188 results on '"Andrew C. Fowler"'
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2. The Morphology of the Martian Ice Caps: A Mathematical Model of Ice-Dust Kinetics.
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R. J. Zammett and Andrew C. Fowler
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- 2010
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3. The Formation of River Channels.
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Andrew C. Fowler, Natalia Kopteva, and Charles Oakley
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- 2007
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4. Oscillations in a Maturation Model of Blood Cell Production.
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Ivana Drobnjak, Andrew C. Fowler, and Michael C. Mackey
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- 2006
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5. Intermittency in the Transition to Turbulence.
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Andrew C. Fowler and Peter D. Howell
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- 2003
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6. Relaxation Oscillations in a Class of Delay Differential Equations.
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Andrew C. Fowler and Michael C. Mackey
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- 2002
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7. A general theory of glacier surges
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Andrew C. Fowler, Douglas I. Benn, Ian Hewitt, Heidi Sevestre, REBUS, NERC, University of St Andrews. Bell-Edwards Geographic Data Institute, and University of St Andrews. School of Geography & Sustainable Development
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geography ,geography.geographical_feature_category ,enthalpy balance theory ,business.industry ,Ice stream ,Flow (psychology) ,Enthalpy ,G Geography (General) ,Glacier ,Atmospheric sciences ,3rd-NDAS ,Dynamics ,G1 ,SDG 13 - Climate Action ,Precipitation ,Surge ,BDC ,business ,Meltwater ,R2C ,Geology ,Thermal energy ,glacier surge ,Earth-Surface Processes - Abstract
Acknowledgements. Funding for DIB was provided by NE/R018243/1 REBUS (Resolving Enthalpy Budget to Understand Surging). We present the first general theory of glacier surging that includes both temperate and polythermal glacier surges, based on coupled mass and enthalpy budgets. Enthalpy (in the form of thermal energy and water) is gained at the glacier bed from geothermal heating plus frictional heating (expenditure of potential energy) as a consequence of ice flow. Enthalpy losses occur by conduction and loss of meltwater from the system. Because enthalpy directly impacts flow speeds, mass and enthalpy budgets must simultaneously balance if a glacier is to maintain a steady flow. If not, glaciers undergo out-of-phase mass and enthalpy cycles, manifest as quiescent and surge phases. We illustrate the theory using a lumped element model, which parameterizes key thermodynamic and hydrological processes, including surface-to-bed drainage and distributed and channelized drainage systems. Model output exhibits many of the observed characteristics of polythermal and temperate glacier surges, including the association of surging behaviour with particular combinations of climate (precipitation, temperature), geometry (length, slope) and bed properties (hydraulic conductivity). Enthalpy balance theory explains a broad spectrum of observed surging behaviour in a single framework, and offers an answer to the wider question of why the majority of glaciers do not surge. Publisher PDF
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- 2019
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8. Fast and Slow Compaction in Sedimentary Basins.
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Andrew C. Fowler and Xin-She Yang 0001
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- 1998
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9. A Generalized Secondary Frost Heave Model.
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Andrew C. Fowler and William B. Krantz
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- 1994
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10. Sliding, Drainage and Subglacial Geomorphology
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Andrew C. Fowler and Felix Ng
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geography ,geography.geographical_feature_category ,Landform ,Sediment ,Basal sliding ,Glacier ,Glacial period ,Ice sheet ,Drainage ,Left behind ,Geomorphology ,Geology - Abstract
Complex processes occur at the base of glaciers and ice sheets that influence their flow and hydrological behaviour and determine the landforms left behind by glaciation. This chapter considers mathematical models of basal sliding, subglacial water drainage and till deformation, and introduces various subglacial landforms due to the interaction of ice, water and sediment. The treatment extends to models of large-scale phenomena including glacier outburst floods and glacier surges.
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- 2020
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11. The influence of pre-treatment on biomat development in soil treatment units
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Celia Somlai, Andrew C. Fowler, Jan Knappe, and Laurence Gill
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Hydrology ,Water flow ,0207 environmental engineering ,02 engineering and technology ,Wastewater ,010501 environmental sciences ,15. Life on land ,Waste Disposal, Fluid ,01 natural sciences ,6. Clean water ,Water Purification ,Soil ,Hydraulic conductivity ,Soil water ,Environmental Chemistry ,Environmental science ,Soil horizon ,020701 environmental engineering ,Ireland ,Subsoil ,Effluent ,Water content ,Groundwater ,0105 earth and related environmental sciences ,Water Science and Technology - Abstract
Soil treatment units (STUs) receiving effluent from on-site wastewater treatment systems (OWTSs) rely on the gradual development of a microbial biomat/biozone at the infiltrative surface for optimal effluent distribution and pollutant attenuation. Here, we present the first direct measurement of gradual biomat development in the field in STU trenches receiving either primary (PE) or secondary treated effluent (SE) under identical environmental, hydrological and subsoil conditions. Two domestic OWTSs were constructed in Ireland and monitored over a period of >2 years using an automated, three-dimensional network of buried soil water content sensors tracking water flow and retention within the soil underneath the infiltrative surface. While trenches receiving PE expressed signs of biomat formation along the entire length of STU trenches, biomats in trenches receiving SE were significantly muted and did not extend further than 10 m from the inlet at the end of the study. The presence of a mature biomat helped to retain soil moisture above background levels and made the system more resilient towards drought events and desiccation stress but led, in one case, to effluent ponding within the trenches. A growth-limited non-linear model fit revealed that biomats in SE trenches are expected to remain considerably shorter and will not spread along the entire trench design length, even after 10 years of operation, which is contrary to prevalent design assumptions. Muted biomat growth, on the contrary, might lead to localized hydraulic and pollutant overloading and has been shown previously to negatively affect the ability to attenuate pollutants effectively within the soil profile before the effluent reaches the groundwater.
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- 2020
12. Phase Transition in the Boltzmann–Vlasov Equation
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Andrew C. Fowler and SFI
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Physics ,Phase transition ,Scale (ratio) ,Vlasov equation ,Statistical and Nonlinear Physics ,State (functional analysis) ,Stability theory ,01 natural sciences ,Boltzmann equation ,Article ,010305 fluids & plasmas ,Term (time) ,symbols.namesake ,stabiity theory ,phase transition ,0103 physical sciences ,Boltzmann constant ,symbols ,010306 general physics ,Mathematical Physics ,Mathematical physics - Abstract
In this paper we revisit the problem of explaining phase transition by a study of a form of the Boltzmann equation, where inter-molecular attraction is included by means of a Vlasov term in the evolution equation for the one particle distribution function. We are able to show that for typical gas densities, a uniform state is unstable if the inter-molecular attraction is large enough. Our analysis relies strongly on the assumption, essential to the derivation of the Boltzmann equation, that \documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$$\nu \ll 1,$$\end{document}ν≪1, where \documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$$\nu =d/l$$\end{document}ν=d/l is the ratio of the molecular diameter to the mean inter-particle distance; in this case, for fluctuations on the scale of the molecular spacing, the collision term is small, and an explicit approximate solution is possible. We give reasons why we think the resulting approximation is valid, and in conclusion offer some possibilities for extension of the results to finite amplitude.
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- 2019
13. Atto-Foxes and Other Minutiae
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Andrew C. Fowler
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Frogspawn ,Rabies ,General Mathematics ,Immunology ,Population ,Population Dynamics ,Foxes ,Special Issue: Celebrating J. D. Murray ,Type (model theory) ,Boom-and-bust ,General Biochemistry, Genetics and Molecular Biology ,Econometrics ,Animals ,education ,Atto-foxes ,General Environmental Science ,Mathematics ,Simple (philosophy) ,Pharmacology ,Minutiae ,education.field_of_study ,Extinction ,Continuous modelling ,General Neuroscience ,Small number ,Stochastic logistic model ,Mathematical Concepts ,Atto ,Computational Theory and Mathematics ,General Agricultural and Biological Sciences - Abstract
This paper addresses the problem of extinction in continuous models of population dynamics associated with small numbers of individuals. We begin with an extended discussion of extinction in the particular case of a stochastic logistic model, and how it relates to the corresponding continuous model. Two examples of ‘small number dynamics’ are then considered. The first is what Mollison calls the ‘atto-fox’ problem (in a model of fox rabies), referring to the problematic theoretical occurrence of a predicted rabid fox density of $$10^{-18}$$ 10 - 18 (atto-) per square kilometre. The second is how the production of large numbers of eggs by an individual can reliably lead to the eventual survival of a handful of adults, as it would seem that extinction then becomes a likely possibility. We describe the occurrence of the atto-fox problem in other contexts, such as the microbial ‘yocto-cell’ problem, and we suggest that the modelling resolution is to allow for the existence of a reservoir for the extinctively challenged individuals. This is functionally similar to the concept of a ‘refuge’ in predator–prey systems and represents a state for the individuals in which they are immune from destruction. For what I call the ‘frogspawn’ problem, where only a few individuals survive to adulthood from a large number of eggs, we provide a simple explanation based on a Holling type 3 response and elaborate it by means of a suitable nonlinear age-structured model.
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- 2020
14. Counter-current convection in a volcanic conduit
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Andrew C. Fowler and Marguerite Robinson
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Convection ,010504 meteorology & atmospheric sciences ,Prandtl number ,Grashof number ,Magma chamber ,Mechanics ,010502 geochemistry & geophysics ,01 natural sciences ,Physics::Geophysics ,Physics::Fluid Dynamics ,symbols.namesake ,Geophysics ,Electrical conduit ,Flow (mathematics) ,Geochemistry and Petrology ,Magma ,symbols ,Two-phase flow ,Geology ,0105 earth and related environmental sciences - Abstract
Volcanoes of Strombolian type are able to maintain their semi-permanent eruptive states through the constant convective recycling of magma within the conduit leading from the magma chamber. In this paper we study the form of this convection using an analytic model of degassing two-phase flow in a vertical channel. We provide solutions for the flow at small Grashof and large Prandtl numbers, and we suggest that permanent steady-state counter-current convection is only possible if an initial bubbly counter-current flow undergoes a regime transition to a churn-turbulent flow. We also suggest that the magma in the chamber must be under-pressured in order for the flow to be maintained, and that this compromises the assumed form of the flow.
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- 2018
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15. Microbial dormancy and boom-and-bust population dynamics under starvation stress
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H.F. Winstanley and Andrew C. Fowler
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Population Density ,0301 basic medicine ,education.field_of_study ,Ecology ,Population Dynamics ,fungi ,030106 microbiology ,Population ,Starvation (glaciology) ,Plankton ,Biology ,Models, Biological ,03 medical and health sciences ,030104 developmental biology ,Nutrient ,Starvation ,Stress, Physiological ,Bust ,Dormancy ,Extreme environment ,Bloom ,education ,Ecology, Evolution, Behavior and Systematics - Abstract
We propose a model for the growth of microbial populations in the presence of a rate-limiting nutrient which accounts for the switching of cells to a dormant phase at low densities in response to decreasing concentration of a putative biochemical signal. We then show that in conditions of nutrient starvation, self-sustained oscillations can occur, thus providing a natural explanation for such phenomena as plankton blooms. However, unlike results of previous studies, the microbial population minima do not become unrealistically small, being buffered during minima by an increased dormant phase population. We also show that this allows microbes to survive in extreme environments for very long periods, consistent with observation. The mechanism provides a natural vehicle for other such sporadic outbreaks, such as viral epidemics.
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- 2018
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16. Production of nitrate spikes in a model of ammonium biodegradation
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Andrew C. Fowler, Iain R. Moyles, and SFI
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ammonium plume ,0301 basic medicine ,Ecology ,biology ,Chemistry ,Ecological Modeling ,030106 microbiology ,food and beverages ,Nitrobacter ,Biodegradation ,biology.organism_classification ,nitrification ,Plume ,03 medical and health sciences ,chemistry.chemical_compound ,030104 developmental biology ,Brocadia anammoxidans ,Nitrate ,Environmental chemistry ,Nitrification ,Ammonium ,spatial oscillations ,bacterial competition ,Nitrosomonas - Abstract
peer-reviewed Nitrification at the site of a contaminant ammonium plume from a former coal carbonisation plant can be modelled with three competing bacterial populations of Nitrosomonas, Nitrobacter, and Brocadia anammoxidans. Oscillations of chemical species at the site can be explained by a reduced model of ammonium competition between Nitrosomonas and B. anammoxidans which effectively acts as an activator-inhibitor system. Stable oscillations occur in conditions of low nutrient (ammonium) supply and this causes a spatial travelling wave in a borehole profile when diffusion is introduced.
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- 2018
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17. Identification, characterization and immunogenicity of an O-antigen capsular polysaccharide of Francisella tularensis.
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Michael A Apicella, Deborah M B Post, Andrew C Fowler, Bradley D Jones, Jed A Rasmussen, Jason R Hunt, Sayaka Imagawa, Biswa Choudhury, Thomas J Inzana, Tamara M Maier, Dara W Frank, Thomas C Zahrt, Kathryn Chaloner, Michael P Jennings, Molly K McLendon, and Bradford W Gibson
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Medicine ,Science - Abstract
Capsular polysaccharides are important factors in bacterial pathogenesis and have been the target of a number of successful vaccines. Francisella tularensis has been considered to express a capsular antigen but none has been isolated or characterized. We have developed a monoclonal antibody, 11B7, which recognizes the capsular polysaccharide of F. tularensis migrating on Western blot as a diffuse band between 100 kDa and 250 kDa. The capsule stains poorly on SDS-PAGE with silver stain but can be visualized using ProQ Emerald glycoprotein stain. The capsule appears to be highly conserved among strains of F. tularensis as antibody 11B7 bound to the capsule of 14 of 14 F. tularensis type A and B strains on Western blot. The capsular material can be isolated essentially free of LPS, is phenol and proteinase K resistant, ethanol precipitable and does not dissociate in sodium dodecyl sulfate. Immunoelectron microscopy with colloidal gold demonstrates 11B7 circumferentially staining the surface of F. tularensis which is typical of a polysaccharide capsule. Mass spectrometry, compositional analysis and NMR indicate that the capsule is composed of a polymer of the tetrasaccharide repeat, 4)-alpha-D-GalNAcAN-(1->4)-alpha-D-GalNAcAN-(1->3)-beta-D-QuiNAc-(1->2)-beta-D-Qui4NFm-(1-, which is identical to the previously described F. tularensis O-antigen subunit. This indicates that the F. tularensis capsule can be classified as an O-antigen capsular polysaccharide. Our studies indicate that F. tularensis O-antigen glycosyltransferase mutants do not make a capsule. An F. tularensis acyltransferase and an O-antigen polymerase mutant had no evidence of an O-antigen but expressed a capsular antigen. Passive immunization of BALB/c mice with 75 microg of 11B7 protected against a 150 fold lethal challenge of F. tularensis LVS. Active immunization of BALB/c mice with 10 microg of capsule showed a similar level of protection. These studies demonstrate that F. tularensis produces an O-antigen capsule that may be the basis of a future vaccine.
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- 2010
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18. Review of Principles of Glacier Mechanics Roger LeB. Hooke. Cambridge University Press. 3rd edition. 2020. 513+xii pp. ISBN: 978‐1‐108‐42734‐0 (hardback), 978‐1‐108‐ 44607‐5 (paperback)
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Andrew C. Fowler
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Environmental sciences ,geography ,QE1-996.5 ,geography.geographical_feature_category ,Philosophy ,Soil Science ,Glacier ,GE1-350 ,Geology ,Humanities - Published
- 2020
19. The Scientific Legacy of George Gabriel Stokes
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Andrew C. Fowler
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Physics::Fluid Dynamics ,GEORGE (programming language) ,media_common.quotation_subject ,Mathematics::Analysis of PDEs ,Art history ,Art ,Nonlinear Sciences::Pattern Formation and Solitons ,media_common - Abstract
The scientific legacy of George Gabriel Stokes is considered. Certain aspects of Stokes’s research work are reviewed and related to more recent fields of research. These include the Navier–Stokes equations and other approaches to rational continuum mechanics, the issue of existence of solutions, the boundary no-slip condition; Stokes flow and the issue of pendulum drag; the Hele-Shaw cell, viscous fingering, wavelength selection in pattern formation; moving contact lines; the highest water wave, rogue waves, the NLS equation; Stokes lines, exponential asymptotics, dendrite growth, slow manifods, and diffraction.
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- 2019
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20. Regularization of the Ostwald supersaturation model for Liesegang bands
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Stephen O'Brien, Iain R. Moyles, Andrew C. Fowler, and J. M. Duley
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Liesegang rings ,Supersaturation ,Materials science ,Condensed matter physics ,General Mathematics ,Numerical analysis ,General Engineering ,Nucleation ,General Physics and Astronomy ,Crystal growth rate ,02 engineering and technology ,021001 nanoscience & nanotechnology ,01 natural sciences ,010101 applied mathematics ,Impurity ,Regularization (physics) ,0101 mathematics ,0210 nano-technology ,Research Article - Abstract
In a previous paper, we analysed the Keller–Rubinow formulation of Ostwald's supersaturation theory for the formation of Liesegang rings or Liesegang bands, and found that the model is ill-posed, in the sense that after the termination of the first crystal front growth, secondary bands form, as in the experiment, but these are numerically found to be a single grid space wide, and thus an artefact of the numerical method. This ill-posedness is due to the discontinuity in the crystal growth rate, which itself reflects the supersaturation threshold inherent in the theory. Here we show that the ill-posedness can be resolved by the inclusion of a relaxation mechanism describing an impurity coverage fraction, which physically enables the transition in heterogeneous nucleation from precipitate-free impurity to precipitate-covered impurity.
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- 2019
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21. Application of the compressible -dependent rheology to chute and shear flow instabilities
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James S. Fannon, Iain R. Moyles, Andrew C. Fowler, and SFI
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Physics ,business.product_category ,Mechanical Engineering ,Mechanics ,Condensed Matter Physics ,01 natural sciences ,Instability ,010305 fluids & plasmas ,Physics::Fluid Dynamics ,Condensed Matter::Soft Condensed Matter ,Shear (geology) ,Rheology ,Mechanics of Materials ,0103 physical sciences ,Volume fraction ,Compressibility ,rheology ,Inclined plane ,010306 general physics ,business ,Shear flow ,linear stability ,Linear stability - Abstract
We consider the instability properties of dense granular flow in inclined plane and plane shear geometries as tests for the compressible inertial-dependent rheology. The model, which is a recent generalisation of the incompressible $\unicode[STIX]{x1D707}(I)$ rheology, constitutes a hydrodynamical description of dense granular flow which allows for variability in the solids volume fraction. We perform a full linear stability analysis of the model and compare its predictions to existing experimental data for glass beads on an inclined plane and discrete element simulations of plane shear in the absence of gravity. In the case of the former, we demonstrate that the compressible model can quantitatively predict the instability properties observed experimentally, and, in particular, we find that it performs better than its incompressible counterpart. For the latter, the qualitative behaviour of the plane shear instability is also well captured by the compressible model.
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- 2019
22. The Dynamics of Ascaris lumbricoides Infections
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Andrew C. Fowler and T. Déirdre Hollingsworth
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Life Sciences & Biomedicine - Other Topics ,0301 basic medicine ,Stochastic modelling ,Negative binomial distribution ,DISEASE ,FAMILIES ,Mathematical model ,0302 clinical medicine ,Joint probability distribution ,Ascariasis ,General Environmental Science ,NUMBERS ,biology ,Ecology ,General Neuroscience ,CHEMOTHERAPY ,Binomial Distribution ,Computational Theory and Mathematics ,STOCHASTIC TRANSMISSION ,Human parasite ,Infectious diseases ,Ascaris lumbricoides ,General Agricultural and Biological Sciences ,Life Sciences & Biomedicine ,PARASITE POPULATION INTERACTIONS ,Bioinformatics ,General Mathematics ,MODELS ,030231 tropical medicine ,Immunology ,Zoology ,Models, Biological ,Stability (probability) ,General Biochemistry, Genetics and Molecular Biology ,03 medical and health sciences ,HOOKWORM ,TRANSMITTED HELMINTH INFECTIONS ,medicine ,Animals ,Humans ,Helminths ,Parasite Egg Count ,Biology ,01 Mathematical Sciences ,Pharmacology ,Stochastic Processes ,Science & Technology ,STABILITY ,fungi ,Mathematical Concepts ,06 Biological Sciences ,medicine.disease ,biology.organism_classification ,030104 developmental biology ,Nonlinear Dynamics ,Mathematical & Computational Biology ,Digestive System - Abstract
The Anderson–May model of human parasite infections and specifically that for the intestinal worm Ascaris lumbricoides is reconsidered, with a view to deriving the observed characteristic negative binomial distribution which is frequently found in human communities. The means to obtaining this result lies in reformulating the continuous Anderson–May model as a stochastic process involving two essential populations, the density of mature worms in the gut, and the density of mature eggs in the environment. The resulting partial differential equation for the generating function of the joint probability distribution of eggs and worms can be partially solved in the appropriate limit where the worm lifetime is much greater than that of the mature eggs in the environment. Allowing for a mean field nonlinearity, and for egg immigration from neighbouring communities, a negative binomial worm distribution can be predicted, whose parameters are determined by those in the continuous Anderson–May model; this result assumes no variability in predisposition to the infection.\ud
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- 2016
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23. Quasi-steady uptake and bacterial community assembly in a mathematical model of soil-phosphorus mobility
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Iain R. Moyles, John G. Donohue, and Andrew C. Fowler
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0301 basic medicine ,Statistics and Probability ,Nutrient cycle ,Nitrogen ,chemistry.chemical_element ,Dynamical Systems (math.DS) ,General Biochemistry, Genetics and Molecular Biology ,Soil ,03 medical and health sciences ,0302 clinical medicine ,Nutrient ,Human fertilization ,FOS: Mathematics ,Mathematics - Dynamical Systems ,Quantitative Biology - Populations and Evolution ,Soil Microbiology ,Bacteria ,General Immunology and Microbiology ,Chemistry ,Applied Mathematics ,Phosphorus ,Populations and Evolution (q-bio.PE) ,General Medicine ,Models, Theoretical ,Nutrient content ,030104 developmental biology ,FOS: Biological sciences ,Modeling and Simulation ,Environmental chemistry ,Quasi steady ,Soil phosphorus ,Steady state (chemistry) ,General Agricultural and Biological Sciences ,030217 neurology & neurosurgery - Abstract
We mathematically model the uptake of phosphorus by a soil community consisting of a plant and two bacterial groups: copiotrophs and oligotrophs. Four equilibrium states emerge, one for each of the species monopolising the resource and dominating the community and one with coexistence of all species. We show that the dynamics are controlled by the ratio of chemical adsorption to bacterial death permitting either oscillatory states or quasi-steady uptake. We show how a steady state can emerge which has soil and plant nutrient content unresponsive to increased fertilization. However, the additional fertilization supports the copiotrophs leading to community reassembly. Our results demonstrate the importance of time-series measurements in nutrient uptake experiments.
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- 2021
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24. One-Dimensional Maps
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Andrew C. Fowler and Mark McGuinness
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Nonlinear Sciences::Chaotic Dynamics ,CHAOS (operating system) ,Statement (computer science) ,Pure mathematics ,Mathematics::Dynamical Systems ,Periodic orbits ,Mathematics - Abstract
The theory of chaos in one-dimensional maps is described. We start with the basic bifurcations, following which there is an extended discussion of period-doubling sequences and the Feigenbaum conjectures. There follows an extended discussion of kneading theory, culminating with a statement of Sarkovskii’s ordering of the periodic orbits of unimodal maps.
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- 2019
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25. The size of mandelbrot bulbs
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Andrew C. Fowler and Mark McGuinness
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Physics ,Quantitative Biology::Neurons and Cognition ,General Mathematics ,lcsh:Mathematics ,010102 general mathematics ,Winding number ,Geometry ,Radius ,Mandelbrot set ,lcsh:QA1-939 ,01 natural sciences ,Stability (probability) ,lcsh:QC1-999 ,Mandelbrot bulbs ,Cardioid ,0103 physical sciences ,0101 mathematics ,Orbit (control theory) ,010301 acoustics ,lcsh:Physics ,Uncategorized - Abstract
We provide an analytic estimate for the size of the bulbs adjoining the main cardioid of the Mandelbrot set. The bulbs are approximate circles, and are associated with the stability regions in the complex parameter μ-space of period-q orbits of the underlying map z → z 2 − μ . For the (p, q) orbit with winding number p/q, the associated stability bulb is an approximate circle with radius 1 q 2 sin π p q .
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- 2019
26. Sulfate fertilization supports growth of ryegrass in soil columns but changes microbial community structures and reduces abundances of nematodes and arbuscular mycorrhiza
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Andrew C. Fowler, Achim Schmalenberger, Sean Storey, Israel Ikoyi, and Evelyn Doyle
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Environmental Engineering ,Nematoda ,010504 meteorology & atmospheric sciences ,Soil biology ,010501 environmental sciences ,01 natural sciences ,Lolium perenne ,Soil ,chemistry.chemical_compound ,Nutrient ,Mycorrhizae ,Animals ,Environmental Chemistry ,Sulfate ,Mycorrhiza ,Fertilizers ,Waste Management and Disposal ,Soil Microbiology ,0105 earth and related environmental sciences ,biology ,Sulfates ,Microbiota ,biology.organism_classification ,Pollution ,Arbuscular mycorrhiza ,Agronomy ,chemistry ,Microbial population biology ,Soil water - Abstract
The increased use of sulfate fertilizers to compensate for soil sulphur (S) limitation in agricultural soils may affect soil microbes and micro-fauna involved in S mobilization. Here, columns with podzolic soil material and ryegrass (Lolium perenne) were fertilized with 0, 5, 10 and 20 kg ha−1 (S0/S5/S10/S20) inorganic sulfate-S alongside a full complement of other nutrients. In the S10 and S20 columns, significantly higher amounts of sulfate were present in soil solution. After two grass cuts (14 weeks in total), there was a significant decrease in arylsulfatase activity, bacterial-feeding nematode abundances and mycorrhizal colonization in the S10 and S20 columns compared to the S0. Bacterial, fungal and AM community structures shifted significantly across the treatments. After final harvest, the S10 and S20 columns had significantly higher grass dry matter yield and uptake of S, N, K, Ca and Mg compared to the S0. While the overall bacterial diversity was reduced in the S20 treatment, abundance (asfA) and diversity (ssuD and atsA) of bacterial genes involved in S cycling were not significantly affected by one-time sulfate fertilization. These results indicate that short-term sulfate fertilization benefits to plant growth outweighed the negative feedback from parts of the soil biota. To improve nutrient use efficiencies in a sustainable manner, future studies should consider alternative S fertilizers which may be beneficial to both, the soil biota and plants in the long-term.
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- 2020
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27. Correction to: The Dynamics of Ascaris lumbricoides Infections
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Andrew C. Fowler and T. Déirdre Hollingsworth
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Pharmacology ,History ,biology ,General Mathematics ,General Neuroscience ,Published Erratum ,Immunology ,MEDLINE ,biology.organism_classification ,Given name ,General Biochemistry, Genetics and Molecular Biology ,Genealogy ,Metadata ,Computational Theory and Mathematics ,Ascaris lumbricoides ,General Agricultural and Biological Sciences ,General Environmental Science - Abstract
In the original article, the second author's name was incorrect in the metadata. The given name is T. Deirdre, and the family name is Hollingsworth.
- Published
- 2018
28. One-time phosphate fertilizer application to grassland columns modifies the soil microbiota and limits its role in ecosystem services
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Andrew C. Fowler, Israel Ikoyi, and Achim Schmalenberger
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0301 basic medicine ,Conservation of Natural Resources ,Environmental Engineering ,Phosphatase ,Population ,chemistry.chemical_element ,Bradyrhizobium ,Lolium perenne ,Phosphates ,Soil ,03 medical and health sciences ,chemistry.chemical_compound ,Human fertilization ,Environmental Chemistry ,Mycorrhiza ,Fertilizers ,education ,Waste Management and Disposal ,Soil Microbiology ,education.field_of_study ,biology ,Phosphorus ,food and beverages ,04 agricultural and veterinary sciences ,Phosphate ,biology.organism_classification ,Grassland ,Pollution ,030104 developmental biology ,Agronomy ,chemistry ,040103 agronomy & agriculture ,0401 agriculture, forestry, and fisheries - Abstract
This study evaluated the effect of one-time phosphate fertilization on the soil microbiota, its cycling of phosphorus (P) and grass growth. Soil columns were established in a greenhouse using a P-limited Irish soil (index 1), planted with Lolium perenne and fertilized with 0 (control), 5 (quarter), 10 (half) and 20 (full) kg P ha−1 as inorganic phosphate. Only traces of phosphate in soil solution were detected over the 14 week experiment, even after phosphate fertilization. Grass dry matter yield between treatments was not significantly different. Full phosphate fertilization significantly reduced the arbuscular mycorrhization (AM) rate, bacterial- and fungal-feeding nematode population, bacterial phoD gene abundance, but increased alkaline and acid phosphatase activities at the time of harvest. Full and half P treatments significantly shifted the bacterial, fungal and AM community structures compared to the control. Furthermore, the control had a significantly higher relative abundance of bacterial genera including Bacillus, Bradyrhizobium, Paenibacillus, Nocardioides and Balneimonas, that have been associated with P mobilization in the past, when compared to the full phosphate treatment. These results suggest that a positive effect of a single phosphate application on plant growth in a soil can be cancelled out by its negative effect on the soil microbiota and their ecosystem services.
- Published
- 2018
29. Subglacial hydrology as a control on emergence,scale, and spacing of ice streams
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Andrew C. Fowler, T.M. Kyrke-Smith, and Richard F. Katz
- Subjects
Hydrology ,Length scale ,010504 meteorology & atmospheric sciences ,Scale (ratio) ,Ice stream ,Flow (psychology) ,STREAMS ,010502 geochemistry & geophysics ,01 natural sciences ,Physics::Geophysics ,Geophysics ,Fast ice ,13. Climate action ,Astrophysics::Earth and Planetary Astrophysics ,Meltwater ,Physics::Atmospheric and Oceanic Physics ,Geology ,Pressure gradient ,0105 earth and related environmental sciences ,Earth-Surface Processes - Abstract
Observations have long associated ice streams with the presence of meltwater at the bed. More recently, theoretical models have been able to reproduce ice-stream behaviour as a consequence of the coupled dynamics of ice and subglacial meltwater. In this paper we analyse the properties of ice streams that form in a coupled model of ice flow and subglacial hydrology. We see that there is a natural length scale defining ice stream separation and width. This arises as a result of the balance between effective pressure gradients driving meltwater away from ice streams and the enhanced water production in the streams due to the fast ice flow. We further discuss how the model interacts with topography and we show that small perturbations to a uniform bed have a strong effect on where ice streams emerge in the model. However, in many cases ice streams then evolve to be closer to the dimensions defined by the natural length scale of the unperturbed system. The non-dimensional parameter that defines this length scale is therefore of fundamental importance in the model.
- Published
- 2015
- Full Text
- View/download PDF
30. Glacial melt under a porous debris layer
- Author
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Christoph Mayer, Jonathan Kingslake, Matthias Heil, Sarah L. Mitchell, Andrew C. Fowler, Chris D. Clark, G. W. Evatt, and I. David Abrahams
- Subjects
geography ,geography.geographical_feature_category ,010504 meteorology & atmospheric sciences ,Airflow ,Evaporation ,Energy balance ,Mineralogy ,Glacier ,FOS: Earth and related environmental sciences ,010502 geochemistry & geophysics ,01 natural sciences ,Debris ,Geophysics ,Heat flux ,Energy transfer ,Glacial period ,Hydrology ,Porosity ,Moraines ,Glaciers ,Geomorphology ,Geology ,0105 earth and related environmental sciences ,Earth-Surface Processes - Abstract
In this paper we undertake a quantitative analysis of the dynamic process by which ice underneath a dry porous debris layer melts. We show that the incorporation of debris-layer airflow into a theoretical model of glacial melting can capture the empirically observed features of the so-called Østrem curve (a plot of the melt rate as a function of debris depth). Specifically, we show that the turning point in the Østrem curve can be caused by two distinct mechanisms: the increase in the proportion of ice that is debris-covered and/or a reduction in the evaporative heat flux as the debris layer thickens. This second effect causes an increased melt rate because the reduction in (latent) energy used for evaporation increases the amount of energy available for melting. Our model provides an explicit prediction for the melt rate and the temperature distribution within the debris layer, and provides insight into the relative importance of the two effects responsible for the maximum in the Østrem curve. We use the data of Nicholson and Benn (2006) to show that our model is consistent with existing empirical measurements.
- Published
- 2015
- Full Text
- View/download PDF
31. The formation of ice sails
- Author
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Christoph Mayer and Andrew C. Fowler
- Subjects
geography ,geography.geographical_feature_category ,010504 meteorology & atmospheric sciences ,Computational Mechanics ,Rock glacier ,Astronomy and Astrophysics ,Glacier ,010502 geochemistry & geophysics ,Glacier morphology ,01 natural sciences ,Debris ,Instability ,Geophysics ,Geochemistry and Petrology ,Mechanics of Materials ,Sea ice ,Geomorphology ,Geology ,0105 earth and related environmental sciences - Abstract
Debris-covered glaciers are prone to the formation of a number of supraglacial geomorphological features, and generally speaking, their upper surfaces are far from level surfaces. Some of these features are due to radiation screening or enhancing properties of the debris cover, but theoretical explanations of the consequent surface forms are in their infancy. In this paper we consider a theoretical model for the formation of ‘ice sails’, which are regularly spaced bare ice features which are found on debris-covered glaciers in the Karakoram.
- Published
- 2017
32. On the Keller-Rubinow model for Liesegang ring formation
- Author
-
J. M. Duley, Stephen O'Brien, Andrew C. Fowler, and Iain R. Moyles
- Subjects
Supersaturation ,Liesegang rings ,010304 chemical physics ,Basis (linear algebra) ,General Mathematics ,Computation ,General Engineering ,Nucleation ,General Physics and Astronomy ,01 natural sciences ,0103 physical sciences ,Calculus ,Statistical physics ,Limit (mathematics) ,010306 general physics ,Research Articles ,Mathematics ,Variable (mathematics) ,Parametric statistics - Abstract
We study the model of Keller & Rubinow (Keller & Rubinow 1981J. Chem. Phys74, 5000–5007. (doi:10.1063/1.441752)) describing the formation of Liesegang rings due to Ostwald's supersaturation mechanism. Keller and Rubinow provided an approximate solution both for the growth and equilibration of the first band, and also for the formation of secondary bands, based on a presumed asymptotic limit. However, they did not provide a parametric basis for the assumptions in their solution, nor did they provide any numerical corroboration, particularly of the secondary band formation. Here, we provide a different asymptotic solution, based on a specific parametric limit, and we show that the growth and subsequent cessation of the first band can be explained. We also show that the model is unable to explain the formation of finite width secondary bands, and we confirm this result by numerical computation. We conclude that the model is not fully posed, lacking a transition variable which can describe the hysteretic switch across the nucleation threshold.
- Published
- 2017
33. Reaction front formation in contaminant plumes
- Author
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Andrew C. Fowler, L.B. Cribbin, Sarah L. Mitchell, Graham C. Sander, and H.F. Winstanley
- Subjects
Chemistry ,Front (oceanography) ,Reaction front ,Mechanics ,Models, Theoretical ,Diffusion ,Propagation rate ,Environmental chemistry ,Water Movements ,Environmental Chemistry ,Diffusion (business) ,Groundwater ,Oxidation-Reduction ,Nonlinear Sciences::Pattern Formation and Solitons ,Contaminated groundwater ,Water Pollutants, Chemical ,Water Science and Technology - Abstract
The formation of successive fronts in contaminated groundwater plumes by subsoil bacterial action is a commonly accepted feature of their propagation, but it is not obviously clear from a mathematical standpoint quite how such fronts are formed or propagate. In this paper we show that these can be explained by combining classical reaction-diffusion theory involving just two reactants (oxidant and reductant), and a secondary reaction in which a reactant on one side of such a front is (re-)formed on the other side of the front via diffusion of its product across the front. We give approximate asymptotic solutions for the reactant profiles, and the propagation rate of the front.
- Published
- 2014
- Full Text
- View/download PDF
34. The formation of vesicular cylinders in pahoehoe lava flows
- Author
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Andrew C. Fowler, Michael Vynnycky, and Alison C Rust
- Subjects
Convection ,Basalt ,geography ,Buoyancy ,geography.geographical_feature_category ,Lava ,Computational Mechanics ,Astronomy and Astrophysics ,Rayleigh number ,engineering.material ,Silicate ,Volcanic rock ,chemistry.chemical_compound ,Geophysics ,chemistry ,Geochemistry and Petrology ,Mechanics of Materials ,engineering ,Petrology ,Porous medium ,Geology - Abstract
Vertical cylinders of bubble-enriched, chemically evolved volcanic rock are found in many inflated pahoehoe lava flows. We provide a putative theoretical explanation for their formation, based on a description of a crystallising three-phase (liquid, solid, gas) crystal pile in which the water-saturated silicate melt exsolves steam and becomes more silica-rich as it crystallises anhydrous minerals. These cylinders resemble pipes that form in solidifying binary alloys as a result of sufficiently vigorous porous medium convection within the mush. A convection model with the addition of gas bubbles that provide the buoyancy source indicates that the effective Rayleigh number is too low for convection to occur in the mush of a basalt lava flow. However, the formation of gas bubbles during crystallisation means that the base state includes fluid migration up through the crystal mush even without convection. Stability considerations suggest that it is plausible to form a positive feedback where increased local p...
- Published
- 2014
- Full Text
- View/download PDF
35. A Simple Thousand-Year Prognosis for Oceanic and Atmospheric Carbon Change
- Author
-
Andrew C. Fowler
- Subjects
Carbon dioxide in Earth's atmosphere ,Geophysics ,Geochemistry and Petrology ,Effects of global warming ,Climatology ,Effects of global warming on oceans ,Global warming ,Atmospheric carbon cycle ,Climate change ,Environmental science ,Ocean acidification ,Carbon cycle - Abstract
A simple carbon-cycle box model allows for very simple quantitative insight into the evolution of climate over the next millennium. While melting ice sheets, rising sea levels, and ocean acidification are well recognised, we show that a further consequence of the repartitioning of ocean carbon is a dramatic rise in atmospheric carbon dioxide on a millennial time scale.
- Published
- 2014
- Full Text
- View/download PDF
36. Oscillations in soil bacterial redox reactions
- Author
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H.F. Winstanley, Mark McGuinness, L.B. Cribbin, and Andrew C. Fowler
- Subjects
Statistics and Probability ,Time Factors ,media_common.quotation_subject ,Electrons ,Biology ,Models, Biological ,Redox ,General Biochemistry, Genetics and Molecular Biology ,Competition (biology) ,Traveling wave ,Noisy data ,Soil Microbiology ,media_common ,Bacteria ,General Immunology and Microbiology ,Ecology ,Applied Mathematics ,General Medicine ,Carbon ,Chemical physics ,Modeling and Simulation ,Soil column ,General Agricultural and Biological Sciences ,Porous medium ,Oxidation-Reduction ,Groundwater - Abstract
Spatial oscillations in soil contaminant concentration profiles are sometimes observed, but rarely commented on, or are attributed to noisy data. In this paper we consider a possible mechanism for the occurrence of oscillatory reactant profiles within contaminant plumes. The bioremediative reactions which occur are effected by bacteria, whose role is normally conceived of as being passive. Here we argue that competition, for example between heterotrophic and fermentative bacteria, can occur in the form of an activator–inhibitor system, thus promoting oscillations. We describe a simple model for the competition between two such microbial populations, and we show that in normal oligotrophic groundwater conditions, oscillatory behaviour is easily obtained. When such competition occurs in a dispersive porous medium, travelling waves can be generated, which provide a possible explanation for the observed soil column oscillations.
- Published
- 2014
- Full Text
- View/download PDF
37. Respiratory Control and the Onset of Periodic Breathing
- Author
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Andrew C. Fowler
- Subjects
Applied Mathematics ,Conceptual basis ,Instability ,Cheyne–Stokes respiration ,Physiological model ,Modeling and Simulation ,Bicarbonate buffering system ,Periodic breathing ,Breathing ,medicine ,Respiratory control ,Statistical physics ,medicine.symptom ,Mathematics - Abstract
We analyse a reduced version of the Grodins et al. control model [14] of respiration involving only CO2 , and show that it can be dramatically simplified by the use of judicious approximations. In particular, we show that the conceptual basis of the popular model of Mackey and Glass [20] is at odds with the important transport processes of the Grodins model. Despite this, a realistic approximation of the Grodins model yields a Mackey-Glass type model with almost the same criterion for the onset of Cheyne-Stokes breathing. While the reduced Grodins model does apparently provide a realistic mechanism for instability, consideration of the buffering effect of the blood-brain barrier appears to make it unlikely. We conclude that a realistic physiological model of Grodins type to explain Cheyne–Stokes breathing is not yet in place, and raise the question whether the bicarbonate buffering system has a role to play.
- Published
- 2014
- Full Text
- View/download PDF
38. On the size and shape of drumlins
- Author
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Andrew C. Fowler, Chris R. Stokes, Paul Dunlop, Matteo Spagnolo, Anna L.C. Hughes, and Chris D. Clark
- Subjects
geography ,geography.geographical_feature_category ,Instability theory ,Drumlin ,Geometry ,Size and shape ,Small amplitude ,Instability ,Drumlins ,Modeling and Simulation ,General Earth and Planetary Sciences ,Computational Science and Engineering ,Mathematics - Abstract
We provide a mechanistic explanation for observed metrics for drumlins, which represent their sizes and shapes. Our explanation is based on a concept of drumlin growth occurring through a process of instability, whereby small amplitude wave forms first grow as ice slides over a bed of deformable sediments, followed by a coarsening process, in which the wavelength as well as the relief of the drumlins continues to grow. The observations then provide inferences about the growth process itself.
- Published
- 2013
- Full Text
- View/download PDF
39. Note on a paper by Omta et al. on sawtooth oscillations
- Author
-
Andrew C. Fowler
- Subjects
Numerical Analysis ,Nonlinear oscillators ,Control and Optimization ,Chemistry ,Applied Mathematics ,Modeling and Simulation ,Climatology ,Sawtooth wave ,Statistical physics - Abstract
We discuss a recently proposed model for the sawtooth oscillations of atmospheric carbon observed in ice age cores. The model at its simplest arises from a single reaction involving just two species, oceanic biomass and nutrient, and bears similarity to models which have been proposed to explain oscillations in glycolysis. We show that the sawtooth behaviour, and associated spiking of one of the constituents, is associated with the existence of a conservative nonlinear oscillator with an asymmetric potential at high values of the energy, and we give asymptotic descriptions of the solutions. We extend the analysis to a more complicated model which includes competition between planktonic species.
- Published
- 2013
- Full Text
- View/download PDF
40. A mechanism for episodic subduction on Venus
- Author
-
Stephen O'Brien and Andrew C. Fowler
- Subjects
Atmospheric Science ,Ecology ,Subduction ,Paleontology ,Soil Science ,Forestry ,Rayleigh number ,Geophysics ,Aquatic Science ,Oceanography ,Mantle (geology) ,Thermal subsidence ,Tectonics ,Plate tectonics ,Mantle convection ,Space and Planetary Science ,Geochemistry and Petrology ,Lithosphere ,Earth and Planetary Sciences (miscellaneous) ,Geology ,Earth-Surface Processes ,Water Science and Technology - Abstract
We propose a mechanism previously developed as a hypothetical cause of the initiation of subduction in the Earth's mantle, to describe a situation where such subduction may occur transiently, at irregular intervals of time. It has been suggested that tectonics on Venus may be described by such a scenario. In our model, a subduction event is followed by resumption of high Rayleigh number mantle convection below a stagnant lithosphere which thickens due to conductive cooling. As it thickens, differential buoyancy causes large lithospheric stresses which eventually lead to (plastic) failure in the upper portions of the lithosphere. This plastic zone thickens faster than the lithosphere, so that at some critical time, it reaches the base of the lithosphere. At this point, the effective lithosphere viscosity decreases to that of the underlying mantle, and subduction can occur. We suggest that this is mechanistically consistent with the postulated Venusian tectonic style.
- Published
- 2016
41. Partial melting in an upwelling mantle column
- Author
-
Ian Hewitt and Andrew C. Fowler
- Subjects
geography ,geography.geographical_feature_category ,Thermodynamic equilibrium ,General Mathematics ,General Engineering ,Compaction ,Partial melting ,General Physics and Astronomy ,Thermodynamics ,Mid-ocean ridge ,Geophysics ,Mantle (geology) ,Lithosphere ,Boundary value problem ,Porosity ,Geology - Abstract
Decompression melting of hot upwelling rock in the mantle creates a region of partial melt comprising a porous solid matrix through which magma rises buoyantly. Magma transport and the compensating matrix deformation are commonly described by two-phase compaction models, but melt production is less often incorporated. Melting is driven by the necessity to maintain thermodynamic equilibrium between mineral grains in the partial melt; the position and amount of partial melting that occur are thus thermodynamically determined. We present a consistent model for the ascent of a one-dimensional column of rock and provide solutions that reveal where and how much partial melting occurs, the positions of the boundaries of the partial melt being determined by conserving energy across them. Thermodynamic equilibrium of the boundary between partial melt and the solid lithosphere requires a boundary condition on the effective pressure (solid pressure minus melt pressure), which suggests that large effective stresses, and hence fracture, are likely to occur near the base of the lithosphere. Matrix compaction, melt separation and temperature in the partially molten region are all dependent on the effective pressure, a fact that can lead to interesting oscillatory boundary-layer structures. © 2008 The Royal Society.
- Published
- 2016
42. Thermally controlled glacier surging
- Author
-
Andrew C. Fowler, Tavi Murray, and Felix Ng
- Subjects
Glacier ice accumulation ,010506 paleontology ,geography ,Glacier terminus ,geography.geographical_feature_category ,010504 meteorology & atmospheric sciences ,Ice stream ,Rock glacier ,Glacier ,Glacier morphology ,01 natural sciences ,Subglacial stream ,Surge ,Geomorphology ,Geology ,0105 earth and related environmental sciences ,Earth-Surface Processes - Abstract
Bakaninbreen in Svalbard and Trapridge Glacier in Yukon Territory, Canada, are two prominent examples of surging glaciers which are thought to be controlled by their thermal regime. Both glaciers have developed large bulges which have propagated forward as travelling wave fronts, and which are thought to divide relatively stagnant downstream cold-based ice from faster-moving warm-based upstream ice. Additionally, both glaciers are underlain by a wet, metres thick layer of deforming till. We develop a simple model for the cyclic surging behaviour of these glaciers, which interrelates the motion of the ice and till through a description of the subglacial hydrology. We find that oscillations (surges) can occur if the subglacial hydrological transmissivity is sufficiently low and the till layer is sufficiently thin, and we suggest that these oscillations are associated with the development and propagation of a travelling wave front down the glacier. We therefore interpret the travelling wave fronts on both Trapridge Glacier and Bakaninbreen as manifestations of surges. In addition, we find that the violence of the surge in the model is associated with the resistance to ice flow offered by undulations in the bed, and the efficiency with which occasional hydrological events can release water accumulated at the glacier sole.
- Published
- 2016
43. Stress balances of ice streams in a vertically integrated, higher-order formulation
- Author
-
Richard F. Katz, T.M. Kyrke-Smith, and Andrew C. Fowler
- Subjects
010506 paleontology ,010504 meteorology & atmospheric sciences ,glacier surge mechanism ,Ice stream ,STREAMS ,Mechanics ,Slip (materials science) ,01 natural sciences ,Vertical integration ,till deformation ,Physics::Fluid Dynamics ,West Antarctica ,sheet model pism ,Shear (geology) ,Shear stress ,Boundary value problem ,Geomorphology ,Scaling ,Geology ,0105 earth and related environmental sciences ,Earth-Surface Processes - Abstract
One challenge in improving our understanding of ice-stream dynamics is to develop models of the spatial and temporal transition from ice-sheet to ice-stream flow. We address this with a new, vertically integrated, higher-order formulation for ice-sheet dynamics that captures the leading-order physics of low aspect ratio, viscous fluid flow, regardless of the amount of slip at the bed. The theory introduces a parameter, λ, which approximates the ratio of the basal stress to the shear stress scale, providing a measure of the relative importance of sliding and internal deformation. Our model is able to simultaneously describe the dynamics of both a slow-moving sheet and rapidly flowing ice streams. To test the formulation, we apply a triple-valued sliding law as the basal boundary condition and obtain numerical solutions that can be compared with previous work. We investigate the sensitivity of flow regimes and shear margin width to parameter variation, deriving a scaling for the latter. We also consider a double-valued sliding law, which enforces a constant, low basal stress beneath the ice stream. Comparisons of the resultant stress fields illustrate the different stress balances that can maintain ice-stream flow.
- Published
- 2016
44. The complex Lorenz equations
- Author
-
John Gibbon, Mark McGuinness, and Andrew C. Fowler
- Subjects
Hopf bifurcation ,Period-doubling bifurcation ,Mathematical analysis ,Statistical and Nonlinear Physics ,Saddle-node bifurcation ,Lorenz system ,Condensed Matter Physics ,Bifurcation diagram ,symbols.namesake ,Bifurcation theory ,Transcritical bifurcation ,symbols ,Infinite-period bifurcation ,Mathematics - Abstract
We have undertaken a study of the complex Lorenz equations x = −σx + σy . y = (r − z)x − ay . z = −bz + 12(x∗y + xy∗) . where x and y are complex and z is real. The complex parameters r and a are defined by r = r1 + ir2; a = 1 − ie and σ and b are real. Behaviour remarkably different from the real Lorenz model occurs. Only the origin is a fixed point except for the special case e + r2 = 0. We have been able to determine analytically two critical values of r1, namely r1c and r1c . The origin is a stable fixed point for 0 r1c, a Hopf bifurcation to a limit cycle occurs. We have an exact analytic solution for this limit cycle which is always stable if σ + 1 then this limit is only stable in the region r1c rlc, a transition to a finite amplitude oscillation about the limit cycle occurs. The nature of this bifurcation is studied in detail by using a multiple time scale analysis to derive the Stuart-Landau amplitude equation from the original equations in a frame rotating with the limit cycle frequency. This latter bifurcation is either a sub- or super-critical Hopf-like bifurcation to a doubly periodic motion, the direction of bifurcation depending on the parameter values. The nature of the bifurcation is complicated by the existence of a zero eigenvalue.
- Published
- 2016
45. Network development in biological gels: role in lymphatic vessel development
- Author
-
Tiina Roose and Andrew C. Fowler
- Subjects
Quantitative Biology::Tissues and Organs ,General Mathematics ,Immunology ,Biocompatible Materials ,Models, Biological ,General Biochemistry, Genetics and Molecular Biology ,Quantitative Biology::Cell Behavior ,Diffusion ,Mice ,Rheology ,Implants, Experimental ,Phase (matter) ,Animals ,Computer Simulation ,Statistical physics ,Diffusion (business) ,Lymphangiogenesis ,General Environmental Science ,Mathematics ,Lymphatic Vessels ,Pharmacology ,Mathematical and theoretical biology ,Partial differential equation ,Steady state ,General Neuroscience ,Mechanics ,Computational Theory and Mathematics ,Volume fraction ,Thermodynamics ,Collagen ,Protons ,General Agricultural and Biological Sciences ,Reduction (mathematics) ,Gels ,Algorithms - Abstract
In this paper, we present a model that explains the prepatterning of lymphatic vessel morphology in collagen gels. This model is derived using the theory of two phase rubber material due to Flory and coworkers and it consists of two coupled fourth order partial differential equations describing the evolution of the collagen volume fraction, and the evolution of the proton concentration in a collagen implant; as described in exper- iments of Boardman and Swartz (Circ. Res. 92, 801-808, 2003). Using linear stability analysis, we find that above a critical level of proton concentration, spatial patterns form due to small perturbations in the initially uniform steady state. Using a long wavelength reduction, we can reduce the two coupled partial differential equations to one fourth order equation that is very similar to the Cahn-Hilliard equation; however, it has more com- plex nonlinearities and degeneracies. We present the results of numerical simulations and discuss the biological implications of our model.
- Published
- 2016
46. The real and complex Lorenz equations and their relevance to physical systems
- Author
-
Mark McGuinness, Andrew C. Fowler, and John Gibbon
- Subjects
Relation (database) ,Dynamical systems theory ,Mathematical analysis ,Physical system ,Applied mathematics ,Statistical and Nonlinear Physics ,Relevance (information retrieval) ,Lorenz system ,Condensed Matter Physics ,Mathematics - Abstract
We summarize some recently obtained results on real and complex Lorenz equations and discuss their possible significance in relation to real fluid dynamical processes.
- Published
- 2016
47. A note on the derivation of the quasi-geostrophic potential vorticity equation
- Author
-
Andrew C. Fowler
- Subjects
Omega equation ,Computational Mechanics ,Stratification (water) ,Astronomy and Astrophysics ,Vorticity ,Positive vorticity advection ,Geophysics ,Classical mechanics ,Vorticity equation ,Geochemistry and Petrology ,Mechanics of Materials ,Potential vorticity ,Geostrophic wind ,Physics::Atmospheric and Oceanic Physics ,Mathematics - Abstract
The derivation of the quasi-geostrophic potential vorticity equation of mathematical meteorology is usually done using fairly sophisticated techniques of perturbation theory, but stops short of deriving self-consistently the stratification parameter of the mean atmospheric state. In this note we suggest how this should be done within the confines of the theory, and as a consequence we raise the possibility that the atmosphere could become globally unstable, with dramatic consequences. © 2011 Taylor and Francis.
- Published
- 2016
48. Multiple reaction fronts in the oxidation/reduction of iron-rich uranium ores
- Author
-
P. S. Hagan, Andrew C. Fowler, and J. N. Dewynne
- Subjects
inorganic chemicals ,Mineralization (geology) ,Chemistry ,Applied Mathematics ,digestive, oral, and skin physiology ,technology, industry, and agriculture ,Geochemistry ,chemistry.chemical_element ,Uranium ,complex mixtures ,Redox ,Chemical reaction ,Uranium ore ,Uraninite ,Dissolution ,Waste disposal - Abstract
This paper describes the oxidation of iron-rich uranium-bearing rocks by infiltration of ground-water. A reaction-diffusion model is set up to describe the sequence of reactions involving iron oxidation, uranium oxidation and reduction, sulphuric acid production, and dissolution of the host rock that occur. On a geological timescale of millions of years, the reactions occur very fast in very thin reaction fronts. It is shown that the redox front that separates oxidized (orange) rock from reduced (black) rock must actually consist of two separate fronts that move together, at which the two separate processes of uranium oxidation and iron reduction occur, respectively. Between these fronts, a high concentration of uranium is predicted. The mechanics of this process are not specific to uranium-mediated redox reactions, but apply generally and may be used to explain the formation of concentrated ore deposits in extended veins. On the long timescales of relevance, a quasi-static response results, and the probl...
- Published
- 2016
49. The motion of ice stream margins
- Author
-
Andrew C. Fowler
- Subjects
geography ,geography.geographical_feature_category ,Mechanical Engineering ,Ice stream ,Pressure ridge ,Condensed Matter Physics ,Ice wedge ,Sea ice growth processes ,Mechanics of Materials ,Margin (machine learning) ,Pancake ice ,Ice sheet ,Geomorphology ,Sea level - Abstract
The recent article by Schoof (J. Fluid Mech., vol. 712, 2012, pp. 552–578) provides a technically demanding solution to the problem of determining ice-stream margin evolution. It is important in opening the way to the future theoretical description of how the ice sheets will melt and sea level will rise as the climate warms. But the sophistication of the mathematics should not operate as a mask to an examination of the credibility of the model.
- Published
- 2016
50. Asymptotic methods for delay equations
- Author
-
Andrew C. Fowler
- Subjects
Singular perturbation ,Differential equation ,General Mathematics ,Ordinary differential equation ,Mathematical analysis ,General Engineering ,Delay differential equation ,Logistic function ,Wave equation ,Epidemic model ,Method of matched asymptotic expansions ,Mathematics - Abstract
Asymptotic methods for singularly perturbed delay differential equations are in many ways more challenging to implement than for ordinary differential equations. In this paper, four examples of delayed systems which occur in practical models are considered: the delayed recruitment equation, relaxation oscillations in stem cell control, the delayed logistic equation, and density wave oscillations in boilers, the last of these being a problem of concern in engineering two-phase flows. The ways in which asymptotic methods can be used vary from the straightforward to the perverse, and illustrate the general technical difficulties that delay equations provide for the central technique of the applied mathematician. © Springer 2006.
- Published
- 2016
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