male ,Aging ,Hyperphosphorylation ,Hippocampus ,Hippocampal formation ,Biology ,EEF2 ,Article ,03 medical and health sciences ,0302 clinical medicine ,Eukaryotic translation ,Memory ,Animals ,Cognitive Dysfunction ,Cognitive decline ,Phosphorylation ,Mice, Knockout ,Kinase ,General Neuroscience ,Recognition, Psychology ,Cell biology ,Disease Models, Animal ,030104 developmental biology ,Cognitive Aging ,Female ,Neurology (clinical) ,Geriatrics and Gerontology ,030217 neurology & neurosurgery ,Developmental Biology - Abstract
The normal aging process is commonly associated with mild cognitive deficits including memory decline. Previous studies indicate a role of dysregulated messenger ribonucleic acid translation capacity in cognitive defects associated with aging and aging-related diseases, including hyperphosphorylation of eukaryotic elongation factor 2 (eEF2). Phosphorylation of eEF2 by the kinase eEF2K inhibits its activity, hindering general protein synthesis. Here, we sought to determine whether cognitive deficits in aged mice can be improved by genetically deleting eEF2K (eEF2K KO) and consequently reduction of eEF2 phosphorylation. We found that suppression of eEF2K prevented aging-related deficits in novel object recognition memory. Interestingly, deletion of eEF2K did not alter overall protein synthesis in the hippocampus. Ultrastructural analysis revealed increase size and larger active zone lengths of postsynaptic densities in the hippocampus of aged eEF2K KO mice. Biochemical assays showed hippocampal eIF2α hyperphosphorylation in aged eEF2K KO mice, indicating inhibition of translation initiation. Our findings may provide insight into mechanistic understanding and thus development of novel therapeutic strategies for aging-related cognitive decline.
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- 2020
12. Glycine supplementation extends lifespan of male and female mice
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Tim Stearns, Randy Strong, Elizabeth Fernandez, Richard A. Miller, Joel Brind, James F. Nelson, Alexey G. Ryazanov, Martin A. Javors, Warren Ladiges, Kevin Flurkey, Molly A. Bogue, Douglas E. Vaughan, Jessica M. Snyder, C. Michael Astle, David E. Harrison, Christiaan Leeuwenburgh, and Francesca Macchiarini
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0301 basic medicine ,Male ,medicine.medical_specialty ,anti‐aging ,Aging ,Inulin ,Longevity ,Glycine ,Context (language use) ,Biology ,Piperazines ,03 medical and health sciences ,chemistry.chemical_compound ,Mice ,0302 clinical medicine ,Dietary Amino Acid ,Internal medicine ,medicine ,para-Aminobenzoates ,Animals ,Urokinase ,Aspirin ,Original Paper ,Mice, Inbred BALB C ,Methionine ,Adenomatosis, Pulmonary ,Cell Biology ,Original Papers ,longevity regulation ,Diet ,Mice, Inbred C57BL ,030104 developmental biology ,Endocrinology ,chemistry ,Toxicity ,Dietary Supplements ,Female ,030217 neurology & neurosurgery ,life span ,medicine.drug - Abstract
Diets low in methionine extend lifespan of rodents, though through unknown mechanisms. Glycine can mitigate methionine toxicity, and a small prior study has suggested that supplemental glycine could extend lifespan of Fischer 344 rats. We therefore evaluated the effects of an 8% glycine diet on lifespan and pathology of genetically heterogeneous mice in the context of the Interventions Testing Program. Elevated glycine led to a small (4%–6%) but statistically significant lifespan increase, as well as an increase in maximum lifespan, in both males (p = 0.002) and females (p
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- 2019
13. Paradoxical Roles of Elongation Factor-2 Kinase in Stem Cell Survival
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Eileen White, Yi Liao, Jianmin Chen, Zuguo Liu, Jason Jay Merkin, Zhixian Hu, Hsueh-Ping Chu, Kurt Degenhardt, and Alexey G. Ryazanov
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Elongation Factor 2 Kinase ,0301 basic medicine ,Programmed cell death ,Cell Survival ,Mitosis ,Apoptosis ,Biology ,Radiation Tolerance ,Biochemistry ,Mice ,03 medical and health sciences ,Intestine, Small ,Animals ,education ,Molecular Biology ,Mitotic catastrophe ,Protein kinase B ,Mice, Knockout ,education.field_of_study ,Kinase ,Stem Cells ,Cell Biology ,Cell cycle ,Cell biology ,Radiation Injuries, Experimental ,030104 developmental biology ,Gamma Rays ,Cancer cell ,Elongation Factor-2 Kinase ,Tumor Suppressor Protein p53 ,Stem cell - Abstract
Protein synthesis inhibition is an immediate response during stress to switch the composition of protein pool in order to adapt to the new environment. It was reported that this response could be either protective or deleterious. However, how cells choose to live or die upon protein synthesis inhibition is largely unknown. Previously, we have shown that elongation factor-2 kinase (eEF2K), a protein kinase that suppresses protein synthesis during elongation phase, is a positive regulator of apoptosis both in vivo and in vitro Consistently, here we report that knock-out of eEF2K protects mice from a lethal dose of whole-body ionizing radiation at 8 Gy by reducing apoptosis levels in both bone marrow and gastrointestinal tracts. Surprisingly, similar to the loss of p53, eEF2K deficiency results in more severe damage to the gastrointestinal tract at 20 Gy with the increased mitotic cell death in small intestinal stem cells. Furthermore, using epithelial cell lines, we showed that eEF2K is required for G2/M arrest induced by radiation to prevent mitotic catastrophe in a p53-independent manner. Specifically, we observed the elevation of Akt/ERK activity as well as the reduction of p21 expression in Eef2k(-/-) cells. Therefore, eEF2K also provides a protective strategy to maintain genomic integrity by arresting cell cycle in response to stress. Our results suggest that protective versus pro-apoptotic roles of eEF2K depend on the type of cells: eEF2K is protective in highly proliferative cells, such as small intestinal stem cells and cancer cells, which are more susceptible to mitotic catastrophe.
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- 2016
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14. eEF-2 kinase is a critical regulator of Warburg effect through controlling PP2A-A synthesis
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Yaxin Cheng, Yoshinori Takahashi, Guohui Wan, Harold A. Harvey, Shan Y, Jin Ming Yang, Jason Liao, David Liu, Xingcong Ren, Xi-Sha Chen, Yang Jw, Lan-ya Li, A. F. Chen, Li Zhang, Y. Yuan, Alexey G. Ryazanov, Gavin P. Robertson, Yongguang Tao, Li Y, and Han B
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Elongation Factor 2 Kinase ,0301 basic medicine ,Cancer Research ,Mice, Nude ,Breast Neoplasms ,Biology ,Transfection ,medicine.disease_cause ,Mice ,03 medical and health sciences ,Cell Line, Tumor ,Genetics ,medicine ,Animals ,Humans ,Glycolysis ,Protein Phosphatase 2 ,Molecular Biology ,Kinase ,Protein phosphatase 2 ,Warburg effect ,Cell biology ,030104 developmental biology ,Cancer cell ,MCF-7 Cells ,Heterografts ,Female ,Carcinogenesis ,Pyruvate kinase - Abstract
Cancer cells predominantly metabolize glucose by glycolysis to produce energy in order to meet their metabolic requirement, a phenomenon known as Warburg effect. Although Warburg effect is considered a peculiarity critical for survival and proliferation of cancer cells, the regulatory mechanisms behind this phenomenon remain incompletely understood. We report here that eukaryotic elongation factor-2 kinase (eEF-2K), a negative regulator of protein synthesis, has a critical role in promoting glycolysis in cancer cells. We showed that deficiency in eEF-2K significantly reduced the uptake of glucose and decreased the productions of lactate and adenosine triphosphate in tumor cells and in the Ras-transformed mouse embryonic fibroblasts. We further demonstrated that the promotive effect of eEF-2K on glycolysis resulted from the kinase-mediated restriction of synthesis of the protein phosphatase 2A-A (PP2A-A), a key factor that facilitates the ubiquitin-proteasomal degradation of c-Myc protein, as knockdown of eEF-2K expression led to a significant increase in PP2A-A protein synthesis and remarkable downregulation of c-Myc and pyruvate kinase M2 isoform, the key glycolytic enzyme transcriptionally activated by c-Myc. In addition, depletion of eEF-2K reduced the ability of the transformed cells to proliferate and enhanced the sensitivity of tumor cells to chemotherapy both in vitro and in vivo. These results, which uncover a role of the eEF-2K-mediated control of PP2A-A in tumor cell glycolysis, provide new insights into the regulation of the Warburg effect.
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- 2016
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15. Transient Receptor Potential Melastatin 7 Cation Channel Kinase
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Tayze T. Antunes, Lillia V. Ryazanova, Alvin Shrier, Alvaro Yogi, Alexey G. Ryazanov, Rhian M. Touyz, Glaucia E. Callera, Alexander Zhai, Ying He, and Duncan J. Stewart
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0301 basic medicine ,medicine.medical_specialty ,biology ,Kinase ,business.industry ,Calpain ,030204 cardiovascular system & hematology ,medicine.disease ,Angiotensin II ,03 medical and health sciences ,030104 developmental biology ,0302 clinical medicine ,Endocrinology ,Downregulation and upregulation ,TRPM7 ,Internal medicine ,Pathophysiology of hypertension ,cardiovascular system ,Internal Medicine ,medicine ,biology.protein ,Signal transduction ,business ,Protein kinase B - Abstract
Transient receptor potential melastatin 7 (TRPM7) is a bifunctional protein comprising a magnesium (Mg 2+ )/cation channel and a kinase domain. We previously demonstrated that vasoactive agents regulate vascular TRPM7. Whether TRPM7 plays a role in the pathophysiology of hypertension and associated cardiovascular dysfunction is unknown. We studied TRPM7 kinase–deficient mice (TRPM7Δkinase; heterozygous for TRPM7 kinase) and wild-type (WT) mice infused with angiotensin II (Ang II; 400 ng/kg per minute, 4 weeks). TRPM7 kinase expression was lower in heart and aorta from TRPM7Δkinase versus WT mice, effects that were further reduced by Ang II infusion. Plasma Mg 2+ was lower in TRPM7Δkinase versus WT mice in basal and stimulated conditions. Ang II increased blood pressure in both strains with exaggerated responses in TRPM7Δkinase versus WT groups ( P
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- 2016
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16. TRPM7 kinase activity regulates murine mast cell degranulation
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Fionán Ó Dúill, Alexey G. Ryazanov, Lillia V. Ryazanova, Reinhold Penner, Sayuri Suzuki, Susanna Zierler, Andrea Fleig, and Adriana Sumoza-Toledo
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0301 basic medicine ,Physiology ,Cell Degranulation ,Degranulation ,Biology ,Mast cell ,Cell biology ,03 medical and health sciences ,chemistry.chemical_compound ,030104 developmental biology ,medicine.anatomical_structure ,Histamine H2 receptor ,chemistry ,medicine ,Histamine H4 receptor ,Kinase activity ,Intracellular ,Histamine - Abstract
Key points The Mg2+ and Ca2+ conducting transient receptor potential melastatin 7 (TRPM7) channel–enzyme (chanzyme) has been implicated in immune cell function. Mice heterozygous for a TRPM7 kinase deletion are hyperallergic, while mice with a single point mutation at amino acid 1648, silencing kinase activity, are not. As mast cell mediators trigger allergic reactions, we here determine the function of TRPM7 in mast cell degranulation and histamine release. Our data establish that TRPM7 kinase activity regulates mast cell degranulation and release of histamine independently of TRPM7 channel function. Our findings suggest a regulatory role of TRPM7 kinase activity on intracellular Ca2+ and extracellular Mg2+ sensitivity of mast cell degranulation. Abstract Transient receptor potential melastatin 7 (TRPM7) is a divalent ion channel with a C-terminally located α-kinase. Mice heterozygous for a TRPM7 kinase deletion (TRPM7+/∆K) are hypomagnesaemic and hyperallergic. In contrast, mice carrying a single point mutation at amino acid 1648, which silences TRPM7 kinase activity (TRPM7KR), are not hyperallergic and are resistant to systemic magnesium (Mg2+) deprivation. Since allergic reactions are triggered by mast cell-mediated histamine release, we investigated the function of TRPM7 on mast cell degranulation and histamine release using wild-type (TRPM7+/+), TRPM7+/∆K and TRPM7KR mice. We found that degranulation and histamine release proceeded independently of TRPM7 channel function. Furthermore, extracellular Mg2+ assured unperturbed IgE-DNP-dependent exocytosis, independently of TRPM7. However, impairment of TRPM7 kinase function suppressed IgE-DNP-dependent exocytosis, slowed the cellular degranulation rate, and diminished the sensitivity to intracellular calcium (Ca2+) in G protein-induced exocytosis. In addition, G protein-coupled receptor (GPCR) stimulation revealed strong suppression of histamine release, whereas removal of extracellular Mg2+ caused the phenotype to revert. We conclude that the TRPM7 kinase activity regulates murine mast cell degranulation by changing its sensitivity to intracellular Ca2+ and affecting granular mobility and/or histamine contents.
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- 2016
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17. Chanzyme TRPM7 protects against cardiovascular inflammation and fibrosis
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Francisco J, Rios, Zhi-Guo, Zou, Adam P, Harvey, Katie Y, Harvey, Ryszard, Nosalski, Panagiota, Anyfanti, Livia L, Camargo, Silvia, Lacchini, Alexey G, Ryazanov, Lillia, Ryazanova, Sarah, McGrath, Tomasz J, Guzik, Carl S, Goodyear, Augusto C, Montezano, and Rhian M, Touyz
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Inflammation ,Male ,Mice, Knockout ,Mice, 129 Strain ,Ventricular Remodeling ,Macrophages ,Myocardium ,Transendothelial and Transepithelial Migration ,TRPM Cation Channels ,Cardiomegaly ,Fibroblasts ,Fibrosis ,Coculture Techniques ,Mice, Inbred C57BL ,Animals ,Leukocyte Rolling ,Magnesium ,Inflammation Mediators ,Cardiomyopathies ,Cells, Cultured ,Cell Proliferation ,Signal Transduction - Abstract
Transient Receptor Potential Melastatin 7 (TRPM7) cation channel is a chanzyme (channel + kinase) that influences cellular Mg2+ homeostasis and vascular signalling. However, the pathophysiological significance of TRPM7 in the cardiovascular system is unclear. The aim of this study was to investigate the role of this chanzyme in the cardiovascular system focusing on inflammation and fibrosis.TRPM7-deficient mice with deletion of the kinase domain (TRPM7+/Δkinase) were studied and molecular mechanisms investigated in TRPM7+/Δkinase bone marrow-derived macrophages (BMDM) and co-culture systems with cardiac fibroblasts. TRPM7-deficient mice had significant cardiac hypertrophy, fibrosis, and inflammation. Cardiac collagen and fibronectin content, expression of pro-inflammatory mediators (SMAD3, TGFβ) and cytokines [interleukin (IL)-6, IL-10, IL-12, tumour necrosis factor-α] and phosphorylation of the pro-inflammatory signalling molecule Stat1, were increased in TRPM7+/Δkinase mice. These processes were associated with infiltration of inflammatory cells (F4/80+CD206+ cardiac macrophages) and increased galectin-3 expression. Cardiac [Mg2+]i, but not [Ca2+]i, was reduced in TRPM7+/Δkinase mice. Calpain, a downstream TRPM7 target, was upregulated (increased expression and activation) in TRPM7+/Δkinase hearts. Vascular functional and inflammatory responses, assessed in vivo by intra-vital microscopy, demonstrated impaired neutrophil rolling, increased neutrophil: endothelial attachment and transmigration of leucocytes in TRPM7+/Δkinase mice. TRPM7+/Δkinase BMDMs had increased levels of galectin-3, IL-10, and IL-6. In co-culture systems, TRPM7+/Δkinase macrophages increased expression of fibronectin, proliferating cell nuclear antigen, and TGFβ in cardiac fibroblasts from wild-type mice, effects ameliorated by MgCl2 treatment.We identify a novel anti-inflammatory and anti-fibrotic role for TRPM7 and suggest that its protective effects are mediated, in part, through Mg2+-sensitive processes.
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- 2018
18. Genetic removal of eIF2α kinase PERK in mice enables hippocampal L-LTP independent of mTORC1 activity
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Xueyan Zhou, Helena R. Zimmermann, Tao Ma, Alexey G. Ryazanov, Lucas Dufresne Galli, Nicole P. Kasica, Wenzhong Yang, and Brenna C. Beckelman
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0301 basic medicine ,Male ,endocrine system ,Indoles ,Long-Term Potentiation ,Biophysics ,mTORC1 ,Hippocampal formation ,In Vitro Techniques ,Mechanistic Target of Rapamycin Complex 1 ,Protein Serine-Threonine Kinases ,EEF2 ,Biochemistry ,Hippocampus ,Article ,03 medical and health sciences ,Cellular and Molecular Neuroscience ,Mice ,0302 clinical medicine ,Eukaryotic initiation factor ,Animals ,Enzyme Inhibitors ,Phosphorylation ,Mice, Knockout ,Protein Synthesis Inhibitors ,Sirolimus ,Chemistry ,Kinase ,Adenine ,Long-term potentiation ,Electric Stimulation ,Cell biology ,030104 developmental biology ,Gene Expression Regulation ,Synaptic plasticity ,Female ,030217 neurology & neurosurgery ,Anisomycin ,Immunosuppressive Agents - Abstract
Characterization of the molecular signaling pathways underlying protein synthesis-dependent forms of synaptic plasticity, such as late long-term potentiation (L-LTP), can provide insights not only into memory expression/maintenance under physiological conditions but also potential mechanisms associated with the pathogenesis of memory disorders. Here, we report in mice that L-LTP failure induced by the mammalian (mechanistic) target of rapamycin complex 1 (mTORC1) inhibitor rapamycin is reversed by brain-specific genetic deletion of PKR-like ER kinase, PERK (PERK KO), a kinase for eukaryotic initiation factor 2α (eIF2α). In contrast, genetic removal of general control non-derepressible-2, GCN2 (GCN2 KO), another eIF2α kinase, or treatment of hippocampal slices with the PERK inhibitor GSK2606414, does not rescue rapamycin-induced L-LTP failure, suggesting mechanisms independent of eIF2α phosphorylation. Moreover, we demonstrate that phosphorylation of eukaryotic elongation factor 2 (eEF2) is significantly decreased in PERK KO mice but unaltered in GCN2 KO mice or slices treated with the PERK inhibitor. Reduction in eEF2 phosphorylation results in increased general protein synthesis, and thus could contribute to the mTORC1-independent L-LTP in PERK KO mice. We further performed experiments on mutant mice with genetic removal of eEF2K (eEF2K KO), the only known kinase for eEF2, and found that L-LTP in eEF2K KO mice is insensitive to rapamycin. These data, for the first time, connect reduction in PERK activity with the regulation of translation elongation in enabling L-LTP independent of mTORC1. Thus, our findings indicate previously unrecognized levels of complexity in the regulation of protein synthesis-dependent synaptic plasticity. Read the Editorial Highlight for this article on page 119. Cover Image for this issue: doi: 10.1111/jnc.14185.
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- 2017
19. mTORC1-mediated translational elongation limits intestinal tumour initiation and growth
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Thomas Jamieson, Carolyn J.P. Jones, Saadia A. Karim, Anne E. Willis, Martin Bushell, Helen A. Casey, Alexey G. Ryazanov, Marcos Vidal, Nahum Sonenberg, Kevin Myant, Mario Pende, Sorina Radulescu, William J. Faller, Owen J. Sansom, Alessandro Scopelliti, Kate Dudek, Rachel A. Ridgway, Michael N. Hall, Thomas J. Jackson, Julia B. Cordero, John R. P. Knight, Oded Meyuhas, David J. Huels, Willis, Anne [0000-0002-1470-8531], and Apollo - University of Cambridge Repository
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Elongation Factor 2 Kinase ,Male ,Oncogene Protein p55(v-myc) ,Genes, APC ,Adenomatous Polyposis Coli Protein ,Peptide Chain Elongation, Translational ,mTORC1 ,Mechanistic Target of Rapamycin Complex 1 ,Biology ,EEF2 ,Article ,Mice ,03 medical and health sciences ,0302 clinical medicine ,Peptide Elongation Factor 2 ,Intestinal Neoplasms ,Animals ,education ,PI3K/AKT/mTOR pathway ,Cell Proliferation ,030304 developmental biology ,0303 health sciences ,education.field_of_study ,Multidisciplinary ,Kinase ,Cell growth ,Ribosomal Protein S6 Kinases ,TOR Serine-Threonine Kinases ,RPTOR ,3. Good health ,Enzyme Activation ,Mice, Inbred C57BL ,Wnt Proteins ,Cell Transformation, Neoplastic ,Multiprotein Complexes ,030220 oncology & carcinogenesis ,Immunology ,Cancer research ,Elongation Factor-2 Kinase ,Translational elongation ,Signal Transduction - Abstract
Inactivation of APC is a strongly predisposing event in the development of colorectal cancer, prompting the search for vulnerabilities specific to cells that have lost APC function. Signalling through the mTOR pathway is known to be required for epithelial cell proliferation and tumour growth, and the current paradigm suggests that a critical function of mTOR activity is to upregulate translational initiation through phosphorylation of 4EBP1 (refs 6, 7). This model predicts that the mTOR inhibitor rapamycin, which does not efficiently inhibit 4EBP1 (ref. 8), would be ineffective in limiting cancer progression in APC-deficient lesions. Here we show in mice that mTOR complex 1 (mTORC1) activity is absolutely required for the proliferation of Apc-deficient (but not wild-type) enterocytes, revealing an unexpected opportunity for therapeutic intervention. Although APC-deficient cells show the expected increases in protein synthesis, our study reveals that it is translation elongation, and not initiation, which is the rate-limiting component. Mechanistically, mTORC1-mediated inhibition of eEF2 kinase is required for the proliferation of APC-deficient cells. Importantly, treatment of established APC-deficient adenomas with rapamycin (which can target eEF2 through the mTORC1-S6K-eEF2K axis) causes tumour cells to undergo growth arrest and differentiation. Taken together, our data suggest that inhibition of translation elongation using existing, clinically approved drugs, such as the rapalogs, would provide clear therapeutic benefit for patients at high risk of developing colorectal cancer.
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- 2014
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20. Phosphorylation of Eukaryotic Elongation Factor 2 (eEF2) by Cyclin A–Cyclin-Dependent Kinase 2 Regulates Its Inhibition by eEF2 Kinase
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Yong Chi, Yi Liao, Bruce E. Clurman, Alexey G. Ryazanov, Markus Welcker, John H. Carter, Jherek Swanger, and Asli A. Hizli
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Elongation Factor 2 Kinase ,Threonine ,inorganic chemicals ,Molecular Sequence Data ,Mitosis ,Cyclin A ,macromolecular substances ,environment and public health ,Cell Line ,Phosphorylation cascade ,Peptide Elongation Factor 2 ,Cyclin-dependent kinase ,Serine ,Humans ,Point Mutation ,Protein phosphorylation ,Amino Acid Sequence ,Phosphorylation ,education ,Molecular Biology ,Cyclin-dependent kinase 1 ,education.field_of_study ,biology ,Cyclin-Dependent Kinase 2 ,Cyclin-dependent kinase 2 ,Articles ,Cell Biology ,Cell biology ,enzymes and coenzymes (carbohydrates) ,biology.protein ,Cyclin-dependent kinase complex ,bacteria ,Elongation Factor-2 Kinase - Abstract
Protein synthesis is highly regulated via both initiation and elongation. One mechanism that inhibits elongation is phosphorylation of eukaryotic elongation factor 2 (eEF2) on threonine 56 (T56) by eEF2 kinase (eEF2K). T56 phosphorylation inactivates eEF2 and is the only known normal eEF2 functional modification. In contrast, eEF2K undergoes extensive regulatory phosphorylations that allow diverse pathways to impact elongation. We describe a new mode of eEF2 regulation and show that its phosphorylation by cyclin A–cyclin-dependent kinase 2 (CDK2) on a novel site, serine 595 (S595), directly regulates T56 phosphorylation by eEF2K. S595 phosphorylation varies during the cell cycle and is required for efficient T56 phosphorylation in vivo. Importantly, S595 phosphorylation by cyclin A-CDK2 directly stimulates eEF2 T56 phosphorylation by eEF2K in vitro, and we suggest that S595 phosphorylation facilitates T56 phosphorylation by recruiting eEF2K to eEF2. S595 phosphorylation is thus the first known eEF2 modification that regulates its inhibition by eEF2K and provides a novel mechanism linking the cell cycle machinery to translational control. Because all known eEF2 regulation is exerted via eEF2K, S595 phosphorylation may globally couple the cell cycle machinery to regulatory pathways that impact eEF2K activity.
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- 2013
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21. Author response: Epithelial magnesium transport by TRPM6 is essential for prenatal development and adult survival
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Yuriy Shymkiv, Emiel P. C. van der Vorst, Christian Weber, Thomas Gudermann, Hans Zischka, Christin Leitzinger, Annette Schürmann, David G. Simmons, Annika Wisnowsky, Susanna Zierler, Alexey G. Ryazanov, Silvia Ferioli, Onder A. Yildirim, Ludmila Sytik, Vindi Jurinovic, Harald Bartsch, Wenke Jonas, Attila Braun, Banu Akdogan, Lorenz Mittermeier, Claudia Einer, Karl Sotlar, Friedrich Torben, and Vladimir Chubanov
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Magnesium transport ,business.industry ,TRPM6 ,Medicine ,Physiology ,business ,Prenatal development - Published
- 2016
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22. Epithelial magnesium transport by TRPM6 is essential for prenatal development and adult survival
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Attila Braun, Christian Weber, Ludmila Sytik, Susanna Zierler, Vindi Jurinovic, Annette Schürmann, Lorenz Mittermeier, Banu Akdogan, Hans Zischka, David G. Simmons, Christin Leitzinger, Yuriy Shymkiv, Thomas Gudermann, Emiel P. C. van der Vorst, Annika Wisnowsky, Claudia Einer, Friedrich Torben, Vladimir Chubanov, Karl Sotlar, Alexey G. Ryazanov, Onder A. Yildirim, Harald Bartsch, Silvia Ferioli, Wenke Jonas, RS: CARIM - R1.01 - Blood proteins & engineering, RS: CARIM - R3.07 - Structure-function analysis of the chemokine interactome for therapeutic targeting and imaging in atherosclerosis, Promovendi CD, Pathologie, and Biochemie
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0301 basic medicine ,medicine.medical_specialty ,kidney ,placenta ,Mouse ,QH301-705.5 ,Science ,Embryonic Development ,TRPM Cation Channels ,Biology ,magnesium ,General Biochemistry, Genetics and Molecular Biology ,03 medical and health sciences ,Gene Knockout Techniques ,Mice ,longevity ,Pregnancy ,ddc:570 ,Internal medicine ,TRPM6 ,Placenta ,medicine ,Animals ,Biology (General) ,Yolk sac ,Intestinal Mucosa ,Human Biology and Medicine ,intestine ,Yolk Sac ,Kidney ,General Immunology and Microbiology ,General Neuroscience ,Embryogenesis ,Wild type ,General Medicine ,Biophysics and Structural Biology ,Phenotype ,Survival Analysis ,Prenatal development ,030104 developmental biology ,medicine.anatomical_structure ,Endocrinology ,Medicine ,Female ,trophoblast stem cells ,Research Article - Abstract
Mg2+ regulates many physiological processes and signalling pathways. However, little is known about the mechanisms underlying the organismal balance of Mg2+. Capitalizing on a set of newly generated mouse models, we provide an integrated mechanistic model of the regulation of organismal Mg2+ balance during prenatal development and in adult mice by the ion channel TRPM6. We show that TRPM6 activity in the placenta and yolk sac is essential for embryonic development. In adult mice, TRPM6 is required in the intestine to maintain organismal Mg2+ balance, but is dispensable in the kidney. Trpm6 inactivation in adult mice leads to a shortened lifespan, growth deficit and metabolic alterations indicative of impaired energy balance. Dietary Mg2+ supplementation not only rescues all phenotypes displayed by Trpm6-deficient adult mice, but also may extend the lifespan of wildtype mice. Hence, maintenance of organismal Mg2+ balance by TRPM6 is crucial for prenatal development and survival to adulthood. DOI: http://dx.doi.org/10.7554/eLife.20914.001, eLife digest A balanced diet contains a variety of minerals such as magnesium ions, which are required for many chemical reactions in our body. A shortage of magnesium ions is linked to many diseases and is thought to be especially harmful to babies in the womb and shortly after birth. Magnesium ion deficiency is widespread in human populations and in the US is thought to affect up to 68% of people. Despite its prominent role in human health, our understanding of how the body maintains the right balance of magnesium ions remains extremely vague. Magnesium ions can enter and leave a cell by passing through specific types of proteins that form channels in the membrane surrounding the cell. There are thought to be around ten types of these magnesium ion channels in human cells, but we do not know what roles any of them perform in the body. One such channel called TRPM6 may be particularly important because mutations in the gene that encodes this channel can cause magnesium ion deficiency in human infants. However, the loss of TRPM6 in mice disrupts how mouse embryos develop, suggesting that our current view on the role that TRPM6 plays in regulating the magnesium ion balance in humans may be too simplistic. To address this question, Chubanov et al. studied mice with mutations that disrupted the production of TRPM6 in specific tissues only. The experiments show that TRPM6 primarily operates in the placenta and intestine to regulate the balance of magnesium ions in the body. Further experiments show that the loss of TRPM6 in adult mice leads to reduced lifespan, growth defects and poor health by disrupting important biochemical reactions. Supplying the mutant mice with magnesium ion supplements improved their health and could extend lifespans of normal animals. The findings of Chubanov et al. demonstrate that TRPM6 plays a crucial role in regulating the levels of magnesium ions in mice before birth and into adulthood. The next step is to carry out large-scale experiments to investigate the effects of altering the levels of magnesium ions in human diets. DOI: http://dx.doi.org/10.7554/eLife.20914.002
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- 2016
23. A Critical Role of TRPM7 As an Ion Channel Protein in Mediating the Mineralization of the Craniofacial Hard Tissues
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Dawud Abduweli, Yan Zhang, Lillia V. Ryazanova, Michael H. Le, Pamela K. Den Besten, Zhixian Hu, Yukiko Nakano, Sunita P. Ho, and Alexey G. Ryazanov
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0301 basic medicine ,Mineralized tissues ,Physiology ,TRPM7 ,magnesium homeostasis ,dentin ,bone ,ion transport ,03 medical and health sciences ,stomatognathic system ,Physiology (medical) ,Magnesium ion ,Original Research ,030102 biochemistry & molecular biology ,Chemistry ,ALPL ,enamel ,biomineralization ,Cell biology ,030104 developmental biology ,Odontoblast ,Biochemistry ,Alkaline phosphatase ,Ameloblast ,alkaline phosphatase ,Immunostaining - Abstract
Magnesium ion (Mg(2+)) is the fourth most common cation in the human body, and has a crucial role in many physiological functions. Mg(2+) homeostasis is an important contributor to bone development, however, its roles in the development of dental mineralized tissues have not yet been well known. We identified that transient receptor potential cation channel, subfamily M, member 7 (TRPM7), was significantly upregulated in the mature ameloblasts as compared to other ameloblasts through our whole transcript microarray analyses of the ameloblasts. TRPM7, an ion channel for divalent metal cations with an intrinsic serine/threonine protein kinase activity, has been characterized as a key regulator of whole body Mg(2+) homeostasis. Semi-quantitative PCR and immunostaining for TRMP7 confirmed its upregulation during the maturation stage of enamel formation, at which ameloblasts direct rapid mineralization of the enamel matrix. The significantly hypomineralized craniofacial structures, including incisors, molars, and cranial bones were demonstrated by microCT analysis, von Kossa and trichrome staining in Trpm7 (Δkinase∕+) mice. A previously generated heterozygous mouse model with the deletion of the TRPM7 kinase domain. Interestingly, the skeletal phenotype of Trpm7 (Δkinase∕+) mice resembled those found in the tissue-nonspecific alkaline phosphatase (Alpl) KO mice, thus we further examined whether ALPL protein content and alkaline phosphatase (ALPase) activity in ameloblasts, odontoblasts and osteoblasts were affected in those mice. While ALPL protein in Trpm7 (Δkinase∕+) mice remained at the similar level as that in wt mice, ALPase activities in the Trpm7 (Δkinase∕+) mice were almost nonexistent. Supplemented magnesium successfully rescued the activities of ALPase in ameloblasts, odontoblasts and osteoblasts of Trpm7 (Δkinase∕+) mice. These results suggested that TRPM7 is essential for mineralization of enamel as well as dentin and bone by providing sufficient Mg(2+) for the ALPL activity, underlining the key importance of ALPL for biomineralization.
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- 2016
24. eEF2K/eEF2 Pathway Controls the Excitation/Inhibition Balance and Susceptibility to Epileptic Seizures
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Michael M. Poe, Luisa Ponzoni, Luca Murru, Flavia Valtorta, Elham Taha, Chiara Verpelli, Angela Bachi, Carlo Sala, Mariaelvina Sala, Maura Francolini, Kobi Rosenblum, Iliana Barrera, Jonathan Zapata, James M. Cook, Christopher Heise, Adele Mossa, Maksym V. Kopanitsa, Elena Vezzoli, Fabrizia C. Guarnieri, Maria Passafaro, Roberta Benfante, Christopher G. Proud, Giulio Ippolito, Francesco Rusconi, Michael Rajesh Stephen, Angela Cattaneo, Alexey G. Ryazanov, Caterina Montani, Daniela Braida, Heise, Christopher, Taha, Elham, Murru, Luca, Ponzoni, Luisa, Cattaneo, Angela, Guarnieri, Fabrizia C, Montani, Caterina, Mossa, Adele, Vezzoli, Elena, Ippolito, Giulio, Zapata, Jonathan, Barrera, Iliana, Ryazanov, Alexey G, Cook, Jame, Poe, Michael, Stephen, Michael Rajesh, Kopanitsa, Maksym, Benfante, Roberta, Rusconi, Francesco, Braida, Daniela, Francolini, Maura, Proud, Christopher G, Valtorta, Flavia, Passafaro, Maria, Sala, Mariaelvina, Bachi, Angela, Verpelli, Chiara, Rosenblum, Kobi, and Sala, Carlo
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0301 basic medicine ,Elongation Factor 2 Kinase ,Cognitive Neuroscience ,Neural Inhibition ,Biology ,Neurotransmission ,EEF2 ,Inhibitory postsynaptic potential ,Hippocampus ,Synaptic Transmission ,gamma-Aminobutyric acid ,Conditioning (Psychology) ,inhibitory synapse ,Rats, Sprague-Dawley ,03 medical and health sciences ,Cellular and Molecular Neuroscience ,Epilepsy ,0302 clinical medicine ,GABA receptor ,Conditioning, Psychological ,medicine ,Animals ,translation elongation regulation ,Cells, Cultured ,gamma-Aminobutyric Acid ,Cerebral Cortex ,Mice, Knockout ,Neurons ,hippocampu ,Animal ,GABAA receptor ,Synapsin ,Original Articles ,Fear ,Neuron ,medicine.disease ,Receptors, GABA-A ,Synapsins ,fear conditioning ,Mice, Inbred C57BL ,Disease Models, Animal ,030104 developmental biology ,Neuroscience ,030217 neurology & neurosurgery ,medicine.drug - Abstract
Alterations in the balance of inhibitory and excitatory synaptic transmission have been implicated in the pathogenesis of neurological disorders such as epilepsy. Eukaryotic elongation factor 2 kinase (eEF2K) is a highly regulated, ubiquitous kinase involved in the control of protein translation. Here, we show that eEF2K activity negatively regulates GABAergic synaptic transmission. Indeed, loss of eEF2K increases GABAergic synaptic transmission by upregulating the presynaptic protein Synapsin 2b and α5-containing GABAA receptors and thus interferes with the excitation/inhibition balance. This cellular phenotype is accompanied by an increased resistance to epilepsy and an impairment of only a specific hippocampal-dependent fear conditioning. From a clinical perspective, our results identify eEF2K as a potential novel target for antiepileptic drugs, since pharmacological and genetic inhibition of eEF2K can revert the epileptic phenotype in a mouse model of human epilepsy.
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- 2016
25. Pharmacological eEF2K activation promotes cell death and inhibits cancer progression
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Olivier Demaria, Léa Zaffalon, Michel Gilliet, Rébecca Panes, Alexey G. Ryazanov, Fabio Martinon, and Aude De Gassart
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0301 basic medicine ,Drug Resistance ,Gene Expression ,AMP-Activated Protein Kinases ,Biochemistry ,Mice ,Peptide Elongation Factor 2 ,immune system diseases ,Neoplasms ,HIV Protease Inhibitor ,Phosphorylation ,Mice, Knockout ,education.field_of_study ,Nelfinavir ,Cell Death ,TOR Serine-Threonine Kinases ,virus diseases ,Articles ,3. Good health ,Cell biology ,Tumor Burden ,Disease Progression ,Female ,medicine.drug ,Elongation Factor 2 Kinase ,Programmed cell death ,Cell Survival ,Biology ,Mechanistic Target of Rapamycin Complex 1 ,EEF2 ,Cell Line ,03 medical and health sciences ,Genetics ,medicine ,Animals ,Humans ,Viability assay ,education ,Molecular Biology ,Dose-Response Relationship, Drug ,biochemical phenomena, metabolism, and nutrition ,Elongation factor ,Disease Models, Animal ,030104 developmental biology ,Multiprotein Complexes ,Protein Biosynthesis ,AMP-Activated Protein Kinases/metabolism ,Cell Death/drug effects ,Cell Death/genetics ,Cell Survival/drug effects ,Cell Survival/genetics ,Drug Resistance/genetics ,Elongation Factor 2 Kinase/genetics ,Elongation Factor 2 Kinase/metabolism ,Multiprotein Complexes/metabolism ,Nelfinavir/chemistry ,Nelfinavir/pharmacology ,Neoplasms/genetics ,Neoplasms/metabolism ,Neoplasms/pathology ,Peptide Elongation Factor 2/metabolism ,TOR Serine-Threonine Kinases/metabolism ,HIV‐protease inhibitors ,cancer ,cell death ,eEF2K ,mRNA translation ,Elongation Factor-2 Kinase - Abstract
Activation of the elongation factor 2 kinase (eEF2K) leads to the phosphorylation and inhibition of the elongation factor eEF2, reducing mRNA translation rates. Emerging evidence indicates that the regulation of factors involved in protein synthesis may be critical for controlling diverse biological processes including cancer progression. Here we show that inhibitors of the HIV aspartyl protease (HIV‐PIs), nelfinavir in particular, trigger a robust activation of eEF2K leading to the phosphorylation of eEF2. Beyond its anti‐viral effects, nelfinavir has antitumoral activity and promotes cell death. We show that nelfinavir‐resistant cells specifically evade eEF2 inhibition. Decreased cell viability induced by nelfinavir is impaired in cells lacking eEF2K. Moreover, nelfinavir‐mediated anti‐tumoral activity is severely compromised in eEF2K‐deficient engrafted tumors in vivo. Our findings imply that exacerbated activation of eEF2K is detrimental for tumor survival and describe a mechanism explaining the anti‐tumoral properties of HIV‐PIs.
- Published
- 2016
26. Purification and characterization of tagless recombinant human elongation factor 2 kinase (eEF-2K) expressed in Escherichia coli
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Kevin N. Dalby, Ashwini K. Devkota, Clint D.J. Tavares, Alexey G. Ryazanov, Austen Riggs, Bulent Ozpolat, Olga Abramczyk, and Benjamin E. Turk
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Elongation Factor 2 Kinase ,Calmodulin ,Molecular Sequence Data ,Biology ,Chromatography, Affinity ,Article ,law.invention ,Thioredoxins ,Peptide Elongation Factor 2 ,law ,Endopeptidases ,Escherichia coli ,TEV protease ,Humans ,Histidine ,Amino Acid Sequence ,Cloning, Molecular ,Phosphorylation ,Kinase activity ,education ,education.field_of_study ,Kinase ,Chromatography, Ion Exchange ,Recombinant Proteins ,Elongation factor ,Kinetics ,Biochemistry ,Protein Biosynthesis ,Chromatography, Gel ,Recombinant DNA ,biology.protein ,Calcium ,Transformation, Bacterial ,Elongation Factor-2 Kinase ,Oligopeptides ,Plasmids ,Biotechnology - Abstract
The eukaryotic elongation factor 2 kinase (eEF-2K) modulates the rate of protein synthesis by impeding the elongation phase of translation by inactivating the eukaryotic elongation factor 2 (eEF-2) via phosphorylation. eEF-2K is known to be activated by calcium and calmodulin, whereas the mTOR and MAPK pathways are suggested to negatively regulate kinase activity. Despite its pivotal role in translation regulation and potential role in tumor survival, the structure, function, and regulation of eEF-2K have not been described in detail. This deficiency may result from the difficulty of obtaining the recombinant kinase in a form suitable for biochemical analysis. Here we report the purification and characterization of recombinant human eEF-2K expressed in the Escherichia coli strain Rosetta-gami 2(DE3). Successive chromatography steps utilizing Ni-NTA affinity, anion-exchange, and gel filtration columns accomplished purification. Cleavage of the thioredoxin-His(6)-tag from the N-terminus of the expressed kinase with TEV protease yielded 9 mg of recombinant (G-D-I)-eEF-2K per liter of culture. Light scattering shows that eEF-2K is a monomer of ∼85 kDa. In vitro kinetic analysis confirmed that recombinant human eEF-2K is able to phosphorylate wheat germ eEF-2 with kinetic parameters comparable to the mammalian enzyme.
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- 2011
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27. Phosphorylation of Annexin A1 by TRPM7 Kinase: A Switch Regulating the Induction of an α-Helix
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Alla S. Kostyukova, Alexey G. Ryazanov, and Maxim V. Dorovkov
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Molecular Sequence Data ,TRPM Cation Channels ,Peptide ,Biology ,Biochemistry ,Article ,Protein Structure, Secondary ,Cell membrane ,03 medical and health sciences ,0302 clinical medicine ,Protein structure ,Serine ,medicine ,Animals ,Amino Acid Sequence ,Phosphorylation ,Ion channel ,Annexin A1 ,030304 developmental biology ,chemistry.chemical_classification ,0303 health sciences ,Kinase ,Cell Membrane ,S100 Proteins ,Peptide Fragments ,Cell biology ,medicine.anatomical_structure ,chemistry ,030220 oncology & carcinogenesis ,Annexin A2 - Abstract
TRPM7 is an unusual bifunctional protein consisting of an α-kinase domain fused to a TRP ion channel. Previously, we have identified annexin A1 as a substrate for TRPM7 kinase and found that TRPM7 phosphorylates annexin A1 at Ser5 within the N-terminal α-helix. Annexin A1 is a Ca(2+)-dependent membrane binding protein, which has been implicated in membrane trafficking and reorganization. The N-terminal tail of annexin A1 can interact with either membranes or S100A11 protein, and it adopts the conformation of an amphipathic α-helix upon these interactions. Moreover, the existing evidence indicates that the formation of an α-helix is essential for these interactions. Here we show that phosphorylation at Ser5 prevents the N-terminal peptide of annexin A1 from adopting an α-helical conformation in the presence of membrane-mimetic micelles as well as phospholipid vesicles. We also show that phosphorylation at Ser5 dramatically weakens the binding of the peptide to S100A11. Our data suggest that phosphorylation at Ser5 regulates the interaction of annexin A1 with membranes as well as S100A11 protein.
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- 2011
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28. TRPM7 kinase activity regulates murine mast cell degranulation
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Susanna, Zierler, Adriana, Sumoza-Toledo, Sayuri, Suzuki, Fionán Ó, Dúill, Lillia V, Ryazanova, Reinhold, Penner, Alexey G, Ryazanov, and Andrea, Fleig
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Enzyme Activation ,Male ,Mice, Inbred C57BL ,Mice ,Molecular and Cellular ,Animals ,TRPM Cation Channels ,Female ,Mice, Transgenic ,Mast Cells ,Cell Degranulation ,Cells, Cultured - Abstract
The Mg(2+) and Ca(2+) conducting transient receptor potential melastatin 7 (TRPM7) channel-enzyme (chanzyme) has been implicated in immune cell function. Mice heterozygous for a TRPM7 kinase deletion are hyperallergic, while mice with a single point mutation at amino acid 1648, silencing kinase activity, are not. As mast cell mediators trigger allergic reactions, we here determine the function of TRPM7 in mast cell degranulation and histamine release. Our data establish that TRPM7 kinase activity regulates mast cell degranulation and release of histamine independently of TRPM7 channel function. Our findings suggest a regulatory role of TRPM7 kinase activity on intracellular Ca(2+) and extracellular Mg(2+) sensitivity of mast cell degranulation.Transient receptor potential melastatin 7 (TRPM7) is a divalent ion channel with a C-terminally located α-kinase. Mice heterozygous for a TRPM7 kinase deletion (TRPM7(+/∆K) ) are hypomagnesaemic and hyperallergic. In contrast, mice carrying a single point mutation at amino acid 1648, which silences TRPM7 kinase activity (TRPM7(KR) ), are not hyperallergic and are resistant to systemic magnesium (Mg(2+) ) deprivation. Since allergic reactions are triggered by mast cell-mediated histamine release, we investigated the function of TRPM7 on mast cell degranulation and histamine release using wild-type (TRPM7(+/+) ), TRPM7(+/∆K) and TRPM7(KR) mice. We found that degranulation and histamine release proceeded independently of TRPM7 channel function. Furthermore, extracellular Mg(2+) assured unperturbed IgE-DNP-dependent exocytosis, independently of TRPM7. However, impairment of TRPM7 kinase function suppressed IgE-DNP-dependent exocytosis, slowed the cellular degranulation rate, and diminished the sensitivity to intracellular calcium (Ca(2+) ) in G protein-induced exocytosis. In addition, G protein-coupled receptor (GPCR) stimulation revealed strong suppression of histamine release, whereas removal of extracellular Mg(2+) caused the phenotype to revert. We conclude that the TRPM7 kinase activity regulates murine mast cell degranulation by changing its sensitivity to intracellular Ca(2+) and affecting granular mobility and/or histamine contents.
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- 2015
29. The Channel Kinases TRPM6 and TRPM7 Are Functionally Nonredundant
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Carsten Schmitz, Xiaoyun Zhao, Anne-Laure Perraud, Bennett Davenport, Maxim V. Dorovkov, and Alexey G. Ryazanov
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Cell division ,TRPM Cation Channels ,Protein Serine-Threonine Kinases ,Biology ,Biochemistry ,Cell Line ,TRPM7 ,TRPM6 ,Extracellular ,Homeostasis ,Humans ,Magnesium ,Phosphorylation ,Molecular Biology ,Ion channel ,Regulation of gene expression ,Kinase ,Cell Membrane ,Genetic Complementation Test ,Cell Biology ,Cell biology ,Ion homeostasis ,Gene Expression Regulation ,Cell Division ,Gene Deletion - Abstract
TRPM7 and its closest homologue, TRPM6, are the only known fusions of an ion channel pore with a kinase domain. Deletion of TRPM7 in DT40 B-lymphocytes causes growth arrest, Mg(2+) deficiency, and cell death within 24-48 h. Amazingly, in analogy to TRPM6-deficient patients who can live a normal life if provided with a Mg(2+)-rich diet, TRPM7-deficient DT40 B-lymphocytes show wild type cell growth if supplied with 5-10 mm Mg(2+) concentrations in their extracellular medium. Here we have investigated the functional relationship between TRPM6 and TRPM7. We show that TRPM7 deficiency in DT40 cells cannot be complemented by heterologously expressed TRPM6. Nevertheless, both channels can influence each other's biological activity. Our data demonstrate that TRPM6 requires TRPM7 for surface expression in HEK-293 cells and also that TRPM6 is capable of cross-phosphorylating TRPM7 as assessed using a phosphothreonine-specific antibody but not vice versa. TRPM6 and TRPM7 coexpression studies in DT40 B-cells indicate that TRPM6 can modulate TRPM7 function. In conclusion, although TRPM6 and TRPM7 are closely related and deficiency in either one of these molecules severely affects Mg(2+) homeostasis regulation, TRPM6 and TRPM7 do not appear to be functionally redundant but rather two unique and essential components of vertebrate ion homeostasis regulation.
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- 2005
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30. Phosphorylation of Annexin I by TRPM7 Channel-Kinase
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Alexey G. Ryazanov and Maxim V. Dorovkov
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Models, Molecular ,Molecular Sequence Data ,TRPM Cation Channels ,Mitogen-activated protein kinase kinase ,Cathepsin D ,Polymerase Chain Reaction ,Biochemistry ,Ion Channels ,Cell Line ,MAP2K7 ,Mice ,Annexin ,Serine ,Animals ,Humans ,Electrophoresis, Gel, Two-Dimensional ,Magnesium ,Trypsin ,ASK1 ,Amino Acid Sequence ,Phosphorylation ,Molecular Biology ,Annexin A1 ,Ions ,Binding Sites ,Sequence Homology, Amino Acid ,MAP kinase kinase kinase ,biology ,Cyclin-dependent kinase 2 ,Membrane Proteins ,Cell Biology ,Recombinant Proteins ,Protein Structure, Tertiary ,Cell biology ,Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization ,Mutagenesis, Site-Directed ,biology.protein ,Calcium ,Electrophoresis, Polyacrylamide Gel ,Cyclin-dependent kinase 9 ,Peptides ,Protein Kinases ,Annexin A2 ,Protein Binding - Abstract
TRPM7 is an unusual bifunctional molecule consisting of a TRP ion channel fused to a protein kinase domain. It has been shown that TRPM7 plays a key role in the regulation of intracellular magnesium homeostasis as well as in anoxic neuronal death. TRPM7 channel has been characterized using electrophysiological techniques; however, the function of the kinase domain is not known and endogenous substrates for the kinase have not been reported previously. Here we have identified annexin 1 as a substrate for TRPM7 kinase. Phosphorylation of annexin 1 by TRPM7 kinase is stimulated by Ca2+ and is dramatically increased in extracts from cells overexpressing TRPM7. Phosphorylation of annexin 1 by TRPM7 kinase occurs at a conserved serine residue (Ser5) located within the N-terminal amphipathic alpha-helix of annexin 1. The N-terminal region plays a crucial role in interaction of annexin 1 with other proteins and membranes, and therefore, phosphorylation of annexin 1 at Ser5 by TRPM7 kinase may modulate function of annexin 1.
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- 2004
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31. Elucidating the role of the TRPM7 alpha-kinase: TRPM7 kinase inactivation leads to magnesium deprivation resistance phenotype in mice
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Zhixian Hu, Lillia V. Ryazanova, Alexey G. Ryazanov, Andrea Fleig, Sayuri Suzuki, and Vladimir Chubanov
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Mutant ,TRPM Cation Channels ,chemistry.chemical_element ,Biology ,medicine.disease_cause ,Article ,Mice ,03 medical and health sciences ,0302 clinical medicine ,TRPM7 ,medicine ,Animals ,Magnesium ,Kinase activity ,030304 developmental biology ,0303 health sciences ,Multidisciplinary ,Kinase ,Fibroblasts ,Embryo, Mammalian ,Mice, Mutant Strains ,Protein Structure, Tertiary ,3. Good health ,Cell biology ,Oxidative Stress ,Protein kinase domain ,chemistry ,Biochemistry ,Magnesium Deficiency ,Protein Kinases ,030217 neurology & neurosurgery ,Oxidative stress ,Homeostasis - Abstract
TRPM7 is an unusual bi-functional protein containing an ion channel covalently linked to a protein kinase domain. TRPM7 is implicated in regulating cellular and systemic magnesium homeostasis. While the biophysical properties of TRPM7 ion channel and its function are relatively well characterized, the function of the TRPM7 enzymatically active kinase domain is not understood yet. To investigate the physiological role of TRPM7 kinase activity, we constructed mice carrying an inactive TRPM7 kinase. We found that these mice were resistant to dietary magnesium deprivation, surviving three times longer than wild type mice; also they displayed decreased chemically induced allergic reaction. Interestingly, mutant mice have lower magnesium bone content compared to wild type mice when fed regular diet; unlike wild type mice, mutant mice placed on magnesium-depleted diet did not alter their bone magnesium content. Furthermore, mouse embryonic fibroblasts isolated from TRPM7 kinase-dead animals exhibited increased resistance to magnesium deprivation and oxidative stress. Finally, electrophysiological data revealed that the activity of the kinase-dead TRPM7 channel was not significantly altered. Together, our results suggest that TRPM7 kinase is a sensor of magnesium status and provides coordination of cellular and systemic responses to magnesium deprivation.
- Published
- 2014
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32. Identification of a Mg2+-sensitive ORF in the 5'-leader of TRPM7 magnesium channel mRNA
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Konstantin S. Vassilenko, Inna A. Nikonorova, Alexey G. Ryazanov, Sergey E. Dmitriev, and Nikolay V. Kornakov
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TRPM Cation Channels ,Biology ,Conserved sequence ,03 medical and health sciences ,Open Reading Frames ,0302 clinical medicine ,Upstream open reading frame ,Gene expression ,Genetics ,Protein biosynthesis ,Humans ,Magnesium ,Conserved Sequence ,030304 developmental biology ,Regulation of gene expression ,0303 health sciences ,Messenger RNA ,Base Sequence ,Translation (biology) ,Molecular biology ,Cell biology ,Open reading frame ,HEK293 Cells ,Gene Expression Regulation ,Protein Biosynthesis ,RNA ,5' Untranslated Regions ,030217 neurology & neurosurgery - Abstract
TRPM7 is an essential and ubiquitous channel-kinase regulating cellular influx of Mg2+. Although TRPM7 mRNA is highly abundant, very small amount of the protein is detected in cells, suggesting post-transcriptional regulation of trpm7 gene expression. We found that TRPM7 mRNA 5′-leader contains two evolutionarily conserved upstream open reading frames that act together to drastically inhibit translation of the TRPM7 reading frame at high magnesium levels and ensure its optimal translation at low magnesium levels, when the activity of the channel-kinase is most required. The study provides the first example of magnesium channel synthesis being controlled by Mg2+ in higher eukaryotes.
- Published
- 2014
33. Germline quality control: eEF2K stands guard to eliminate defective oocytes
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Jason Jay Merkin, Ronald E. Ellis, Maxim V. Dorovkov, Alexandra L. Nguyen, Hsueh-Ping Chu, James S. Novak, Robert G. Nagele, Yuriy Shymkiv, Bart P. Braeckman, David E. Harrison, Zhixian Hu, Peter M. Clifford, Alexey G. Ryazanov, and Yi Liao
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Elongation Factor 2 Kinase ,Male ,Quality Control ,Programmed cell death ,Blotting, Western ,Apoptosis ,General Biochemistry, Genetics and Molecular Biology ,Germline ,Article ,Immunoenzyme Techniques ,Mice ,medicine ,In Situ Nick-End Labeling ,Animals ,Phosphorylation ,Caenorhabditis elegans ,Molecular Biology ,Cells, Cultured ,Mice, Knockout ,biology ,Ovary ,Embryo ,Cell Biology ,Fibroblasts ,Oocyte ,biology.organism_classification ,Embryo, Mammalian ,Embryonic stem cell ,XIAP ,Cell biology ,medicine.anatomical_structure ,Germ Cells ,Caspases ,NIH 3T3 Cells ,Oocytes ,Female ,Germ cell ,Developmental Biology - Abstract
SummaryThe control of germline quality is critical to reproductive success and survival of a species; however, the mechanisms underlying this process remain unknown. Here, we demonstrate that elongation factor 2 kinase (eEF2K), an evolutionarily conserved regulator of protein synthesis, functions to maintain germline quality and eliminate defective oocytes. We show that disruption of eEF2K in mice reduces ovarian apoptosis and results in the accumulation of aberrant follicles and defective oocytes at advanced reproductive age. Furthermore, the loss of eEF2K in Caenorhabditis elegans results in a reduction of germ cell death and significant decline in oocyte quality and embryonic viability. Examination of the mechanisms by which eEF2K regulates apoptosis shows that eEF2K senses oxidative stress and quickly downregulates short-lived antiapoptotic proteins, XIAP and c-FLIPL by inhibiting global protein synthesis. These results suggest that eEF2K-mediated inhibition of protein synthesis renders cells susceptible to apoptosis and functions to eliminate suboptimal germ cells.
- Published
- 2014
34. [Untitled]
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and Alexey N. Petrov, Alexey G. Ryazanov, Karen S. Pavur, Lillia V. Ryazanova, and Maxim V. Dorovkov
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Cell signaling ,Biochemistry ,biology ,Structural Biology ,Kinase ,Mitogen-activated protein kinase ,Biophysics ,biology.protein ,ASK1 ,c-Raf ,Threonine ,Protein kinase A ,SH3 domain - Abstract
Recently we identified a new class of protein kinases with a novel type of catalytic domain structurally and evolutionarily unrelated to the conventional eukaryotic protein kinases. This new class, which we named alpha-kinases, is represented by eukaryotic elongation factor-2 kinase and the Dictyosteliummyosin heavy chain kinases. Here we cloned, sequenced, and analyzed the tissue distribution of five new putative mammalian α-kinases: melanoma α-kinase, kidney α-kinase, heart α-kinase, skeletal muscle α-kinase, and lymphocyte α-kinase. All five are large proteins of more than 1000 amino acids with an α-kinase catalytic domain located in the carboxyterminal part. We expressed the catalytic domain of melanoma α-kinase in Escherichia coli, and found that it autophosphorylates at threonine residues, demonstrating that it is a genuine protein kinase. Unexpectedly, we found that long aminoterminal portions of melanoma and kidney α-kinases represent new members of the TRP ion channel family, which are thought to mediate the capacitative Ca2+entry in nonexcitable mammalian cells. This suggests that melanoma and kidney α-kinases, which represent a novel type of signaling molecule, are involved in the regulation of Ca2+influx in mammalian cells.
- Published
- 2001
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35. Mapping the Functional Domains of Elongation Factor-2 Kinase
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Alexey G. Ryazanov, and Alexey N. Petrov, and Karen S. Pavur
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Elongation Factor 2 Kinase ,Molecular Sequence Data ,Peptide Mapping ,Biochemistry ,Substrate Specificity ,Protein structure ,Calmodulin ,Peptide Elongation Factor 2 ,Humans ,Amino Acid Sequence ,Kinase activity ,education ,Protein kinase A ,Peptide sequence ,Sequence Deletion ,chemistry.chemical_classification ,education.field_of_study ,Kinase ,Recombinant Proteins ,Protein Structure, Tertiary ,Amino acid ,Enzyme Activation ,chemistry ,Calcium-Calmodulin-Dependent Protein Kinases ,Mutagenesis, Site-Directed ,Translational elongation ,Elongation Factor-2 Kinase ,Peptides ,Protein Binding - Abstract
A new class of eukaryotic protein kinases that are not homologous to members of the serine/threonine/tyrosine protein kinase superfamily was recently identified [Futey, L. M., et al. (1995) J. Biol. Chem. 270, 523-529; Ryazanov, A. G., et al. (1997) Proc. Natl. Acad. Sci. U.S.A. 94, 4884-4889]. This class includes eukaryotic elongation factor-2 kinase, Dictyostelium myosin heavy chain kinases A, B, and C, and several mammalian putative protein kinases that are not yet fully characterized [Ryazanov, A. G., et al. (1999) Curr. Biol. 9, R43-R45]. eEF-2 kinase is a ubiquitous protein kinase that phosphorylates and inactivates eukaryotic translational elongation factor-2, and thus can modulate the rate of polypeptide chain elongation during translation. eEF-2 was the only known substrate for eEF-2 kinase. We demonstrate here that eEF-2 kinase can efficiently phosphorylate a 16-amino acid peptide, MH-1, corresponding to the myosin heavy chain kinase A phosphorylation site in Dictyostelium myosin heavy chains. This enabled us to develop a rapid assay for eEF-2 kinase activity. To localize the functional domains of eEF-2 kinase, we expressed human eEF-2 kinase in Escherichia coli as a GST-tagged fusion protein, and then performed systematic in vitro deletion mutagenesis. We analyzed eEF-2 kinase deletion mutants for the ability to autophosphorylate, and to phosphorylate eEF-2 as well as a peptide substrate, MH-1. Mutants with deletions between amino acids 51 and 335 were unable to autophosphorylate, and were also unable to phosphorylate eEF-2 and MH-1. Mutants with deletions between amino acids 521 and 725 were unable to phosphorylate eEF-2, but were still able to autophosphorylate and to phosphorylate MH-1. The kinases with deletions between amino acids 2 and 50 and 336 and 520 were able to catalyze all three reactions. In addition, the C-terminal domain expressed alone (amino acids 336-725) binds eEF-2 in a coprecipitation assay. These results suggest that eEF-2 kinase consists of two domains connected by a linker region. The amino-terminal domain contains the catalytic domain, while the carboxyl-terminal domain contains the eEF-2 targeting domain. The calmodulin-binding region is located between amino acids 51 and 96. The amino acid sequence of the carboxyl-terminal domain of eEF-2 kinase displays similarity to several proteins, all of which contain repeats of a 36-amino acid motif that we named "motif 36".
- Published
- 2000
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36. Heritable and inducible genetic interference by double-stranded RNA encoded by transgenes
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Shiliang Wang, Maxim V. Dorovkov, Nektarios Tavernarakis, Alexey G. Ryazanov, and Monica Driscoll
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Recombinant Fusion Proteins ,Green Fluorescent Proteins ,Mutant ,Animals, Genetically Modified ,RNA interference ,Gene expression ,Genetics ,Animals ,Caenorhabditis elegans ,Caenorhabditis elegans Proteins ,Promoter Regions, Genetic ,Gene ,Genes, Helminth ,Heat-Shock Proteins ,RNA, Double-Stranded ,Regulation of gene expression ,biology ,RNA ,Helminth Proteins ,biology.organism_classification ,Luminescent Proteins ,RNA silencing ,Gene Expression Regulation ,Nucleic Acid Conformation - Abstract
Double-stranded RNA interference (RNAi) is an effective method for disrupting expression of specific genes in Caenorhabditis elegans and other organisms. Applications of this reverse-genetics tool, however, are somewhat restricted in nematodes because introduced dsRNA is not stably inherited. Another difficulty is that RNAi disruption of late-acting genes has been generally less consistent than that of embryonically expressed genes, perhaps because the concentration of dsRNA becomes lower as cellular division proceeds or as developmental time advances. In particular, some neuronally expressed genes appear refractory to dsRNA-mediated interference. We sought to extend the applicability of RNAi by in vivo expression of heritable inverted-repeat (IR) genes. We assayed the efficacy of in vivo-driven RNAi in three situations for which heritable, inducible RNAi would be advantageous: (i) production of large numbers of animals deficient for gene activities required for viability or reproduction; (ii) generation of large populations of phenocopy mutants for biochemical analysis; and (iii) effective gene inactivation in the nervous system. We report that heritable IR genes confer potent and specific gene inactivation for each of these applications. We suggest that a similar strategy might be used to test for dsRNA interference effects in higher organisms in which it is feasible to construct transgenic animals, but impossible to directly or transiently introduce high concentrations of dsRNA.
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- 2000
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37. Identification of a new class of protein kinases represented by eukaryotic elongation factor-2 kinase
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Toni Gestone Parmer, F. Joseph Germino, Maxim V. Dorovkov, Hediye Erdjument-Bromage, Charmaine E. Mendola, Paul Tempst, Michael D. Ward, Karen S. Pavur, William N. Hait, C. Robert Prostko, Martin Wiedmann, and Alexey G. Ryazanov
- Subjects
Elongation Factor 2 Kinase ,Reticulocytes ,Transcription, Genetic ,Molecular Sequence Data ,Protozoan Proteins ,Biology ,Polymerase Chain Reaction ,SH3 domain ,MAP2K7 ,Mice ,Adenosine Triphosphate ,Animals ,Humans ,Dictyostelium ,Amino Acid Sequence ,c-Raf ,Cloning, Molecular ,Caenorhabditis elegans ,education ,Conserved Sequence ,DNA Primers ,education.field_of_study ,Binding Sites ,Multidisciplinary ,Base Sequence ,Sequence Homology, Amino Acid ,Cyclin-dependent kinase 2 ,Biological Sciences ,Recombinant Proteins ,Rats ,Biochemistry ,Protein Biosynthesis ,Calcium-Calmodulin-Dependent Protein Kinases ,biology.protein ,Cyclin-dependent kinase complex ,Rabbits ,Elongation Factor-2 Kinase ,Cyclin-dependent kinase 7 ,Casein kinase 2 - Abstract
The several hundred members of the eukaryotic protein kinase superfamily characterized to date share a similar catalytic domain structure, consisting of 12 conserved subdomains. Here we report the existence and wide occurrence in eukaryotes of a protein kinase with a completely different structure. We cloned and sequenced the human, mouse, rat, and Caenorhabditis elegans eukaryotic elongation factor-2 kinase (eEF-2 kinase) and found that with the exception of the ATP-binding site, they do not contain any sequence motifs characteristic of the eukaryotic protein kinase superfamily. Comparison of different eEF-2 kinase sequences reveals a highly conserved region of ≈200 amino acids which was found to be homologous to the catalytic domain of the recently described myosin heavy chain kinase A (MHCK A) from Dictyostelium. This suggests that eEF-2 kinase and MHCK A are members of a new class of protein kinases with a novel catalytic domain structure.
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- 1997
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38. Abstract 4: Transient Receptor Potential Melastatin 7 Cation Channel (TRPM7) Kinase Domain - a New Player in Angiotensin II-induced Hypertension and Cardiac Hypertrophy
- Author
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Tayze T Antunes, Glaucia E Callera, Ying He, Alexey G Ryazanov, Lilian V Ryazanova, and Rhian M Touyz
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Internal Medicine - Abstract
Transient receptor potential melastatin 7 (TRPM7) cation channel is a unique protein that has the dual ability to act as a channel to regulate transmembrane Mg 2+ transport and also as a kinase to promote cellular signaling. Despite increasing awareness of the importance of Mg 2+ in cardiovascular biology nothing is known about TRPM7 and its kinase domain in the pathophysiology of hypertension. We previously demonstrated that Ang II regulates TRPM7 in vitro . Here we studied TRPM7 kinase-deficient mice to explore the role of the TRPM7 kinase domain in Ang II-induced hypertension. TRPM7 kinase deficient mice (TRPM7 +/- ) and wild type (WT) counterparts were infused with Ang II (400 ng/kg/min; minipumps) for 4 weeks. Blood pressure (BP) was measured by tail cuff. Vascular reactivity and structure studies were performed by myography in mesenteric arteries. Although baseline BP tended to be higher in TRPM7 +/- versus WT mice (127 ± 6.0 vs 119 ± 2.2 mmHg), significance was not achieved. TRPM7 +/- mice displayed earlier onset of BP increase by Ang II (2 weeks; WT-Ang II: 145 ± 5 vs TRPM7 +/- Ang II: 178 ± 9; mmHg). After 4 weeks, BP was significantly higher in TRPM7 +/- (174 ± 10 mmHg) than in WT mice (147 ± 8 mmHg). Ang II-induced hypertension was associated with cardiac hypertrophy, an effect that was exaggerated in TRPM7 +/- mice (WT: 4.4 ± 0.1; WT-Ang II: 5.0 ± 0.2; TRPM7 +/- : 4.5 ± 0.1; TRPM7 +/- Ang II: 5.7 ± 0.1 g/body weight). Mesenteric arteries from Ang II-infused TRPM7 +/- mice exhibited decreased sensitivity to acetylcholine (pD2; WT-Ang II: 7.6 ± 0.3 vs. TRPM7 +/- Ang II: 6.7 ± 0.4), and reduced maximal relaxation compared to WT mice (WT-Ang II: 88 ± 8% vs TRPM7 +/- Ang II: 59 ± 10%). Ang II induced a leftward shift in the stress-strain relationship for both WT and TRPM7 +/- mice in a similar fashion. Plasma analysis revealed that TRPM7 +/- mice were hypomagnesemic, and that Ang II increased Mg 2+ levels to a greater extent in WT than in TRPM7 +/- mice (WT: 0.65 ± 0.02; WT-Ang II: 0.74 ± 0.04; TRPM7 +/- : 0.60 ± 0.01; TRPM7 +/- Ang II: 0.64 ± 0.02; mmol/L). In conclusion, our findings demonstrate that hypertension, cardiac hypertrophy and endothelial dysfunction are exaggerated by Ang II in TRPM7 +/- hypomagnesemic mice, suggesting a novel role for TRPM7 kinase domain in cardiovascular pathophysiology.
- Published
- 2013
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39. Acute suppression of spontaneous neurotransmission drives synaptic potentiation
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Anita E. Autry, Ege T. Kavalali, Lisa M. Monteggia, Kristen L. Szabla, Alexey G. Ryazanov, and Elena Nosyreva
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Patch-Clamp Techniques ,Time Factors ,Nonsynaptic plasticity ,Hippocampus ,Synaptic Transmission ,GABA Antagonists ,Rats, Sprague-Dawley ,Mice ,Excitatory Amino Acid Agonists ,Picrotoxin ,Enzyme Inhibitors ,Evoked Potentials ,Mice, Knockout ,Synaptic scaling ,Neuronal Plasticity ,Chemistry ,General Neuroscience ,Inhibition, Psychological ,Ketamine ,Synaptic signaling ,Locomotion ,Sodium Channel Blockers ,Elongation Factor 2 Kinase ,Biophysics ,Glutamic Acid ,Tetrodotoxin ,Neurotransmission ,In Vitro Techniques ,Article ,Synaptic augmentation ,Metaplasticity ,Animals ,Receptors, AMPA ,Swimming ,Analysis of Variance ,Brain-Derived Neurotrophic Factor ,Excitatory Postsynaptic Potentials ,Neural Inhibition ,Feeding Behavior ,Electric Stimulation ,Rats ,Synaptic fatigue ,nervous system ,Animals, Newborn ,Gene Expression Regulation ,Synaptic plasticity ,Synapses ,Exploratory Behavior ,Neuroscience ,Excitatory Amino Acid Antagonists - Abstract
The impact of spontaneous neurotransmission on neuronal plasticity remains poorly understood. Here, we show that acute suppression of spontaneous N-methyl-D-aspartate (NMDA) receptor-mediated neurotransmission potentiates synaptic responses in the CA1 regions of rat and mouse hippocampus. This potentiation requires protein synthesis, brain-derived neurotrophic factor (BDNF) expression, eukaryotic elongation factor-2 kinase (eEF2K) function and increased surface expression of 2-amino-3-(3-hydroxy-5-methyl-isoxazol-4-yl)propanoic acid (AMPA) receptors. Our behavioral studies link this same synaptic signaling pathway to the fast-acting antidepressant responses elicited by ketamine. We also show that selective neurotransmitter depletion from spontaneously recycling vesicles triggers synaptic potentiation via the same pathway as NMDA receptor blockade, demonstrating that presynaptic impairment of spontaneous release, without manipulation of evoked neurotransmission, is sufficient to elicit postsynaptic plasticity. These findings uncover an unexpectedly dynamic impact of spontaneous glutamate release on synaptic efficacy and provide new insight into a key synaptic substrate for rapid antidepressant action.
- Published
- 2013
40. Construction of human activity-based phosphorylation networks
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Jiang Qian, Shuli Xia, Xinxin Gao, Jun Seop Jeong, Seth Blackshaw, Kevin N. Dalby, Jianfei Hu, Hongkai Ji, Stephen Desiderio, Woochang Hwang, Anne-Claude Gingras, Hillary M. Clark, George Wu, Akhilesh Pandey, Christopher D.O. Cooper, Benjamin E. Turk, Stefan Knapp, Hee Sool Rho, Matthew D. Shirley, Alexey G. Ryazanov, Robert H. Newman, Jin-Peng Zhang, Zhi Xie, Shaohui Hu, Heng Zhu, Philip A. Cole, Morris J. Birnbaum, Jimmy Lin, Donald J. Zack, Qiang Ni, Tony Pawson, John Neiswinger, Crystal Woodard, and Renu Goel
- Subjects
inorganic chemicals ,Cell signaling ,Systems biology ,Molecular Sequence Data ,Protein Array Analysis ,Receptors, Antigen, B-Cell ,signaling networks ,macromolecular substances ,Biology ,environment and public health ,Article ,General Biochemistry, Genetics and Molecular Biology ,03 medical and health sciences ,0302 clinical medicine ,Agammaglobulinaemia Tyrosine Kinase ,Humans ,Bruton's tyrosine kinase ,Amino Acid Sequence ,Protein Interaction Maps ,030304 developmental biology ,B-Lymphocytes ,0303 health sciences ,General Immunology and Microbiology ,phosphorylation ,Kinase ,Applied Mathematics ,Bayes Theorem ,systems biology ,Protein-Tyrosine Kinases ,Cyclic AMP-Dependent Protein Kinases ,Cell biology ,enzymes and coenzymes (carbohydrates) ,Computational Theory and Mathematics ,030220 oncology & carcinogenesis ,biology.protein ,bacteria ,Tyrosine ,Phosphorylation ,Signal transduction ,DNA microarray ,General Agricultural and Biological Sciences ,Tyrosine kinase ,Algorithms ,Signal Transduction ,Information Systems - Abstract
A high-resolution map of human phosphorylation networks was constructed by integrating experimentally determined kinase-substrate relationships with other resources, such as in vivo phosphorylation sites., High-quality kinase-substrate relationships (KSRs) were determined using an integrated approach that combines protein microarray technology and bioinformatics analysis. Phosphorylation motifs were predicted for 284 human kinases, representing 55% of the human kinome. A high-resolution map of human phosphorylation networks was constructed that connects 230 kinases to 2591 in vivo phosphorylation sites in 652 substrates. A new role for PKA downstream of Btk (Bruton's tyrosine kinase) during B-cell receptor signaling was discovered based on KSRs identified in the phosphorylation networks., The landscape of human phosphorylation networks has not been systematically explored, representing vast, unchartered territories within cellular signaling networks. Although a large number of in vivo phosphorylated residues have been identified by mass spectrometry (MS)-based approaches, assigning the upstream kinases to these residues requires biochemical analysis of kinase-substrate relationships (KSRs). Here, we developed a new strategy, called CEASAR, based on functional protein microarrays and bioinformatics to experimentally identify substrates for 289 unique kinases, resulting in 3656 high-quality KSRs. We then generated consensus phosphorylation motifs for each of the kinases and integrated this information, along with information about in vivo phosphorylation sites determined by MS, to construct a high-resolution map of phosphorylation networks that connects 230 kinases to 2591 in vivo phosphorylation sites in 652 substrates. The value of this data set is demonstrated through the discovery of a new role for PKA downstream of Btk (Bruton's tyrosine kinase) during B-cell receptor signaling. Overall, these studies provide global insights into kinase-mediated signaling pathways and promise to advance our understanding of cellular signaling processes in humans.
- Published
- 2013
41. Abstract 218: TRPM7 Kinase - A Novel Signaling Pathway for Ang II-induced MAPK Activation in Vascular Smooth Muscle Cells
- Author
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Tayze T Antunes, Alvaro Yogi, Ying He, Glaucia E Callera, Augusto C Montezano, Alexey G Ryazanov, Lillia V Ryazanova, and Rhian M Touyz
- Subjects
cardiovascular system ,Internal Medicine - Abstract
Transient receptor potential melastatin 7 (TRPM7) cation channel is a unique protein, which regulates transmembrane magnesium (Mg2+) transport through its channel domain, and intracellular signaling through its kinase domain. We previously demonstrated that TRPM7, is expressed on vascular smooth muscle cells (VSMC), controls Mg2+ influx, and is regulated by angiotensin II (Ang II). Low Mg2+ levels are among the many factors leading to hypertension, where intracellular Mg2+ deficiency and TRPM7 downregulation is observed. Despite the advancement in the understanding of Mg2+ and TRPM7 biology, the role of TRPM7, and its kinase, in hypertension remains elusive. In this study, we investigated whether deletion of TRPM7 kinase domain alters Ang II-induced Mg2+ influx and signaling in VSMCs. Cultured VSMCs from mesenteric arteries obtained from heterozygous mice for the TRPM7 kinase deletion (+/-) and WT mice were used. Mg2+ influx was assessed by fluorescence microscopy. Activation of MAP kinases was evaluated by immunoblotting. Ang II (10-7M) increase in Mg2+ influx was similar in VSMC from both, WT and TRPM7+/- mice (2.5-fold; p
- Published
- 2012
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42. The Emerging Role of TRPM7 in the Regulation of Magnesium Homeostasis
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Alexey G. Ryazanov, Vladimir Chubanov, Jonathan T. Eggenschwiler, Lillia V. Ryazanova, and Thomas Gudermann
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Chemistry ,TRPM7 ,Magnesium ,chemistry.chemical_element ,Homeostasis ,Cell biology - Published
- 2012
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43. Proteomic Evaluation and Validation of Cathepsin D Regulated Proteins in Macrophages Exposed to Streptococcus pneumoniae
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Hseuh-Ping Chu, Alexey G. Ryazanov, Trong Khoa Pham, Robert C. Read, Moira K. B. Whyte, Phillip C. Wright, Martin A. Bewley, Helen M. Marriott, Saw Yen Ow, Benny Chain, Josselin Noirel, and David H. Dockrell
- Subjects
Proteome ,SUPEROXIDE ANION ,Colony Count, Microbial ,Cathepsin D ,Cell Cycle Proteins ,Cathepsin E ,Endoplasmic Reticulum ,Mitochondrial Membrane Transport Proteins ,Biochemistry ,Cathepsin B ,S100 Calcium Binding Protein A6 ,Analytical Chemistry ,Mice ,0302 clinical medicine ,Cathepsin H ,Cathepsin L1 ,Pepstatins ,INFECTION ,Endoplasmic Reticulum Chaperone BiP ,Lung ,Heat-Shock Proteins ,Cathepsin S ,Membrane Potential, Mitochondrial ,Mice, Knockout ,0303 health sciences ,biology ,S100 Proteins ,MITOCHONDRIAL-MEMBRANE ,APOPTOSIS ,Streptococcus pneumoniae ,030220 oncology & carcinogenesis ,Female ,Elongation Factor 2 Kinase ,Cell Line ,PROGRAMMED CELL-DEATH ,03 medical and health sciences ,Mitochondrial membrane transport protein ,Animals ,Humans ,Protease Inhibitors ,Molecular Biology ,Gelsolin ,Enzyme Assays ,030304 developmental biology ,Cathepsin ,NITRIC-OXIDE ,INTERFERON-GAMMA ,Superoxide Dismutase ,Macrophages ,Research ,Molecular biology ,TRANSCRIPTOME ANALYSIS ,Mice, Inbred C57BL ,Oxidative Stress ,Gene Expression Regulation ,biology.protein ,MONONUCLEAR PHAGOCYTES ,REACTIVE OXYGEN ,Apoptosis Regulatory Proteins ,Reactive Oxygen Species - Abstract
Macrophages are central effectors of innate immune responses to bacteria. We have investigated how activation of the abundant macrophage lysosomal protease, cathepsin D, regulates the macrophage proteome during killing of Streptococcus pneumoniae. Using the cathepsin D inhibitor pepstatin A, we demonstrate that cathepsin D differentially regulates multiple targets out of 679 proteins identified and quantified by eight-plex isobaric tag for relative and absolute quantitation. Our statistical analysis identified 18 differentially expressed proteins that passed all paired t-tests (alpha = 0.05). This dataset was enriched for proteins regulating the mitochondrial pathway of apoptosis or inhibiting competing death programs. Five proteins were selected for further analysis. Western blotting, followed by pharmacological inhibition or genetic manipulation of cathepsin D, verified cathepsin D-dependent regulation of these proteins, after exposure to S. pneumoniae. Superoxide dismutase-2 up-regulation was temporally related to increased reactive oxygen species generation. Gelsolin, a known regulator of mitochondrial outer membrane permeabilization, was down-regulated in association with cytochrome c release from mitochondria. Eukaryotic elongation factor (eEF2), a regulator of protein translation, was also down-regulated by cathepsin D. Using absence of the negative regulator of eEF2, eEF2 kinase, we confirm that eEF2 function is required to maintain expression of the anti-apoptotic protein Mcl-1, delaying macrophage apoptosis and confirm using a murine model that maintaining eEF2 function is associated with impaired macrophage apoptosis-associated killing of Streptococcus pneumoniae. These findings demonstrate that cathepsin D regulates multiple proteins controlling the mitochondrial pathway of macrophage apoptosis or competing death processes, facilitating intracellular bacterial killing. Molecular & Cellular Proteomics 10: 10.1074/mcp.M111.008193, 1-14, 2011.
- Published
- 2011
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44. [Untitled]
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Alexey G. Ryazanov
- Subjects
Biochemistry ,Structural Biology ,media_common.quotation_subject ,Biophysics ,Longevity ,Protein turnover ,Biology ,Ribosome ,Human genetics ,media_common - Abstract
Proteins in cells are constantly undergoing damage. Nevertheless, the concentration of damaged proteins in young organisms is maintained at a low level owing to the continual protein turnover: breakdown of damaged proteins and synthesis of new ones. During aging, the concentration of damaged proteins increases because of decelerating protein turnover, the cause of which is unknown; however, it may be related to the decrease in ribosome concentration.
- Published
- 2001
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45. The channel-kinase TRPM7 regulates phosphorylation of the translational factor eEF2 via eEF2-k
- Author
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Carsten Schmitz, Anne-Laure Perraud, Alexey G. Ryazanov, and Xiaoyun Zhao
- Subjects
inorganic chemicals ,Elongation Factor 2 Kinase ,Peptide Chain Elongation, Translational ,TRPM Cation Channels ,Biology ,Protein Serine-Threonine Kinases ,EEF2 ,Article ,Cell Line ,Mice ,Peptide Elongation Factor 2 ,TRPM7 ,Ca2+/calmodulin-dependent protein kinase ,Animals ,Humans ,Magnesium ,Phosphorylation ,Cyclin-dependent kinase 1 ,B-Lymphocytes ,Kinase ,Cell Biology ,Recombinant Proteins ,Cell biology ,Elongation factor ,Protein kinase domain ,Biochemistry ,Protein Biosynthesis ,Chickens - Abstract
Protein translation is an essential but energetically expensive process, which is carefully regulated in accordance to the cellular nutritional and energy status. Eukaryotic elongation factor 2 (eEF2) is a central regulation point since it mediates ribosomal translocation and can be inhibited by phosphorylation at Thr56. TRPM7 is the unique fusion of an ion channel with a functional Ser/Thr-kinase. While TRPM7's channel function has been implicated in regulating vertebrate Mg2+ uptake required for cell growth, the function of its kinase domain remains unclear. Here, we show that under conditions where cell growth is limited by Mg2+ availability, TRPM7 via its kinase mediates enhanced Thr56 phosphorylation of eEF2. TRPM7-kinase does not appear to directly phosphorylate eEF2, but rather to influence the amount of eEF2's cognate kinase eEF2-k, involving its phosphorylation at Ser77. These findings suggest that TRPM7's structural duality ensures ideal positioning of its kinase in close proximity to channel-mediated Mg2+ uptake, allowing for the adjustment of protein translational rates to the availability of Mg2+.
- Published
- 2010
46. Resveratrol regulates pathologic angiogenesis by a eukaryotic elongation factor-2 kinase-regulated pathway
- Author
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Jennifer Kelly, Rajendra S. Apte, Dru S. Dace, Alexey G. Ryazanov, and Aslam A. Khan
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Elongation Factor 2 Kinase ,Angiogenesis ,Biology ,Resveratrol ,Eye ,Pathology and Forensic Medicine ,chemistry.chemical_compound ,Mice ,Sirtuin 1 ,Cell Movement ,Stilbenes ,Animals ,education ,Cells, Cultured ,Cell Proliferation ,Mice, Knockout ,education.field_of_study ,Neovascularization, Pathologic ,Kinase ,Lasers ,Adenylate Kinase ,Endothelial Cells ,Antineoplastic Agents, Phytogenic ,Cell biology ,Elongation factor ,Mice, Inbred C57BL ,Biochemistry ,chemistry ,Sirtuin ,biology.protein ,Elongation Factor-2 Kinase ,Signal transduction ,Signal Transduction ,Regular Articles - Abstract
Abnormal angiogenesis is central to the pathophysiology of diverse disease processes including cancers, ischemic and atherosclerotic heart disease, and visually debilitating eye disease. Resveratrol is a naturally occurring phytoalexin that has been demonstrated to ameliorate and decelerate the aging process as well as blunt end organ damage from obesity. These effects of resveratrol are largely mediated by members of the sirtuin family of proteins. We demonstrate that resveratrol can inhibit pathological angiogenesis in vivo and in vitro by a sirtuin-independent pathway. Resveratrol inhibits the proliferation and migration of vascular endothelial cells by activating eukaryotic elongation factor-2 kinase. The active kinase in turn phosphorylates and inactivates elongation factor-2, a key mediator of ribosomal transfer and protein translation. Functional inhibition of the kinase by gene deletion in vivo or RNA as well as pharmacological inhibition in vitro is able to completely reverse the effects of resveratrol on blood vessel growth. These studies have identified a novel and critical pathway that promotes aberrant vascular proliferation and one that is amenable to modulation by pharmacological means. In addition, these results have uncovered a sirtuin-independent pathway by which resveratrol regulates angiogenesis.
- Published
- 2010
47. TRPM7 is essential for Mg2+ homeostasis in mammals
- Author
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Joanna Galli, Zhixian Hu, Alexey G. Ryazanov, Andrzej Mazur, Lillia V. Ryazanova, Susanna Zierler, Andrea Fleig, Lusliany J. Rondon, Terry P. Yamaguchi, University of Medecine and Dentistry of New Jersey, Partenaires INRAE, Unité de Nutrition Humaine (UNH), Institut National de la Recherche Agronomique (INRA)-Université d'Auvergne - Clermont-Ferrand I (UdA)-Clermont Université, Université d'Auvergne - Clermont-Ferrand I (UdA), University of Hawaii, Wroclaw University of Environmental and Life Sciences, NCI, NIH [P01GM078195], and Austrian Science Fund (F.W.F.) [J2784]
- Subjects
CURRENTS ,PROTEIN-KINASES ,[SDV]Life Sciences [q-bio] ,General Physics and Astronomy ,chemistry.chemical_element ,ION-CHANNEL ,Bioinformatics ,Article ,General Biochemistry, Genetics and Molecular Biology ,Cofactor ,03 medical and health sciences ,0302 clinical medicine ,SECONDARY HYPOCALCEMIA ,DOMAIN ,TRPM7 ,TRPM6 ,HYPOMAGNESEMIA ,CELL ,ALPHA-KINASES ,MUTATION ,030304 developmental biology ,chemistry.chemical_classification ,0303 health sciences ,Multidisciplinary ,biology ,Kinase ,Magnesium ,General Chemistry ,3. Good health ,Cell biology ,Enzyme ,chemistry ,Protein kinase domain ,MAGNESIUM ,biology.protein ,030217 neurology & neurosurgery ,Homeostasis - Abstract
Mg2+ is the second-most abundant cation in animal cells and is an essential cofactor in numerous enzymatic reactions. The molecular mechanisms controlling Mg2+ balance in the organism are not well understood. In this study, we report identification of TRPM7, a bifunctional protein containing a protein kinase fused to an ion channel, as a key regulator of whole body Mg2+ homeostasis in mammals. We generated TRPM7-deficient mice with the deletion of the kinase domain. Homozygous TRPM7Δkinase mice demonstrated early embryonic lethality, whereas heterozygous mice were viable, but developed signs of hypomagnesaemia and revealed a defect in intestinal Mg2+ absorption. Cells derived from heterozygous TRPM7Δkinase mice demonstrated reduced TRPM7 currents that had increased sensitivity to the inhibition by Mg2+. Embryonic stem cells lacking TRPM7 kinase domain displayed a proliferation arrest phenotype that can be rescued by Mg2+ supplementation. Our results demonstrate that TRPM7 is essential for the control of cellular and whole body Mg2+ homeostasis., Magnesium is an essential element of the diet and is a cofactor for many enzymes. In this study, the channel kinase TRPM7 is shown to be essential for magnesium homeostasis, and heterozygous mice lacking the kinase domain show a defect in absorption of magnesium from the diet.
- Published
- 2010
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48. Alpha-kinases: a new class of protein kinases with a novel catalytic domain
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Karen S. Pavur, Maxim V. Dorovkov, and Alexey G. Ryazanov
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Expressed Sequence Tags ,Sequence Homology, Amino Acid ,Agricultural and Biological Sciences(all) ,Biochemistry, Genetics and Molecular Biology(all) ,Kinase ,Molecular Sequence Data ,Alpha (ethology) ,Computational biology ,Biology ,General Biochemistry, Genetics and Molecular Biology ,Domain (software engineering) ,Catalytic Domain ,Animals ,Humans ,Amino Acid Sequence ,Phosphorylation ,General Agricultural and Biological Sciences ,Protein Kinases - Published
- 1999
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49. The alpha-kinases TRPM6 and TRPM7, but not eEF-2 kinase, phosphorylate the assembly domain of myosin IIA, IIB and IIC
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Frank N. van Leeuwen, Edwin Lasonder, Alexey G. Ryazanov, Maxim V. Dorovkov, Kristopher Clark, Carl G. Figdor, and Jeroen Middelbeek
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Elongation Factor 2 Kinase ,Myosin light-chain kinase ,Age-related aspects of cancer [ONCOL 2] ,TRPM6 ,Molecular Sequence Data ,Biophysics ,TRPM7 ,TRPM Cation Channels ,macromolecular substances ,Biology ,Protein Serine-Threonine Kinases ,Biochemistry ,Cell Line ,Metabolism, transport and motion [NCMLS 2] ,Protein structure ,Structural Biology ,Immune Regulation [NCMLS 2] ,Translational research [ONCOL 3] ,Myosin ,Genetics ,Humans ,Amino Acid Sequence ,Phosphorylation ,Molecular Biology ,Peptide sequence ,Myosin II ,Myosin Type II ,Protein-Serine-Threonine Kinases ,Nonmuscle Myosin Type IIB ,Myosin Heavy Chains ,Kinase ,Nonmuscle Myosin Type IIA ,Wild type ,Immunotherapy, gene therapy and transplantation [UMCN 1.4] ,Cell Biology ,Protein Structure, Tertiary ,Mitochondrial medicine [IGMD 8] ,Cellular energy metabolism [UMCN 5.3] ,α-Kinase ,Immunity, infection and tissue repair [NCMLS 1] - Abstract
TRPM6 and TRPM7 encode channel-kinases. While these channels share electrophysiological properties and cellular functions, TRPM6 and TRPM7 are non-redundant genes raising the possibility that the kinases have distinct substrates. Here, we demonstrate that TRPM6 and TRPM7 phosphorylate the assembly domain of myosin IIA, IIB and IIC on identical residues. Whereas phosphorylation of myosin IIA is restricted to the coiled-coil domain, TRPM6 and TRPM7 also phosphorylate the non-helical tails of myosin IIB and IIC. TRPM7 does not phosphorylate eukaryotic elongation factor-2 (eEF-2) and myosin II is a poor substrate for eEF-2 kinase. In conclusion, TRPM6 and TRPM7 share exogenous substrates among themselves but not with functionally distant α-kinases.Structured summaryMINT-6700314:GNA1 (uniprotkb:Q96EK6) and GNA1 (uniprotkb:Q96EK6) bind (MI:0407) by X-ray crystallography (MI:0114)
- Published
- 2008
50. TRPM7 regulates myosin IIA filament stability and protein localization by heavy chain phosphorylation
- Author
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Nick A. Morrice, Frank N. van Leeuwen, Edwin Lasonder, Jeroen Middelbeek, Anne R. Bresnick, Alexey G. Ryazanov, Natalya G. Dulyaninova, Kristopher Clark, and Carl G. Figdor
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Myosin light-chain kinase ,Age-related aspects of cancer [ONCOL 2] ,Molecular Sequence Data ,TRPM Cation Channels ,macromolecular substances ,Biology ,Article ,Cell Line ,Myosin head ,Metabolism, transport and motion [NCMLS 2] ,Mice ,Phosphoserine ,Structural Biology ,Immune Regulation [NCMLS 2] ,Translational research [ONCOL 3] ,Myosin ,Chlorocebus aethiops ,Animals ,Humans ,Amino Acid Sequence ,Phosphorylation ,Cytoskeleton ,Molecular Biology ,Actin ,Conserved Sequence ,Myosin Heavy Chains ,Nonmuscle Myosin Type IIA ,Immunotherapy, gene therapy and transplantation [UMCN 1.4] ,Subcellular localization ,Protein subcellular localization prediction ,Cell biology ,Kinetics ,Mitochondrial medicine [IGMD 8] ,Phosphothreonine ,Biochemistry ,Mutation ,MYH7 ,Cellular energy metabolism [UMCN 5.3] ,Sequence Alignment ,Immunity, infection and tissue repair [NCMLS 1] - Abstract
Contains fulltext : 70900.pdf (Publisher’s version ) (Closed access) Deregulation of myosin II-based contractility contributes to the pathogenesis of human diseases, such as cancer, which underscores the necessity for tight spatial and temporal control of myosin II activity. Recently, we demonstrated that activation of the mammalian alpha-kinase TRPM7 inhibits myosin II-based contractility in a Ca(2+)- and kinase-dependent manner. However, the molecular mechanism is poorly defined. Here, we demonstrate that TRPM7 phosphorylates the COOH-termini of both mouse and human myosin IIA heavy chains--the COOH-terminus being a region that is critical for filament stability. Phosphorylated residues were mapped to Thr1800, Ser1803 and Ser1808. Mutation of these residues to alanine and that to aspartic acid lead to an increase and a decrease, respectively, in myosin IIA incorporation into the actomyosin cytoskeleton and accordingly affect subcellular localization. In conclusion, our data demonstrate that TRPM7 regulates myosin IIA filament stability and localization by phosphorylating a short stretch of amino acids within the alpha-helical tail of the myosin IIA heavy chain.
- Published
- 2007
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