80 results on '"Arrieta, G."'
Search Results
2. Minimally invasive management of Mirizzi syndrome Va: Case series and narrative review of the literature
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Gómez, Daniel, Pedraza, Mauricio, Cabrera, Luis Felipe, Mendoza Zuchini, Andrés, Arrieta G, Manuel, Aparicio, Brandon Steven, and Pulido, Jean
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- 2022
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3. Manejo mínimamente invasivo del síndrome de Mirizzi Va: Reporte de casos y revisión narrativa de la literatura
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Gómez, Daniel, Pedraza, Mauricio, Cabrera, Luis Felipe, Mendoza Zuchini, Andrés, Arrieta G, Manuel, Aparicio, Brandon Steven, and Pulido, Jean
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- 2022
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4. Manejo mínimamente invasivo del síndrome de Mirizzi Va: Reporte de casos y revisión narrativa de la literatura
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Brandon Steven Aparicio, Jean Pulido, Mauricio Pedraza, Daniel Gómez, Luis Felipe Cabrera, Andres Mendoza Zuchini, Manuel Arrieta G, and Pedraza, Mauricio [https://orcid.org/0000-0001-8726-5578]
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Gynecology ,medicine.medical_specialty ,business.industry ,Clasificación ,Mirizzi syndrome ,030230 surgery ,Classification ,Laparoscopia ,Treatment ,03 medical and health sciences ,Laparoscopic ,0302 clinical medicine ,Mirizzi Syndrome ,Tratamiento ,Medicine ,Surgery ,Narrative review ,business ,Síndrome de Mirizzi - Abstract
Introducción El síndrome de Mirizzi (SM) es una patología infrecuente que es un reto para el cirujano. En el manejo quirúrgico, el abordaje abierto o el laparoscópico es un punto de discusión debido a la distorsión anatómica que se presenta. El objetivo de este estudio es analizar nuestra experiencia en el manejo laparoscópico de esta condición en el tipo Va. Materiales Realizamos un estudio descriptivo retrospectivo de pacientes con diagnóstico de SM tipo Va y tratados por abordaje laparoscópico, entre el 2014 y 2019, en dos centros de alto volumen de Bogotá, Colombia. Resultados Se evaluaron 1.073 pacientes que presentaron complicaciones por cálculos biliares, de los cuales 16 fueron diagnosticados con SM tipo Va. El 75% eran femeninos y el 25% masculinos; el 80% presentó ictericia y el 90% dolor abdominal. Doce pacientes presentaron fístula colecistoduodenal y cuatro fístula colecistocólica. Todos se manejaron de manera laparoscópica, en el 100% se logró realizar colecistectomía total y resección de fístula con cierre primario. La tasa de conversión fue del 0%, no hubo reingresos ni reintervención. El periodo de seguimiento fue de 18 meses. Conclusión El manejo laparoscópico en el SM es posible y seguro, teniendo en cuenta la experiencia del grupo quirúrgico y realizando una adecuada selección de los pacientes. Introduction Mirizzi's Syndrome (MS) is a rare pathology, known to be a challenge for the surgeon. In the surgical management, open approach vs laparoscopic is a topic of discussion due to anatomic variations. The aim of this study is to analyze our experience in the laparoscopic management of this condition in Type Va. Methods We made a descriptive retrospective study of patients diagnosed with MS type Va and treated by laparoscopic approach from 2014 to 2019, in two high volume centers of Bogotá, Colombia. Results 1073 patients who presented complications from gallstones were evaluated, of which 16 were diagnosed with MS type Va. 75% were females and 25% males; 80% presented jaundice and 90% abdominal pain; 12 patients showed cholecystoduodenal fistula and 4 cholecystocolic fistula. All patients underwent laparoscopic management, total cholecystectomy and fistula resection with primary closure was possible on a 100% of the patients. Conversion rate was 0%. The follow up was 18 months. Conclusion Laparoscopic management of MS is feasible and safe; the experience of the surgery group and selection of the patients is the key to a successful outcome.
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- 2022
5. [Effectiveness of simulation in endoscopic retrograde cholangiopancreatography (ERCP) for successful bile duct cannulation: systematic review and meta-analysis]
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Manuel, Arrieta G, Luis Carlos, Domínguez, and Neil, Valentin Vega
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Cholangiopancreatography, Endoscopic Retrograde ,Sphincterotomy, Endoscopic ,Humans ,Bile Ducts ,Catheterization - Abstract
The evidence for simulation in endoscopic retrograde cholangiopancreatography is limited.The objective of this study is to review the effectiveness of simulation in endoscopist training in endoscopic retrograde cholangiopancreatography with emphasis on the successful cannulation of the bile duct, as well as on the cannulation time and performance evaluation.A systematic review was conducted in MEDLINE, EMBASE, and Web of Science, from 1970 to June 2021. Randomized clinical studies comparing endoscopic retrograde cholangiopancreatography simulated training versus traditional training were included.4 studies were included, with a total of 80 participants and 1,475 procedures. The odds ratio (OR) for successful bile duct cannulation with the use of simulation was 2.12 (95% CI, 1.60-2.81) and the mean time to cannulation was shorter compared to traditional training (p0.001). Two studies found a better score in the global performance of endoscopists with simulated training (OR: 1.86 (95% CI 1.29-2.7)) and (OR2.98 (95% CI, 1.38-6.43).Endoscopic retrograde cholangiopancreatography simulation can improve the performance of endoscopists in terms of time and successful bile duct cannulation.
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- 2022
6. Effectiveness of simulation in endoscopic retrograde cholangiopancreatography (ERCP) for successful bile duct cannulation: systematic review and meta-analysis
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Manuel Arrieta G., Luis Carlos Dominguez, and Neil Valentin Vega
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General Medicine ,Colangiopancreatografia retrógrada endoscópica ,Simulación ,Conductos biliares ,Efectividad ,Cholangiopancreatography, endoscopic retrograde ,Simulation technique ,Bile ducts ,Effectiveness - Abstract
Introducción: La evidencia de simulación en colangiopancreatografía retrograda endoscópica es limitada. Objetivo: El objetivo de este estudio es revisar la efectividad de la simulación en entrenamiento de endoscopistas en colangiopancreatografía retrograda endoscópica con énfasis en la canulación exitosa de la vía biliar, así como en el tiempo de canulación y evaluación del desempeño. Materiales y métodos: Se realizó una revisión sistemática en MEDLINE, EMBASE y Web of Science, desde 1970 hasta junio 2021. Se incluyeron estudios clínicos aleatorizados que compararan el entrenamiento simulado de colangiopancreatografía retrograda endoscópica versus el entrenamiento tradicional. Resultados: Se incluyeron 4 estudios, con un total de 80 participantes y 1 475 procedimientos. El odds ratio (OR) para canulación exitosa de la vía biliar con el uso de simulación fue de 2,12 (95% IC, 1,60-2,81) y el tiempo medio de canulación fue menor con respecto al entrenamiento tradicional (p
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- 2021
7. Efectividad de la simulación en colangiopancreatografía retrograda endoscópica (CPRE) para la canulación exitosa de la vía biliar: revisión sistemática y metaánalisis
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Arrieta G., Manuel, primary, Dominguez, Luis Carlos, additional, and Vega, Neil Valentin, additional
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- 2021
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8. Minimally invasive management of Mirizzi syndrome Va: Case series and narrative review of the literature
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Daniel Gómez, Mauricio Pedraza, Luis Felipe Cabrera, Andrés Mendoza Zuchini, Manuel Arrieta G, Brandon Steven Aparicio, and Jean Pulido
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Male ,Cholecystectomy, Laparoscopic ,General Engineering ,Humans ,Cholecystectomy ,Female ,Gallstones ,Mirizzi Syndrome ,Retrospective Studies - Abstract
Mirizzi's Syndrome (MS) is a rare pathology, known to be a challenge for the surgeon. In the surgical management, open approach vs laparoscopic is a topic of discussion due to anatomic variations. The aim of this study is to analyze our experience in the laparoscopic management of this condition in Type Va.We made a descriptive retrospective study of patients diagnosed with MS type Va and treated by laparoscopic approach from 2014 to 2019, in two high volume centers of Bogotá, Colombia.1073 patients who presented complications from gallstones were evaluated, of which 16 were diagnosed with MS type Va. 75% were females and 25% males; 80% presented jaundice and 90% abdominal pain; 12 patients showed cholecystoduodenal fistula and 4 cholecystocolic fistula. All patients underwent laparoscopic management, total cholecystectomy and fistula resection with primary closure was possible on a 100% of the patients. Conversion rate was 0%. The follow up was 18 months.Laparoscopic management of MS is feasible and safe; the experience of the surgery group and selection of the patients is the key to a successful outcome.
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- 2021
9. Haplotype data for 12 Y-chromosome STR loci from Costa Rica
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Villalta, M., Rodriguez, A., González, L., Arce, V., Arrieta, G., Morales, A., Gusmão, L., and Espinoza, M.
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- 2008
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10. Results of the GEP-ISFG collaborative study on an X-STR Decaplex
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Gusmão, L., Alves, C., Sánchez-Diz, P., Zarrabeitia, M.T., Abovich, M.A., Aragón, I., Arce, B., Arrieta, G., Arroyo, E., Atmetlla, I., Baeza, C., Bobillo, M.C., Cainé, L., Campos, R., Caraballo, L., Carvalho, E., Carvalho, M., Cicarelli, R.M.B., Comas, D., Corach, D., Espinoza, M., Espinheira, M.R., Rendo, F., García, O., Gomes, I., González, A., Hernández, A., Hidalgo, M., Lozano, P., Malaghini, M., Manzanares, D., Martínez, B., Martins, J.A., Maxzud, K., Miguel, I., Modesti, N., Montesino, M., Ortiz, R., Pestano, J.J., Pinheiro, M.F., Prieto, L., Raimondi, E., Riancho, J.A., Rodríguez, M.B., Salgado, I., Salgueiro, N., Sánchez, J.J., Silva, S., Toscanini, U., Vidales, C., Silva, C.V., Villalobos, M.C., Vullo, C., Yurrebaso, I., Zubillaga, A.I., Carracedo, A., and Amorim, A.
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- 2008
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11. Biomechanical evaluation of oversized drilling technique on primary implant stability measured by insertion torque and resonance frequency analysis
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Santamaria-Arrieta, G, primary, Brizuela-Velasco, A, additional, Fernandez-Gonzalez, FJ, additional, Chavarri-Prado, D, additional, Chento-Valiente, Y, additional, Solaberrieta, E, additional, Dieguez-Pereira, M, additional, Vega, JA, additional, and Yurrebaso-Asua, J, additional
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- 2016
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12. Environmental diagnosis methodology to analyze landfill-associated risks in Colombia
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Arrieta, G., primary, Requena, I., additional, Toro, J., additional, and Zamorano, M., additional
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- 2015
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13. Diversity of Bacillus thuringiensis strains isolated from coffee plantations infested with the coffee berry borer Hypothenemus hampei
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Arrieta, G., Hernández, A., and Espinoza, A. M.
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coffee ,Bacterial Toxins ,cristales ,Bacillus thuringiensis ,Coffee ,Polymerase Chain Reaction ,Hemolysin Proteins ,Bacterial Proteins ,crystals ,Hypothenemus hampei ,Animals ,Pest Control, Biological ,lcsh:QH301-705.5 ,genes cry ,delta -endotoxinas ,Bacillus thuringiensis Toxins ,delta -endotoxins ,cafe ,cry genes ,Genetic Variation ,café ,Coleoptera ,Endotoxins ,D-endotoxins ,lcsh:Biology (General) ,Microscopy, Electron, Scanning ,D-endotoxinas ,Electrophoresis, Polyacrylamide Gel - Abstract
The coffee berry borer Hypothenemus hampei Ferrari (Coleoptera: Scolytidae) was first reported infecting Costa Rican coffee plantations in the year 2000. Due to the impact that this plague has in the economy of the country, we were interested in seeking new alternatives for the biological control of H. hampei, based on the entomopathogenic bacteria Bacillus thuringiensis. Atotal of 202 B. thuringiensis isolates obtained from Costa Rican coffee plantations infested with H. hampei were analyzed through crystal morphology of the crystal inclusions and SDS-PAGE of d-endotoxins, while 105 strains were further evaluated by PCR for the presence cry, cyt and vip genes. Most of the Bt strains showed diverse crystal morphologies: pleomorphic (35%), oval (37%), bipyramidal (3%), bipyramidal and oval (12%), bipyramidal, oval and pleomorphic (10%) and bipyramidal, oval and cubic (3%). The SDS-PAGE analyses of the crystal preparations showed five strains with d-endotoxin from 20 to 40 kDa, six from 40 to 50 kDa, seven from 50 to 60 kDa, 19 from 60 to 70 kDa, 29 from 70 to 100 kDa and 39 from 100-145 kDa. PCR analyses demonstrated that the collection showed diverse cry genes profiles having several genes per strain: 78 strains contained the vip3 gene, 82 the cry2 gene, 45 the cry1 and 29 strains harbored cry3-cry7 genes. Atotal of 13 strains did not amplified with any of the cry primers used: cry1, cry2, cry3-7, cry5, cry11, cry12 and cry14. Forty-three different genetic profiles were found, mainly due to the combination of cry1A genes with other cry and vip genes. The genetic characterization of the collection provides opportunities for the selection of strains to be tested in bioassays against H. hampei and other insect pests of agricultural importance. En el año 2000 se reportó por primera vez la principal plaga del cafeto, conocida como broca (Hypothenemus hampei Ferrari) (Coleoptera: Scolitidae) en plantaciones de este cultivo en Costa Rica. Debido al impacto que esta plaga tiene en la economía del país, surgió la necesidad de encontrar una alternativa para el control biológico de esta plaga, basadas en la bacteria entomopatógena Bacillus thuringiensis. El objetivo de este trabajo fue aislar y caracterizar cepas de Bacillus thuringiensis a partir de plantaciones de café infestadas con H. hampei. Se aislaton 202 cepas que se analizaron mediante la morfología del cristal, SDS-PAGE de las d-endotoxinas, mientras que 105 cepas se evaluaron mediante PCR para determinar la presencia de genes cry, cyt y vip. La mayoría de las cepas presentaron diversas morfologías del cristal: pleomórficos (35%), ovalados (37%), bipiramidales (3%), bipiramidales y ovalados (12%), bipiramidales, ovalados y pleomórficos (10%) y bipiramidales, ovalados y cúbicos (3%). El análisis electorforético de las proteínas mostró que 5 cepas contenían d-endotoxinas con pesos moleculares entre los 20 y 40 kDa, 6 entre los 40 y 50 kDa, 7 entre los 50 y 60 kDa, 19 cepas entre los 60 y 70 kDa, 29 entre los 70 y 100 kDa y 39 cepas entre los 100 y 145 kDa. Los análisis mediante PCR mostró que la colección presenta una gran diversidad de genes cry, observándose varios genes por cepa: 78 cepas presentaron el gen vip3, 82 el gen cry2, 45 el gen cry1 y 29 cepas los genes cry3 y cry7. Un total de 13 cepas no amplificaron con los iniciadores cry1, cry2, cry3-7, cry5, cry11cry12 y cry14. Se encontraron 43 perfiles genéticos diferentes, detectándose principalmente la combinación de genes cry1A con otros genes cry o vip. La caracterización genética de esta colección provee información importante para la selección de cepas de Bacillus thuringiensis que se evaluarán mediante bioensayos contra Hypothenemus hampei u otras plagas de importancia económica. Fundación para la Cooperación Costa Rica-Estados Unidos de América//CR-USA/Estados Unidos Programa de Cooperación del Gobierno de México/[]//México Programa Iberoamericano de Ciencia y Tecnología para el Desarrollo//CYTED/España Universidad de Costa Rica/[]/UCR/Costa Rica UCR::Vicerrectoría de Investigación::Unidades de Investigación::Ciencias Básicas::Centro de Investigación en Biología Celular y Molecular (CIBCM)
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- 2007
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14. Utilización de materias primas regionales en la alimentación de equinos criollos adultos en el municipio de Villavicencio
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ARRIETA, G., PEÑA, C, HURTADO NERY, V.L., and IREGUI, A.
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Titulo en ingles: Use of regional raw materials in the feeding of equine mature creoles in the municipality of Villavicencio.RESUMEN: El presente trabajo fue realizado en Catama, Municipio de Villavicencio. Se utilizaron 9 caballos criollos, adultos, machos, castrados. El ensayo fue dividido en dos fases en las que se evaluaron tres raciones; 1. Ración comercial, como testigo; 2.Ración con 12,4% de pica de arroz y sin aceite crudo de palma africana, ACPA y 3. Ración con 0,86% de ACPA y 20,8% de pica de arroz. Fue empleado un diseño experimental totalmente al azar de tres tratamientos con tres repeticiones. En la primera fase experimental se evalúo ganancia de peso, condición corporal y estado físico. En la segunda fase se determinó la digestibilidad total aparente de las raciones, por el método de colecta total de heces; también se estimó la proteína sérica total pre y postprandial en horas 0, 1, 2, 3 y 4. No se encontraron diferencias significativas (P>0.05) en la ganancia de peso ni en la digestibilidad de las diferentes raciones. Los valores de las proteínas séricas totales fue similar en todos los tratamientos. Se concluye que en equinos adultos de trabajo liviano dietas con 12.4% de pica de arroz y sin ACPA, presentan mejor ganancia de peso y mayor digestibilidad de materia seca y fibra cruda.Palabras clave: Aceite, Arroz, equinos, digestibilidad total.ABSTRACT: The present work was carried out in Catama, which is in the municipality of Villavicencio. Nine adult creoles castrated male horses were used. The feeding trial was divided in two phases during which three different rations were evaluated; 1. a commercially prepared ration was used as a control; 2. a ration with 12.4% of rice fibres by product (pica) without palm oil; 3. a ration with 0,86% of palm oil and 20,8% of rice fibres by product(pica). These rations were used at random in an experimental design of three treatments with three repetitions. In the first experimental phase, the horses were evaluated for weight gain, corporal condition, and physical state. During the second phase, apparent total digestibility was determined by the method of total collection of feces, and also total serum protein was also measured in the three treatments pre and postprandial in hours 0, 1, 2, 3, and 4. No significant differences (P >0.05) where encountered in the weight gains, nor in the digestibility of the different rations. The data of the total serum protein was similar in all the treatments. In conclusion, for equine adults doing light work, the best results were obtained with the ration with 12.4% of rice (pica de) without palm oil resulted in the best weight gain, and greater digestibility of dry matter and raw fiber.Key words: horses, total digestibility, oil, rice. Titulo en ingles: Use of regional raw materials in the feeding of equine mature creoles in the municipality of Villavicencio.RESUMEN: El presente trabajo fue realizado en Catama, Municipio de Villavicencio. Se utilizaron 9 caballos criollos, adultos, machos, castrados. El ensayo fue dividido en dos fases en las que se evaluaron tres raciones; 1. Ración comercial, como testigo; 2.Ración con 12,4% de pica de arroz y sin aceite crudo de palma africana, ACPA y 3. Ración con 0,86% de ACPA y 20,8% de pica de arroz. Fue empleado un diseño experimental totalmente al azar de tres tratamientos con tres repeticiones. En la primera fase experimental se evalúo ganancia de peso, condición corporal y estado físico. En la segunda fase se determinó la digestibilidad total aparente de las raciones, por el método de colecta total de heces; también se estimó la proteína sérica total pre y postprandial en horas 0, 1, 2, 3 y 4. No se encontraron diferencias significativas (P>0.05) en la ganancia de peso ni en la digestibilidad de las diferentes raciones. Los valores de las proteínas séricas totales fue similar en todos los tratamientos. Se concluye que en equinos adultos de trabajo liviano dietas con 12.4% de pica de arroz y sin ACPA, presentan mejor ganancia de peso y mayor digestibilidad de materia seca y fibra cruda.Palabras clave: Aceite, Arroz, equinos, digestibilidad total.ABSTRACT: The present work was carried out in Catama, which is in the municipality of Villavicencio. Nine adult creoles castrated male horses were used. The feeding trial was divided in two phases during which three different rations were evaluated; 1. a commercially prepared ration was used as a control; 2. a ration with 12.4% of rice fibres by product (pica) without palm oil; 3. a ration with 0,86% of palm oil and 20,8% of rice fibres by product(pica). These rations were used at random in an experimental design of three treatments with three repetitions. In the first experimental phase, the horses were evaluated for weight gain, corporal condition, and physical state. During the second phase, apparent total digestibility was determined by the method of total collection of feces, and also total serum protein was also measured in the three treatments pre and postprandial in hours 0, 1, 2, 3, and 4. No significant differences (P >0.05) where encountered in the weight gains, nor in the digestibility of the different rations. The data of the total serum protein was similar in all the treatments. In conclusion, for equine adults doing light work, the best results were obtained with the ration with 12.4% of rice (pica de) without palm oil resulted in the best weight gain, and greater digestibility of dry matter and raw fiber.Key words: horses, total digestibility, oil, rice.
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- 2007
15. Quality Control (2004/2005) Performed By The Latin American Society For Forensic Genetics (Sociedad Latinoamericana De Genética Forense)
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Penacino, G., Álvarez, M., Arce, V., Arévalo, J., Arrieta, G., Barretto, R., Basso, Nestor Guillermo, Borja, L., Carbajal, L, Chiarello, A., de Santi, V., Domínguez, V., Espinoza, M., Estrada, M., Fortín, M., Gaviria, A., Gélvez, X., Gentili, A., Giugliani, R., Gómez, M., González, P., Gónzalez, S., Gutiérrez, A., Hau, J., Iannacone, G., Ibarra, A., Iglesias, M., Jaime, J., León, A., Martínez, M., Marti, M., Martins, J., and Olivera, Nelda Lila
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Ciencias Biológicas ,Zoología, Ornitología, Entomología, Etología ,CIENCIAS NATURALES Y EXACTAS - Abstract
Los estudios de genética forense en Latinoamérica son efectuados por laboratorios públicos y privados. La Sociedad Latinoamericana de Genética Forense (www.slagf.or g) posee un programa para favorecer la colaboración y la mejora de la calidad de los resultados obtenidos. El concepto básico del programa es que un caso de paternidad o forense ficticio es enviado y analizado por todos los laboratorios participantes. Además, se incluye un caso teórico para el cálculo del índice correspondiente. Este procedimiento es repetido una vez por año desde 2003, cuando la SLAGF fue creada, y los resultados se comparan con otros controles regionales llevados a cabo durante los años 1998 y 2003. Las muestras deben ser analizadas de acuerdo con los procedimientos y marcadores empleados habitualmente por cada participante. Los resultados se distribuyen a cada uno, y se detectan las variaciones intra e inter-laboratorio. El resultado de cada control de calidad es la base de una discusión para mejorar la calidad de los análisis de ADN, lo cual se ha ido produciendo desde 1998 hasta la fecha. Studies on forensic genetics in Latin America are performed at public and private laboratories. The Latin American Society for Forensic Genetics ( Sociedad Latinoamericana de Genética Forense ) (www.slagf.or g) has a joint program to increase the collaboration and to give support in quality improvement. The basic concept for the program is that one fictitious paternity or forensic case is shipped to and analyzed in all participating laboratories. In addition, a theoretical case is sent in order to do the index calculation. This procedure is repeated once a year since 2003, when the Society was created, and the results were compared with other regional controls performed before (1998 and 2000). The samples should be analyzed according to the local procedures and with the marker systems typically used. The results are distributed to the participating laboratories and both the intra and inter laboratory variations are to be focused upon. The results of each quality control are the basis for a discussion to improve the quality of the tests, as seen from 1998 to date. Fil: Penacino, G.. Sociedad Latinoamericana de Genética Forense; Argentina. Unidad de Análisis de ADN del Colegio Oficial de Farmacéuticos y Bioquímicos de Capital Federal; Argentina Fil: Álvarez, M.. Unidad de Análisis de ADN del Colegio Oficial de Farmacéuticos y Bioquímicos de Capital Federal; Argentina. Sociedad Latinoamericana de Genética Forense; Argentina Fil: Arce, V.. Sociedad Latinoamericana de Genética Forense; Argentina. Unidad de Análisis de ADN del Colegio Oficial de Farmacéuticos y Bioquímicos de Capital Federal; Argentina Fil: Arévalo, J.. Sociedad Latinoamericana de Genética Forense; Argentina. Unidad de Análisis de ADN del Colegio Oficial de Farmacéuticos y Bioquímicos de Capital Federal; Argentina Fil: Arrieta, G.. Sociedad Latinoamericana de Genética Forense; Argentina. Unidad de Análisis de ADN del Colegio Oficial de Farmacéuticos y Bioquímicos de Capital Federal; Argentina Fil: Barretto, R.. Sociedad Latinoamericana de Genética Forense; Argentina. Unidad de Análisis de ADN del Colegio Oficial de Farmacéuticos y Bioquímicos de Capital Federal; Argentina Fil: Basso, Nestor Guillermo. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Centro Nacional Patagónico; Argentina. Sociedad Latinoamericana de Genética Forense; Argentina. Unidad de Análisis de ADN del Colegio Oficial de Farmacéuticos y Bioquímicos de Capital Federal; Argentina Fil: Borja, L.. Sociedad Latinoamericana de Genética Forense; Argentina. Unidad de Análisis de ADN del Colegio Oficial de Farmacéuticos y Bioquímicos de Capital Federal; Argentina Fil: Carbajal, L. Sociedad Latinoamericana de Genética Forense; Argentina. Unidad de Análisis de ADN del Colegio Oficial de Farmacéuticos y Bioquímicos de Capital Federal; Argentina Fil: Chiarello, A.. Sociedad Latinoamericana de Genética Forense; Argentina. Unidad de Análisis de ADN del Colegio Oficial de Farmacéuticos y Bioquímicos de Capital Federal; Argentina Fil: de Santi, V.. Sociedad Latinoamericana de Genética Forense; Argentina. Unidad de Análisis de ADN del Colegio Oficial de Farmacéuticos y Bioquímicos de Capital Federal; Argentina Fil: Domínguez, V.. Sociedad Latinoamericana de Genética Forense; Argentina. Unidad de Análisis de ADN del Colegio Oficial de Farmacéuticos y Bioquímicos de Capital Federal; Argentina Fil: Espinoza, M.. Sociedad Latinoamericana de Genética Forense; Argentina. Unidad de Análisis de ADN del Colegio Oficial de Farmacéuticos y Bioquímicos de Capital Federal; Argentina Fil: Estrada, M.. Sociedad Latinoamericana de Genética Forense; Argentina. Unidad de Análisis de ADN del Colegio Oficial de Farmacéuticos y Bioquímicos de Capital Federal; Argentina Fil: Fortín, M.. Sociedad Latinoamericana de Genética Forense; Argentina. Unidad de Análisis de ADN del Colegio Oficial de Farmacéuticos y Bioquímicos de Capital Federal; Argentina Fil: Gaviria, A.. Sociedad Latinoamericana de Genética Forense; Argentina. Unidad de Análisis de ADN del Colegio Oficial de Farmacéuticos y Bioquímicos de Capital Federal; Argentina Fil: Gélvez, X.. Sociedad Latinoamericana de Genética Forense; Argentina. Unidad de Análisis de ADN del Colegio Oficial de Farmacéuticos y Bioquímicos de Capital Federal; Argentina Fil: Gentili, A.. Sociedad Latinoamericana de Genética Forense; Argentina. Unidad de Análisis de ADN del Colegio Oficial de Farmacéuticos y Bioquímicos de Capital Federal; Argentina Fil: Giugliani, R.. Sociedad Latinoamericana de Genética Forense; Argentina. Unidad de Análisis de ADN del Colegio Oficial de Farmacéuticos y Bioquímicos de Capital Federal; Argentina Fil: Gómez, M.. Sociedad Latinoamericana de Genética Forense; Argentina. Unidad de Análisis de ADN del Colegio Oficial de Farmacéuticos y Bioquímicos de Capital Federal; Argentina Fil: González, P.. Sociedad Latinoamericana de Genética Forense; Argentina. Unidad de Análisis de ADN del Colegio Oficial de Farmacéuticos y Bioquímicos de Capital Federal; Argentina Fil: Gónzalez, S.. Sociedad Latinoamericana de Genética Forense; Argentina. Unidad de Análisis de ADN del Colegio Oficial de Farmacéuticos y Bioquímicos de Capital Federal; Argentina Fil: Gutiérrez, A.. Sociedad Latinoamericana de Genética Forense; Argentina. Unidad de Análisis de ADN del Colegio Oficial de Farmacéuticos y Bioquímicos de Capital Federal; Argentina Fil: Hau, J.. Sociedad Latinoamericana de Genética Forense; Argentina. Unidad de Análisis de ADN del Colegio Oficial de Farmacéuticos y Bioquímicos de Capital Federal; Argentina Fil: Iannacone, G.. Sociedad Latinoamericana de Genética Forense; Argentina. Unidad de Análisis de ADN del Colegio Oficial de Farmacéuticos y Bioquímicos de Capital Federal; Argentina Fil: Ibarra, A.. Sociedad Latinoamericana de Genética Forense; Argentina. Unidad de Análisis de ADN del Colegio Oficial de Farmacéuticos y Bioquímicos de Capital Federal; Argentina Fil: Iglesias, M.. Sociedad Latinoamericana de Genética Forense; Argentina. Unidad de Análisis de ADN del Colegio Oficial de Farmacéuticos y Bioquímicos de Capital Federal; Argentina Fil: Jaime, J.. Sociedad Latinoamericana de Genética Forense; Argentina. Unidad de Análisis de ADN del Colegio Oficial de Farmacéuticos y Bioquímicos de Capital Federal; Argentina Fil: León, A.. Sociedad Latinoamericana de Genética Forense; Argentina. Unidad de Análisis de ADN del Colegio Oficial de Farmacéuticos y Bioquímicos de Capital Federal; Argentina Fil: Martínez, M.. Sociedad Latinoamericana de Genética Forense; Argentina. Unidad de Análisis de ADN del Colegio Oficial de Farmacéuticos y Bioquímicos de Capital Federal; Argentina Fil: Marti, M.. Sociedad Latinoamericana de Genética Forense; Argentina. Unidad de Análisis de ADN del Colegio Oficial de Farmacéuticos y Bioquímicos de Capital Federal; Argentina Fil: Martins, J.. Sociedad Latinoamericana de Genética Forense; Argentina. Unidad de Análisis de ADN del Colegio Oficial de Farmacéuticos y Bioquímicos de Capital Federal; Argentina Fil: Olivera, Nelda Lila. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Centro Nacional Patagónico; Argentina. Sociedad Latinoamericana de Genética Forense; Argentina. Unidad de Análisis de ADN del Colegio Oficial de Farmacéuticos y Bioquímicos de Capital Federal; Argentina
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- 2006
16. Population genetic data for 18 STR loci in Costa Rica
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Rodríguez, A., Arrieta, G., Sanóu, I., Vargas, M.C., García, O., Yurrebaso, I., Pérez, J.A., Villalta, M., and Espinoza, M.
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- 2007
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17. Utilización de materias primas regionales en la alimentación de equinos criollos adultos en el municipio de Villavicencio
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ARRIETA, G., primary, PEÑA, C, additional, HURTADO NERY, V.L., additional, and IREGUI, A., additional
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- 2007
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18. OSTEOPENIA AND OSTEOPOROSIS IN SYSTEMIC LUPUS ERYTHEMATOSUS. A COMPARATIVE STUDY BETWEEN MALE AND FEMALE PATIENTS
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Hern??ndez-Quiroz, M C, primary, Vera-Lastra, O, additional, Fernandez-Arrieta, G, additional, Medina, G, additional, Angeles, U, additional, Fuentes, Garc??a M., additional, and Jara, L J, additional
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- 2006
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19. Optimization of coffee (Coffea arabica) transformation parameters using uidA and hpt genes: effect of osmotic pre-treatment, helium pressure and target distance
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Andres M Gatica Arias, Arrieta, G., and Espinoza, A. M.
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catuaí ,Costa Rica ,coffea arabica ,caturra ,biolistic delivery ,hpt ,tratamiento osmótico ,Coffea arabica ,Caturra ,Catuaí ,bar ,biobalística ,uidA ,lcsh:Biology (General) ,nptII ,lcsh:QH301-705.5 ,GUSPlus™ ,osmotic treatment - Abstract
The aim of this work was to optimize the biolistic delivery parameters that affect the DNA delivery and stable expression of marker genes into coffee tissues (Coffea arabica. L. cvs. Caturra and Catuaí). The effect of osmotic preculture length, osmotic concentration of medium, Helium pressure and target distance on transient expression of the uidA gene in coffee leaves and somatic embryos were tested. The highest transient uidA expression was obtained when Caturra (18.3±2.8) and Catuaí (6.8±2.0) leaves and Catuaí embryos (80.0±7.4) were cultured for 5h on Yasuda medium complemented with 0.5M Mannitol +0.5M Sorbitol. The combination of 1100psi and a target distance of 9cm resulted in the highest number of blue spots per Caturra leaf segment (23.6±3.9), whereas for the Catuaí variety the combination of 1100psi and a target distance of six (10.2±1.9) and nine (8.2±1.9) cm gave the highest number of blue spots per leaf segment. The optimized protocol was tested with pCAMBIA 1 301 (uidA gene and the hpt gene), pCAMBIA 1 305.2 (uidA version GUSPlus ™ and the hpt gene) and pCAMBIA 1 301-BAR (uidA gene and the bar gene). The highest number of blue spots was obtained when Caturra (54.6±5.7) and Catuaí (28.9±4.3) leaves were bombarded with pCAMBIA 1 305.2. Selection of bombarded coffee tissues with 100mg/l hygromicyn caused the oxidation of tissues. Rev. Biol. Trop. 57 (Suppl. 1): 151-160. Epub 2009 November 30.La presente investigación tuvo como objetivo optimizar los parámetros que afectan la incorporación y expresión de genes marcadores mediante biobalística en segmentos de hoja y embriones somáticos de café (Coffea arabica. L. cvs. Caturra y Catuaí). La mayor expresión transitoria del gen uidA en segmentos de hoja de Caturra (18.3±2.8) y Catuaí (6.8±2.0) y embriones somáticos de Catuaí (80.0±7.4) se obtuvo al cultivar los explantes por cinco horas previo al bombardeo en el medio Yasuda complementado con 0.5M mannitol+0.5M sorbitol. Asimismo, se obtuvo una mayor expresión transitoria del gen uidA al bombardear los segmentos de hoja de Caturra y Catuaí y embriones somáticos de Catuaí con una presión de helio de 1 100psi y una distancia de bombardeo de 6 o 9 cm.
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20. OSTEOPENIA AND OSTEOPOROSIS IN SYSTEMIC LUPUS ERYTHEMATOSUS. A COMPARATIVE STUDY BETWEEN MALE AND FEMALE PATIENTS
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Hernández-Quiroz, M C, Vera-Lastra, O, Fernandez-Arrieta, G, Medina, G, Angeles, U, Fuentes, García M., and Jara, L J
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- 2006
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21. Hard ticks (Ixodida: Ixodidae) in the Colombian Caribbean harbor the Jingmen tick virus: an emerging arbovirus of public health concern.
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López Y, Thomas R, Muñoz-Leal S, López-Mejia Y, Galeano K, Garcia A, Romero L, la Hoz DE, Martinez C, Calderón A, Gastelbondo B, Contreras H, Olivieri G, Rubiano L, Paternina L, Hoyos-López R, Ortiz A, Garay E, Alemán-Santos M, Rivero R, Miranda J, Florez L, Ballesteros J, Contreras V, Tique V, Fragoso P, Guzman C, Arrieta G, and Mattar S
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- Animals, Colombia epidemiology, Caribbean Region, Female, Male, Public Health, High-Throughput Nucleotide Sequencing, Rhipicephalus virology, Rhipicephalus classification, Humans, Amblyomma virology, Dermacentor virology, Phylogeny, Ixodidae virology, Ixodidae classification, Arboviruses genetics, Arboviruses isolation & purification, Arboviruses classification
- Abstract
Background: Ticks are obligate hematophagous ectoparasites involved in transmitting viruses of public health importance. The objective of this work was to identify the Jingmen tick virus in hard ticks from the Colombian Caribbean, an arbovirus of importance for public health., Methods: Ticks were collected in rural areas of Córdoba and Cesar, Colombia. Taxonomic identification of ticks was carried out, and pools of 13 individuals were formed. RNA extraction was performed. Library preparation was performed with the MGIEasy kit, and next-generation sequencing (NGS) with MGI equipment. Bioinformatic analyses and taxonomic assignments were performed using the Galaxy platform, and phylogenetic analyses were done using IQ-TREE2., Results: A total of 766 ticks were collected, of which 87.33% (669/766) were Rhipicephalus microplus, 5.4% (42/766) Dermacentor nitens, 4.2% (32/766) Rhipicephalus linnaei, and 3.0% (23/766) Amblyomma dissimile. Complete and partial segments 1, 2, 3, and 4 of Jingmen tick virus (JMTV) were detected in the metatranscriptome of the species R. microplus, D. nitens, and A. dissimile. The JMTVs detected are phylogenetically related to JMTVs detected in Aedes albopictus in France, JMTVs detected in R. microplus in Trinidad and Tobago, JMTVs in R. microplus and A. variegatum in the French Antilles, and JMTVs detected in R. microplus in Colombia. Interestingly, our sequences clustered closely with JMTV detected in humans from Kosovo., Conclusions: JMTV was detected in R. microplus, D. nitens, and A. dissimile. JMTV could pose a risk to humans. Therefore, it is vital to establish epidemiological surveillance measures to better understand the possible role of JMTV in tropical diseases., (© 2024. The Author(s).)
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- 2024
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22. Case Report: A Case of Sepsis due to Shewanella algae Infection in the Colombian Caribbean.
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Serrano-Coll H, Arrieta A, Miranda J, López A, Mattar AS, Arrieta G, and Mattar S
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- Female, Humans, Aged, 80 and over, Colombia, Ecosystem, Caribbean Region, Gram-Negative Bacterial Infections diagnosis, Gram-Negative Bacterial Infections drug therapy, Sepsis, Shewanella
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Shewanella algae is an opportunistic Gram-negative bacillus that inhabits marine ecosystems and can cause sepsis in humans. This case report describes an 80-year-old obese woman with liver cirrhosis who presented with neurological and respiratory impairment. Shewanella algae were isolated in the blood cultures. Due to age and comorbidities, sepsis could be the cause of the patient's fatal outcome. Shewanella algae infection is a risk for immunocompromised people in the tropics.
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- 2023
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23. SoundScape learning: An automatic method for separating fish chorus in marine soundscapes.
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Kim EB, Frasier KE, McKenna MF, Kok ACM, Peavey Reeves LE, Oestreich WK, Arrieta G, Wiggins S, and Baumann-Pickering S
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- Animals, Acoustics, Fishes, Noise, Ecosystem, Sound
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Marine soundscapes provide the opportunity to non-invasively learn about, monitor, and conserve ecosystems. Some fishes produce sound in chorus, often in association with mating, and there is much to learn about fish choruses and the species producing them. Manually analyzing years of acoustic data is increasingly unfeasible, and is especially challenging with fish chorus, as multiple fish choruses can co-occur in time and frequency and can overlap with vessel noise and other transient sounds. This study proposes an unsupervised automated method, called SoundScape Learning (SSL), to separate fish chorus from soundscape using an integrated technique that makes use of randomized robust principal component analysis (RRPCA), unsupervised clustering, and a neural network. SSL was applied to 14 recording locations off southern and central California and was able to detect a single fish chorus of interest in 5.3 yrs of acoustically diverse soundscapes. Through application of SSL, the chorus of interest was found to be nocturnal, increased in intensity at sunset and sunrise, and was seasonally present from late Spring to late Fall. Further application of SSL will improve understanding of fish behavior, essential habitat, species distribution, and potential human and climate change impacts, and thus allow for protection of vulnerable fish species.
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- 2023
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24. The effect of preoperative clindamycin in reducing early oral implant failure: a randomised placebo-controlled clinical trial.
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Santamaría Arrieta G, Rodríguez Sánchez F, Rodriguez-Andrés C, Barbier L, and Arteagoitia I
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- Adult, Humans, Clindamycin, Antibiotic Prophylaxis adverse effects, Prospective Studies, Postoperative Complications etiology, Anti-Bacterial Agents therapeutic use, Dental Implants adverse effects, Maxillofacial Prosthesis
- Abstract
Objectives: To assess the effect of preoperative oral clindamycin in reducing early implant failure in healthy adults undergoing conventional implant placement., Materials and Methods: We conducted a prospective, randomised, double-blind, placebo-controlled clinical trial in accordance with the ethical principles and Consolidated Standards of Reporting Trials statement. We included healthy adults who underwent a single oral implant without previous infection of the surgical bed or the need for bone grafting. They were randomly treated with a single dose of oral clindamycin (600 mg) 1 h before surgery or a placebo. All surgical procedures were performed by one surgeon. A single trained observer evaluated all patients on postoperative days 1, 7, 14, 28, and 56. Early dental implant failure was defined as the loss or removal of an implant for any reason. We recorded the clinical, radiological, and surgical variables, adverse events, and postoperative complications. The study outcomes were statistically analysed to evaluate differences between the groups. Furthermore, we calculated the number required to treat or harm (NNT/NNH)., Results: Both the control group and clindamycin group had 31 patients each. Two implant failures occurred in the clindamycin group (NNH = 15, p = 0.246). Three patients had postoperative infections, namely two placebo-treated and one clindamycin-treated, which failed (relative risk: 0.5, CI: 0.05-5.23, absolute risk reduction = 0.03, confidence interval: - 0.07-0.13, NNT = 31, CI: 7.2-∞, and p = 0.5). One clindamycin-treated patient experienced gastrointestinal disturbances and diarrhoea., Conclusions: Preoperative clindamycin administration during oral implant surgery in healthy adults may not reduce implant failure or post-surgical-complications., Clinical Relevance: Oral clindamycin is not efficacy., Trial Registration: The present trial was registered (EudraCT number: 2017-002,168-42). It was approved by the Committee for the Ethics of Research with Medicines of Euskadi (CEIm-E) on 31 October 2018 (internal code number: 201862) and the Spanish Agency of Medicines and Medical Devices (AEMPS) on 18 December 2018., (© 2022. The Author(s).)
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- 2023
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25. Zero by 2030 and OneHealth: The multidisciplinary challenges of rabies control and elimination.
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Bonilla-Aldana DK, Ruiz-Saenz J, Martinez-Gutierrez M, Villamil-Gomez W, Mantilla-Meluk H, Arrieta G, León-Figueroa DA, Benites-Zapata V, Barboza JJ, Muñoz-Del-Carpio-Toia A, Franco OH, Cabrera M, Sah R, Al-Tawfiq JA, Memish ZA, Amer FA, Suárez JA, Henao-Martinez AF, Franco-Paredes C, Zumla A, and Rodriguez-Morales AJ
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- Humans, Animals, Dogs, Disease Eradication, Rabies epidemiology, Rabies prevention & control, Rabies Vaccines, Dog Diseases
- Abstract
Competing Interests: Declaration of competing interest None, except Sir Alimuddin Zumla that acknowledges support from the European and Developing Countries Clinical Trials Partnership EU Horizon 2020 Framework Programme PANDORA-ID-NET, CANTAM-3 and EACCR-3 projects, the UK-UCLHNIHR, and he is a Mahathir Science Award and EU-EDCTP Pascoal Mocumbi Prize Laureate.
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- 2023
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26. Seroprevalence of antibodies against to SARS-CoV 2 in umbilical cord blood in two hospital centers in Córdoba and Sucre, Colombia.
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Berrocal J, Tique-Salleg V, Miranda J, Arrieta G, Echeverri D, Peñate G, Spath D, Mattar AS, and Mattar S
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- Infant, Newborn, Female, Humans, Pregnancy, Adolescent, Young Adult, Adult, Colombia epidemiology, Seroepidemiologic Studies, Fetal Blood, Cross-Sectional Studies, Antibodies, Viral, Hospitals, SARS-CoV-2, COVID-19 epidemiology
- Abstract
Introduction: Pregnant women continue to be vulnerable to COVID-19, and their immunosuppressed state could put them at greater risk of developing more severe forms of the disease. In Colombia and Latin America, there are few studies on the immune response of the newborn against SARS-CoV-2., Aim: To determine the prevalence of SARS-CoV-2 infection in umbilical cord blood in two hospital centers in Córdoba and Sucre., Methods: Between March and June 2021, a prospective descriptive cross-sectional study was carried out. Two hospitals from the departments of Córdoba and Sucre, located in the Northwest Caribbean area of Colombia, participated. Three hundred sixty umbilical cord blood samples were taken at the two hospitals. A commercial ELISA was performed to detect total IgG, IgM, and IgA antibodies against the N protein of SARS-CoV-2. The ethics committee approved the study of the participating institutions., Results: Of 3.291 women who gave birth in the hospital centers included in the study, 360 (11%) participated. Complete clinical data were obtained for 223 women. The mean age of the women was 24 years (range, 15-42). 29.4% (106/360) of the umbilical cord samples had total antibodies against SARS-CoV-2. Pregnant women did not have blood samples taken. 58% of the women were asymptomatic. There was no association between umbilical cord samples, clinical, epidemiological characteristics, and serological response to antibodies to SARS-CoV-2 (p > 0.05)., Conclusions: The prevalence of umbilical cord blood samples was 29.4% for total SARS-CoV-2 antibodies. The study provides essential aspects for the epidemiological approach to neonates infected with SARS-CoV-2., Competing Interests: Competing interests All authors declare no conflict of interest., (Copyright © 2022 The Author(s). Published by Elsevier Ltd.. All rights reserved.)
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- 2022
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27. Immunogenicity and safety of a RBD vaccine against SARS-CoV-2 in a murine model.
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Díaz A, Serrano-Coll H, Botero Y, Calderón A, Arteta-Cueto A, Gastelbondo B, Guzmán C, Rivero R, Martínez C, Marquez T, Arrieta G, and Mattar S
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- Animals, Antibodies, Neutralizing, Antibodies, Viral, COVID-19 Vaccines, Disease Models, Animal, Humans, Mice, Mice, Inbred BALB C, SARS-CoV-2, Spike Glycoprotein, Coronavirus, COVID-19 prevention & control, Viral Vaccines
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Introduction: Although more than half of the world's population is already vaccinated, the appearance of new variants of concern puts public health at risk due to the generation of new immunogens against the virus as a crucial and relevant strategy in the control of these new variants., Methods: A preclinical study used a potential vaccine candidate (RBD, SARS-CoV-2). Four groups of BALB/c mice were used, a control group, an adjuvant group, a group inoculated with one dose of RBD subunit protein, and the fourth group inoculated with two doses of RBD subunit protein., Results: No inflammatory or cellular changes were shown in the mice's anatomopathological evaluation. Higher kinetics and 75% seroconversion were obtained in the mice inoculated with two doses of RBD (P < 0.0001)., Conclusions: The application of two doses of the RBD vaccine candidate in BALB/c mice proved safe and immunogenic against SARS-CoV-2., Competing Interests: Declaration of competing interest The authors declare no conflict of interest., (Copyright © 2022. Published by Elsevier Ltd.)
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- 2022
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28. SARS-CoV-2 in a tropical area of Colombia, a remarkable conversion of presymptomatic to symptomatic people impacts public health.
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Martínez C, Serrano-Coll H, Faccini Á, Contreras V, Galeano K, Botero Y, Herrera Y, Garcia A, Garay E, Rivero R, Contreras H, López Y, Guzmán C, Miranda J, Arrieta G, and Mattar S
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- Adolescent, Adult, Aged, Colombia epidemiology, Cough, Humans, Public Health, COVID-19 diagnosis, COVID-19 epidemiology, SARS-CoV-2 genetics
- Abstract
Background: The ability of SARS-CoV-2 to remain in asymptomatic individuals facilitates its dissemination and makes its control difficult., Objective: To establish a cohort of asymptomatic individuals, change to the symptomatic status, and determine the most frequent clinical manifestations. METHODS: Between April 9 and August 9, 2020, molecular diagnosis of SARS-CoV-2 infection was confirmed in 154 asymptomatic people in contact with subjects diagnosed with COVID-19. Nasopharyngeal swabs were performed on these people in different hospitals in Córdoba, the Caribbean area of Colombia. The genes E, RdRp, and N were amplified with RT-qPCR. Based on the molecular results and the Cq values, the patients were subsequently followed up through telephone calls to verify their health conditions., Results: Overall, of 154 asymptomatic individuals, 103 (66.9%) remained asymptomatic, and 51 (33.1%) changed to symptomatic. The most frequent clinical manifestations in young people were anosmia and arthralgia. Adults showed cough, ageusia, and odynophagia; in the elderly were epigastralgia, dyspnea, and headache. Mortality was 8%., Conclusions: A proportion of 33% of presymptomatic individuals was found, of which four of them died. This high rate could indicate a silent transmission, contributing significantly to the epidemic associated with SARS-CoV-2., (© 2022. The Author(s).)
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- 2022
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29. Human-to-dog transmission of SARS-CoV-2, Colombia.
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Rivero R, Garay E, Botero Y, Serrano-Coll H, Gastelbondo B, Muñoz M, Ballesteros N, Castañeda S, Patiño LH, Ramirez JD, Calderon A, Guzmán C, Martinez-Bravo C, Aleman A, Arrieta G, and Mattar S
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- Animals, Animals, Domestic metabolism, Colombia epidemiology, Dogs, Humans, Mutation, Pandemics, Phylogeny, Protein Binding, Spike Glycoprotein, Coronavirus metabolism, COVID-19, SARS-CoV-2 genetics
- Abstract
Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2), the causative agent of the current COVID-19 pandemic, has evolved to have a wide range of hosts, including non-human primates, wild and domestic animals. The ACE2 protein has a high level of conservation and is the common receptor invertebrate species for a viral infection to occur; this receptor could give rise to anthroponotic events. This article describes the first event of symptomatic transmission in Latin America from a human to a dog by the B.1.625 lineage of SARS-CoV-2. We found 21 shared mutations in the complete genomes of viral sequences from owners and dogs. Further phylogenetic and molecular analysis showed that 100% co-localization of the clade helps to understand human-animal transmission. Prediction of the Spike protein structure of the sequenced virus and docking analyzes showed that the E484K mutation in the receptor-binding domain (RBD) could contribute to the viral affinity of dACE2. Therefore, close contact between SARS-CoV-2-infected humans and pets should be avoided to prevent the emergence of novel mutations of public health importance from anthroponotic events., (© 2022. The Author(s).)
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- 2022
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30. Religious and Spiritual Practices: Association with Dispositional Optimism in an Underprivileged Population in Lascano, Uruguay.
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Cid A, Stokes CE, Arrieta G, and Ponce de León MM
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- Humans, Optimism, Spirituality, Uruguay, Personality, Vulnerable Populations
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Optimism seems to foster the ability to manage adverse situations better-a finding especially relevant for disadvantaged populations. Employing a unique sample from a small underprivileged village, we studied the association between religious/spiritual practices and dispositional optimism. The village belongs to a developing country that is, by far, the most secular country in Latin America; this makes it particularly interesting for exploring the role of religious/spiritual practices in this context. We found that these practices were positively associated with higher optimism, measured by the Life Orientation Test-Revised (LOT-R): those who practice spirituality, score, on average, 14.4 percentage points higher on the LOT-R than those who did not. This association seems to be especially robust in the case of the poor and less educated: those with religious/spiritual practices score 20 percentage points higher on the LOT-R. Thus, the role that these practices may play in dispositional optimism in disadvantaged populations deserves more attention., (© 2021. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.)
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- 2022
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31. SARS-CoV-2 in eight municipalities of the Colombian tropics: high immunity, clinical and sociodemographic outcomes.
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Garay E, Serrano-Coll H, Rivero R, Gastelbondo B, Faccini-Martínez Á, Berrocal J, Pérez A, Badillo M, Martínez-Bravo C, Botero Y, Arrieta G, Calderón A, Galeano K, López Y, Miranda J, Guzmán C, Contreras V, Arosemena A, Contreras H, Brango-Tarra E, Oviedo M, and Mattar S
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- Antibodies, Viral, Cities epidemiology, Colombia epidemiology, Cross-Sectional Studies, Humans, Seroepidemiologic Studies, COVID-19, SARS-CoV-2
- Abstract
Background: Serological evaluation of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is an alternative that allows us to determine the prevalence and dynamics of this infection in populations. The goal of this study was to determine the clinical and sociodemographic dynamics of SARS-CoV-2 infection in a region of the Colombian Caribbean., Methods: Between July and November 2020, a cross-sectional observational study was carried out in Córdoba, located in northeast Colombia in the Caribbean area. Eight municipalities with the largest populations were chosen and 2564 blood samples were taken. A commercial enzyme-linked immunosorbent assay was used with the recombinant protein antigen N of SARS-CoV-2. The people included in the study were asked for sociodemographic and clinical data, which were analysed by statistical methods., Results: A seroprevalence of 40.8% was obtained for SARS-CoV-2 in the Córdoba region. In the bivariate analysis, no differences were observed in seropositivity against SARS-CoV-2 for gender or age range (p>0.05). Higher seropositivity was found in low socio-economic status and symptomatic patients (p<0.0001). A total of 30.7% of the asymptomatic patients were seropositive for SARS-CoV-2, which could be linked to the spread of this infection. In the multivariate analysis, seroconversion was related to poverty and clinical manifestations such as anosmia and ageusia (p<0.05)., Conclusions: The high seropositivity in Córdoba is due to widespread SARS-CoV-2 in this population. The relationship between seropositivity and socio-economic status suggests a higher exposure risk to the virus caused by informal economic activities in low-income groups. Clinical manifestations such as anosmia and ageusia could be clinical predictors of infection by the new emergent coronavirus., (© The Author(s) 2021. Published by Oxford University Press on behalf of Royal Society of Tropical Medicine and Hygiene.)
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- 2022
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32. [Effectiveness of simulation in endoscopic retrograde cholangiopancreatography (ERCP) for successful bile duct cannulation: systematic review and meta-analysis].
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Arrieta G M, Domínguez LC, and Valentin Vega N
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- Bile Ducts, Humans, Sphincterotomy, Endoscopic, Catheterization, Cholangiopancreatography, Endoscopic Retrograde
- Abstract
Introduction: The evidence for simulation in endoscopic retrograde cholangiopancreatography is limited., Objective: The objective of this study is to review the effectiveness of simulation in endoscopist training in endoscopic retrograde cholangiopancreatography with emphasis on the successful cannulation of the bile duct, as well as on the cannulation time and performance evaluation., Materials and Methods: A systematic review was conducted in MEDLINE, EMBASE, and Web of Science, from 1970 to June 2021. Randomized clinical studies comparing endoscopic retrograde cholangiopancreatography simulated training versus traditional training were included., Results: 4 studies were included, with a total of 80 participants and 1,475 procedures. The odds ratio (OR) for successful bile duct cannulation with the use of simulation was 2.12 (95% CI, 1.60-2.81) and the mean time to cannulation was shorter compared to traditional training (p<0.001). Two studies found a better score in the global performance of endoscopists with simulated training (OR: 1.86 (95% CI 1.29-2.7)) and (OR2.98 (95% CI, 1.38-6.43)., Conclusions: Endoscopic retrograde cholangiopancreatography simulation can improve the performance of endoscopists in terms of time and successful bile duct cannulation.
- Published
- 2021
33. Minimally invasive management of Mirizzi syndrome Va: Case series and narrative review of the literature.
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Gómez D, Pedraza M, Cabrera LF, Mendoza Zuchini A, Arrieta G M, Aparicio BS, and Pulido J
- Abstract
Introduction: Mirizzi's Syndrome (MS) is a rare pathology, known to be a challenge for the surgeon. In the surgical management, open approach vs laparoscopic is a topic of discussion due to anatomic variations. The aim of this study is to analyze our experience in the laparoscopic management of this condition in Type Va., Methods: We made a descriptive retrospective study of patients diagnosed with MS type Va and treated by laparoscopic approach from 2014 to 2019, in two high volume centers of Bogotá, Colombia., Results: 1073 patients who presented complications from gallstones were evaluated, of which 16 were diagnosed with MS type Va. 75% were females and 25% males; 80% presented jaundice and 90% abdominal pain; 12 patients showed cholecystoduodenal fistula and 4 cholecystocolic fistula. All patients underwent laparoscopic management, total cholecystectomy and fistula resection with primary closure was possible on a 100% of the patients. Conversion rate was 0%. The follow up was 18 months., Conclusion: Laparoscopic management of MS is feasible and safe; the experience of the surgery group and selection of the patients is the key to a successful outcome., (Copyright © 2021 AEC. Publicado por Elsevier España, S.L.U. All rights reserved.)
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- 2021
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34. Epidemiological and viral features of a cohort of SARS-CoV-2 symptomatic and asymptomatic individuals in an area of the Colombian Caribbean.
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Mattar S, Martinez-Bravo C, Rivero R, Contreras H, Faccini-Martínez ÁA, Guzman-Teran C, Galeano K, Alvis-Guzman N, Contreras V, Arrieta G, Gonzalez-Tous M, Miranda J, Ospina M, Camargo-Assis F, Mercado-Reyes M, Garay E, Garcia-Perez A, Lopez Y, and Tique V
- Subjects
- Adolescent, Adult, Aged, 80 and over, COVID-19 transmission, Caribbean Region epidemiology, Carrier State epidemiology, Child, Child, Preschool, Colombia, Female, Humans, Infant, Male, Middle Aged, Prospective Studies, SARS-CoV-2 genetics, Socioeconomic Factors, Viral Load, Young Adult, COVID-19 epidemiology, COVID-19 etiology
- Abstract
Background: Severe acute respiratory syndrome Coronavirus 2 (SARS-CoV-2) is an emerging viral pandemic disease. In the last 6 months, SARS-CoV-2 has caused millions of reported cases and hundreds of thousands of deaths. As other world regions, South America has not contained the pandemic's advance since it lacks the hospital and economic capacities. Public health implications of transmission, while the asymptomatic/presymptomatic infection is a critical concern at the current pandemic., Objective: Describe the socio-demographic, clinical, and viral features of a cohort of SARS-CoV-2 infected individuals from the Colombian Caribbean., Methods: Six hundred eighty-six clinical samples of suspected SARS-CoV-2 infection cases and contacts individuals from several hospital centers in the department of Córdoba, Colombia, were received at our laboratory between April 9th and May 16th, 2020. RNA was extracted using lysis buffers and spin columns. The samples were tested for SARS-CoV-2 by reverse transcription real-time polymerase chain reaction (RT-qPCR) using commercially available multiplex real-time PCR assay for simultaneous detection of 3 target genes of SARS-CoV-2 (Allplex™, 2019-nCoV assay, Korea). Viral copies quantification was done using a standard curve constructed from seriated dilutions of a SARS-CoV-2 positive control. Statics descriptive methods were used., Results: Thirty-five nasopharyngeal samples were positive for SARS-CoV-2 infection; the average age was 43 (range, 1-95 years). Seventeen of 35 (49%) of the patients showed symptoms. Most of them had a cough, fever, and odynophagia; three of the patients reported having arthralgia. Only two patients required hospitalization. None of the patients had known co-morbidities. RT-qPCR results show that two of the symptomatic patients had significantly higher RNA copies than the rest. Eighteen of 35 (51%) individuals were asymptomatic, and the average age was 30 (range, 6-61 years). Four asymptomatic individuals showed a higher copy than some symptomatic patients; nonetheless, the average of RNA copies 8.26 × 10
10 was lower than the symptomatic., Conclusions: This study shows that asymptomatic patients may develop infections with a high number of RNA copies. Since a considerable percentage of infections may be asymptomatic/presymptomatic, enhanced testing approaches may be needed to detect these persons. Due the occurrence of a large proportion of infections being a result from transmission originated in asymptomatic/presymptomatic individuals, public health interventions in Colombia should be based on two steps: a massive molecular screening, and viral load quantification. Finally, a remarkable issue in our study is the average age of symptomatic and asymptomatic groups (43 and 30 respectively) which may be important because of the economic impact that has been caused by the coronavirus pandemic and may be probably the cause of the reduced lethality observed in the country and the department at the time of this study.- Published
- 2020
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35. Serological cross-reactivity using a SARS-CoV-2 ELISA test in acute Zika virus infection, Colombia.
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Faccini-Martínez ÁA, Rivero R, Garay E, García A, Mattar S, Botero Y, Galeano K, Miranda J, Martínez C, Guzmán C, Arrieta G, Contreras H, Kerguelen H, Moscote M, Brango E, and Contreras V
- Subjects
- Adolescent, Adult, Aged, Antibodies, Viral blood, COVID-19 blood, COVID-19 epidemiology, COVID-19 virology, Child, Child, Preschool, Colombia epidemiology, Enzyme-Linked Immunosorbent Assay, Female, Humans, Male, Middle Aged, Pandemics, Young Adult, Zika Virus Infection blood, Zika Virus Infection epidemiology, Zika Virus Infection virology, Antibodies, Viral immunology, COVID-19 immunology, Cross Reactions, SARS-CoV-2 immunology, Zika Virus immunology, Zika Virus Infection immunology
- Abstract
Objectives: We investigated seroreactivity by using a commercial SARS-CoV-2 ELISA test in samples collected from different groups of individuals, including patients diagnosed to have Dengue, Zika, and Chikungunya infection between 2015 and 2019, from an endemic area in the Caribbean Colombian region., Methods: A total of 127 sera samples obtained from six different groups of individuals were included in this study: Group A: patients with confirmed SARS-CoV-2 infection; Group B: patients with symptoms suggestive of COVID-19 or asymptomatic contacts with confirmed patients; Group C: patients with acute or recent dengue virus infection; Group D: patients with acute Zika virus infection; Group E: patients with previous Chikungunya virus infection; and Group F: individuals with exposure to spotted fever group rickettsiae., Results: Overall, group A, group B, and group D showed seroreactivity to SARS-CoV-2 in 92%, 75%, and 26% of samples, respectively; furthermore, group C, group E, and group F showed 100% seronegativity., Conclusions: We found 26% of serological cross-reactivity in patients with acute Zika virus infection by using a commercial SARS-CoV-2 ELISA test. Further studies are needed to evaluate whether serological cross-reaction is maintained with time in nonacute patients with previous exposure to the Zika virus and its effect in SARS-CoV-2 serosurveys in endemic areas for this arbovirus., (Copyright © 2020 The Authors. Published by Elsevier Ltd.. All rights reserved.)
- Published
- 2020
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36. Severe Acute Respiratory Syndrome Coronavirus 2 Seroprevalence Among Adults in a Tropical City of the Caribbean Area, Colombia: Are We Much Closer to Herd Immunity Than Developed Countries?
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Mattar S, Alvis-Guzman N, Garay E, Rivero R, García A, Botero Y, Miranda J, Galeano K, de La Hoz F, Martínez C, Arrieta G, Faccini-Martínez ÁA, Guzmán C, Kerguelen H, Moscote M, Contreras H, and Contreras V
- Abstract
A serological survey was carried out in Monteria (500 000 population), a mid-size city in Colombia. An overall prevalence of 55.3% (95% confidence interval, 52.5%-57.8%) was found among a sample of 1.368 people randomly selected from the population. Test positivity was related to economic characteristics with the highest prevalence found in the most impoverished areas, representing 83.8% of the city's population. We found a prevalence that might be associated with some important level of population immunity., (Published by Oxford University Press on behalf of Infectious Diseases Society of America 2020.)
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- 2020
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37. Perceptions and Emotional State of Mothers of Children with and without Microcephaly after the Zika Virus Epidemic in Rural Caribbean Colombia.
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Romero-Acosta K, Marbán-Castro E, Arroyo K, Arrieta G, and Mattar S
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Zika virus (ZIKV) infection during pregnancy can cause neurological manifestations such as microcephaly. The aim of this study was to explore perceptions of ZIKV and mental health in women exposed to ZIKV during pregnancy in Colombia. This was a mixed-methods study based on structured interviews and psychological tests. Structured interviews were transcribed and analysed with Atlas Ti software. A grounded theory approach was applied. Quantitative analysis was performed with Statistical Package for Social Science, SPSS, V. 20. The study was approved by the Ethics Committee of the Universidad de Córdoba, Montería. Seventeen women participated in the study; nine of them were mothers of children with microcephaly. Maternal age ranged from 16 to 41 years old. The main themes discussed during interviews were: feelings, support, sources of information, and consequences on children's health. Women with children affected by microcephaly showed worse mental health compared to women with normocephalic children. Maternal mental health worsened after 24 months from giving birth. Perceptions regarding disease severity and lack of knowledge were considered to affect maternal mental health. Social support and spirituality were key determinants for caregivers. Future research is needed to further study coping mechanisms and mental health outcomes over time by affected populations.
- Published
- 2020
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38. Influence of time on primary stability of dental implants placed with osteotomes due to the elastic properties of peri-implant bone.
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Pérez-Pevida E, Brizuela-Velasco A, Chávarri-Prado D, Diéguez-Pereira M, Jiménez-Garrudo A, Montalbán-Vadillo O, Viteri-Agustín I, Estrada-Martínez A, and Santamaría-Arrieta G
- Abstract
Background/purpose: The use of osteotomes as a technique for densification and expansion of the residual ridge is one of the most widely used procedures to achieve adequate peri-implant bone quantity and density. The aim of this study was to evaluate the influence of time and the elastic deformation of peri-implant bone in the primary stability of implants placed using osteotomes., Materials and Methods: In each of 10 fresh fragments of cow rib, two implants were placed using osteotomes. The insertion torque and initial implant stability quotient (ISQ) values were measured. In the control implants, the immediate removal torque was measured, while in the test implants, after 15 min of placement, ISQ values were measured again, and the removal torque was measured., Results: There were significant differences between the ISQ values and between the insertion torque and removal torque at 15 min. The ISQ values (perpendicular/parallel) increased between the initial moment (64.4 ± 9/70.3 ± 5.9) and 15 min (66/71.4 ± 6.4). The removal torque at 15 min (12.4 ± 5.8) was lower than the insertion torque (15.9 ± 5.9). Compression of the trabeculae in contact with the implant placed using osteotomes was observed, as well as a greater number of trabecular fractures in the implants placed using conventional drilling., Conclusion: There is an increase in ISQ values of dental implants placed using osteotomes after 15 min of placement., (© 2019 Association for Dental Sciences of the Republic of China. Publishing services by Elsevier B.V.)
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- 2019
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39. Evaluation of serological test of Zika in an endemic area of flavivirus in the Colombian Caribbean.
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Arrieta G, Mattar S, Villero-Wolf Y, Gomezcaceres L, and Doria A
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- Antibodies, Viral blood, Caribbean Region, Humans, Immunoglobulin G blood, Immunoglobulin M blood, Sensitivity and Specificity, Serologic Tests methods, Zika Virus Infection diagnosis
- Abstract
The Zika virus (ZIKV) is an emerging flavivirus transmitted primarily through arthropods, endemic in Africa, Asia, and the Americas, and is considered a global threat by the World Health Organization., Objective: To evaluate a commercial Zika virus test (IgG/IgM catalog number B815C, Biocan, Canada., Methods: We evaluated 30 sera of patients diagnosed with Dengue, Leptospira, Malaria, Hantavirus, and Chikungunya. To establish the sensitivity of the test, two groups of sera were analyzed, the first one was patients with Zika RT-qPCR positive, and the second were patients RT-qPCR negative but with clinical suspicion of Zika., Results: The specificity was of 23.3% (7/30), the sensitivity in acute patients with positive RT-qPCR was of 63.6%, the patients with clinical suspicion of Zika the sensitivity (IgM) was of 80% (n = 8/10). Overall sensitivity (IgM) of both groups was of 71.4% (15/21)., Conclusions: The test showed a low specificity to be used as a serological test in an endemic area of flavivirus infection.
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- 2019
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40. Genomic epidemiology of Chikungunya virus in Colombia reveals genetic variability of strains and multiple geographic introductions in outbreak, 2014.
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Villero-Wolf Y, Mattar S, Puerta-González A, Arrieta G, Muskus C, Hoyos R, Pinzon H, and Peláez-Carvajal D
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- Colombia epidemiology, Genetic Variation genetics, Humans, Phylogeny, RNA, Viral genetics, Whole Genome Sequencing methods, Chikungunya Fever epidemiology, Chikungunya Fever virology, Chikungunya virus classification, Chikungunya virus genetics, Disease Outbreaks, Genome, Viral genetics
- Abstract
Chikungunya virus (CHIKV) is considered a public health problem due to its rapid spread and high morbidity. This study aimed to determine the genetic diversity and phylogenetic relationships of CHIKVs in Colombia. A descriptive and retrospective study was carried out using sera of patients infected with Chikungunya during the outbreak in Colombia. The whole genomes of CHIKV (n = 16) were sequenced with an Illumina Hi-seq 2500 and were assembled using the Iterative Virus Assembler software. A Bayesian inference phylogenetic analysis was carried out with 157 strains of worldwide origin. The Colombian CHIKV sequences were grouped in the Asian genotype; however, three independent phylogenetic subclades were observed, probably the result of three separate introductions from Panama, Nicaragua, and St. Barts. Each subclade showed several different non-synonymous mutations (nsP2-A153V; nsp2-Y543H; nsp2-G720A; nsP3-L458P; Capside R78Q), that may have functional consequences for CHIKV biology and pathogenesis. These same mutations may affect the efficacy of potential CHIKV vaccines.
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- 2019
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41. Lessons learned of emerging Chikungunya virus in two populations of social vulnerability of the Colombian tropics: epidemiological analysis.
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Oviedo-Pastrana M, Méndez N, Mattar S, Arrieta G, and Gomezcaceres L
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Background: Notwithstanding the strong epidemiological impact of the Chikungunya in the Colombian Caribbean, in 2014, not the entire population were affected in the same way. This study describe the demographic, socio-economic, clinical and epidemiological aspects of the de Chikungunya in Ovejas and Corozal, two neighboring municipalities with high vulnerability in health in the Colombian Caribbean., Methods: A cross-sectional study was performed in February 2015. A convenience sampling was carried out in 971 families affected with chikungunya. Also, a socio-demographics, clinical and epidemiological questionnaire was carried out for people who met the definition of suspected Chikungunya clinical case. For the statistical analysis, data and variables, frequencies, proportions and means were compared in the two municipalities studied. A logistic regression model was constructed to explain the effect of factors studied on the risk of family infection (RFI) or likelihood of contagion within each household. Was used the software EpiInfo 7.2.2.2 and a significance level with p -value < 0.05., Results: In Ovejas, 516 households were affected by Chikungunya, 48% (1269/2631) of their inhabitants became sick; in Corozal, 455 families were affected and 42% (839/1999) of their members became sick. The evolution of the epidemic curves of Chikungunya outbreak was different in the two studied areas, the disease was more aggressive in Ovejas. Ten variables were pre-selected by univariate analysis to explain the RFI by Chikungunya, and were integrated into a logistic regression model. The final model was constructed with the following variables: municipality, gender, occupation, family income, use of repellent and fumigation. The logistic model was assessed as appropriate; however, the biases in the selection of the surveyed dwellings and in the selection of symptomatic patients could influence the results., Conclusions: It was demonstrated the epidemiological complexity of Chikungunya and the serious problem caused in populations with high vulnerability in health. The accurate association observed in the logistic regression model suggests the role of the factors studied as determinant in the rate of infection of the Chikungunya; coverage problems and surveillance in health care, demographic aspect, socio-economic problems and lack of preventive measures could explains the risk of family infection by Chikungunya in some areas tropics of Colombia., Trial Registration: number approval 007-2016 ethics committee-IIBT., Competing Interests: The study was approved by the ethics committee of the Tropical Biological Research Institute, and took into account technical, scientific, ethics and administrative standards for health research stipulated by the Ministry of Health of Colombia accordance with resolution No. 008430/1993 [33] and the international Ethics standards of Helsinki [34]. The purpose of the study was explained to the people who participated in a voluntary interview basis on the work done. Participants signed an informed consent and confidentiality was maintained at all the time.Not applicable.The authors declare that they have no competing interests.Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.
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- 2018
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42. Zika virus disease, microcephaly and Guillain-Barré syndrome in Colombia: epidemiological situation during 21 months of the Zika virus outbreak, 2015-2017.
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Méndez N, Oviedo-Pastrana M, Mattar S, Caicedo-Castro I, and Arrieta G
- Abstract
Background: The Zika virus disease (ZVD) has had a huge impact on public health in Colombia for the numbers of people affected and the presentation of Guillain-Barre syndrome (GBS) and microcephaly cases associated to ZVD., Methods: A retrospective descriptive study was carried out, we analyze the epidemiological situation of ZVD and its association with microcephaly and GBS during a 21-month period, from October 2015 to June 2017. The variables studied were: (i) ZVD cases, (ii) ZVD cases in pregnant women, (iii) laboratory-confirmed ZVD in pregnant women, (iv) ZVD cases associated with microcephaly, (v) laboratory-confirmed ZVD associated with microcephaly, and (vi) ZVD associated to GBS cases. Average number of cases, attack rates (AR) and proportions were also calculated. The studied variables were plotted by epidemiological weeks and months. The distribution of ZVD cases in Colombia was mapped across the time using Kernel density estimator and QGIS software; we adopted Kernel Ridge Regression (KRR) and the Gaussian Kernel to estimate the number of Guillain Barre cases given the number of ZVD cases., Results: One hundred eight thousand eighty-seven ZVD cases had been reported in Colombia, including 19,963 (18.5%) in pregnant women, 710 (0.66%) associated with microcephaly (AR, 4.87 cases per 10,000 live births) and 453 (0.42%) ZVD associated to GBS cases (AR, 41.9 GBS cases per 10,000 ZVD cases). It appears the cases of GBS increased in parallel with the cases of ZVD, cases of microcephaly appeared 5 months after recognition of the outbreak. The kernel density map shows that throughout the study period, the states most affected by the Zika outbreak in Colombia were mainly San Andrés and Providencia islands, Casanare, Norte de Santander, Arauca and Huila. The KRR shows that there is no proportional relationship between the number of GBS and ZVD cases. During the cross validation, the RMSE achieved for the second order polynomial kernel, the linear kernel, the sigmoid kernel, and the Gaussian kernel are 9.15, 9.2, 10.7, and 7.2 respectively., Conclusions: This study updates the epidemiological analysis of the ZVD situation in Colombia describes the geographical distribution of ZVD and shows the functional relationship between ZVD cases and GBS.
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- 2017
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43. Case report: microcephaly associated with Zika virus infection, Colombia.
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Mattar S, Ojeda C, Arboleda J, Arrieta G, Bosch I, Botia I, Alvis-Guzman N, Perez-Yepes C, Gerhke L, and Montero G
- Subjects
- Brazil, Cerebellum abnormalities, Cerebellum virology, Colombia, Developmental Disabilities virology, Female, Humans, Hydrocephalus virology, Infant, Newborn, Nervous System Malformations virology, Placenta virology, Pregnancy, Zika Virus pathogenicity, Microcephaly virology, Pregnancy Complications, Infectious virology, Zika Virus Infection etiology
- Abstract
Background: Recently there has been a large outbreak of Zika virus infections in Colombia, South America. The epidemic began in September 2015 and continued to April 2017, for the total number of Zika cases reported of 107,870. For those confirmed Zika cases, there were nearly 20,000 (18.5%) suspected to be pregnant women, resulting in 157 confirmed cases of microcephaly in newborns reported by their health government agency. There is a clear under-estimation of the total number of cases and in addition no prior publications have been published to demonstrate the clinical aspects of the Zika infection in Colombia. We characterized one Zika presentation to be able to compare and contrast with other cases of Zika infection already reported in the literature., Case Presentation: In this case report, we demonstrate congenital microcephaly at week 19 of gestation in a 34-year-old mother who showed symptoms compatible with Zika virus infection from Sincelejo, State of Sucre, in the Colombian Caribbean. Zika virus RNA was detected in the placenta using real-time reverse transcriptase polymerase chain reaction (RT-PCR). At week 25, the fetus weigh estimate was 770 g, had a cephalic perimeter of 20.2 cm (5th percentile), ventriculomegaly on the right side and dilatation of the fourth ventricle. At week 32, the microcephaly was confirmed with a cephalic perimeter of 22 cm, dilatation of the posterior atrium to 13 mm, an abnormally small cerebellum (29 mm), and an augmented cisterna magna. At birth (39 weeks by cesarean section), the head circumference was 27.5 cm, and computerized axial tomography (Siemens Corp, 32-slides) confirmed microcephaly with calcifications., Conclusion: We report a first case of maternal Zika virus infection associated with fetal microcephaly in Colombia and confirmed similar presentation to those observed previous in Brazil, 2015-2016.
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- 2017
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44. Characterization of three-dimensional cancer cell migration in mixed collagen-Matrigel scaffolds using microfluidics and image analysis.
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Anguiano M, Castilla C, Maška M, Ederra C, Peláez R, Morales X, Muñoz-Arrieta G, Mujika M, Kozubek M, Muñoz-Barrutia A, Rouzaut A, Arana S, Garcia-Aznar JM, and Ortiz-de-Solorzano C
- Subjects
- Cell Line, Tumor, Diffusion, Drug Combinations, Extracellular Matrix, Humans, Hydrogels, Mechanical Phenomena, Microscopy, Confocal, Neoplasm Metastasis, Phenotype, Spheroids, Cellular, Tumor Cells, Cultured, Tumor Microenvironment, Cell Movement, Collagen chemistry, Collagen ultrastructure, Laminin chemistry, Laminin ultrastructure, Microfluidics methods, Proteoglycans chemistry, Proteoglycans ultrastructure, Tissue Scaffolds chemistry
- Abstract
Microfluidic devices are becoming mainstream tools to recapitulate in vitro the behavior of cells and tissues. In this study, we use microfluidic devices filled with hydrogels of mixed collagen-Matrigel composition to study the migration of lung cancer cells under different cancer invasion microenvironments. We present the design of the microfluidic device, characterize the hydrogels morphologically and mechanically and use quantitative image analysis to measure the migration of H1299 lung adenocarcinoma cancer cells in different experimental conditions. Our results show the plasticity of lung cancer cell migration, which turns from mesenchymal in collagen only matrices, to lobopodial in collagen-Matrigel matrices that approximate the interface between a disrupted basement membrane and the underlying connective tissue. Our quantification of migration speed confirms a biphasic role of Matrigel. At low concentration, Matrigel facilitates migration, most probably by providing a supportive and growth factor retaining environment. At high concentration, Matrigel slows down migration, possibly due excessive attachment. Finally, we show that antibody-based integrin blockade promotes a change in migration phenotype from mesenchymal or lobopodial to amoeboid and analyze the effect of this change in migration dynamics, in regards to the structure of the matrix. In summary, we describe and characterize a robust microfluidic platform and a set of software tools that can be used to study lung cancer cell migration under different microenvironments and experimental conditions. This platform could be used in future studies, thus benefitting from the advantages introduced by microfluidic devices: precise control of the environment, excellent optical properties, parallelization for high throughput studies and efficient use of therapeutic drugs., Competing Interests: The authors have declared that no competing interests exist.
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- 2017
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45. Epidemic outbreak of Chikungunya in two neighboring towns in the Colombian Caribbean: a survival analysis.
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Oviedo-Pastrana M, Méndez N, Mattar S, Arrieta G, and Gomezcaceres L
- Abstract
Background: The first autochthonous Chikungunya virus transmission in Colombia was reported in September 2014. Three months later, every town in the Caribbean region was affected, including the bordering towns of Ovejas and Corozal, in the department of Sucre. The objective of the study was to analyze and compare the temporal dynamics of the outbreak of Chikungunya in two towns of the department of Sucre., Methods: Households with suspicious cases with clinical symptomatology for Chikungunya were enrolled. In each house an epidemiological questionnaire was applied to collect economic and social information and methods for vector control., Results: The study analyzed data collected between 09/01/2014 and 01/31/2015; 458 families in Corozal and 516 families in Ovejas were identified with Chikungunya cases. Estimated attack rates were 10,621 cases and 1640 cases per 100,000 inhabitants, in Ovejas and Corozal, respectively. The 75-day survival curve was 27.2% lower (0.632, CI = 0.614-0.651) in Ovejas than in Corozal (0.904, CI = 0.891-0.917). After 120 days, both curves showed a stable horizontal slope, close to a survival probability of 0.54, indicating the end of the epidemic period. The log-rank test ( X
2 = 94.6, 1fd, p -value = 0.000) showed the improved survival of Chikungunya in the town of Corozal. The relative risk between the two towns was 0.863 (CI = 0.809-0.921; p -value < 0.001)., Conclusions: The dynamics of the temporal distribution of CHIKV could be influenced by socioeconomic and preventable risk factors. Poor socioeconomic conditions such as the lack and poor efficiency of water supply and waste collection services could be determining factors in the proliferation of CHIKV. The survival analysis proved to be a suitable method for studying the presentation of CHIKV and can be applied to other prevalent vector-borne diseases such as the ZIKA and Dengue.- Published
- 2017
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46. Fracture Resistance of Monolithic High Translucency Zirconia Implant-Supported Crowns.
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Brizuela-Velasco A, Diéguez-Pereira M, Álvarez-Arenal Á, Chávarri-Prado D, Solaberrieta E, Fernández-González FJ, Chento-Valiente Y, and Santamaría-Arrieta G
- Subjects
- Ceramics, Dental Stress Analysis, Humans, Zirconium, Crowns standards, Dental Prosthesis, Implant-Supported adverse effects, Dental Prosthesis, Implant-Supported standards, Dental Restoration Failure
- Abstract
Aim: To evaluate the resistance to axial forces of screw-retained monolithic high translucency zirconia (mHTZr) crowns compared with high translucency zirconia + feldspathic ceramic (HTZrC) crowns, low translucency zirconia + feldspathic ceramic (LTZrC) crowns, and metal-ceramic (MC) crowns, and also to observe the different fracture patterns between all groups., Methods: Twenty-four crowns were fabricated (6 of each group) and loaded until failure, using a testing machine with a 5.0-kN load cell., Results: Mean fracture results varied between 1092.7 N (LTZrC group) and 3439.7 N (mHTZr group). No statistically significant differences were found between the HTZrC, LTZrC, and MC groups. However, statistically significant differences (P < 0.05) were found between mHTZr and the other 3 groups. In the MC group, only chipping of the ceramic veneering occurred. In the mHTZr group, when fracturing occurred, it was of the whole structure. Finally, the LTZrC and HTZrC groups suffered both chipping and core fractures., Conclusion: High translucency monolithic zirconia implant-supported crowns proved to be the toughest group studied when an axial force was applied. Fracture patterns varied between different materials, chipping being the most common occurrence.
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- 2016
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47. Menstrual cycle phase at the time of rape does not affect recovery of semen or amplification of STR profiles of a suspect in vaginal swabs.
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Cerdas L, Herrera F, Arrieta G, Morelli C, Álvarez K, and Gómez A
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- Adolescent, Adult, Child, Female, Forensic Medicine methods, Humans, Male, Middle Aged, Polymerase Chain Reaction, Young Adult, DNA Fingerprinting methods, Menstrual Cycle, Microsatellite Repeats genetics, Rape, Semen, Vaginal Smears
- Abstract
The effect of women menstrual cycle on the forensic analysis of rapes was studied in a random group of 170 victims aged among 10 and 51 years. Participants were grouped according to the day of the menstrual cycle in which they were at the moment of the assault. From each participant, samples of vaginal fluid were taken and analyzed for sperm cells, p30 protein, total human DNA and human male DNA. Moreover, amplification of suspect's autosomal STR and Y-STR was attempted. Suspects' autosomal STR profiles were obtained from 92 of the 101 samples in which spermatozoa were found; and Y-STR haplotype was obtained in 1 of the 9 samples where autosomal STR profiles of a male were not obtained. On the other hand, Y-STR haplotypes were obtained in 2 of the 21 samples negative for sperm cells but positive for p30 protein. Y-STR haplotypes were also obtained in 11 of the 48 samples negative for sperm cells and p30 protein. It was found that groups of participants did not differ on the recovery of sperm cells from the vaginal swabs, quantification of suspect's DNA or amplification of their STR profiles. It is concluded that the menstrual cycle phase at the moment of the sexual assault does not affect the main outcomes of the forensic investigation of rapes., (Copyright © 2015 Elsevier Ireland Ltd. All rights reserved.)
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- 2016
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48. Outbreak of Chikungunya virus in the north Caribbean area of Colombia: clinical presentation and phylogenetic analysis.
- Author
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Mattar S, Miranda J, Pinzon H, Tique V, Bolanos A, Aponte J, Arrieta G, Gonzalez M, Barrios K, Contreras H, Alvarez J, and Aleman A
- Subjects
- Adolescent, Adult, Aged, Aged, 80 and over, Antibodies, Viral blood, Caribbean Region epidemiology, Chikungunya virus genetics, Child, Colombia epidemiology, Enzyme-Linked Immunosorbent Assay, Female, Humans, Immunoglobulin G blood, Immunoglobulin M blood, Male, Middle Aged, Phylogeny, Reverse Transcriptase Polymerase Chain Reaction, Sequence Analysis, DNA, Sequence Homology, Young Adult, Chikungunya Fever epidemiology, Chikungunya Fever pathology, Chikungunya virus classification, Chikungunya virus isolation & purification, Disease Outbreaks
- Abstract
Introduction: The Caribbean area of Colombia has been severely affected by a Chikungunya virus (CHIKV) outbreak since 2014., Methodology: The study was carried out on 100 patients during a fever outbreak from August to September 2014 in two small rural villages in the northern Caribbean area of Colombia. The molecular assays performed by reverse transcription polymerase chain reaction (RT-PCR) on acute patient sera were collected within one to five days of the appearance of symptoms. Sequence analyses were carried out based on phylogenetic analyses of genes NS1 and E2. For serological assays, 49 (49%) patients at ≥ 6 days of disease onset were tested with NovaLisa Chikungunya IgG/IgM µ-capture enzyme-linked immunosorbent assay (ELISA)., Results: The main signs or symptoms associated with Chikungunya infection were arthralgia of the lower limbs (96%), fever (91%), arthralgia of the upper limbs (85%), rash (64%), and headache (57%). Ninety-four percent (46/49) of patients were positive for either IgM or IgG; the remaining three (6%) patients were seronegative. Viral loads were detected in 25 patients. Based on phylogenetic analysis of NS1 and E2, the characterization of the Colombian CHIKV indicated that it was a strain closely related to the British Virgin Islands strain and to the Asian genotype., Conclusions: This study shows the phylogenetic and clinical description of CHIKV in Colombia. The main symptoms shown were: arthralgia, fever, and rash. CHIKV sequences detected in Colombian patients were within the Asian genotype and closely related to the British Virgin Islands strain.
- Published
- 2015
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49. Influence of Articulating Paper Thickness on Occlusal Contacts Registration: A Preliminary Report.
- Author
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Brizuela-Velasco A, Álvarez-Arenal Á, Ellakuria-Echevarria J, del Río-Highsmith J, Santamaría-Arrieta G, and Martín-Blanco N
- Subjects
- Humans, Occlusal Adjustment, Paper
- Abstract
The objective of this preliminary study was to determine if the occlusal contact surface registered with an articulating paper during fixed prosthodontic treatment was contained within the area marked on a thicker articulating paper. This information would optimize any necessary occlusal adjustment of a prosthesis' veneering material. A convenience sample of 15 patients who were being treated with an implant-supported fixed singleunit dental prosthesis was selected. Occlusal registrations were obtained from each patient using 12-μm, 40-μm, 80-μm, and 200-μm articulating paper. Photographs of the occlusal registrations were obtained, and pixel measurements of the surfaces were taken and overlapped for comparison. The results showed that the thicker the articulating paper, the larger the occlusal contact area obtained. The differences were statistically significant. In all cases, the occlusal registrations obtained with the thinnest articulating paper were contained within the area marked on the thickest articulating paper. The results suggested that the use of thin articulating papers (12-μm or 40-μm) can avoid unnecessary grinding of veneering material or teeth during occlusal adjustment.
- Published
- 2015
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50. Leptospirosis in pigs, dogs, rodents, humans, and water in an area of the Colombian tropics.
- Author
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Calderón A, Rodríguez V, Máttar S, and Arrieta G
- Subjects
- Animals, Colombia epidemiology, Dog Diseases epidemiology, Dog Diseases microbiology, Dogs, Humans, Leptospira interrogans classification, Leptospirosis microbiology, Rodent Diseases epidemiology, Rodent Diseases microbiology, Rodentia, Seroepidemiologic Studies, Sus scrofa immunology, Swine, Swine Diseases epidemiology, Swine Diseases microbiology, Zoonoses, Leptospira interrogans isolation & purification, Leptospirosis veterinary, Water Microbiology
- Abstract
Leptospirosis is a reemerging zoonosis of global distribution and is one of the causes of hemorrhagic fevers in the tropics. We sought to determine seroprevalence in humans and animals and isolate Leptospira interrogans sensu lato in domestic animals, rodents, and water sources. The study was conducted in a tropical area of the middle Sinú in Cordoba, Colombia. In a prospective descriptive study, we collected blood and urine from pigs and dogs, sera from rural human workers, sera and kidney macerates of rodents, and water samples from environmental sources. We used microagglutination to screen for antibodies to 13 serovars. Strains were cultured on the Ellinghausen-McCullough-Johnson-Harris medium and confirmed by PCR amplifying lipL32 gene. Seroprevalence was 55.9% in pigs, 35.2% in dogs, and 75.8% in humans; no antibody was detected, and no Leptospira were isolated from kidney macerates of rodents. Seven L. interrogans sensu lato strains were isolated: three from pigs, two from dogs, and two from water. High seroprevalence in pigs, dogs, and humans, concomitant to isolation of strains, demonstrates that in Cordoba, transmission exists among animals, the environment, and humans, which warrants the implementation of public health intervention measures to reduce the epidemiological impact of leptospirosis in the region.
- Published
- 2014
- Full Text
- View/download PDF
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