123 results on '"Anna Saran"'
Search Results
2. Severe bronchiectasis and inflammatory lung disease in a patient with anorexia nervosa and severe and enduring malnutrition - a case report
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Anna Saran, Firszt Oliver, Tomasz Łosień, Monika Kulig-Kulesza, Jolanta Myga-Porosiło, Ewa Kluczewska, and Dariusz Ziora
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Anorexia nervosa ,Emphysema ,Bronchiectasis ,Case report ,Psychiatry ,RC435-571 - Abstract
Abstract Background Persistent structural changes of the lungs in anorexia nervosa (AN) patients are rarely described in contemporary medical literature. The objective of our paper is to report a rare case of severe bronchiectasis and inflammatory changes to the lungs resulting from chronic malnutrition in a AN patient. Case presentation We describe a patient with severe inflammatory lung disease caused by malnutrition, resulting in persistent bronchiectasis accompanying AN. We performed an analysis of the patient’s medical records including radiological findings and laboratory results. A review of available literature shows very little data available on this topic. Conclusion Bronchiectasis and other structural changes of the lungs are rare, but severe complications of severe, chronic malnutrition. As exemplified by our case report, they may require extensive differential diagnosis and pose a significant clinical challenge due to their non-reversible character. A successful treatment relies heavily on the patient’s compliance and may be hard to achieve. Clinicians managing patients with anorexia nervosa should be wary of early respiratory tract dysfunction-related symptoms and always consider malnutrition bronchiectasis as a differential diagnosis option.
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- 2020
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3. Postprandial Abdominal Pain Caused by Gastroptosis—A Case Report
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Anna Staszewska, Anna Jarzumbek, Anna Saran, Sylwia Gierak-Firszt, and Jaroslaw Kwiecien
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gastroptosis ,Glenard’s disease ,abdominal pain ,Pediatrics ,RJ1-570 - Abstract
Gastroptosis is a condition in which the stomach is displaced downward and is a condition affects the spontaneous muscle mobility in the stomach. The reason for its current prevalence remains unclear as the medical literature is scarce on the condition in children. In this study, we describe the case of a 17-year-old girl suffering from chronic, position-dependent epigastric pain. The symptoms were observed during post-meal activity, with a significant increase in pain intensity while in an upright position. An inferior stomach displacement was noted in an upper gastrointestinal X-ray study using barium.
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- 2023
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4. A combined ANXA2-NDRG1-STAT1 gene signature predicts response to chemoradiotherapy in cervical cancer
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Marianna Buttarelli, Gabriele Babini, Giuseppina Raspaglio, Flavia Filippetti, Alessandra Battaglia, Alessandra Ciucci, Gabriella Ferrandina, Marco Petrillo, Carmela Marino, Mariateresa Mancuso, Anna Saran, Maria Elena Villani, Angiola Desiderio, Chiara D’Ambrosio, Andrea Scaloni, Giovanni Scambia, and Daniela Gallo
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Cervix ,LACC ,Molecular biomarkers ,Personalized medicine ,Proteomics ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Abstract Background A better understanding of locally advanced cervical cancer (LACC) is mandatory for further improving the rates of disease control, since a significant proportion of patients still fail to respond or undergo relapse after concurrent chemoradiation treatment (CRT), and survival for these patients has generally remained poor. Methods To identify specific markers of CRT response, we compared pretreatment biopsies from LACC patients with pathological complete response (sensitive) with those from patients showing macroscopic residual tumor (resistant) after neoadjuvant CRT, using a proteomic approach integrated with gene expression profiling. The study of the underpinning mechanisms of chemoradiation response was carried out through in vitro models of cervical cancer. Results We identified annexin A2 (ANXA2), N-myc downstream regulated gene 1 (NDRG1) and signal transducer and activator of transcription 1 (STAT1) as biomarkers of LACC patients’ responsiveness to CRT. The dataset collected through qPCR on these genes was used as training dataset to implement a Random Forest algorithm able to predict the response of new patients to this treatment. Mechanistic investigations demonstrated the key role of the identified genes in the balance between death and survival of tumor cells. Conclusions Our results define a predictive gene signature that can help in cervical cancer patient stratification, thus providing a useful tool towards more personalized treatment modalities.
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- 2019
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5. Micro-RNA and Proteomic Profiles of Plasma-Derived Exosomes from Irradiated Mice Reveal Molecular Changes Preventing Apoptosis in Neonatal Cerebellum
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Simonetta Pazzaglia, Barbara Tanno, Ilaria De Stefano, Paola Giardullo, Simona Leonardi, Caterina Merla, Gabriele Babini, Seda Tuncay Cagatay, Ammar Mayah, Munira Kadhim, Fiona M. Lyng, Christine von Toerne, Zohaib N. Khan, Prabal Subedi, Soile Tapio, Anna Saran, and Mariateresa Mancuso
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exosomes ,miRNome ,proteomics ,ionizing radiation ,neonatal cerebellum ,apoptosis ,Biology (General) ,QH301-705.5 ,Chemistry ,QD1-999 - Abstract
Cell communication via exosomes is capable of influencing cell fate in stress situations such as exposure to ionizing radiation. In vitro and in vivo studies have shown that exosomes might play a role in out-of-target radiation effects by carrying molecular signaling mediators of radiation damage, as well as opposite protective functions resulting in resistance to radiotherapy. However, a global understanding of exosomes and their radiation-induced regulation, especially within the context of an intact mammalian organism, has been lacking. In this in vivo study, we demonstrate that, compared to sham-irradiated (SI) mice, a distinct pattern of proteins and miRNAs is found packaged into circulating plasma exosomes after whole-body and partial-body irradiation (WBI and PBI) with 2 Gy X-rays. A high number of deregulated proteins (59% of WBI and 67% of PBI) was found in the exosomes of irradiated mice. In total, 57 and 13 miRNAs were deregulated in WBI and PBI groups, respectively, suggesting that the miRNA cargo is influenced by the tissue volume exposed to radiation. In addition, five miRNAs (miR-99b-3p, miR-200a-3p, miR-200a, miR-182-5p, miR-182) were commonly overexpressed in the exosomes from the WBI and PBI groups. In this study, particular emphasis was also given to the determination of the in vivo effect of exosome transfer by intracranial injection in the highly radiosensitive neonatal cerebellum at postnatal day 3. In accordance with a major overall anti-apoptotic function of the commonly deregulated miRNAs, here, we report that exosomes from the plasma of irradiated mice, especially in the case of WBI, prevent radiation-induced apoptosis, thus holding promise for exosome-based future therapeutic applications against radiation injury.
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- 2022
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6. Out-of-Field Hippocampus from Partial-Body Irradiated Mice Displays Changes in Multi-Omics Profile and Defects in Neurogenesis
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Simonetta Pazzaglia, Barbara Tanno, Francesca Antonelli, Paola Giardullo, Gabriele Babini, Prabal Subedi, Omid Azimzadeh, Zohaib N. Khan, Kateryna Oleksenko, Fabian Metzger, Christine von Toerne, Damien Traynor, Dinesh Medipally, Aidan D. Meade, Munira Kadhim, Fiona M. Lyng, Soile Tapio, Anna Saran, and Mariateresa Mancuso
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MiRNome ,proteomics ,metabolomics ,dentate gyrus ,radiation ,hippocampal neurogenesis ,Biology (General) ,QH301-705.5 ,Chemistry ,QD1-999 - Abstract
The brain undergoes ionizing radiation exposure in many clinical situations, particularly during radiotherapy for brain tumors. The critical role of the hippocampus in the pathogenesis of radiation-induced neurocognitive dysfunction is well recognized. The goal of this study is to test the potential contribution of non-targeted effects in the detrimental response of the hippocampus to irradiation and to elucidate the mechanisms involved. C57Bl/6 mice were whole body (WBI) or partial body (PBI) irradiated with 0.1 or 2.0 Gy of X-rays or sham irradiated. PBI consisted of the exposure of the lower third of the mouse body, whilst the upper two thirds were shielded. Hippocampi were collected 15 days or 6 months post-irradiation and a multi-omics approach was adopted to assess the molecular changes in non-coding RNAs, proteins and metabolic levels, as well as histological changes in the rate of hippocampal neurogenesis. Notably, at 2.0 Gy the pattern of early molecular and histopathological changes induced in the hippocampus at 15 days following PBI were similar in quality and quantity to the effects induced by WBI, thus providing a proof of principle of the existence of out-of-target radiation response in the hippocampus of conventional mice. We detected major alterations in DAG/IP3 and TGF-β signaling pathways as well as in the expression of proteins involved in the regulation of long-term neuronal synaptic plasticity and synapse organization, coupled with defects in neural stem cells self-renewal in the hippocampal dentate gyrus. However, compared to the persistence of the WBI effects, most of the PBI effects were only transient and tended to decrease at 6 months post-irradiation, indicating important mechanistic difference. On the contrary, at low dose we identified a progressive accumulation of molecular defects that tended to manifest at later post-irradiation times. These data, indicating that both targeted and non-targeted radiation effects might contribute to the pathogenesis of hippocampal radiation-damage, have general implications for human health.
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- 2021
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7. Phenotypic and Functional Characteristics of Exosomes Derived from Irradiated Mouse Organs and Their Role in the Mechanisms Driving Non-Targeted Effects
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Seda Tuncay Cagatay, Ammar Mayah, Mariateresa Mancuso, Paola Giardullo, Simonetta Pazzaglia, Anna Saran, Amuthachelvi Daniel, Damien Traynor, Aidan D. Meade, Fiona Lyng, Soile Tapio, and Munira Kadhim
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exosomes ,ionising radiation ,non-targeted effects ,signalling ,Biology (General) ,QH301-705.5 ,Chemistry ,QD1-999 - Abstract
Molecular communication between irradiated and unirradiated neighbouring cells initiates radiation-induced bystander effects (RIBE) and out-of-field (abscopal) effects which are both an example of the non-targeted effects (NTE) of ionising radiation (IR). Exosomes are small membrane vesicles of endosomal origin and newly identified mediators of NTE. Although exosome-mediated changes are well documented in radiation therapy and oncology, there is a lack of knowledge regarding the role of exosomes derived from inside and outside the radiation field in the early and delayed induction of NTE following IR. Therefore, here we investigated the changes in exosome profile and the role of exosomes as possible molecular signalling mediators of radiation damage. Exosomes derived from organs of whole body irradiated (WBI) or partial body irradiated (PBI) mice after 24 h and 15 days post-irradiation were transferred to recipient mouse embryonic fibroblast (MEF) cells and changes in cellular viability, DNA damage and calcium, reactive oxygen species and nitric oxide signalling were evaluated compared to that of MEF cells treated with exosomes derived from unirradiated mice. Taken together, our results show that whole and partial-body irradiation increases the number of exosomes, instigating changes in exosome-treated MEF cells, depending on the source organ and time after exposure.
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- 2020
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8. Alterations in Morphology and Adult Neurogenesis in the Dentate Gyrus of Patched1 Heterozygous Mice
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Francesca Antonelli, Arianna Casciati, Mirella Tanori, Barbara Tanno, Maria V. Linares-Vidal, Noemi Serra, Monserrat Bellés, Alessandro Pannicelli, Anna Saran, and Simonetta Pazzaglia
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sonic hedgehog pathway ,hippocampal neurogenesis and neuronal lineage differentiation ,notch pathway ,TLX nuclear receptor ,expression profiles of neurogenesis-related genes ,behavioral effects ,Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Abstract
Many genes controlling neuronal development also regulate adult neurogenesis. We investigated in vivo the effect of Sonic hedgehog (Shh) signaling activation on patterning and neurogenesis of the hippocampus and behavior of Patched1 (Ptch1) heterozygous mice (Ptch1+/−). We demonstrated for the first time, that Ptch1+/− mice exhibit morphological, cellular and molecular alterations in the dentate gyrus (DG), including elongation and reduced width of the DG as well as deregulations at multiple steps during lineage progression from neural stem cells to neurons. By using stage-specific cellular markers, we detected reduction of quiescent stem cells, newborn neurons and astrocytes and accumulation of proliferating intermediate progenitors, indicative of defects in the dynamic transition among neural stages. Phenotypic alterations in Ptch1+/− mice were accompanied by expression changes in Notch pathway downstream components and TLX nuclear receptor, as well as perturbations in inflammatory and synaptic networks and mouse behavior, pointing to complex biological interactions and highlighting cooperation between Shh and Notch signaling in the regulation of neurogenesis.
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- 2018
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9. N6-isopentenyladenosine and analogs activate the NRF2-mediated antioxidant response
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Alice Dassano, Mariateresa Mancuso, Paola Giardullo, Loris De Cecco, Pierangela Ciuffreda, Enzo Santaniello, Anna Saran, Tommaso A. Dragani, and Francesca Colombo
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Modified nucleosides ,Gene expression ,Reactive oxygen species ,Anti-inflammatory drug ,Pathway analysis ,Medicine (General) ,R5-920 ,Biology (General) ,QH301-705.5 - Abstract
N6-isopentenyladenosine (i6A), a naturally occurring modified nucleoside, inhibits the proliferation of human tumor cell lines in vitro, but its mechanism of action remains unclear. Treatment of MCF7 human breast adenocarcinoma cells with i6A or with three synthetic analogs (allyl6A, benzyl6A, and butyl6A) inhibited growth and altered gene expression. About 60% of the genes that were differentially expressed in response to i6A treatment were also modulated by the analogs, and pathway enrichment analysis identified the NRF2-mediated oxidative stress response as being significantly modulated by all four compounds. Luciferase reporter gene assays in transfected MCF7 cells confirmed that i6A activates the transcription factor NRF2. Assays for cellular production of reactive oxygen species indicated that i6A and analogs had antioxidant effects, reducing basal levels and inhibiting the H2O2- or 12-O-tetradecanoylphorbol-13-acetate (TPA)-induced production in MCF7 or dHL-60 (HL-60 cells induced to differentiate along the neutrophilic lineage) cell lines, respectively. In vivo, topical application of i6A or benzyl6A to mouse ears prior to TPA stimulation lessened the inflammatory response and significantly reduced the number of infiltrating neutrophils. These results suggest that i6A and analogs trigger a cellular response against oxidative stress and open the possibility of i6A and benzyl6A being used as topical anti-inflammatory drugs.
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- 2014
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10. Hyperacetylation of Cardiac Mitochondrial Proteins Is Associated with Metabolic Impairment and Sirtuin Downregulation after Chronic Total Body Irradiation of ApoE -/- Mice
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Zarko Barjaktarovic, Juliane Merl-Pham, Ignacia Braga-Tanaka, Satoshi Tanaka, Stefanie M. Hauck, Anna Saran, Mariateresa Mancuso, Michael J. Atkinson, Soile Tapio, and Omid Azimzadeh
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ionising radiation ,chronic exposure ,tbi ,acetylome ,proteomics ,sirtuins ,heart ,mitochondria ,cardiovascular disease ,ppar alpha ,Biology (General) ,QH301-705.5 ,Chemistry ,QD1-999 - Abstract
Chronic exposure to low-dose ionizing radiation is associated with an increased risk of cardiovascular disease. Alteration in energy metabolism has been suggested to contribute to radiation-induced heart pathology, mitochondrial dysfunction being a hallmark of this disease. The goal of this study was to investigate the regulatory role of acetylation in heart mitochondria in the long-term response to chronic radiation. ApoE-deficient C57Bl/6J mice were exposed to low-dose-rate (20 mGy/day) gamma radiation for 300 days, resulting in a cumulative total body dose of 6.0 Gy. Heart mitochondria were isolated and analyzed using quantitative proteomics. Radiation-induced proteome and acetylome alterations were further validated using immunoblotting, enzyme activity assays, and ELISA. In total, 71 proteins showed peptides with a changed acetylation status following irradiation. The great majority (94%) of the hyperacetylated proteins were involved in the TCA cycle, fatty acid oxidation, oxidative stress response and sirtuin pathway. The elevated acetylation patterns coincided with reduced activity of mitochondrial sirtuins, increased the level of Acetyl-CoA, and were accompanied by inactivation of major cardiac metabolic regulators PGC-1 alpha and PPAR alpha. These observations suggest that the changes in mitochondrial acetylation after irradiation is associated with impairment of heart metabolism. We propose a novel mechanism involved in the development of late cardiac damage following chronic irradiation.
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- 2019
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11. Gender effect in experimental models of human medulloblastoma: does the estrogen receptor β signaling play a role?
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Alessandra Ciucci, Daniela Meco, Ilaria De Stefano, Daniele Travaglia, Gian Franco Zannoni, Giovanni Scambia, Riccardo Riccardi, Anna Saran, Mariateresa Mancuso, and Daniela Gallo
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Medicine ,Science - Abstract
The male-to-female sex ratio for medulloblastoma (MB) is approximately 1.5∶1, female gender being also a favorable prognostic factor. This study aimed at evaluating the impact of gender on MB tumorigenesis.In vitro activity of 17β-estradiol (E2), DPN [2,3-bis(4-hydroxyphenyl)-propionitrile, a selective estrogen receptor β (ERβ)-agonist], PPT [4,4',4″-(4-Propyl-[1H]-pyrazole-1,3,5-triyl) trisphenol, a selective ERα-agonist] or DHT (5 alpha-dihydrotestosterone) was evaluated in three human MB cell lines. D283 Med cells were transplanted into athymic mice.A significant expression of ERβ, with little or no ERα, and low AR (androgen receptor) was found in MB cell lines. The compounds tested did not affect cell proliferation. In vivo, we observed a significantly lower growth of D283 Med in nude female mice compared to males. At microscopic examination, tumors from females showed a shift towards differentiation, as evaluated by lower nestin, and higher NSE (neuron-specific enolase) and GFAP (glial fibrillary acidic protein) expression compared to males. Tumors from females also showed lower Ki67 and p53 expression. The wild-type ERβ protein (ERβ1) was lost in male tumors, while it was a permanent feature in females, and a strong negative correlation was found between Ki67 and ERβ1 expression. Conversely, tumor levels of ERβ2 and ERβ5 did not significantly differ between genders. Increased levels of cyclin-dependent kinase inhibitor p21 were observed in females, suggesting that estrogen may decrease tumor growth through blocking cell cycle progression. An inhibition of the insulin-like growth factor I (IGF-I) signaling was also evident in females.We provides mechanistic evidence supporting the idea that ERβ1 signaling may have pro-differentiation and tumor suppressive function in medulloblastomas.
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- 2014
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12. Assessment of the level of COVID-19 anxiety perceived by Internet users and factors affecting its increase at the first stage of pandemic in Poland
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Magdalena Graca, Monika Kulig-Kulesza, Dawid Wojtyczka, ANNA SARAN, Alicja Sobieraj, and Ewa Kluczewska
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General Earth and Planetary Sciences ,General Environmental Science - Published
- 2022
13. Is the Identification of Multiple Infantile Cutaneous Hemangiomas Always a Definitive Diagnosis? A Case Report of an Infant with a Multifocal Hepatic Hemangioma (MHH)
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Jagoda Baranowska, Wiktoria Boral, Anna Jarzumbek, Ewa Kluczewska, Anna Saran, Jarosław Kwiecień, Katarzyna Górowska-Kowolik, Andrzej Grabowski, Anna Sienko, and Katarzyna Bąk-Drabik
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Multifocal hepatic hemangiomas (MHHs) are the most common benign vascular tumours of the liver that are detected in children with concomitant multiple infantile hemangiomas. They still pose a diagnostic problem for GPs and are thus often detected far too late, due to their low prevalence rates. MHHs are usually undetectable at birth, usually detected within the first few weeks of life when the lesions proliferate. The heterogeneity of the lesions and the presence of comorbidities make often the management of infantile hepatic hemangiomas a true challenge, also for highly specialised medical professionals. Ultrasound (USG) should be the imaging examination performed in the first instance in search for vascular anomalies in children. In pharmacotherapy, the first choice treatment is propranolol and prednisone, administered orally. Invasive treatment is usually indicated in symptomatic or progressive multiple hepatic hemangiomas only. Recently published studies show a significant decrease in the incidence rate of the disease, which now ranges between 11% and 18% for treated and untreated hepatic hemangiomas, respectively.
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- 2023
14. Supplementary Figure S2 from MK-4101, a Potent Inhibitor of the Hedgehog Pathway, Is Highly Active against Medulloblastoma and Basal Cell Carcinoma
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Simonetta Pazzaglia, Christian Steinkühler, Lucia Di Marcotullio, Armin Lahm, Anna Saran, Mariateresa Mancuso, Romina Alfonsi, Emanuela Pasquali, Mirella Tanori, Romina Sasso, Fabrizio Colaceci, Mirko Brunetti, and Gessica Filocamo
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Nucleotide sequence of the Smo gene around the triplet coding for the D477 position
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- 2023
15. Supplementary Material and Methods and Figure Legends from MK-4101, a Potent Inhibitor of the Hedgehog Pathway, Is Highly Active against Medulloblastoma and Basal Cell Carcinoma
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Simonetta Pazzaglia, Christian Steinkühler, Lucia Di Marcotullio, Armin Lahm, Anna Saran, Mariateresa Mancuso, Romina Alfonsi, Emanuela Pasquali, Mirella Tanori, Romina Sasso, Fabrizio Colaceci, Mirko Brunetti, and Gessica Filocamo
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Supplementary Material and Methods and Figure Legends
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- 2023
16. Supplementary Table S1 from MK-4101, a Potent Inhibitor of the Hedgehog Pathway, Is Highly Active against Medulloblastoma and Basal Cell Carcinoma
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Simonetta Pazzaglia, Christian Steinkühler, Lucia Di Marcotullio, Armin Lahm, Anna Saran, Mariateresa Mancuso, Romina Alfonsi, Emanuela Pasquali, Mirella Tanori, Romina Sasso, Fabrizio Colaceci, Mirko Brunetti, and Gessica Filocamo
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Gene expression intensity data. Values shown represent average values for the various vehicle or treatment groups.
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- 2023
17. MiRNA-Mediated Fibrosis in the Out-of-Target Heart following Partial-Body Irradiation
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Barbara Tanno, Flavia Novelli, Simona Leonardi, Caterina Merla, Gabriele Babini, Paola Giardullo, Munira Kadhim, Damien Traynor, Dinesh Medipally, Aidan Meade, Fiona Lyng, Soile Tapio, Luca Marchetti, Anna Saran, Simonetta Pazzaglia, Mariateresa Mancuso, and SEPARATE project, Euratom Research and Training Program 2014–2018, in the framework of CONCERT EJP (grant agreement No. 662287).
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Cancer Research ,Mirnome ,Raman Spectroscopy ,Abscopal Effect ,Cardiac Fibrosis ,Mir-1 ,Mir-133a ,Oncology ,abscopal effect ,Raman spectroscopy ,cardiac fibrosis ,Medicine and Health Sciences ,miRNome ,miR-1 ,mir-133a - Abstract
A causal association between radiation exposure and various types of non-malignant diseases, especially cardiovascular diseases, has been extensively reported [1,2]. The risks of radiation-induced heart disease (RIHD) were described in therapeutically exposed cohorts of patients with thoracic tumors in which a high incidence of long-term complications (i.e., pericarditis, cardiomyopathy, coronary artery disease, valvular heart disease, conduction abnormalities and myocardial fibrosis) increased the risk of heart-disease-related mortality [3]. Patients who received post-mastectomy radiotherapy for left-sided breast cancer were at a 2–3-time higher risk of developing cardiovascular disease, due to the apex and anterior wall of the heart being exposed to doses of radiation between 1 and 5 Gy on average [4]. Nevertheless, at a median follow-up of 8 years, the risk of RIHD was not associated with the laterality of the irradiated breast [5]. An increased risk for cardiovascular diseases, especially stroke and heart attack, also resulted from epidemiological studies of A-bomb survivors [6] as well as occupationally exposed workers [7]. At these moderate doses (0.5–5 Gy), the mechanisms of action seem to especially involve atherosclerosis or vascular injury. Many animal studies support such evidence, indicating increased oxidative stress and the promotion of inflammation as possible mechanisms by which radiation promotes atherogenesis [8]. Cardiac fibrosis and hypertrophy were also observed after the irradiation of mice with 0.5 Gy of protons or 0.15 Gy of 56Fe ions, at late time points.
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- 2022
18. Cancer risk from low dose radiation in Ptch1/ mice with inactive DNA repair systems: Therapeutic implications for medulloblastoma
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I. De Stefano, Simona Leonardi, Paola Giardullo, Barbara Tanno, M. Mancuso, Simonetta Pazzaglia, Arianna Casciati, Francesca Antonelli, Anna Saran, Mirella Tanori, Alessandro Pannicelli, Emanuela Pasquali, Tanori, M., Pannicelli, A., Pasquali, E., Casciati, A., Antonelli, F., Giardullo, P., Leonardi, S., Tanno, B., De Stefano, I., Saran, A., Mancuso, M., and Pazzaglia, S.
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DNA End-Joining Repair ,Neoplasms, Radiation-Induced ,Cell cycle checkpoint ,DNA Repair ,Carcinogenesis ,DNA-Activated Protein Kinase ,DNA Helicase ,medicine.disease_cause ,Biochemistry ,Mice ,0302 clinical medicine ,Neoplasms ,Molecular Targeted Therapy ,Homologous Recombination ,DNA-PKcs ,NU7441 ,Rad54 ,Targeted therapies ,Tumorigenesis ,Animals ,Cell Line, Tumor ,Cerebellar Neoplasms ,DNA Damage ,DNA Helicases ,DNA-Binding Proteins ,Dose-Response Relationship, Radiation ,Humans ,Medulloblastoma ,Mutation ,Nuclear Proteins ,Patched-1 Receptor ,Risk ,X-Rays ,Carcinogenesi ,Nuclear Protein ,0303 health sciences ,Tumor ,Radiation ,DNA-PKc ,030220 oncology & carcinogenesis ,Human ,DNA repair ,DNA damage ,DNA-Binding Protein ,Biology ,Cell Line ,Dose-Response Relationship ,03 medical and health sciences ,medicine ,Molecular Biology ,030304 developmental biology ,Tumorigenesi ,Animal ,Cerebellar Neoplasm ,Cell Biology ,enzymes and coenzymes (carbohydrates) ,Radiation-Induced ,Apoptosis ,Cancer research ,Targeted therapie ,Homologous recombination - Abstract
DSBs are harmful lesions produced through endogenous metabolism or by exogenous agents such as ionizing radiation, that can trigger genomic rearrangements. We have recently shown that exposure to 2 Gy of X-rays has opposite effects on the induction of Shh-dependent MB in NHEJ- and HR-deficient Ptch1+/− mice. In the current study we provide a comprehensive link on the role of HR/NHEJ at low doses (0.042 and 0.25 Gy) from the early molecular changes through DNA damage processing, up to the late consequences of their inactivation on tumorigenesis. Our data indicate a prominent role for HR in genome stability, by preventing spontaneous and radiation-induced oncogenic damage in neural precursors of the cerebellum, the cell of origin of MB. Instead, loss of DNA-PKcs function increased DSBs and apoptosis in neural precursors of the developing cerebellum, leading to killing of tumor initiating cells, and suppression of MB tumorigenesis in DNA-PKcs-/-/Ptch1+/− mice. Pathway analysis demonstrates that DNA-PKcs genetic inactivation confers a remarkable radiation hypersensitivity, as even extremely low radiation doses may deregulate many DDR genes, also triggering p53 pathway activation and cell cycle arrest. Finally, by showing that DNA-PKcs inhibition by NU7441 radiosensitizes human MB cells, our in vitro findings suggest the inclusion of MB in the list of tumors beneficiating from the combination of radiotherapy and DNA-PKcs targeting, holding promise for clinical translation.
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- 2019
19. Severe bronchiectasis and inflammatory lung disease in a patient with anorexia nervosa and severe and enduring malnutrition - a case report
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Monika Kulig-Kulesza, Firszt Oliver, Tomasz Łosień, Ewa Kluczewska, Jolanta Myga-Porosiło, Anna Saran, and Dariusz Ziora
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medicine.medical_specialty ,Inflammatory lung disease ,lcsh:RC435-571 ,03 medical and health sciences ,Behavioral Neuroscience ,0302 clinical medicine ,lcsh:Psychiatry ,Case report ,0502 economics and business ,medicine ,Intensive care medicine ,Emphysema ,Nutrition and Dietetics ,Bronchiectasis ,business.industry ,Medical record ,05 social sciences ,Anorexia nervosa ,medicine.disease ,Psychiatry and Mental health ,Malnutrition ,Eating disorders ,Anorexia nervosa (differential diagnoses) ,050211 marketing ,Differential diagnosis ,business ,030215 immunology ,Medical literature - Abstract
Background Persistent structural changes of the lungs in anorexia nervosa (AN) patients are rarely described in contemporary medical literature. The objective of our paper is to report a rare case of severe bronchiectasis and inflammatory changes to the lungs resulting from chronic malnutrition in a AN patient. Case presentation We describe a patient with severe inflammatory lung disease caused by malnutrition, resulting in persistent bronchiectasis accompanying AN. We performed an analysis of the patient’s medical records including radiological findings and laboratory results. A review of available literature shows very little data available on this topic. Conclusion Bronchiectasis and other structural changes of the lungs are rare, but severe complications of severe, chronic malnutrition. As exemplified by our case report, they may require extensive differential diagnosis and pose a significant clinical challenge due to their non-reversible character. A successful treatment relies heavily on the patient’s compliance and may be hard to achieve. Clinicians managing patients with anorexia nervosa should be wary of early respiratory tract dysfunction-related symptoms and always consider malnutrition bronchiectasis as a differential diagnosis option.
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- 2020
20. Neurocognitive Decline Following Radiotherapy: Mechanisms and Therapeutic Implications
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Anna Saran, Giovanni Briganti, Simonetta Pazzaglia, Mariateresa Mancuso, Pazzaglia, S., Briganti, G., Mancuso, M., and Saran, A.
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Cancer Research ,medicine.medical_treatment ,Cell ,Review ,lcsh:RC254-282 ,03 medical and health sciences ,0302 clinical medicine ,Medicine ,Cognitive decline ,Ionizing radiation ,Neural stem cells ,Neurocognitive effects ,Neurogenesis ,Progenitor ,neural stem cells ,business.industry ,lcsh:Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,Neural stem cell ,3. Good health ,Radiation therapy ,neurocognitive effects ,Neurocognitive effect ,neurogenesis ,medicine.anatomical_structure ,Oncology ,030220 oncology & carcinogenesis ,Stem cell ,business ,ionizing radiation ,Neurocognitive ,Neuroscience ,030217 neurology & neurosurgery - Abstract
The brain undergoes ionizing radiation (IR) exposure in many clinical situations, particularly during radiotherapy for malignant brain tumors. Cranial radiation therapy is related with the hazard of long-term neurocognitive decline. The detrimental ionizing radiation effects on the brain closely correlate with age at treatment, and younger age associates with harsher deficiencies. Radiation has been shown to induce damage in several cell populations of the mouse brain. Indeed, brain exposure causes a dysfunction of the neurogenic niche due to alterations in the neuronal and supporting cell progenitor signaling environment, particularly in the hippocampus—a region of the brain critical to memory and cognition. Consequent deficiencies in rates of generation of new neurons, neural differentiation and apoptotic cell death, lead to neuronal deterioration and lasting repercussions on neurocognitive functions. Besides neural stem cells, mature neural cells and glial cells are recognized IR targets. We will review the current knowledge about radiation-induced damage in stem cells of the brain and discuss potential treatment interventions and therapy methods to prevent and mitigate radiation related cognitive decline.
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- 2020
21. Reviewing the essential roles of remote phenotyping, GWAS and explainable AI in practical marker-assisted selection for drought-tolerant winter wheat breeding
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Ignacio Chang-Brahim, Lukas J. Koppensteiner, Lorenzo Beltrame, Gernot Bodner, Anna Saranti, Jules Salzinger, Phillipp Fanta-Jende, Christoph Sulzbachner, Felix Bruckmüller, Friederike Trognitz, Mina Samad-Zamini, Elisabeth Zechner, Andreas Holzinger, and Eva M. Molin
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drought tolerance ,GWAS ,MAS ,plant breeding ,winter wheat ,XAI ,Plant culture ,SB1-1110 - Abstract
Marker-assisted selection (MAS) plays a crucial role in crop breeding improving the speed and precision of conventional breeding programmes by quickly and reliably identifying and selecting plants with desired traits. However, the efficacy of MAS depends on several prerequisites, with precise phenotyping being a key aspect of any plant breeding programme. Recent advancements in high-throughput remote phenotyping, facilitated by unmanned aerial vehicles coupled to machine learning, offer a non-destructive and efficient alternative to traditional, time-consuming, and labour-intensive methods. Furthermore, MAS relies on knowledge of marker-trait associations, commonly obtained through genome-wide association studies (GWAS), to understand complex traits such as drought tolerance, including yield components and phenology. However, GWAS has limitations that artificial intelligence (AI) has been shown to partially overcome. Additionally, AI and its explainable variants, which ensure transparency and interpretability, are increasingly being used as recognised problem-solving tools throughout the breeding process. Given these rapid technological advancements, this review provides an overview of state-of-the-art methods and processes underlying each MAS, from phenotyping, genotyping and association analyses to the integration of explainable AI along the entire workflow. In this context, we specifically address the challenges and importance of breeding winter wheat for greater drought tolerance with stable yields, as regional droughts during critical developmental stages pose a threat to winter wheat production. Finally, we explore the transition from scientific progress to practical implementation and discuss ways to bridge the gap between cutting-edge developments and breeders, expediting MAS-based winter wheat breeding for drought tolerance.
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- 2024
- Full Text
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22. Out-of-Field Hippocampus from Partial-Body Irradiated Mice Displays Changes in Multi-Omics Profile and Defects in Neurogenesis
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Omid Azimzadeh, Soile Tapio, Prabal Subedi, Dinesh K. R. Medipally, Munira Kadhim, Francesca Antonelli, Damien Traynor, Fiona M. Lyng, Simonetta Pazzaglia, Fabian Metzger, Gabriele Babini, Zohaib N. Khan, Christine von Toerne, Anna Saran, Kateryna Oleksenko, Mariateresa Mancuso, Barbara Tanno, Aidan D. Meade, and Paola Giardullo
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MiRNome ,medicine.medical_specialty ,Proteome ,QH301-705.5 ,Neurogenesis ,Biology ,Hippocampal formation ,Radiation Dosage ,Dentate Gyrus ,Hippocampal Neurogene-sis ,Ionizing Radiation ,Metabolomics ,Mirnome ,Proteomics ,Radiation ,Hippocampus ,Article ,Catalysis ,Inorganic Chemistry ,Pathogenesis ,Mice ,proteomics ,Internal medicine ,medicine ,Animals ,Hippocampus (mythology) ,dentate gyrus ,Biology (General) ,Physical and Theoretical Chemistry ,QD1-999 ,Molecular Biology ,Synapse organization ,Spectroscopy ,Dentate gyrus ,Organic Chemistry ,Computational Biology ,metabolomics ,radiation ,hippocampal neurogenesis ,ionizing radiation ,General Medicine ,Immunohistochemistry ,Neural stem cell ,Computer Science Applications ,Chemistry ,Endocrinology ,Gene Expression Regulation ,Synaptic plasticity ,Metabolome ,Female ,Cranial Irradiation ,Transcriptome ,Signal Transduction - Abstract
The brain undergoes ionizing radiation exposure in many clinical situations, particularly during radiotherapy for brain tumors. The critical role of the hippocampus in the pathogenesis of radiation-induced neurocognitive dysfunction is well recognized. The goal of this study is to test the potential contribution of non-targeted effects in the detrimental response of the hippocampus to irradiation and to elucidate the mechanisms involved. C57Bl/6 mice were whole body (WBI) or partial body (PBI) irradiated with 0.1 or 2.0 Gy of X-rays or sham irradiated. PBI consisted of the exposure of the lower third of the mouse body, whilst the upper two thirds were shielded. Hippocampi were collected 15 days or 6 months post-irradiation and a multi-omics approach was adopted to assess the molecular changes in non-coding RNAs, proteins and metabolic levels, as well as histological changes in the rate of hippocampal neurogenesis. Notably, at 2.0 Gy the pattern of early molecular and histopathological changes induced in the hippocampus at 15 days following PBI were similar in quality and quantity to the effects induced by WBI, thus providing a proof of principle of the existence of out-of-target radiation response in the hippocampus of conventional mice. We detected major alterations in DAG/IP3 and TGF-β signaling pathways as well as in the expression of proteins involved in the regulation of long-term neuronal synaptic plasticity and synapse organization, coupled with defects in neural stem cells self-renewal in the hippocampal dentate gyrus. However, compared to the persistence of the WBI effects, most of the PBI effects were only transient and tended to decrease at 6 months post-irradiation, indicating important mechanistic difference. On the contrary, at low dose we identified a progressive accumulation of molecular defects that tended to manifest at later post-irradiation times. These data, indicating that both targeted and non-targeted radiation effects might contribute to the pathogenesis of hippocampal radiation-damage, have general implications for human health.
- Published
- 2021
23. Chronic low-dose-rate ionising radiation affects the hippocampal phosphoproteome in the ApoE−/− Alzheimer's mouse model
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Soile Tapio, Stefan J. Kempf, Anna Saran, Martin R. Larsen, Ignacia Braga-Tanaka, Zarko Barjaktarovic, Dirk Janik, Frauke Neff, Satoshi Tanaka, and Saran, A.
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0301 basic medicine ,Apolipoprotein E ,Gerontology ,medicine.medical_specialty ,Programmed cell death ,Proteome ,Phosphoproteomics ,Neurogenesis ,Hippocampus ,Hippocampal formation ,Radiation Dosage ,CREB ,Synaptic plasticity ,Ionizing radiation ,Mice ,03 medical and health sciences ,Apolipoproteins E ,Hippocampu ,0302 clinical medicine ,Alzheimer Disease ,Radiation, Ionizing ,Synapse ,Dendritic spine ,Internal medicine ,medicine ,Animals ,Phosphorylation ,Cyclic AMP Response Element-Binding Protein ,Neuronal Plasticity ,biology ,business.industry ,Mice, Inbred C57BL ,Disease Models, Animal ,030104 developmental biology ,Endocrinology ,Oncology ,biology.protein ,Female ,Lipid Peroxidation ,NeuN ,business ,030217 neurology & neurosurgery ,Research Paper ,Signal Transduction - Abstract
Accruing data indicate that radiation-induced consequences resemble pathologies of neurodegenerative diseases such as Alzheimer´s. The aim of this study was to elucidate the effect on hippocampus of chronic low-dose-rate radiation exposure (1 mGy/day or 20 mGy/day) given over 300 days with cumulative doses of 0.3 Gy and 6.0 Gy, respectively. ApoE deficient mutant C57Bl/6 mouse was used as an Alzheimer´s model. Using mass spectrometry, a marked alteration in the phosphoproteome was found at both dose rates. The radiation-induced changes in the phosphoproteome were associated with the control of synaptic plasticity, calcium-dependent signalling and brain metabolism. An inhibition of CREB signalling was found at both dose rates whereas Rac1-Cofilin signalling was found activated only at the lower dose rate. Similarly, the reduction in the number of activated microglia in the molecular layer of hippocampus that paralleled with reduced levels of TNFα expression and lipid peroxidation was significant only at the lower dose rate. Adult neurogenesis, investigated by Ki67, GFAP and NeuN staining, and cell death (activated caspase-3) were not influenced at any dose or dose rate. This study shows that several molecular targets induced by chronic low-dose-rate radiation overlap with those of Alzheimer´s pathology. It may suggest that ionising radiation functions as a contributing risk factor to this neurodegenerative disease.
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- 2016
24. Ex vivo miRNome analysis in Ptch1+/− cerebellum granule cells reveals a subset of miRNAs involved in radiation-induced medulloblastoma
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Barbara Tanno, Andrea Ottolenghi, Mariateresa Mancuso, Paola Giardullo, Anna Saran, Ilaria De Stefano, Emanuela Pasquali, Simona Leonardi, Gabriele Babini, Michael J. Atkinson, Tanno, Barbara, Babini, Gabriele, Leonardi, Simona, Giardullo, Paola, De Stefano, Ilaria, Pasquali, Emanuela, Ottolenghi, Andrea, Atkinson, Michael J, Saran, Anna, and Mancuso, Mariateresa
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0301 basic medicine ,medulloblastoma ,Shh ,Gcps ,X-rays ,Medulloblastoma ,Mirna ,X-ray ,03 medical and health sciences ,Cerebellum ,microRNA ,medicine ,Animals ,Neoplastic transformation ,Gene Regulatory Networks ,Hedgehog Proteins ,Epigenetics ,Sonic hedgehog ,Cerebellar Neoplasms ,miRNA ,Genetics ,Mice, Knockout ,Gene Regulatory Network ,biology ,Animal ,Cerebellar Neoplasm ,Gene Expression Profiling ,MicroRNA ,PTCH1 Gene ,medicine.disease ,GCP ,3. Good health ,Gene expression profiling ,Gene Expression Regulation, Neoplastic ,Patched-1 Receptor ,MicroRNAs ,030104 developmental biology ,Oncology ,PTCH1 ,Animals, Newborn ,Cancer research ,biology.protein ,GCPs ,Transcriptome ,Hedgehog Protein ,Research Paper ,Signal Transduction - Abstract
// Barbara Tanno 1, * , Gabriele Babini 2, * , Simona Leonardi 1 , Paola Giardullo 3, 4 , Ilaria De Stefano 3 , Emanuela Pasquali 1 , Andrea Ottolenghi 2 , Michael J. Atkinson 5 , Anna Saran 1 , Mariateresa Mancuso 1 1 Laboratory of Biomedical Technologies, Agenzia Nazionale per le Nuove Tecnologie, l'Energia e lo Sviluppo Economico Sostenibile (ENEA), Rome, Italy 2 Department of Physics, University of Pavia, Pavia, Italy 3 Department of Radiation Physics, Guglielmo Marconi University, Rome, Italy 4 Department of Sciences, Roma Tre University, Rome, Italy 5 Helmholtz Zentrum Munchen, German Research Center for Environmental Health, Institute of Radiation Biology, Neuherberg, Germany * These authors contributed equally to this work Correspondence to: Mariateresa Mancuso, email: mariateresa.mancuso@enea.it Anna Saran, email: anna.saran@enea.it Keywords: miRNA, X-rays, medulloblastoma, Shh, GCPs Received: June 08, 2016 Accepted: September 05, 2016 Published: September 10, 2016 ABSTRACT It has historically been accepted that incorrectly repaired DNA double strand breaks (DSBs) are the principal lesions of importance regarding mutagenesis, and long-term biological effects associated with ionizing radiation. However, radiation may also cause dysregulation of epigenetic processes that can lead to altered gene function and malignant transformation, and epigenetic alterations are important causes of miRNAs dysregulation in cancer. Patched1 heterozygous ( Ptch1 +/− ) mice, characterized by aberrant activation of the Sonic hedgehog (Shh) signaling pathway, are a well-known murine model of spontaneous and radiation-induced medulloblastoma (MB), a common pediatric brain tumor originating from neural granule cell progenitors (GCPs). The high sensitivity of neonatal Ptch1 +/− mice to radiogenic MB is dependent on deregulation of the Ptch1 gene function. Ptch1 activates a growth and differentiation programme that is a strong candidate for regulation through the non-coding genome. Therefore we carried out miRNA next generation sequencing in ex vivo irradiated and control GCPs, isolated and purified from cerebella of neonatal WT and Ptch1 +/− mice. We identified a subset of miRNAs, namely let-7 family and miR-17~92 cluster members, whose expression is altered in GCPs by radiation alone, or by synergistic interaction of radiation with Shh-deregulation. The same miRNAs were further validated in spontaneous and radiation-induced MBs from Ptch1 +/− mice, confirming persistent deregulation of these miRNAs in the pathogenesis of MB. Our results support the hypothesis that miRNAs dysregulation is associated with radiosensitivity of GCPs and their neoplastic transformation in vivo .
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- 2016
25. Limb amputation through the ages
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Anna Saran, Przemysław Bartnik, Robert Kokot, Wiesław Zielonka, Michał Morawiecki, Katarzyna Wilemska-Kucharzewska, and Marek Kucharzewski
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medicine.medical_specialty ,business.industry ,medicine ,Surgery ,Limb amputation ,business - Published
- 2015
26. SAINT PEREGRIN – THE PATRON SAINT OF LEG ULCER PATIENTS
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Przemysław Bartnik, Katarzyna Wilemska-Kucharzewska, Anna Saran, and Marek Kucharzewski
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medicine.medical_specialty ,Leg ulcer ,business.industry ,General surgery ,Medicine ,Surgery ,SAINT ,business ,Patron saint - Published
- 2015
27. Explainable Artificial Intelligence to Support Work Safety in Forestry: Insights from Two Large Datasets, Open Challenges, and Future Work
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Ferdinand Hoenigsberger, Anna Saranti, Anahid Jalali, Karl Stampfer, and Andreas Holzinger
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explainable AI ,occupational accidents ,forestry ,work safety ,Technology ,Engineering (General). Civil engineering (General) ,TA1-2040 ,Biology (General) ,QH301-705.5 ,Physics ,QC1-999 ,Chemistry ,QD1-999 - Abstract
Forestry work, which is considered one of the most demanding and dangerous professions in the world, is claiming more and more lives. In a country as small as Austria, more than 50 forestry workers are killed in accidents every year, and the number is increasing rapidly. This serves as a catalyst for us to implement more stringent measures for workplace safety in order to achieve the sustainability objective of SDG 3, which focuses on health and well-being. This study contributes to the analysis of occupational accidents and focuses on two large real-world datasets from both the Austrian Federal Forests (ÖBf) and the Austrian Workers’ Compensation Board (AUVA). Decision trees, random forests, and fully connected neural networks are used for the analysis. By exploring different interpretation methods, this study sheds light on the decision-making processes ranging from basic association to causal inference and emphasizes the importance of causal inference in providing actionable insights for accident prevention. This paper contributes to the topic of explainable AI, specifically in its application to occupational safety in forestry. As a result, it introduces novel aspects to decision support systems in this application domain.
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- 2024
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28. Nanog-driven cell-reprogramming and self-renewal maintenance in Ptch1 +/− granule cell precursors after radiation injury
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Barbara Tanno, Ilaria De Stefano, Anna Saran, Paola Giardullo, Mariateresa Mancuso, Simona Leonardi, Emanuela Pasquali, Gabriele Babini, Mancuso, M., Saran, A., Pasquali, E., Leonardi, S., Tanno, B., Tanno, Barbara, Leonardi, Simona, Babini, Gabriele, Giardullo, Paola, De Stefano, Ilaria, Pasquali, Emanuela, Saran, Anna, and Mancuso, Mariateresa
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0301 basic medicine ,Homeobox protein NANOG ,Carcinogenesis ,Cellular differentiation ,lcsh:Medicine ,Apoptosis ,medicine.disease_cause ,Article ,Gene Knockout Techniques ,Mice ,03 medical and health sciences ,Cell Line, Tumor ,Radioresistance ,medicine ,Animals ,Cell Self Renewal ,Sonic hedgehog ,lcsh:Science ,Clonogenic assay ,Medulloblastoma ,Multidisciplinary ,biology ,lcsh:R ,Nanog Homeobox Protein ,Cell Differentiation ,Dose-Response Relationship, Radiation ,Cellular Reprogramming ,medicine.disease ,3. Good health ,Patched-1 Receptor ,030104 developmental biology ,embryonic structures ,Neoplastic Stem Cells ,Cancer research ,biology.protein ,lcsh:Q ,DNA Damage - Abstract
Medulloblastoma (MB) is the most common pediatric brain tumor, comprising four distinct molecular variants, one of which characterized by activation of the Sonic Hedgehog (SHH) pathway, driving 25–30% of sporadic MB. SHH-dependent MBs arise from granule cell precursors (GCPs), are fatal in 40–70% of cases and radioresistance strongly contributes to poor prognosis and tumor recurrence. Patched1 heterozygous (Ptch1+/−) mice, carrying a germ-line heterozygous inactivating mutation in the Ptch1 gene, the Shh receptor and negative regulator of the pathway, are uniquely susceptible to MB development after radiation damage in neonatal cerebellum. Here, we irradiated ex-vivo GCPs isolated from cerebella of neonatal WT and Ptch1+/− mice. Our results highlight a less differentiated status of Ptch1-mutated cells after irradiation, influencing DNA damage response. Increased expression levels of pluripotency genes Nanog, Oct4 and Sal4, together with greater clonogenic potential, clearly suggest that radiation induces expansion of the stem-like cell compartment through cell-reprogramming and self-renewal maintenance, and that this mechanism is strongly dependent on Nanog. These results contribute to clarify the molecular mechanisms that control radiation-induced Shh-mediated tumorigenesis and may suggest Nanog as a potential target to inhibit for adjuvant radiotherapy in treatment of SHH-dependent MB.
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- 2017
29. The role of the Shh signaling pathway in radio-induced cataractogenesis
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Simona Leonardi, Gabriele Babini, Barbara Tanno, Emanuela Pasquali, I De Stefano, Anna Saran, Paola Giardullo, and M. Mancuso
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Ophthalmology ,Chemistry ,Shh signaling pathway ,General Medicine ,Cell biology - Published
- 2017
30. Synthetic lethal genetic interactions between Rad54 and PARP-1 in mouse development and oncogenesis
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Anna Saran, Simona Leonardi, Francesca Antonelli, Gabriele Babini, Emanuela Pasquali, Barbara Tanno, Ilaria De Stefano, Arianna Casciati, Mariateresa Mancuso, Alessandro Pannicelli, Paola Giardullo, Simonetta Pazzaglia, Francesco Berardinelli, Antonella Sgura, Mirella Tanori, Pazzaglia, S., Saran, A., Mancuso, M., Pannicelli, A., Tanno, B., Antonelli, F., Pasquali, E., Leonardi, S., Casciati, A., Tanori, M., Tanori, Mirella, Casciati, Arianna, Berardinelli, Francesco, Leonardi, Simona, Pasquali, Emanuela, Antonelli, Francesca, Tanno, Barbara, Pannicelli, Alessandro, Babini, Gabriele, De Stefano, Ilaria, Sgura, Antonella, Mancuso, Mariateresa, Saran, Anna, and Pazzaglia, Simonetta
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0301 basic medicine ,Senescence ,Expression profiles ,DNA repair ,DNA damage ,Poly ADP ribose polymerase ,Apoptosis ,Biology ,medicine.disease_cause ,03 medical and health sciences ,Germline mutation ,Expression profile ,Cerebellum ,medicine ,Genetics ,Medulloblastoma ,fungi ,Apoptosi ,medicine.disease ,030104 developmental biology ,Oncology ,Cancer research ,Homologous recombination ,Carcinogenesis ,Research Paper - Abstract
// Mirella Tanori 1 , Arianna Casciati 1 , Francesco Berardinelli 2 , Simona Leonardi 1 , Emanuela Pasquali 1 , Francesca Antonelli 1 , Barbara Tanno 1 , Paola Giardullo 2,3 , Alessandro Pannicelli 4 , Gabriele Babini 5 , Ilaria De Stefano 3 , Antonella Sgura 2 , Mariateresa Mancuso 1 , Anna Saran 1 and Simonetta Pazzaglia 1 1 Laboratory of Biomedical Technologies, Agenzia Nazionale per le Nuove Tecnologie, l’Energia e lo Sviluppo Economico Sostenibile (ENEA), CR-Casaccia, Rome, Italy 2 Department of Science, University Roma Tre, Rome, Italy 3 Department of Radiation Physics, Universita degli Studi Guglielmo Marconi, Rome, Italy 4 Technical Unit of Energetic Efficiency, ENEA, Rome, Italy 5 Department of Physics, University of Pavia, Pavia, Italy Correspondence to: Simonetta Pazzaglia, email: // Keywords : cerebellum, expression profiles, medulloblastoma, apoptosis, senescence Received : June 14, 2016 Accepted : June 26, 2016 Published : July 07, 2016 Abstract Mutations in DNA repair pathways are frequent in human cancers. Hence, gaining insights into the interaction of DNA repair genes is key to development of novel tumor-specific treatment strategies. In this study, we tested the functional relationship in development and oncogenesis between the homologous recombination (HR) factor Rad54 and Parp-1 , a nuclear enzyme that plays a multifunctional role in DNA damage signaling and repair. We introduced single or combined Rad54 and Parp-1 inactivating germline mutations in Ptc1 heterozygous mice, a well-characterized model of medulloblastoma, the most common malignant pediatric brain tumor. Our study reveals that combined inactivation of Rad54 and Parp-1 causes a marked growth delay culminating in perinatallethality, providing for the first time evidence of synthetic lethal interactions between Rad54 and Parp-1 in vivo . Although the double mutation hampered investigation of Rad54 and Parp-1 interactions in cerebellum tumorigenesis, insights were gained by showing accumulation of endogenous DNA damage and increased apoptotic rate in granule cell precursors (GCPs). A network-based approach to detect differential expression of DNA repair genes in the cerebellum revealed perturbation of p53 signaling in Rad54 -/- / Parp-1 -/- / Ptc1 +/- , and MEFs from combined Rad54/Parp-1 mutants showed p53/p21-dependent typical senescent features. These findings help elucidate the genetic interplay between Rad54 and Parp-1 by suggesting that p53/p21-mediated apoptosis and/or senescence may be involved in synthetic lethal interactions occurring during development and inhibition of tumor growth.
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- 2017
31. N6-isopentenyladenosine and analogs activate the NRF2-mediated antioxidant response
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Paola Giardullo, Francesca Colombo, Mariateresa Mancuso, Anna Saran, Pierangela Ciuffreda, Alice Dassano, Enzo Santaniello, Tommaso A. Dragani, Loris De Cecco, Saran, A., and Mancuso, M.
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Pathway analysis ,Administration, Topical ,Clinical Biochemistry ,i6A, N6-isopentenyladenosine ,Modified nucleoside ,medicine.disease_cause ,Biochemistry ,Antioxidants ,Anti-inflammatory drug ,Gene expression ,Modified nucleosides ,Reactive oxygen species ,allyl6A ,Isopentenyladenosine ,Mice ,N6-isopentenyladenosine ,Otitis ,lcsh:QH301-705.5 ,lcsh:R5-920 ,Transfection ,N6-allyladenosine ,benzyl6A ,Gene Expression Regulation, Neoplastic ,MCF-7 Cells ,Tetradecanoylphorbol Acetate ,Female ,Signal transduction ,medicine.symptom ,lcsh:Medicine (General) ,N6-benzyladenosine ,butyl6A ,Oxidation-Reduction ,Signal Transduction ,NF-E2-Related Factor 2 ,Pathway analysi ,HL-60 Cells ,Biology ,Article ,benzyl6A, N6-benzyladenosine ,N6-butyladenosine ,i6A ,In vivo ,medicine ,Animals ,Humans ,butyl6A, N6-butyladenosine ,Transcription factor ,Organic Chemistry ,Hydrogen Peroxide ,Molecular biology ,Disease Models, Animal ,lcsh:Biology (General) ,Mechanism of action ,Cell culture ,allyl6A, N6-allyladenosine ,Oxidative stress - Abstract
N6-isopentenyladenosine (i6A), a naturally occurring modified nucleoside, inhibits the proliferation of human tumor cell lines in vitro, but its mechanism of action remains unclear. Treatment of MCF7 human breast adenocarcinoma cells with i6A or with three synthetic analogs (allyl6A, benzyl6A, and butyl6A) inhibited growth and altered gene expression. About 60% of the genes that were differentially expressed in response to i6A treatment were also modulated by the analogs, and pathway enrichment analysis identified the NRF2-mediated oxidative stress response as being significantly modulated by all four compounds. Luciferase reporter gene assays in transfected MCF7 cells confirmed that i6A activates the transcription factor NRF2. Assays for cellular production of reactive oxygen species indicated that i6A and analogs had antioxidant effects, reducing basal levels and inhibiting the H2O2- or 12-O-tetradecanoylphorbol-13-acetate (TPA)-induced production in MCF7 or dHL-60 (HL-60 cells induced to differentiate along the neutrophilic lineage) cell lines, respectively. In vivo, topical application of i6A or benzyl6A to mouse ears prior to TPA stimulation lessened the inflammatory response and significantly reduced the number of infiltrating neutrophils. These results suggest that i6A and analogs trigger a cellular response against oxidative stress and open the possibility of i6A and benzyl6A being used as topical anti-inflammatory drugs., Highlights • i6A and analogs (allyl6A, benzyl6A and butyl6A) inhibit growth of MCF7 cells. • They activate NRF2-mediated oxidative stress response. • They inhibit ROS production in MCF7 or dHL-60 cells treated with H2O2 or TPA. • In vivo topical application of i6A or benzyl6A reduces TPA-induced inflammation. • i6A and benzyl6A have potential as topical antioxidant and anti-inflammatory drugs., Graphical abstract
- Published
- 2014
32. Hyperacetylation of Cardiac Mitochondrial Proteins Is Associated with Metabolic Impairment and Sirtuin Downregulation after Chronic Total Body Irradiation of ApoE -/- Mice
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Michael J. Atkinson, Omid Azimzadeh, Soile Tapio, Stefanie M. Hauck, Zarko Barjaktarovic, Anna Saran, Satoshi Tanaka, Mariateresa Mancuso, Ignacia Braga-Tanaka, Juliane Merl-Pham, Barjaktarovic, Z., Merl-Pham, J., Braga-Tanaka, I., Tanaka, S., Hauck, S. M., Saran, A., Mancuso, M., Atkinson, M. J., Tapio, S., and Azimzadeh, O.
- Subjects
Peroxisome proliferator-activated receptor ,Mitochondrion ,medicine.disease_cause ,Mitochondria, Heart ,lcsh:Chemistry ,Mice ,0302 clinical medicine ,cardiovascular disease ,Medicine ,Myocytes, Cardiac ,lcsh:QH301-705.5 ,Beta oxidation ,Spectroscopy ,Heart metabolism ,chemistry.chemical_classification ,0303 health sciences ,acetylome ,biology ,ionising radiation ,Acetylation ,General Medicine ,Total body irradiation ,Peroxisome Proliferator-Activated Receptor Gamma Coactivator 1-alpha ,ddc ,3. Good health ,Computer Science Applications ,mitochondria ,030220 oncology & carcinogenesis ,Sirtuin ,tbi ,Female ,Whole-Body Irradiation ,medicine.medical_specialty ,Down-Regulation ,chronic exposure ,heart ,Article ,Catalysis ,Mitochondrial Proteins ,Inorganic Chemistry ,03 medical and health sciences ,Apolipoproteins E ,proteomics ,sirtuins ,Internal medicine ,Animals ,Physical and Theoretical Chemistry ,Molecular Biology ,030304 developmental biology ,Acetylome ,Cardiovascular disease ,Chronic exposure ,Heart ,Ionising radiation ,Mitochondria ,PPAR alpha ,Proteomics ,Sirtuins ,TBI ,business.industry ,Organic Chemistry ,Proteomic ,Ionising Radiation ,Chronic Exposure ,Tbi ,Cardiovascular Disease ,Ppar Alpha ,Mice, Inbred C57BL ,Citric acid cycle ,ppar alpha ,Endocrinology ,lcsh:Biology (General) ,lcsh:QD1-999 ,chemistry ,biology.protein ,business ,Protein Processing, Post-Translational ,Oxidative stress - Abstract
Chronic exposure to low-dose ionizing radiation is associated with an increased risk of cardiovascular disease. Alteration in energy metabolism has been suggested to contribute to radiation-induced heart pathology, mitochondrial dysfunction being a hallmark of this disease. The goal of this study was to investigate the regulatory role of acetylation in heart mitochondria in the long-term response to chronic radiation. ApoE-deficient C57Bl/6J mice were exposed to low-dose-rate (20 mGy/day) gamma radiation for 300 days, resulting in a cumulative total body dose of 6.0 Gy. Heart mitochondria were isolated and analyzed using quantitative proteomics. Radiation-induced proteome and acetylome alterations were further validated using immunoblotting, enzyme activity assays, and ELISA. In total, 71 proteins showed peptides with a changed acetylation status following irradiation. The great majority (94%) of the hyperacetylated proteins were involved in the TCA cycle, fatty acid oxidation, oxidative stress response and sirtuin pathway. The elevated acetylation patterns coincided with reduced activity of mitochondrial sirtuins, increased the level of Acetyl-CoA, and were accompanied by inactivation of major cardiac metabolic regulators PGC-1 alpha and PPAR alpha. These observations suggest that the changes in mitochondrial acetylation after irradiation is associated with impairment of heart metabolism. We propose a novel mechanism involved in the development of late cardiac damage following chronic irradiation.
- Published
- 2019
33. Actionable Explainable AI (AxAI): A Practical Example with Aggregation Functions for Adaptive Classification and Textual Explanations for Interpretable Machine Learning
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Anna Saranti, Miroslav Hudec, Erika Mináriková, Zdenko Takáč, Udo Großschedl, Christoph Koch, Bastian Pfeifer, Alessa Angerschmid, and Andreas Holzinger
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actionable explainable AI ,classification ,aggregation functions ,ordinal sums ,continuous XOR-problem ,interpretable machine learning ,Computer engineering. Computer hardware ,TK7885-7895 - Abstract
In many domains of our daily life (e.g., agriculture, forestry, health, etc.), both laymen and experts need to classify entities into two binary classes (yes/no, good/bad, sufficient/insufficient, benign/malign, etc.). For many entities, this decision is difficult and we need another class called “maybe”, which contains a corresponding quantifiable tendency toward one of these two opposites. Human domain experts are often able to mark any entity, place it in a different class and adjust the position of the slope in the class. Moreover, they can often explain the classification space linguistically—depending on their individual domain experience and previous knowledge. We consider this human-in-the-loop extremely important and call our approach actionable explainable AI. Consequently, the parameters of the functions are adapted to these requirements and the solution is explained to the domain experts accordingly. Specifically, this paper contains three novelties going beyond the state-of-the-art: (1) A novel method for detecting the appropriate parameter range for the averaging function to treat the slope in the “maybe” class, along with a proposal for a better generalisation than the existing solution. (2) the insight that for a given problem, the family of t-norms and t-conorms covering the whole range of nilpotency is suitable because we need a clear “no” or “yes” not only for the borderline cases. Consequently, we adopted the Schweizer–Sklar family of t-norms or t-conorms in ordinal sums. (3) A new fuzzy quasi-dissimilarity function for classification into three classes: Main difference, irrelevant difference and partial difference. We conducted all of our experiments with real-world datasets.
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- 2022
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34. Multi-omics disease module detection with an explainable Greedy Decision Forest
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Bastian Pfeifer, Hubert Baniecki, Anna Saranti, Przemyslaw Biecek, and Andreas Holzinger
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Medicine ,Science - Abstract
Abstract Machine learning methods can detect complex relationships between variables, but usually do not exploit domain knowledge. This is a limitation because in many scientific disciplines, such as systems biology, domain knowledge is available in the form of graphs or networks, and its use can improve model performance. We need network-based algorithms that are versatile and applicable in many research areas. In this work, we demonstrate subnetwork detection based on multi-modal node features using a novel Greedy Decision Forest (GDF) with inherent interpretability. The latter will be a crucial factor to retain experts and gain their trust in such algorithms. To demonstrate a concrete application example, we focus on bioinformatics, systems biology and particularly biomedicine, but the presented methodology is applicable in many other domains as well. Systems biology is a good example of a field in which statistical data-driven machine learning enables the analysis of large amounts of multi-modal biomedical data. This is important to reach the future goal of precision medicine, where the complexity of patients is modeled on a system level to best tailor medical decisions, health practices and therapies to the individual patient. Our proposed explainable approach can help to uncover disease-causing network modules from multi-omics data to better understand complex diseases such as cancer.
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- 2022
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35. Developmental and oncogenic radiation effects on neural stem cells and their differentiating progeny in mouse cerebellum
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Simona Leonardi, Ilaria De Stefano, Mirella Tanori, Anna Saran, Paola Giardullo, Emanuela Pasquali, Simonetta Pazzaglia, Arianna Casciati, Mariateresa Mancuso, Pazzaglia, S., Saran, A., Mancuso, M., Giardullo, P., Casciati, A., Leonardi, S., and Tanori, M.
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P21 ,DNA Repair ,Apoptosis ,Carcinogenesis ,DNA repair ,Medulloblastoma ,Neural stem cells ,Progenitor cells ,Ptc1+/- mice ,DNA damage ,Biology ,medicine.disease_cause ,Mice ,03 medical and health sciences ,0302 clinical medicine ,Neural Stem Cells ,Cerebellum ,medicine ,Animals ,Progenitor cell ,Carcinogenesi ,030304 developmental biology ,Mice, Knockout ,0303 health sciences ,Stem Cells ,Neurogenesis ,Apoptosi ,Cell Differentiation ,Cell Biology ,Embryonic stem cell ,Neural stem cell ,3. Good health ,Cell biology ,Mice, Inbred C57BL ,nervous system ,030220 oncology & carcinogenesis ,Immunology ,Molecular Medicine ,Stem cell ,DNA Damage ,Developmental Biology - Abstract
Neural stem cells are highly susceptible to radiogenic DNA damage, however, little is known about their mechanisms of DNA damage response (DDR) and the long-term consequences of genotoxic exposure. Patched1 heterozygous mice (Ptc1+/−) provide a powerful model of medulloblastoma (MB), a frequent pediatric tumor of the cerebellum. Irradiation of newborn Ptc1+/− mice dramatically increases the frequency and shortens the latency of MB. In this model, we investigated the mechanisms through which multipotent neural progenitors (NSCs) and fate-restricted progenitor cells (PCs) of the cerebellum respond to DNA damage induced by radiation, and the long-term developmental and oncogenic consequences. These responses were assessed in mice exposed to low (0.25 Gy) or high (3 Gy) radiation doses at embryonic day 13.5 (E13.5), when NSCs giving rise to the cerebellum are specified but the external granule layer (EGL) has not yet formed, or at E16.5, during the expansion of granule PCs to form the EGL. We found crucial differences in DDR and apoptosis between NSCs and fate-restricted PCs, including lack of p21 expression in NSCs. NSCs also appear to be resistant to oncogenesis from low-dose radiation exposure but more vulnerable at higher doses. In addition, the pathway to DNA repair and the pattern of oncogenic alterations were strongly dependent on age at exposure, highlighting a differentiation-stage specificity of DNA repair pathways in NSCs and PCs. These findings shed light on the mechanisms used by NSCs and PCs to maintain genome integrity during neurogenesis and may have important implications for radiation risk assessment and for development of targeted therapies against brain tumors.
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- 2013
36. Oncogenic Radiation Abscopal Effects In Vivo: Interrogating Mouse Skin
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Ilaria De Stefano, Mariateresa Mancuso, Emanuela Pasquali, Arianna Casciati, Paola Giardullo, Simona Leonardi, Anna Saran, Mirella Tanori, Simonetta Pazzaglia, and Christian C. Naus
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Patched Receptors ,Cancer Research ,Pathology ,medicine.medical_specialty ,Neoplasms, Radiation-Induced ,Skin Neoplasms ,DNA damage ,Apoptosis ,Receptors, Cell Surface ,medicine.disease_cause ,Radiation Tolerance ,Mice ,Radiation Protection ,In vivo ,Carcinoma ,Animals ,Medicine ,Radiology, Nuclear Medicine and imaging ,Receptor ,Crosses, Genetic ,Skin ,Radiation ,business.industry ,Gap Junctions ,medicine.disease ,Patched-1 Receptor ,Oncology ,PTCH1 ,Carcinoma, Basal Cell ,Connexin 43 ,Gene Knockdown Techniques ,Cancer research ,business ,Carcinogenesis ,Intracellular ,DNA Damage - Abstract
Purpose To investigate the tissue dependence in transmission of abscopal radiation signals and their oncogenic consequences in a radiosensitive mouse model and to explore the involvement of gap junction intercellular communication (GJIC) in mediating radiation tumorigenesis in off-target mouse skin. Methods and Materials Patched1 heterozygous (Ptch1 +/− ) mice were irradiated at postnatal day 2 (P2) with 10 Gy of x-rays. Individual lead cylinders were used to protect the anterior two-thirds of the body, whereas the hindmost part was directly exposed to radiation. To test the role of GJICs and their major constituent connexin43 (Cx43), crosses between Ptch1 +/− and Cx43 +/− mice were similarly irradiated. These mouse groups were monitored for their lifetime, and skin basal cell carcinomas (BCCs) were counted and recorded. Early responses to DNA damage - Double Strand Breaks (DSBs) and apoptosis - were also evaluated in shielded and directly irradiated skin areas. Results We report abscopal tumor induction in the shielded skin of Ptch1 +/− mice after partial-body irradiation. Endpoints were induction of early nodular BCC-like tumors and macroscopic infiltrative BCCs. Abscopal tumorigenesis was significantly modulated by Cx43 status, namely, Cx43 reduction was associated with decreased levels of DNA damage and oncogenesis in out-of-field skin, suggesting a key role of GJIC in transmission of oncogenic radiation signals to unhit skin. Conclusions Our results further characterize the nature of abscopal responses and the implications they have on pathologic processes in different tissues, including their possible underlying mechanistic bases.
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- 2013
37. Dose and Spatial Effects in Long-Distance Radiation Signaling In Vivo: Implications for Abscopal Tumorigenesis
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Arianna Casciati, Mirella Tanori, Anna Saran, Mariateresa Mancuso, Emanuela Pasquali, Ilaria De Stefano, Simona Leonardi, Paola Giardullo, Simonetta Pazzaglia, Saran, A., Pazzaglia, S., Tanori, M., Casciati, A., Leonardi, S, and Mancuso, M.
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Patched Receptors ,Cancer Research ,Programmed cell death ,Pathology ,medicine.medical_specialty ,Neoplasms, Radiation-Induced ,Time Factors ,Central nervous system ,Receptors, Cell Surface ,medicine.disease_cause ,Radiation Tolerance ,Ionizing radiation ,Mice ,Radiation Protection ,In vivo ,Cerebellum ,medicine ,Animals ,Radiology, Nuclear Medicine and imaging ,Irradiation ,Cerebellar Neoplasms ,Germ-Line Mutation ,Radiation ,Cell Death ,business.industry ,Dose-Response Relationship, Radiation ,Bystander Effect ,Patched-1 Receptor ,Dose–response relationship ,medicine.anatomical_structure ,Oncology ,Apoptosis ,Cancer research ,Carcinogenesis ,business ,Whole-Body Irradiation - Abstract
Purpose: To investigate the dose and spatial dependence of abscopal radiation effects occurring in vivo in the mouse, along with their tumorigenic potential in the central nervous system (CNS) of a radiosensitive mouse model. Methods and Materials: Patched1 (Ptch1)+/- mice, carrying a germ-line heterozygous inactivating mutation in the Ptch1 gene and uniquely susceptible to radiation damage in neonatal cerebellum, were exposed directly to ionizing radiation (1, 2, or 3 Gy of x-rays) or treated in a variety of partial-body irradiation protocols, in which the animals' head was fully protected by suitable lead cylinders while the rest of the body was exposed to x-rays in full or in part. Apoptotic cell death was measured in directly irradiated and shielded cerebellum shortly after irradiation, and tumor development was monitored in lifetime groups. The same endpoints were measured using different shielding geometries in mice irradiated with 3 or 10 Gy of x-rays. Results: Although dose-dependent cell death was observed in off-target cerebellum for all doses and shielding conditions tested, a conspicuous lack of abscopal response for CNS tumorigenesis was evident at the lowest dose of 1 Gy. By changing the amount of exposed body volume, the shielding geometry could also significantly modulate tumorigenesis depending on dose. Conclusions: We conclude that interplay between radiation dose and exposed tissue volume plays a critical role in nontargeted effects occurring in mouse CNS under conditions relevant to humans. These findings may help understanding the mechanisms of long-range radiation signaling in harmful effects, including carcinogenesis, occurring in off-target tissues. © 2013 Elsevier Inc. All rights reserved.
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- 2013
38. The FeatureCloud Platform for Federated Learning in Biomedicine: Unified Approach
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Julian Matschinske, Julian Späth, Mohammad Bakhtiari, Niklas Probul, Mohammad Mahdi Kazemi Majdabadi, Reza Nasirigerdeh, Reihaneh Torkzadehmahani, Anne Hartebrodt, Balazs-Attila Orban, Sándor-József Fejér, Olga Zolotareva, Supratim Das, Linda Baumbach, Josch K Pauling, Olivera Tomašević, Béla Bihari, Marcus Bloice, Nina C Donner, Walid Fdhila, Tobias Frisch, Anne-Christin Hauschild, Dominik Heider, Andreas Holzinger, Walter Hötzendorfer, Jan Hospes, Tim Kacprowski, Markus Kastelitz, Markus List, Rudolf Mayer, Mónika Moga, Heimo Müller, Anastasia Pustozerova, Richard Röttger, Christina C Saak, Anna Saranti, Harald H H W Schmidt, Christof Tschohl, Nina K Wenke, and Jan Baumbach
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Computer applications to medicine. Medical informatics ,R858-859.7 ,Public aspects of medicine ,RA1-1270 - Abstract
BackgroundMachine learning and artificial intelligence have shown promising results in many areas and are driven by the increasing amount of available data. However, these data are often distributed across different institutions and cannot be easily shared owing to strict privacy regulations. Federated learning (FL) allows the training of distributed machine learning models without sharing sensitive data. In addition, the implementation is time-consuming and requires advanced programming skills and complex technical infrastructures. ObjectiveVarious tools and frameworks have been developed to simplify the development of FL algorithms and provide the necessary technical infrastructure. Although there are many high-quality frameworks, most focus only on a single application case or method. To our knowledge, there are no generic frameworks, meaning that the existing solutions are restricted to a particular type of algorithm or application field. Furthermore, most of these frameworks provide an application programming interface that needs programming knowledge. There is no collection of ready-to-use FL algorithms that are extendable and allow users (eg, researchers) without programming knowledge to apply FL. A central FL platform for both FL algorithm developers and users does not exist. This study aimed to address this gap and make FL available to everyone by developing FeatureCloud, an all-in-one platform for FL in biomedicine and beyond. MethodsThe FeatureCloud platform consists of 3 main components: a global frontend, a global backend, and a local controller. Our platform uses a Docker to separate the local acting components of the platform from the sensitive data systems. We evaluated our platform using 4 different algorithms on 5 data sets for both accuracy and runtime. ResultsFeatureCloud removes the complexity of distributed systems for developers and end users by providing a comprehensive platform for executing multi-institutional FL analyses and implementing FL algorithms. Through its integrated artificial intelligence store, federated algorithms can easily be published and reused by the community. To secure sensitive raw data, FeatureCloud supports privacy-enhancing technologies to secure the shared local models and assures high standards in data privacy to comply with the strict General Data Protection Regulation. Our evaluation shows that applications developed in FeatureCloud can produce highly similar results compared with centralized approaches and scale well for an increasing number of participating sites. ConclusionsFeatureCloud provides a ready-to-use platform that integrates the development and execution of FL algorithms while reducing the complexity to a minimum and removing the hurdles of federated infrastructure. Thus, we believe that it has the potential to greatly increase the accessibility of privacy-preserving and distributed data analyses in biomedicine and beyond.
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- 2023
- Full Text
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39. Nonlinear Radiation-Induced Cataract Using the Radiosensitive Ptch1(+/-) Mouse Model
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Paola Giardullo, Anna Saran, Simona Leonardi, Gabriele Babini, Emanuela Pasquali, Barbara Tanno, Mariateresa Mancuso, Ilaria De Stefano, Mancuso, M., Saran, A., Pasquali, E., Leonardi, S., Tanno, B., De Stefano, Ilaria, Giardullo, Paola, Tanno, Barbara, Leonardi, Simona, Pasquali, Emanuela, Babini, Gabriele, Saran, Anna, and Mancuso, Mariateresa
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0301 basic medicine ,Radiology, Nuclear Medicine and Imaging ,medicine.medical_specialty ,Pathology ,Biophysics ,Nonlinear radiation ,Radiation Tolerance ,Nonlinear Dynamic ,Cataract ,03 medical and health sciences ,Mice ,0302 clinical medicine ,Induced Cataract ,Cataracts ,Lens, Crystalline ,medicine ,Animals ,Radiology, Nuclear Medicine and imaging ,Irradiation ,Radiation Injurie ,Radiation Injuries ,Alleles ,Allele ,Radiation ,Animal ,business.industry ,Cancer ,Dose-Response Relationship, Radiation ,medicine.disease ,Surgery ,Patched-1 Receptor ,Dose–response relationship ,Disease Models, Animal ,030104 developmental biology ,medicine.anatomical_structure ,Biophysic ,PTCH1 ,Nonlinear Dynamics ,030220 oncology & carcinogenesis ,Lens (anatomy) ,business - Abstract
While most of the evidence for radiation-induced late health effects relates to cancer, there has been increasing interest recently in the development of non-cancer diseases, including lens opacity, observed in populations exposed to low-dose radiation. In a recent study, we reported that mice heterozygous for the Patched1 (Ptch1) gene represented a novel and powerful animal model for this disorder, and a useful tool for investigating the mechanisms of radiogenic cataract development. Given the ongoing and considerable uncertainty in allowable lens dose levels and the existence of a threshold for the development of cataracts, we tested the effects of a decreasing range of radiation doses (2 Gy, 1 Gy and 0.5 Gy X rays) by irradiating groups of Ptch1+/- mice at 2 days of age. Our findings showed that at this dose range, acute exposure of this highly susceptible mouse model did not induce macroscopically detectable cataracts, and only the 2 Gy irradiated mice showed microscopic alterations of the lens. Molecular analyses performed to evaluate the induction of epithelial-mesenchymal transition (EMT) and subsequent fibrotic alterations in mouse lens cells also indicated the existence of a dose threshold for such effects in the mouse model used. The mechanisms of cataractogenesis remain unclear, and further experimental studies are essential to elucidate those mechanisms specific for cataract initiation and development after irradiation, as well as the underlying genetic factors controlling cataract susceptibility. © 2016 by Radiation Research Society.
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- 2016
40. Age-related effects of X-ray irradiation on mouse hippocampus
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Montserrat Bellés, Arianna Casciati, Katalin Dobos, Francesca Antonelli, Anett Benedek, Stefan J. Kempf, Andrea Balogh, Mirella Tanori, Luis Heredia, Michael J. Atkinson, Christine von Toerne, Omid Azimzadeh, Anna Saran, Geza Sáfrány, Mohammed A. Benotmane, M. Victoria Linares-Vidal, Soile Tapio, Katalin Lumniczky, Simonetta Pazzaglia, Laboratori de Toxicologia i Salut Mediambiental, Psicologia, Ciències Mèdiques Bàsiques, and Universitat Rovira i Virgili
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mitochondria ,Biochemistry and technology ,Bioquímica y tecnología ,1949-2553 ,proteomics ,Hipocamp ,Proteòmica ,Bioquímica i biotecnologia ,Mitocondris ,cognitive effects - Abstract
DOI: 10.18632/oncotarget.8575URL: http://www.impactjournals.com/oncotarget/index.php?journal=oncotarget&page=article&op=view&path%5b%5d=8575 Therapeutic irradiation of pediatric and adult patients can profoundly affect adult neurogenesis, and cognitive impairment manifests as a deficit in hippocampal-dependent functions. Age plays a major role in susceptibility to radiation, and younger children are at higher risk of cognitive decay when compared to adults. Cranial irradiation affects hippocampal neurogenesis by induction of DNA damage in neural progenitors, through the disruption of the neurogenic microenvironment, and defective integration of newborn neurons into the neuronal network. Our goal here was to assess cellular and molecular alterations induced by cranial X-ray exposure to low/moderate doses (0.1 and 2 Gy) in the hippocampus of mice irradiated at the postnatal ages of day 10 or week 10, as well as the dependency of these phenomena on age at irradiation. To this aim, changes in the cellular composition of the dentate gyrus, mitochondrial functionality, proteomic profile in the hippocampus, as well as cognitive performance were evaluated by a multidisciplinary approach. Our results suggest the induction of specific alterations in hippocampal neurogenesis, microvascular density and mitochondrial functions, depending on age at irradiation. A better understanding of how irradiation impairs hippocampal neurogenesis at low and moderate doses is crucial to minimize adverse effects of therapeutic irradiation, contributing also to radiation safety regulations.
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- 2016
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41. The Radiation Bystander Effect and its Potential Implications for Human Health
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Simona Leonardi, Anna Saran, Emanuela Pasquali, Mirella Tanori, V. Di Majo, Mariateresa Mancuso, Paola Giardullo, Simonetta Pazzaglia, Mancuso, M, Pasquali, E, Giardullo, P, Leonardi, S, Tanori, M, Di Majo, V, Pazzaglia, S, and Saran, A.
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Radiobiology ,Cancer ,Bystander Effect ,Cell Communication ,General Medicine ,Biology ,medicine.disease ,Biochemistry ,In vitro ,Ionizing radiation ,Mediator ,In vivo ,Neoplasms ,Radiation, Ionizing ,Immunology ,Bystander effect ,Cancer research ,medicine ,Animals ,Humans ,Molecular Medicine ,Irradiation ,Molecular Biology ,DNA Damage - Abstract
A long-held dogma in radiation biology has been that the biological effects of exposure to ionizing radiation occur as a result of damage in directly irradiated cells and that no effect would occur in neighboring unirradiated cells. This paradigm has been frequently challenged by reports of radiation effects in unirradiated or 'bystander' cells receiving signals from directly irradiated cells, an issue that may have substantial impact on radiation risk assessment and development of radiation-based therapies. Radiation-induced bystander effects have been shown in single-cell systems in vitro for an array of cancer relevant endpoints, and may trigger damage in more complex 3-D tissue systems. They may be mediated by soluble factors released by irradiated cells into the extracellular environment and/or by the passage of mediator molecules through gap-junction intercellular communication. To date, evidence that radiation-associated bystander or abscopal responses are effectual in vivo has been limited, but new data suggest that they may significantly affect tumor development in susceptible mouse models. Further understanding of how the signal/s is transmitted to unirradiated cells and tissues and how it provokes long-range and significant responses is crucial. By summarizing the existing evidence of radiation induced bystander-like effects in various systems with emphasis on in vivo findings, we will discuss the potential mechanisms involved in these observations and how effects in bystander cells contribute to uncertainties in assessing cancer risks associated with radiation exposure.
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- 2012
42. Concise Review: Stem Cell Effects in Radiation Risk
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Kevin M. Prise and Anna Saran
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0303 health sciences ,Induced stem cells ,Stem cell theory of aging ,Clinical uses of mesenchymal stem cells ,Cell Biology ,Anatomy ,Biology ,Hematopoietic Stem Cells ,Radiation Tolerance ,3. Good health ,Cell biology ,Endothelial stem cell ,03 medical and health sciences ,0302 clinical medicine ,Cell killing ,Risk Factors ,Cancer stem cell ,030220 oncology & carcinogenesis ,Animals ,Humans ,Molecular Medicine ,Stem cell ,030304 developmental biology ,Developmental Biology ,Adult stem cell - Abstract
Stem cells of normal mammalian tissues are defined as nonspecialized cells that have two critical properties: (a) the ability to renew themselves through cell division and (b) the potency to differentiate into other cell types. Therefore, they play a crucial role in development and in tissue homeostasis during adult life. Being long-lived, they can be the targets of environmental carcinogens leading to the accumulation of consecutive genetic changes. Hence, the genome of stem cells must be exceptionally well protected, and several protective mechanisms have evolved to ensure the genetic integrity of the stem cell compartment in any given tissue. Ionizing radiation exposure can disrupt tissue homeostasis both through the induction of cell killing/depletion of radiosensitive stem cells, leading to loss of tissue functionality and by genotoxic damage, increasing overall risk of cancer. We will review the current knowledge about radiation effects in adult stem cells of specific normal tissues, including skin, breast, and brain, examine parallels, as well as differences with cancer stem cells, and discuss the relevance of stem cell effects to radiation risk and radiotherapy.
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- 2011
43. Basal cell carcinoma and the carcinogenic role of aberrant Hedgehog signaling
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Anna Saran
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Keratinocytes ,Patched Receptors ,Patched ,Cancer Research ,Pathology ,medicine.medical_specialty ,Skin Neoplasms ,DNA Repair ,Basal Cell Nevus Syndrome ,Mice, Transgenic ,Receptors, Cell Surface ,Biology ,Receptors, G-Protein-Coupled ,Mice ,medicine ,Animals ,Humans ,Hedgehog Proteins ,Basal cell carcinoma ,Cilia ,Sonic hedgehog ,skin and connective tissue diseases ,Hedgehog ,Skin ,Mammals ,Mice, Knockout ,integumentary system ,PTEN Phosphohydrolase ,Wnt signaling pathway ,Cancer ,Forkhead Transcription Factors ,General Medicine ,medicine.disease ,Smoothened Receptor ,Hedgehog signaling pathway ,Neoplasm Proteins ,Repressor Proteins ,Wnt Proteins ,Cell Transformation, Neoplastic ,Oncology ,Carcinoma, Basal Cell ,biology.protein ,Hair Follicle ,Signal Transduction - Abstract
Basal cell carcinoma (BCC) is the most frequent cancer in the white population and its incidence appears to be increasing worldwide. While the majority of BCCs arise sporadically, many cases are attributable to basal cell nevus syndrome, or Gorlin syndrome, an autosomal dominantly inherited disorder characterized by the occurrence of multiple BCCs and by extracutaneous tumors. Genetic studies on patients with basal cell nevus syndrome indicate deregulation of the Hedgehog (Hh) pathway in epidermal keratinocytes as the primary event in the pathogenesis of BCC. This article summarizes the recent progress in understanding Hh-dependent BCC tumorigenesis, as well as evidence for deregulation of other molecular pathways, primarily the Wnt developmental pathway. Understanding the molecular genetics of BCC development has provided new opportunities for molecular therapy of this cancer by targeting Hh and other signaling pathways.
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- 2010
44. Physical, Heritable and Age-Related Factors as Modifiers of Radiation Cancer Risk in Patched Heterozygous Mice
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Simona Leonardi, Mirella Tanori, Vincenzo Di Majo, Mariateresa Mancuso, Anna Saran, S. Rebessi, Emanuela Pasquali, and Simonetta Pazzaglia
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Patched Receptors ,Patched ,Heterozygote ,Cancer Research ,Pathology ,medicine.medical_specialty ,Cerebellum ,Neoplasms, Radiation-Induced ,Loss of Heterozygosity ,Apoptosis ,Receptors, Cell Surface ,Ionizing radiation ,Mice ,Animals ,Medicine ,Radiology, Nuclear Medicine and imaging ,Cerebellar Neoplasms ,Gene ,Mice, Knockout ,Medulloblastoma ,Radiation ,business.industry ,Stem Cells ,Age Factors ,Cancer ,Dose-Response Relationship, Radiation ,medicine.disease ,Mice, Inbred C57BL ,Patched-1 Receptor ,medicine.anatomical_structure ,Animals, Newborn ,Oncology ,Models, Animal ,Knockout mouse ,Cancer research ,business ,Precancerous Conditions ,Whole-Body Irradiation - Abstract
Purpose To address the tumorigenic potential of exposure to low/intermediate doses of ionizing radiation and to identify biological factors influencing tumor response in a mouse model highly susceptible to radiogenic cancer. Methods and Materials Newborn Ptc1 heterozygous mice were exposed to X-ray doses of 100, 250, and 500 mGy, and tumor development was monitored for their lifetime. Additional groups were irradiated with the same doses and sacrificed at fixed times for determination of short-term endpoints, such as apoptosis and early preneoplastic lesions in cerebellum. Finally, groups of Ptc1 heterozygous mice were bred on the C57BL/6 background to study the influence of common variant genes on radiation response. Results We have identified a significant effect of low-intermediate doses of radiation (250 and 500 mGy) in shortening mean survival and inducing early and more progressed stages of tumor development in the cerebellum of Ptc1 +/– mice. In addition, we show that age at exposure and heritable factors are potent modifiers of radiation-related cancer risk. Conclusions The Ptc1 knockout mouse model offers a highly sensitive system that may potentially help to improve understanding and quantification of risk at low doses, such as doses experienced in occupational and medical exposures, and clarify the complex interactions between genetic and environmental factors underlying cancer susceptibility.
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- 2009
45. Modulation of basal and squamous cell carcinoma by endogenous estrogen in mouse models of skin cancer
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S. Rebessi, Vincenzo Covelli, Mirella Tanori, Giovanni Scambia, Anna Saran, Mariateresa Mancuso, Maria Pierdomenico, L. De Stefano, Simona Leonardi, Emanuela Pasquali, Simonetta Pazzaglia, Daniela Gallo, and V. Di Majo
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Male ,Patched Receptors ,Cancer Research ,medicine.medical_specialty ,Neoplasms, Radiation-Induced ,Skin Neoplasms ,Ultraviolet Rays ,medicine.drug_class ,Ovariectomy ,Estrogen receptor ,Receptors, Cell Surface ,Biology ,medicine.disease_cause ,Mice ,Cyclin D1 ,Internal medicine ,medicine ,Animals ,Estrogen Receptor beta ,Basal cell carcinoma ,neoplasms ,Papilloma ,integumentary system ,Estrogen Receptor alpha ,Estrogens ,General Medicine ,medicine.disease ,Patched-1 Receptor ,Disease Models, Animal ,Cell Transformation, Neoplastic ,Endocrinology ,medicine.anatomical_structure ,Carcinoma, Basal Cell ,Estrogen ,Tumor progression ,Carcinoma, Squamous Cell ,Female ,Skin cancer ,Carcinogenesis ,Keratinocyte - Abstract
Patched1 heterozygous mice (Ptch1(+/-)) are useful for basal cell carcinoma (BCC) studies, being remarkably susceptible to BCC induction by ultraviolet or ionizing radiation. Analogously, skin carcinogenesis-susceptible (Car-S) mice are elective for studies of papilloma and squamous cell carcinoma (SCC) induction. We previously reported a striking effect of gender on BCC induction in Ptch1(+/-) mice, with total resistance of females; likewise, Car-S females show increased skin tumor resistance relative to males. Here, we investigated the protective role of endogenous estrogen in skin keratinocyte tumorigenesis. Control (CN) and ovariectomized Ptch1(+/-) or Car-S females were irradiated for BCC induction or topically treated with chemical carcinogens for SCC induction. Susceptibility to BCC or SCC was dramatically increased in ovariectomized Ptch1(+/-) and Car-S females and restored to levels observed in males. Remarkably, progression of initially benign papillomas to malignant SCC occurred only in ovariectomized Car-S females. We explored the mechanisms underlying tumor progression and report overexpression of estrogen receptor (ER)-alpha, downregulation of ERbeta and upregulation of cyclin D1 in papillomas from ovariectomized Car-S relative to papillomas from CN females. Thus, an imbalanced ERalpha/ERbeta expression may be associated with estrogen-mediated modulation of non-melanoma skin carcinogenesis, with a key role played by cyclin D1. Our findings underscore a highly protective role of endogenous estrogen against skin tumorigenesis by diverse agents in two independent mouse models of skin cancer.
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- 2008
46. Oncogenic bystander radiation effects in Patched heterozygous mouse cerebellum
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Anna Saran, Simona Leonardi, M P Toni, Emanuela Pasquali, Simonetta Pazzaglia, Vincenzo Di Majo, Maria Pimpinella, Mariateresa Mancuso, S. Rebessi, Vincenzo Covelli, and Mirella Tanori
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Patched Receptors ,Patched ,Heterozygote ,Cell signaling ,DNA damage ,Receptors, Cell Surface ,Cell Communication ,Biology ,Mice ,In vivo ,Cerebellum ,Neoplasms ,Radiation, Ionizing ,Bystander effect ,Animals ,Genes, Tumor Suppressor ,Epigenetics ,Multidisciplinary ,Gap Junctions ,Bystander Effect ,Biological Sciences ,Patched-1 Receptor ,Animals, Newborn ,PTCH1 ,Immunology ,Cancer research ,DNA Damage - Abstract
The central dogma of radiation biology, that biological effects of ionizing radiation are a direct consequence of DNA damage occurring in irradiated cells, has been challenged by observations that genetic/epigenetic changes occur in unexposed “bystander cells” neighboring directly-hit cells, due to cell-to-cell communication or soluble factors released by irradiated cells. To date, the vast majority of these effects are described in cell-culture systems, while in vivo validation and assessment of biological consequences within an organism remain uncertain. Here, we describe the neonatal mouse cerebellum as an accurate in vivo model to detect, quantify, and mechanistically dissect radiation-bystander responses. DNA double-strand breaks and apoptotic cell death were induced in bystander cerebellum in vivo . Accompanying these genetic events, we report bystander-related tumor induction in cerebellum of radiosensitive Patched-1 ( Ptch1 ) heterozygous mice after x-ray exposure of the remainder of the body. We further show that genetic damage is a critical component of in vivo oncogenic bystander responses, and provide evidence supporting the role of gap-junctional intercellular communication (GJIC) in transmission of bystander signals in the central nervous system (CNS). These results represent the first proof-of-principle that bystander effects are factual in vivo events with carcinogenic potential, and implicate the need for re-evaluation of approaches currently used to estimate radiation-associated health risks.
- Published
- 2008
47. Inhibition of medulloblastoma tumorigenesis by the antiproliferative and pro‐differentiative gene PC3
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Felice Tirone, Maria Teresa Ciotti, Anna Saran, Mirella Tanori, Laura Micheli, Alberto Gulino, Stefano Farioli-Vecchioli, Simonetta Pazzaglia, Mariateresa Mancuso, Elisabetta Ferretti, and Luca Leonardi
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endocrine system diseases ,Cyclin D ,urologic and male genital diseases ,PC12 Cells ,Biochemistry ,Histones ,Mice ,Genes, Tumor Suppressor ,RNA, Neoplasm ,Promoter Regions, Genetic ,Neurons ,Acetylation ,Basal Cell Nevus Syndrome ,Cell Differentiation ,Hedgehog signaling pathway ,Patched-1 Receptor ,Cell Transformation, Neoplastic ,CXCL3 ,Cell Division ,Biotechnology ,Patched Receptors ,Chromatin Immunoprecipitation ,Heterozygote ,Tumor suppressor gene ,Recombinant Fusion Proteins ,Mice, Transgenic ,Receptors, Cell Surface ,Choristoma ,Biology ,Histone Deacetylases ,Immediate-Early Proteins ,Cerebellar Cortex ,Cyclin D1 ,Neoplastic Syndromes, Hereditary ,Cyclins ,Genetics ,medicine ,Animals ,Humans ,Hedgehog Proteins ,Neoplastic transformation ,Cerebellar Neoplasms ,neoplasms ,Molecular Biology ,Medulloblastoma ,BTG2 ,Tumor Suppressor Proteins ,medicine.disease ,Rats ,Cancer research ,biology.protein ,GRANULE CELL-DIFFERENTIATION ,DEVELOPING MOUSE CEREBELLUM ,CENTRAL-NERVOUS-SYSTEM ,SONIC HEDGEHOG ,HUMAN HOMOLOG ,NEURONAL PRECURSORS ,HETEROZYGOUS MICE ,MAMMALIAN-CELLS ,GROWTH-FACTOR ,N-MYC ,Precancerous Conditions ,Protein Processing, Post-Translational - Abstract
Medulloblastoma, the most common brain tumor in childhood, appears to originate from cerebellar granule cell precursors (GCPs), located in the external granular layer (EGL) of the cerebellum. The antiproliferative gene PC3 (Tis21/BTG2) promotes cerebellar neurogenesis by inducing GCPs to shift from proliferation to differentiation. To assess whether PC3 can prevent the neoplastic transformation of GCPs and medulloblastoma development, we crossed transgenic mice conditionally expressing PC3 (TgPC3) in GCPs with Patched1 heterozygous mice (Ptc(+/-)), a model of medulloblastoma pathogenesis characterized by hyperactivation of the Sonic Hedgehog pathway. Perinatal up-regulation of PC3 in Ptc(+/-)/TgPC3 mice results in a decrease of medulloblastoma incidence of approximately 40% and in a marked reduction of preneoplastic abnormalities, such as hyperplastic EGL areas and lesions. Moreover, overexpression of cyclin D1, hyperproliferation, and defective differentiation--observed in Ptc(+/-) GCPs--are restored to normality in Ptc(+/-)/TgPC3 mice. The PC3-mediated inhibition of cyclin D1 expression correlates with recruitment of PC3 to the cyclin D1 promoter, which is accompanied by histone deacetylation. Remarkably, down-regulation of PC3 is observed in preneoplastic lesions, as well as in human and murine medulloblastomas. As a whole, this indicates that PC3 may prevent medulloblastoma development by controlling cell cycle and promoting differentiation of GCPs.
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- 2007
48. MK-4101, a Potent Inhibitor of the Hedgehog Pathway, Is Highly Active against Medulloblastoma and Basal Cell Carcinoma
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Mariateresa Mancuso, Emanuela Pasquali, Romina Alfonsi, Fabrizio Colaceci, Anna Saran, Gessica Filocamo, Armin Lahm, Simonetta Pazzaglia, Mirko Brunetti, Christian Steinkühler, Mirella Tanori, Lucia Di Marcotullio, Romina Sasso, Pazzaglia, S., Saran, A., Mancuso, M., Pasquali, E., and Tanori, M.
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0301 basic medicine ,Cancer Research ,Cell Survival ,small molecule ,Antineoplastic Agents ,medicine.disease_cause ,Hedgehog pathway ,03 medical and health sciences ,Mice ,Random Allocation ,GLI1 ,medicine ,Animals ,Humans ,Hedgehog Proteins ,Cerebellar Neoplasms ,Hedgehog ,Cell Proliferation ,Medulloblastoma ,biology ,Cell Cycle ,Wnt signaling pathway ,Isoxazoles ,Cell cycle ,Triazoles ,medicine.disease ,Xenograft Model Antitumor Assays ,Hedgehog signaling pathway ,030104 developmental biology ,Oncology ,PTCH1 ,Carcinoma, Basal Cell ,Immunology ,biology.protein ,Cancer research ,Hedgehog pathway, medulloblastoma, small molecule, hedgehog inhibitor ,hedgehog inhibitor ,Carcinogenesis ,Neoplasm Transplantation ,Signal Transduction - Abstract
Aberrant activation of the Hedgehog (Hh) signaling pathway is implicated in the pathogenesis of many cancers, including medulloblastoma and basal cell carcinoma (BCC). In this study, using neonatally irradiated Ptch1+/− mice as a model of Hh-dependent tumors, we investigated the in vivo effects of MK-4101, a novel SMO antagonist, for the treatment of medulloblastoma and BCC. Results clearly demonstrated a robust antitumor activity of MK-4101, achieved through the inhibition of proliferation and induction of extensive apoptosis in tumor cells. Of note, beside antitumor activity on transplanted tumors, MK-4101 was highly efficacious against primary medulloblastoma and BCC developing in the cerebellum and skin of Ptch1+/− mice. By identifying the changes induced by MK-4101 in gene expression profiles in tumors, we also elucidated the mechanism of action of this novel, orally administrable compound. MK-4101 targets the Hh pathway in tumor cells, showing the maximum inhibitory effect on Gli1. MK-4101 also induced deregulation of cell cycle and block of DNA replication in tumors. Members of the IGF and Wnt signaling pathways were among the most highly deregulated genes by MK-4101, suggesting that the interplay among Hh, IGF, and Wnt is crucial in Hh-dependent tumorigenesis. Altogether, the results of this preclinical study support a therapeutic opportunity for MK-4101 in the treatment of Hh-driven cancers, also providing useful information for combination therapy with drugs targeting pathways cooperating with Hh oncogenic activity. Mol Cancer Ther; 15(6); 1177–89. ©2016 AACR.
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- 2015
49. Acceleration of atherogenesis in ApoE-/- mice exposed to acute or low-dose-rate ionizing radiation
- Author
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Simonetta Pazzaglia, Soile Tapio, Emanuela Pasquali, Paola Giardullo, Mariateresa Mancuso, Ignacia Braga-Tanaka, Anna Saran, Alessandro Pannicelli, Michael J. Atkinson, Satoshi Tanaka, Mancuso, Mariateresa, Pasquali, Emanuela, Braga-Tanaka, Ignacia, Tanaka, Satoshi, Pannicelli, Alessandro, Giardullo, Paola, Pazzaglia, Simonetta, Tapio, Soile, Atkinson, Michael J., Saran, Anna, Saran, A., Pazzaglia, S., Pannicelli, A., Pasquali, E., and Mancuso, M.
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Apolipoprotein E ,Time Factors ,Radiobiology ,Time Factor ,Aortic Diseases ,Aorta, Thoracic ,Radiation Dosage ,Risk Assessment ,ApoE mice ,Ionizing radiation ,03 medical and health sciences ,Apolipoproteins E ,0302 clinical medicine ,medicine.artery ,medicine ,Animals ,Thoracic aorta ,Low dose rate ,Aorta ,030304 developmental biology ,Mice, Knockout ,0303 health sciences ,Radiation ,Apoe mice ,Animal ,business.industry ,Apoe Mice ,Atherosclerosis ,Dose-Response Relationship, Radiation ,Aortic Disease ,Plaque, Atherosclerotic ,3. Good health ,radiation ,Mice, Inbred C57BL ,aorta ,Radiation Injuries, Experimental ,Oncology ,Atherosclerosi ,030220 oncology & carcinogenesis ,Linear Models ,Disease Progression ,Linear Model ,Female ,business ,Dose rate ,Nuclear medicine ,Moderate-Dose ,Research Paper - Abstract
// Mariateresa Mancuso 1 , Emanuela Pasquali 1 , Ignacia Braga-Tanaka III 2 , Satoshi Tanaka 2 , Alessandro Pannicelli 3 , Paola Giardullo 4, 5 , Simonetta Pazzaglia 1 , Soile Tapio 6 , Michael J. Atkinson 6 , Anna Saran 1 1 Laboratory of Radiation Biology and Biomedicine, Agenzia Nazionale per le Nuove Tecnologie, l'Energia e lo Sviluppo Economico Sostenibile (ENEA), Rome, Italy 2 Institute for Environmental Sciences (IES), Rokkasho, Aomori, Japan 3 Technical Unit of Energetic Efficiency, ENEA, Rome, Italy 4 Department of Radiation Physics, Guglielmo Marconi University, Rome, Italy 5 Department of Sciences, Roma Tre University, Rome, Italy 6 Helmholtz Zentrum Munchen, German Research Center for Environmental Health, Institute of Radiation Biology, Neuherberg, Germany Correspondence to: Mariateresa Mancuso, e-mail: mariateresa.mancuso@enea.it Anna Saran, e-mail: anna.saran@enea.it Keywords: atherosclerosis, ApoE mice, radiation, aorta Received: June 04, 2015 Accepted: August 10, 2015 Published: August 22, 2015 ABSTRACT There is epidemiological evidence for increased non-cancer mortality, primarily due to circulatory diseases after radiation exposure above 0.5 Sv. We evaluated the effects of chronic low-dose rate versus acute exposures in a murine model of spontaneous atherogenesis. Female ApoE −/− mice (60 days) were chronically irradiated for 300 days with gamma rays at two different dose rates (1 mGy/day; 20 mGy/day), with total accumulated doses of 0.3 or 6 Gy. For comparison, age-matched ApoE −/− females were acutely exposed to the same doses and sacrificed 300 days post-irradiation. Mice acutely exposed to 0.3 or 6 Gy showed increased atherogenesis compared to age-matched controls, and this effect was persistent. When the same doses were delivered at low dose rate over 300 days, we again observed a significant impact on global development of atherosclerosis, although at 0.3 Gy effects were limited to the descending thoracic aorta. Our data suggest that a moderate dose of 0.3 Gy can have persistent detrimental effects on the cardiovascular system, and that a high dose of 6 Gy poses high risks at both high and low dose rates. Our results were clearly nonlinear with dose, suggesting that lower doses may be more damaging than predicted by a linear dose response.
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- 2015
50. Hair Cycle–Dependent Basal Cell Carcinoma Tumorigenesis in Ptc1neo67/+ Mice Exposed to Radiation
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S. Rebessi, Vincenzo Covelli, Mariateresa Mancuso, Anna Saran, Emanuela Pasquali, Mirella Tanori, Simona Leonardi, Vincenzo Di Majo, Maria Pierdomenico, and Simonetta Pazzaglia
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Male ,Patched Receptors ,Cancer Research ,Pathology ,medicine.medical_specialty ,Neoplasms, Radiation-Induced ,Skin Neoplasms ,Cell ,Kruppel-Like Transcription Factors ,Loss of Heterozygosity ,Receptors, Cell Surface ,Allelic Imbalance ,Zinc Finger Protein Gli2 ,Biology ,medicine.disease_cause ,Outer root sheath ,Zinc Finger Protein GLI1 ,Mice ,Hair cycle ,medicine ,Animals ,Cell Lineage ,Basal cell carcinoma ,Progenitor cell ,Skin ,integumentary system ,Stem Cells ,Cancer ,Hair cycle phase ,medicine.disease ,Patched-1 Receptor ,medicine.anatomical_structure ,Oncology ,Carcinoma, Basal Cell ,Female ,Carcinogenesis ,Hair Follicle - Abstract
We examined the effects of hair cycle phase on basal cell carcinoma (BCC) tumorigenesis induced by radiation in mice lacking one Patched allele (Ptc1neo67/+). Our results show that Ptc1neo67/+ mouse skin irradiated in early anagen is highly susceptible to tumor induction, as a 3.2-fold incidence of visible BCC-like tumors was observed in anagen-irradiated compared with telogen-irradiated mice. Microscopic nodular BCC-like tumors were also enhanced by irradiation during active hair-follicle growth phases. Interestingly, histologic examination of the tumors revealed a qualitative difference in BCC tumorigenesis depending on hair growth phase at the time of exposure. In fact, in addition to typical BCC-like tumors, we observed development of a distinct basal cell tumor subtype characterized by anti–cytokeratin 14 and anti–smooth muscle actin reactivity. These tumors showed relatively short latency and rapid growth and were strictly dependent on age at irradiation, as they occurred only in mice irradiated in early anagen phase. Examination of anatomic and immunohistochemical relationships revealed a close relation of these tumors with the follicular outer root sheath of anagen skin. In contrast, there are strong indications for the derivation of typical, smooth muscle actin–negative BCC-like tumors from cell progenitors of interfollicular epidermis. These results underscore the role of follicular bulge stem cells and their progeny with high self-renewal capacity in the formation of basal cell tumors and contribute to clarify the relationship between target cell and tumor phenotype in BCC tumorigenesis induced by radiation. (Cancer Res 2006; 66(13): 6606-14)
- Published
- 2006
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