1. Discovery of a new bacterium, Microbacterium betulae sp. nov., in birch wood associated with hypersensitivity pneumonitis in woodworkers.
- Author
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Paściak M, Pawlik KJ, Martynowski D, Łaczmański Ł, Ciekot J, Szponar B, Wójcik-Fatla A, Mackiewicz B, Farian E, Cholewa G, Cholewa A, and Dutkiewicz J
- Subjects
- Genome, Bacterial genetics, Nucleic Acid Hybridization, Bacterial Typing Techniques, Sequence Analysis, DNA, Wood microbiology, Betula microbiology, RNA, Ribosomal, 16S genetics, Phylogeny, DNA, Bacterial genetics, Fatty Acids analysis, Fatty Acids chemistry, Alveolitis, Extrinsic Allergic microbiology, Microbacterium genetics, Microbacterium classification, Microbacterium isolation & purification
- Abstract
A Gram-positive, aerobic, rod-shaped mesophilic bacterium was isolated from birch wood, referred to as the AB strain. Allergological tests suggest that this strain may cause allergic alveolitis in sawmill workers. Employing a polyphasic taxonomic approach, the AB strain's 16S rRNA gene sequence showed high similarity to Microbacterium barkeri and M. oryzae, with 97.25% and 96.91%, respectively, a finding supported by rpoB and gyrB sequence analysis. Further genome sequence comparison with the closely related M. barkeri type strain indicated a digital DNA-DNA hybridization value of 25.5% and an average nucleotide identity of 82.52%. The AB strain's cell wall peptidoglycan contains ornithine, and its polar lipids comprise diphosphatidylglycerol, phosphatidylglycerol, and unidentified glycolipids. Its major fatty acids include anteiso C15:0, anteiso C17:0, and iso C16:0, while MK-10 is its predominant respiratory quinone. Comprehensive analysis through 16S rRNA, whole-genome sequencing, phenotyping, chemotaxonomy, and MALDI-TOF MS profiling indicates that the AB strain represents a new species within the Microbacterium genus. It has been proposed to name this species Microbacterium betulae sp. nov., with AB
T (PCM 3040T = CEST 30706T ) designated as the type strain., (© 2024 The Author(s). Environmental Microbiology Reports published by John Wiley & Sons Ltd.)- Published
- 2024
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