279 results on '"Atsuko Sato"'
Search Results
2. A case of immunoglobulin A vasculitis presenting with annular erythema
- Author
-
Shuhei Kobayashi, Koji Kamiya, Shoka Fukuizumi, Soichiro Kado, Hirofumi Okada, Atsuko Sato, and Mayumi Komine
- Subjects
adult-onset ,annular erythema ,annular IgA vasculitis ,IgA vasculitis ,palpable purpura ,Dermatology ,RL1-803 ,Immunologic diseases. Allergy ,RC581-607 - Published
- 2024
- Full Text
- View/download PDF
3. Heterogeneity in maternal mRNAs within clutches of eggs in response to thermal stress during the embryonic stage
- Author
-
Atsuko Sato, Yukie Mihirogi, Christine Wood, Yutaka Suzuki, Manuela Truebano, and John Bishop
- Subjects
Sibling species ,Hybrid ,Heat stress ,Variation ,Bet-hedging ,Single-egg sequencing ,Ecology ,QH540-549.5 ,Evolution ,QH359-425 - Abstract
Abstract Background The origin of variation is of central interest in evolutionary biology. Maternal mRNAs govern early embryogenesis in many animal species, and we investigated the possibility that heterogeneity in maternal mRNA provisioning of eggs can be modulated by environmental stimuli. Results We employed two sibling species of the ascidian Ciona, called here types A and B, that are adapted to different temperature regimes and can be hybridized. Previous study showed that hybrids using type B eggs had higher susceptibility to thermal stress than hybrids using type A eggs. We conducted transcriptome analyses of multiple single eggs from crosses using eggs of the different species to compare the effects of maternal thermal stress on heterogeneity in egg provisioning, and followed the effects across generations. We found overall decreases of heterogeneity of egg maternal mRNAs associated with maternal thermal stress. When the eggs produced by the F1 AB generation were crossed with type B sperm and the progeny (‘ABB’ generation) reared unstressed until maturation, the overall heterogeneity of the eggs produced was greater in a clutch from an individual with a heat-stressed mother compared to one from a non-heat-stressed mother. By examining individual genes, we found no consistent overall effect of thermal stress on heterogeneity of expression in genes involved in developmental buffering. In contrast, heterogeneity of expression in signaling molecules was directly affected by thermal stress. Conclusions Due to the absence of batch replicates and variation in the number of reads obtained, our conclusions are very limited. However, contrary to the predictions of bet-hedging, the results suggest that maternal thermal stress at the embryo stage is associated with reduced heterogeneity of maternal mRNA provision in the eggs subsequently produced by the stressed individual, but there is then a large increase in heterogeneity in eggs of the next generation, although itself unstressed. Despite its limitations, our study presents a proof of concept, identifying a model system, experimental approach and analytical techniques capable of providing a significant advance in understanding the impact of maternal environment on developmental heterogeneity.
- Published
- 2024
- Full Text
- View/download PDF
4. Scrotal epidermoid cysts penetrating the penile corpora cavernosa: Two case reports
- Author
-
Hiroshi Shimura, Atsuko Sato, Satoru Kira, Norifumi Sawada, Hiroyuki Satoh, and Takahiko Mitsui
- Subjects
epidermoid cyst ,intrascrotal tumor ,pediatric tumor ,penile corpora cavernosa ,tumor resection ,Diseases of the genitourinary system. Urology ,RC870-923 - Abstract
Introduction Epidermoid cysts are tumors and that rarely occur in intrascrotal extratesticular tissues. It is extremely rare for the tumors to penetrate the penile corpora cavernosa. Case presentation We encountered a 4‐year‐old and a 6‐year‐old boy with intrascrotal tumors that penetrated the penile corpora cavernosa. Both the patients underwent tumor resection. In the former case, some of the tumor within the corpora cavernosa was left behind, while in the latter case, the tumor was completely resected. Pathological examination in both cases confirmed the diagnosis of epidermoid cysts. Conclusion We should consider the possibility of epidermoid cysts in children presenting with intrascrotal tumors. Moreover, care should be taken when handling the corpora cavernosa during surgery.
- Published
- 2024
- Full Text
- View/download PDF
5. Possible role of the collagen type I alpha 1–platelet‐derived growth factor beta chain fusion gene in the development of dermatofibrosarcoma protuberans with fibrosarcomatous transformation
- Author
-
Fuminori Katsumata, Koji Kamiya, Hitomi Miyauchi, Hirofumi Okada, Atsuko Sato, Takeo Maekawa, Mayumi Komine, and Mamitaro Ohtsuki
- Subjects
collagen type I alpha 1–platelet‐derived growth factor beta chain fusion gene ,dermatofibrosarcoma protuberans ,dermatofibrosarcoma protuberans with fibrosarcomatous transformation ,Dermatology ,RL1-803 ,Immunologic diseases. Allergy ,RC581-607 - Abstract
Abstract Dermatofibrosarcoma protuberans with fibrosarcomatous transformation (DFSP‐FS) is a rare variant, with higher rates of recurrence and metastasis than DFSP. Detection of the collagen type I alpha 1 (COL1A1)–platelet‐derived growth factor beta chain (PDGFB) fusion gene is useful for the diagnosis of DFSP. In this letter, we report a case of DFSP‐FS, focusing on the expression of the COL1A1‐PDGFB fusion gene in the lesions. Increased expression of the COL1A1‐PDGFB fusion gene may be associated with fibrosarcomatous changes during the pathogenesis of DFSP.
- Published
- 2023
- Full Text
- View/download PDF
6. A case of Kyrle's disease successfully treated with topical benzoyl peroxide
- Author
-
Daiki Karube, Koji Kamiya, Atsuko Sato, Takeo Maekawa, Shin Kabasawa, Mayumi Komine, and Mamitaro Ohtsuki
- Subjects
Dermatology ,RL1-803 ,Immunologic diseases. Allergy ,RC581-607 - Published
- 2023
- Full Text
- View/download PDF
7. Co-expression network analysis of environmental canalization in the ascidian Ciona
- Author
-
Atsuko Sato, Gina M. Oba, Nathanael Aubert-Kato, Kei Yura, and John Bishop
- Subjects
Developmental buffering ,Ascidians ,Reciprocal cross ,Maternal RNA ,Co-expression analysis ,Ecology ,QH540-549.5 ,Evolution ,QH359-425 - Abstract
Abstract Background Canalization, or buffering, is defined as developmental stability in the face of genetic and/or environmental perturbations. Understanding how canalization works is important in predicting how species survive environmental change, as well as deciphering how development can be altered in the evolutionary process. However, how developmental gene expression is linked to buffering remains unclear. We addressed this by co-expression network analysis, comparing gene expression changes caused by heat stress during development at a whole-embryonic scale in reciprocal hybrid crosses of sibling species of the ascidian Ciona that are adapted to different thermal environments. Results Since our previous work showed that developmental buffering in this group is maternally inherited, we first identified maternal developmental buffering genes (MDBGs) in which the expression level in embryos is both correlated to the level of environmental canalization and also differentially expressed depending on the species’ gender roles in hybrid crosses. We found only 15 MDBGs, all of which showed high correlation coefficient values for expression with a large number of other genes, and 14 of these belonged to a single co-expression module. We then calculated correlation coefficients of expression between MDBGs and transcription factors in the central nervous system (CNS) developmental gene network that had previously been identified experimentally. We found that, compared to the correlation coefficients between MDBGs, which had an average of 0.96, the MDBGs are loosely linked to the CNS developmental genes (average correlation coefficient 0.45). Further, we investigated the correlation of each developmental to MDBGs, showing that only four out of 62 CNS developmental genes showed correlation coefficient > 0.9, comparable to the values between MDBGs, and three of these four genes were signaling molecules: BMP2/4, Wnt7, and Delta-like. Conclusions We show that the developmental pathway is not centrally located within the buffering network. We found that out of 62 genes in the developmental gene network, only four genes showed correlation coefficients as high as between MDBGs. We propose that loose links to MDBGs stabilize spatiotemporally dynamic development.
- Published
- 2022
- Full Text
- View/download PDF
8. Aberrant Water Structure Dynamics in B16 Melanoma-Bearing Mice by Time Domain Refractometry Analysis
- Author
-
Kahori Furuhata, Haruchika Masuda, Atsuko Sato, Kumiko Miyata, Naoki Shinyashiki, Rio Kita, Kotaro Imagawa, Tadashi Akamatsu, and Shin Yagihara
- Subjects
water structure dynamics ,time domain reflectometry ,tumor ,Biology (General) ,QH301-705.5 - Abstract
Living bodies comprise approximately 55–75% water to maintain homeostasis. However, little is known about the comprehensive differences in in vivo water molecule dynamics (water structure dynamics; WSD) between physiological and pathophysiological statuses. Here, we examined the WSD of ex vivo tumor tissues and organs from tumor-bearing mice with engrafted mouse malignant melanoma cells (B16-F10) in the right flanks to compare with those in healthy mice, using time domain reflectometry of dielectric spectroscopy at days 9, 11, and 14 after engrafting. The relaxation parameters of relaxation time (τ), relaxation time distribution parameter (β), and relaxation strength (∆ε) were measured on tumor tissues and lung, liver, kidney, and skin tissues. Immediately afterward, the water contents (%) in the tumor and the other organs were calculated by measuring their weights before and after freeze-drying. Each parameter of the tumor was compared to that of pooled values of other organs in tumor-bearing (TO) and healthy mice (HO). The tumor water content temporarily increased compared to that of HO at day 11; the tumor volume was also prone to increase. In contrast, tumor tissues exhibited significantly higher values of β close to 1 of ultrapure water and ∆ε compared to TO and HO at all times. Moreover, β in the viscera of TO was prone to increase compared to that of HO with significantly higher levels at day 11. Conclusively, tumor-bearing mice exhibited systemically aberrant WSD, unlike healthy mice. Thus, dielectric spectroscopy in terms of WSD may provide novel pathophysiological perspectives in tumor-bearing living bodies.
- Published
- 2023
- Full Text
- View/download PDF
9. Structure-guided screening strategy combining surface plasmon resonance with nuclear magnetic resonance for identification of small-molecule Argonaute 2 inhibitors.
- Author
-
Toshimasa Harumoto, Atsuko Sato, Yuki Takayama, Hikaru Miyagi, Jun-Ichi Saito, and Fumikazu Shinohara
- Subjects
Medicine ,Science - Abstract
Argonaute (AGO) proteins are the key component of the RNA interference machinery that suppresses gene expression by forming an RNA-induced silencing complex (RISC) with microRNAs (miRNAs). Each miRNA is involved in various cellular processes, such as development, differentiation, tumorigenesis, and viral infection. Thus, molecules that regulate miRNA function are expected to have therapeutic potential. In addition, the biogenesis of miRNA is a multistep process involving various proteins, although the complete pathway remains to be elucidated. Therefore, identification of molecules that can specifically modulate each step will help understand the mechanism of gene suppression. To date, several AGO2 inhibitors have been identified. However, these molecules were identified through a single screening method, and no studies have specifically evaluated a combinatorial strategy. Here, we demonstrated a combinatorial screening (SCR) approach comprising an in silico molecular docking study, surface plasmon resonance (SPR) analysis, and nuclear magnetic resonance (NMR) analysis, focusing on the strong binding between the 5'-terminal phosphate of RNA and the AGO2 middle (MID) domain. By combining SPR and NMR, we identified binding modes of amino acid residues binding to AGO2. First, using a large chemical library (over 6,000,000 compounds), 171 compounds with acidic functional groups were screened using in silico SCR. Next, we constructed an SPR inhibition system that could analyze only the 5'-terminal binding site of RNA, and nine molecules that strongly bound to the AGO2 MID domain were selected. Finally, using NMR, three molecules that bound to the desired site were identified. The RISC inhibitory ability of the "hit" compounds was analyzed in human cell lysate, and all three hit compounds strongly inhibited the binding between double-stranded RNA and AGO2.
- Published
- 2020
- Full Text
- View/download PDF
10. Fabry disease in a Japanese population-molecular and biochemical characteristics
- Author
-
Hitoshi Sakuraba, Takahiro Tsukimura, Tadayasu Togawa, Toshie Tanaka, Tomoko Ohtsuka, Atsuko Sato, Tomoko Shiga, Seiji Saito, and Kazuki Ohno
- Subjects
Medicine (General) ,R5-920 ,Biology (General) ,QH301-705.5 - Abstract
We had experienced 117 Japanese Fabry patients (72 males and 45 females) from 1977 to 2006, and then we generated an improved Fabry analysis system in 2007 and have found 196 ones (95 males and 101 females) since then. In this study, we summarized the data of the patients and tried to elucidate the molecular and biochemical characteristics of Japanese Fabry patients. Gene analysis revealed various GLA mutations, including missense mutations (56.5%, 48 types); nonsense mutations (15.9%, 13 types); deletions (12.6%, 13 types); splicing defects (10.1%, 6 types); insertions (1.0%, 2 types), and insertions/deletions (0.5%, 1 type), in the patients that were tested. Amino acid substitutions resulting from the missense mutations found in the classic form patients tended to be localized in the core of the GLA protein, and those in the later-onset ones in the peripheral region. The most commonly identified pathogenic mutations are c.888G > A (p.M296I), c.936 + 919G > A, c.679C > T (p.R227X), c.335G > A (p.R112H), c.334C > T (p.R112C), and c.902G > A (p.R301Q). Among them, c.888G > A (p.M296I) is unique to Japanese Fabry patients. On the other hand, c.936 + 919G > A is a variant that has been frequently detected in Taiwan Chinese Fabry patients, and c.335G > A (p.R112H) in various countries. These are found in later-onset patients, and c.679C > T (p.R227X) and c.334C > T (p.R112C) classic ones. c.902G > A (p.R301Q) is found in both classic and later-onset form patients. A possible functional polymorphism, c.196G > C (p.E66Q), was identified in 0.4% of the subjects who underwent high-risk screening. The biochemical findings including leukocyte α-galactosidase A activity, plasma globotriaosylsphingosine level and urinary globotriaosylceramide in the individual phenotypic groups well reflected the phenotypic differences in this disease. The results will be useful for understanding the basis of Fabry disease in Japan. Keywords: Fabry disease, α-Galactosidase A, Globotriaosylceramide, Globotriaosylsphingosine, Gene mutation
- Published
- 2018
- Full Text
- View/download PDF
11. Dipeptidyl dipeptidase-4 inhibitor recovered ischemia through an increase in vasculogenic endothelial progenitor cells and regeneration-associated cells in diet-induced obese mice.
- Author
-
Amankeldi A Salybekov, Haruchika Masuda, Kozo Miyazaki, Yin Sheng, Atsuko Sato, Tomoko Shizuno, Yumi Iida, Yoshinori Okada, and Takayuki Asahara
- Subjects
Medicine ,Science - Abstract
Metabolic syndrome (MS), overlapping type 2 diabetes, hyperlipidemia, and/or hypertension, owing to high-fat diet, poses risk for cardiovascular disease. A critical feature associated with such risk is the functional impairment of endothelial progenitor cells (EPCs). Dipeptidyl dipeptidase-4 inhibitors (DPP-4 i) not only inhibit degradation of incretins to control blood glucose levels, but also improve EPC bioactivity and induce anti-inflammatory effects in tissues. In the present study, we investigated the effects of such an inhibitor, MK-06266, in an ischemia model of MS using diet-induced obese (DIO) mice. EPC bioactivity was examined in MK-0626-administered DIO mice and a non-treated control group, using an EPC colony-forming assay and bone marrow cKit+ Sca-1+ lineage-cells, and peripheral blood-mononuclear cells. Our results showed that, in vitro, the effect of MK-0626 treatment on EPC bioactivities and differentiation was superior compared to the control. Furthermore, microvascular density and pericyte-recruited arteriole number increased in MK-0626-administered mice, but not in the control group. Lineage profiling of isolated cells from ischemic tissues revealed that MK-0626 administration has an inhibitory effect on unproductive inflammation. This occurred via a decrease in the influx of total blood cells and pro-inflammatory cells such as neutrophils, total macrophages, M1, total T-cells, cytotoxic T-cells, and B-cells, with a concomitant increase in number of regeneration-associated cells, such as M2/M ratio and Treg/T-helper. Laser Doppler analysis revealed that at day 14 after ischemic injury, blood perfusion in hindlimb was greater in MK-0626-treated DIO mice, but not in control. In conclusion, the DPP-4 i had a positive effect on EPC differentiation in MS model of DIO mice. Following ischemic injury, DPP-4 i sharply reduced recruitment of pro-inflammatory cells into ischemic tissue and triggered regeneration and reparation, making it a promising therapeutic agent for MS treatment.
- Published
- 2019
- Full Text
- View/download PDF
12. Batroxobin accelerated tissue repair via neutrophil extracellular trap regulation and defibrinogenation in a murine ischemic hindlimb model.
- Author
-
Haruchika Masuda, Atsuko Sato, Tomoko Shizuno, Keiko Yokoyama, Yusuke Suzuki, Masayoshi Tokunaga, and Takayuki Asahara
- Subjects
Medicine ,Science - Abstract
Batroxobin, isolated from Bothrops moojeni, is a defibrinogenating agent used as a thrombin-like serine protease against fibrinogen for improving microcirculation. Here, we investigated whether, and if so, how batroxobin restores ischemic tissue injury in terms of anti-inflammatory effects. In an in vitro flow cytometry assay for human neutrophil extracellular traps (NETs), batroxobin (DF-521; Defibrase) inhibited human NETs induced by tumor necrosis factor-α (TNF-α) in the presence of human fibrinogen. Next, the effect of batroxobin was investigated by immunohistochemistry of the anterior tibial muscle (ATM) in an ischemic hindlimb model using C57BL/6J mice intraperitoneally injected with DF-521 versus the saline control. NETs and fibrinogen deposition in the ischemic ATM decreased in DF-521-treated mice on day 2 after ischemia. Meanwhile, reverse transcription-quantitative PCR assay of the ischemic ATM unveiled continuous downregulation in the expression of the genes; Tnf-α and nitric oxide synthase2 (Nos2) with hypoxia-inducible factor-1α (Hif-1α) and vascular endothelial growth factor-a (Vegf-a) from day 3 to day 7, but the upregulation of arginase-1 (Arg-1) and placental growth factor (Plgf) with myogenin (Myog) on day 7. Daily intraperitoneal DF-521 injection for the initial 7 days into mice with ischemic hindlimbs promoted angiogenesis and arteriogenesis on day 14. Moreover, DF-521 injection accelerated myofiber maturation after day 14. Laser doppler imaging analysis revealed that blood perfusion in DF-521-injected mice significantly improved on day 14 versus the saline control. Thus, DF-521 improves microcirculation by protecting NETs with tissue defibrinogenation, thereby protecting against severe ischemic tissue injury and accelerating vascular and skeletal muscular regeneration. To our knowledge, batroxobin might be the first clinically applicable NET inhibitor against ischemic diseases.
- Published
- 2019
- Full Text
- View/download PDF
13. Drinking Molecular Hydrogen Water Is Beneficial to Cardiovascular Function in Diet-Induced Obesity Mice
- Author
-
Haruchika Masuda, Atsuko Sato, Kumiko Miyata, Tomoko Shizuno, Akira Oyamada, Kazuo Ishiwata, Yoshihiro Nakagawa, and Takayuki Asahara
- Subjects
obesity ,molecular hydrogen ,brown adipose tissue ,white adipose tissue ,cardiovascular disorders ,metabolic syndrome ,Biology (General) ,QH301-705.5 - Abstract
Molecular hydrogen (MH) reportedly exerts therapeutic effects against inflammatory diseases as a suppressor of free radical chain reactions. Here, the cardiovascular protective effects of the intake of molecular hydrogen water (MHW) were investigated using high-fat diet-induced obesity (DIO) mice. MHW was prepared using supplier sticks and degassed water as control. MHW intake for 2 weeks did not improve blood sugar or body weight but decreased heart weight in DIO mice. Moreover, MHW intake improved cardiac hypertrophy, shortened the width of cardiomyocytes, dilated the capillaries and arterioles, activated myocardial eNOS-Ser-1177 phosphorylation, and restored left ventricular function in DIO mice. MHW intake promoted the histological conversion of hypertrophy to hyperplasia in white and brown adipose tissues (WAT and BAT) with the upregulation of thermogenic and cardiovascular protective genes in BAT (i.e., Ucp-1, Vegf-a, and eNos). Furthermore, the results of a colony formation assay of bone-marrow-derived endothelial progenitor cells (EPCs) indicated that MHW activated the expansion, differentiation, and mobilization of EPCs to maintain vascular homeostasis. These findings indicate that the intake of MHW exerts cardiovascular protective effects in DIO mice. Hence, drinking MHW is a potential prophylactic strategy against cardiovascular disorders in metabolic syndrome.
- Published
- 2021
- Full Text
- View/download PDF
14. Retinal Angiomatous Proliferation in an Eye with Cuticular Drusen
- Author
-
Atsuko Sato, Nami Senda, Emi Fukui, and Kouichi Ohta
- Subjects
Retinal angiomatous proliferation ,Spectral domain optical coherence tomography ,Cuticular drusen ,Basal laminar drusen ,Ophthalmology ,RE1-994 - Abstract
Purpose: To report the presence of retinal angiomatous proliferation (RAP) in an eye with cuticular drusen detected by fluorescein and indocyanine green angiography by confocal scanning laser ophthalmoscopy and by spectral-domain optical coherence tomography (SD-OCT). Methods: Case report of a 65-year-old Japanese woman with cuticular drusen. Results: At her first ophthalmic examination, her visual acuity was 20/20 in both eyes. An ophthalmoscopy showed many small subretinal pigment epithelial deposits in both eyes. These deposits had a ‘saw-tooth pattern' in the SD-OCT images. During the follow-up examination, retinal hemorrhages were observed, and fluorescein angiography showed a ‘stars-in-the-sky' appearance and intraretinal neovascularization. The patient was diagnosed with cuticular drusen associated with RAP. Conclusion: We suggest that the cuticular drusen were associated with RAP, so periodic follow-up examinations are needed for patients with cuticular drusen for the early detection and treatment of RAP.
- Published
- 2015
- Full Text
- View/download PDF
15. Transient Increase of Retinal Nerve Fiber Layer Thickness after Vitrectomy with ILM Peeling for Idiopathic Macular Hole
- Author
-
Kouichi Ohta, Atsuko Sato, Nami Senda, and Emi Fukui
- Subjects
Ophthalmology ,RE1-994 - Abstract
Purpose. The purpose of this study was to determine the long-term changes in the circumpapillary retinal nerve fiber layer (RNFL) thickness following macular hole surgery with internal limiting membrane (ILM) peeling combined with phacoemulsification. Methods. Thirty-eight eyes of 37 patients who had pars plana vitrectomy (n=36) between 2010 and 2014 were studied. The average thicknesses of the global and the six sectors of the RNFL were determined before and at 1, 3, 6, 12, and 24 (n=22) months (M) after the surgery by spectral-domain optical coherent tomography. The postoperative mean RNFL thickness at each time was compared to that before the surgery by paired t-tests. Results. The RNFL of the operated eyes was significantly thicker at 1 month (1 M) and 3 M in all but the inferior-nasal sectors. The significant increase remained until 12 M in the superior-temporal and superior-nasal sectors. In addition, the RNFL was also significantly thicker in the temporal-inferior sector at 12 M based on the findings in 38 eyes. Conclusions. The postoperative RNFL was thicker in all but the nasal-inferior sector for at least 12 M after surgery. This prolonged increase of the RNFL thickness may indicate damage and mild edema of the RNFL.
- Published
- 2016
- Full Text
- View/download PDF
16. Spectral domain optical coherence tomographic findings at convalescent stage of acute zonal occult outer retinopathy
- Author
-
Kouichi Ohta and Atsuko Sato Emi Fukui
- Subjects
Ophthalmology ,RE1-994 - Abstract
Kouichi Ohta, Atsuko Sato Emi FukuiDepartment of Ophthalmology, Matsumoto Dental University, Shiojiri, Nagano, JapanPurpose: To describe the morphology of the retina at the convalescent stage of acute zonal occult outer retinopathy (AZOOR) from images obtained by spectral domain optical coherence tomography (SD-OCT).Methods: The visual fields, electroretinograms (ERGs), and OCT images were reviewed in two women aged 24 and 33 years. The patients were followed for one and four years, respectively.Results: In both cases, the anterior and posterior segments were almost normal, although both patients had a sudden unilateral vision decrease and photopsia. Goldmann perimetry revealed enlarged blind spots and scotomas. The ERGs were reduced in both cases. SD-OCT showed that the junction of the inner and outer segment, the IS/OS line, of the photoreceptors was irregular or lost in the affected retinas. The retina in these areas was thinner due to a decrease in the thickness of both the outer nuclear layer (ONL) and inner nuclear layer (INL) in Case 2. Conclusions: The decrease in retinal thickness at the convalescent stage of AZOOR is most likely due to a shortening of not only the photoreceptors and ONL but also to a thinning of the INL in a severe case.Keywords: AZOOR, SD-OCT, IS/OS, ONL
- Published
- 2009
17. Morphological Differences between Larvae of the Ciona intestinalis Species Complex: Hints for a Valid Taxonomic Definition of Distinct Species.
- Author
-
Roberta Pennati, Gentile Francesco Ficetola, Riccardo Brunetti, Federico Caicci, Fabio Gasparini, Francesca Griggio, Atsuko Sato, Thomas Stach, Sabrina Kaul-Strehlow, Carmela Gissi, and Lucia Manni
- Subjects
Medicine ,Science - Abstract
The cosmopolitan ascidian Ciona intestinalis is the most common model species of Tunicata, the sister-group of Vertebrata, and widely used in developmental biology, genomics and evolutionary studies. Recently, molecular studies suggested the presence of cryptic species hidden within the C. intestinalis species, namely C. intestinalis type A and type B. So far, no substantial morphological differences have been identified between individuals belonging to the two types. Here we present morphometric, immunohistochemical, and histological analyses, as well as 3-D reconstructions, of late larvae obtained by cross-fertilization experiments of molecularly determined type A and type B adults, sampled in different seasons and in four different localities. Our data point to quantitative and qualitative differences in the trunk shape of larvae belonging to the two types. In particular, type B larvae exhibit a longer pre-oral lobe, longer and relatively narrower total body length, and a shorter ocellus-tail distance than type A larvae. All these differences were found to be statistically significant in a Discriminant Analysis. Depending on the number of analyzed parameters, the obtained discriminant function was able to correctly classify > 93% of the larvae, with the remaining misclassified larvae attributable to the existence of intra-type seasonal variability. No larval differences were observed at the level of histology and immunohistochemical localization of peripheral sensory neurons. We conclude that type A and type B are two distinct species that can be distinguished on the basis of larval morphology and molecular data. Since the identified larval differences appear to be valid diagnostic characters, we suggest to raise both types to the rank of species and to assign them distinct names.
- Published
- 2015
- Full Text
- View/download PDF
18. A multiscale computational framework for the development of spines in molluscan shells.
- Author
-
Derek E. Moulton, Nathanaël Aubert-Kato, Axel A. Almet, and Atsuko Sato
- Published
- 2024
- Full Text
- View/download PDF
19. A propensity score-matched comparison between Mako robotic arm-assisted system and conventional technique in total hip arthroplasty for patients with osteoarthritis secondary to developmental dysplasia of the hip
- Author
-
Kei Sato, Atsuko Sato, Naoki Okuda, Matsubara Masaaki, and Hideyuki Koga
- Subjects
Orthopedics and Sports Medicine ,Surgery ,General Medicine - Abstract
The clinical effectiveness of robotic arm-assisted systems remains unclear for total hip arthroplasty (THA) in patients suffering from osteoarthritis secondary to developmental dysplasia of the hip (DDH).Patients with DDH who underwent primary THA were included in this study. We conducted a propensity score-matched comparison between THAs using a robotic arm-assisted system (Mako group) versus those using the manual procedure (manual group) to compare the absolute differences in cup placement angles measured using postoperative computed tomography and those planned preoperatively.A total of 217 patients with osteoarthritis due to DDH met the inclusion criteria. Eighty-four patients were matched as the Mako group and 84 as the manual group. The differences were smaller in the Mako group than the manual group in terms of both inclination and anteversion angles (1.1 ± 1.0 versus 4.2 ± 3.1, respectively; 95% CI, 2.4 to 3.8; p 0.0001, and 1.2 ± 1.1 versus 5.8 ± 4.0, respectively; 95% CI, 3.7 to 5.5; p 0.0001).The robotic arm-assisted system may provide more accurate cup placement in THA for DDH.
- Published
- 2022
- Full Text
- View/download PDF
20. A multiscale computational framework for the development of spines in molluscan shells
- Author
-
Derek E. Moulton, Nathanaël Aubert-Kato, Axel A. Almet, and Atsuko Sato
- Abstract
From mathematical models of growth to computer simulations of pigmentation, the study of shell formation has given rise to an abundant number of models, working at various scales. Yet, attempts to combine those models have remained sparse, due to the challenge of combining categorically different approaches. In this paper, we propose a framework to streamline the process of combining the molecular and tissue scales of shell formation. We choose these levels as a proxy to link the genotype level, which is better described by molecular models, and the phenotype level, which is better described by tissue-level mechanics. We also show how to connect observations on shell populations to the approach, resulting in collections of molecular parameters that may be associated with different populations of real shell specimens.The approach is as follows: we use a Quality-Diversity algorithm, a type of black-box optimization algorithm, to explore the range of concentration profiles emerging as solutions of a molecular model, and that define growth patterns for the mechanical model. At the same time, the mechanical model is simulated over a wide range of growth patterns, resulting in a variety of spine shapes. While time-consuming, these steps only need to be performed once and then function as look-up tables. Actual pictures of shell spines can then be matched against the list of existing spine shapes, yielding a potential growth pattern which, in turn, gives us matching molecular parameters. The framework is modular, such that models can be easily swapped without changing the overall working of the method. As a demonstration of the approach, we solve specific molecular and mechanical models, adapted from available theoretical studies on molluscan shells, and apply the multiscale framework to evaluate the characteristics of spines from three distinct populations ofTurbo sazae.Author summaryConnecting genotype to phenotype is a fundamental goal in developmental biology. While many studies examine this link in model organisms for which gene regulatory networks are well known, for non-model organisms, different techniques are required, and multiscale computational modeling offers a promising direction. In this paper, we develop a framework linking molecular-scale interactions to tissue-level growth and mechanics to organism-level characteristics in order to investigate spine formation inT. sazae, a species of mollusc that displays remarkable phenotypic plasticity in spine form. Our analysis uncovers a subtle but statistically significant difference in spine form between shell specimens collected from three different localities in Japan. Moreover, by tracing the difference in form through parametric differences in the multiscale framework, we provide mechanistic insight as to how environmental differences may translate to a change in form. The methodology we present may readily be extended to more detailed modeling of this system, and the conceptual framework is amenable for multiscale analysis in other systems.
- Published
- 2023
- Full Text
- View/download PDF
21. Tob negatively regulates NF-κB activation in breast cancer through its association with the TNF receptor complex
- Author
-
Tadashi Yamamoto, Miho Tokumasu, Atsuko Sato, Taku Ito-Kureha, Mizuki Yamamoto, Nao Ohmine, Kentaro Semba, and Jun-ichiro Inoue
- Abstract
NF-κB mediates transcriptional regulation crucial to many biological functions, and elevated NF-κB activity leads to autoimmune and inflammatory diseases, as well as cancer. Since highly aggressive breast cancers have few therapeutic molecular targets, clarification of key molecular mechanisms of NF-κB signaling would facilitate development of more effective therapy. In this report, we show that Tob, a member of the Tob/BTG family of antiproliferative proteins, acts as a negative regulator of the NF-κB signal in breast cancer. Studies with 35 human breast cancer cell lines reveal that Tob expression is negatively correlated with NF-κB activity. Analysis of The Cancer Genome Atlas (TCGA) database of clinical samples reveals an inverse correlation between Tob expression and NF-κB activity. Tob2, another member of the Tob/BTG family, shows no such negative correlations. Furthermore, in TNF-α treated cells, Tob associates with TNF receptor complex I to suppress polyubiquitylation of RIPK1, which results in repression of NF-kB activity. Therefore, Tob functions as a negative regulator of the NF-κB pathway and may serve as a therapeutic target for aggressive breast cancer.
- Published
- 2023
- Full Text
- View/download PDF
22. Extraction of phase information approximating demagnetization field within a thin-foiled magnet using electron holography observation
- Author
-
Sujin Lee, Atsuko Sato, Takehiro Tamaoka, Kunio Yubuta, Mitsunari Auchi, Taisuke Sasaki, Tadakatsu Ohkubo, Kazuhiro Hono, and Yasukazu Murakami
- Subjects
Structural Biology ,Radiology, Nuclear Medicine and imaging ,Instrumentation - Abstract
This paper proposes a method that provides a phase image related to the demagnetization field (Hd) within a thin-foil permanent magnet using electron holography. The observation of Hd remains a significant challenge because electron holography in principle allows only imaging of the magnetic flux density (B), which is a mixture of the contributions from magnetization (M), stray magnetic field (Hs) outside of the specimen and Hd inside of the specimen. The phase map approximating Hd, which was determined by processing of the electron holography observation from a Nd2Fe14B single-crystalline specimen, showed a good agreement with the prediction by micromagnetic theory. With respect to permanent magnets, this method can be applied to examinations about the coercivity mechanism, which is sensitive to the demagnetization field. Graphical Abstract
- Published
- 2022
23. [TETHERED CORD SYNDROME IN CHILDREN WITH DAYTIME INCONTINENCE]
- Author
-
Yosuke Morizawa, Hiroyuki Satoh, Atsuko Sato, Shun Iwasa, and Yujiro Aoki
- Subjects
Urology - Abstract
(Introduction) In tethered cord syndrome, the lower end of the spinal cord is moored to the caudal tissue, causing various neuropathies. Bladder dysfunction often appears early. We herein evaluated children with daytime urinary incontinence in whom tethered cord syndrome was eventually diagnosed. (Method) Eighteen children (9 males and 9 females) with daytime urinary incontinence were enrolled between March 2011 and October 2017. The causes of their urinary incontinence were investigated using spinal MRI and changes in clinical symptoms before and after untethering surgery. (Results) The average age at the first visit was 6.3 years (range: 4-9 years). Urodynamic testing and a voiding cystourethrogram (VCUG) were performed in all cases of refractory daytime incontinence, and all patients with abnormal findings on either test underwent spinal MRI. The diagnosis based on spinal MRI findings was filum lipoma in eight, occult tethered cord syndrome in four, low set conus in four, conus lipoma in one, and sacral meningeal cyst in one, patient. The average observation period after untethering surgery was 66.3 months (range: 22-116 months). All the patients achieved a cure postoperatively. Four patients were treated for nocturnal enuresis by oral medication, and three patients required urological management via clean, intermittent catheterization. (Conclusions) When treating children with daytime continence, one should consider the possibility of tethered cord syndrome, the diagnosis of which can be aided by urodynamic assessment of bladder function.
- Published
- 2022
24. CLINICAL EXPERIENCE OF TRANSURETHRAL INJECTION USING DEXTRANOMER-HYALURONIC ACID COPOLYMER (Deflux®) FOR CASES OF SECONDARY VESICOURETERAL REFLUX AFTER URETEROCYSTONEOSTOMY
- Author
-
Yujiro Aoki, Zenichi Matsui, Atsuko Sato, Yosuke Morizawa, Shun Iwasa, and Hiroyuki Satoh
- Subjects
Urology - Published
- 2021
- Full Text
- View/download PDF
25. Late Dislocation of In-the-Bag Intraocular Lens in Three Patients with Multiple Chorioretinal Atrophy Associated with Sarcoidosis
- Author
-
Atsuko Sato, Kouichi Ohta, and Emi Fukui
- Subjects
medicine.medical_specialty ,genetic structures ,pigmented chorioretinal atrophy ,business.industry ,medicine.medical_treatment ,Intraocular lens ,Chorioretinal atrophy ,late in-the-bag IOL dislocation ,General Medicine ,Vitreoretinal surgery ,medicine.disease ,Methods observational ,eye diseases ,Ophthalmology ,Retinitis pigmentosa ,medicine ,uveitis ,Case Series ,Sarcoidosis ,International Medical Case Reports Journal ,sense organs ,sarcoidosis ,Stage (cooking) ,business ,Uveitis - Abstract
Kouichi Ohta, Atsuko Sato, Emi Fukui Department of Ophthalmology, Matsumoto Dental University, Shiojiri, Nagano, JapanCorrespondence: Kouichi OhtaDepartment of Ophthalmology, Matsumoto Dental University, 1780 Gobara, Hirooka, Shiojiri, Nagano, 399-0781, JapanTel/Fax +81-263-51-2210Email kouichi.ohta@mdu.ac.jpPurpose: A late dislocation of an in-the-bag intraocular lens (IOL) is strongly associated with pseudoexfoliation and less with retinitis pigmentosa, prior vitreoretinal surgery, and uveitis. We present our findings of late in-the-bag IOL dislocation in three patients with multiple chorioretinal atrophy associated with sarcoidosis.Methods: Observational study of three elderly female Japanese patients with a history of uveitis from sarcoidosis who presented with a late dislocation of an in-the-bag IOL.Results: The late in-the-bag IOL dislocation occurred in the convalescent/quiescent stage of the sarcoidosis. Peripheral multifocal chorioretinal atrophy was the main manifestation in all patients who were diagnosed with definite or presumed sarcoidosis. The dislocated IOLs were successfully removed and new IOLs were implanted with scleral suture fixation followed by no remarkable active uveitis.Conclusion: Clinicians should be aware that patients with peripheral multifocal chorioretinal atrophy associated with sarcoidosis can have a late in-the-bag IOL dislocation.Keywords: late in-the-bag IOL dislocation, pigmented chorioretinal atrophy, sarcoidosis, uveitis
- Published
- 2021
26. Delayed onset Crohn's disease following cheilitis granulomatosa: A case report
- Author
-
Hiroka Iwata, Koji Kamiya, Hirofumi Okada, Atsuko Sato, Takeo Maekawa, Mayumi Komine, and Mamitaro Ohtsuki
- Subjects
Dermatology ,General Medicine - Published
- 2022
- Full Text
- View/download PDF
27. [CLINICAL EXPERIENCE OF TRANSURETHRAL INJECTION USING DEXTRANOMER-HYALURONIC ACID COPOLYMER (Deflux
- Author
-
Yujiro, Aoki, Zenichi, Matsui, Atsuko, Sato, Yosuke, Morizawa, Shun, Iwasa, and Hiroyuki, Satoh
- Subjects
Male ,Vesico-Ureteral Reflux ,Treatment Outcome ,Humans ,Dextrans ,Female ,Hyaluronic Acid ,Retrospective Studies - Abstract
(Objective) We reviewed the clinical efficacy of transurethral Deflux
- Published
- 2022
28. Macular Hole Formation in Eye After Cryotherapy and Intravitreal Bevacizumab Treatment for Vasoproliferative Tumor
- Author
-
Emi Fukui, Kouichi Ohta, and Atsuko Sato
- Subjects
Pars plana ,medicine.medical_specialty ,Visual acuity ,genetic structures ,medicine.medical_treatment ,Cryotherapy ,Vitrectomy ,030204 cardiovascular system & hematology ,Ophthalmoscopy ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Ophthalmology ,medicine ,Macular hole ,medicine.diagnostic_test ,business.industry ,Retinal ,General Medicine ,Exudative retinal detachment ,medicine.disease ,eye diseases ,medicine.anatomical_structure ,chemistry ,030221 ophthalmology & optometry ,sense organs ,medicine.symptom ,business - Abstract
Purpose To report a case of a full-thickness macular hole (MH) that developed after cryotherapy and intravitreal bevacizumab injection (IVB) to treat a retinal vasoproliferative tumor (VPT). Methods Case report of a man with a retinal VPT. Results A 64-year-old Japanese man complained of blurred vision in his right eye. At the initial examination, his best-corrected visual acuity (BCVA) was 20/25 in the right eye and 20/20 in the left eye. Ophthalmoscopy showed a VPT in the lower peripheral retina of the right eye. An exudative retinal detachment and hard exudates were seen around the tumor. Cryotherapy and intravitreal injections of bevacizumab (IVB) were performed. Although the exudative changes were reduced, a MH developed two months after the initial IVB treatment. He underwent 25-gauge pars plana vitrectomy, and the MH was closed. His postoperative BCVA was 20/32 and the VPT was inactive. The reduced BCVA was due to damage of the outer retinal layers. Conclusion Our findings indicate that cryotherapy and IVB are effective treatments for VPT although the possibility of developing a MH should be considered.
- Published
- 2020
- Full Text
- View/download PDF
29. Growth-inhibitory effect of the Reynoutria sachalinensis by coatings
- Author
-
Atsuko Sato and Osamu Hatakeyama
- Subjects
Growth inhibitory - Published
- 2020
- Full Text
- View/download PDF
30. Automated Acquisition and High-precision Phase Analysis of Vast Numbers of Electron Holograms of Nanoparticles
- Author
-
Yoshio Takahashi, Yasukazu Murakami, Tetsuya Akashi, Hiroyuki Shinada, Toshiaki Tanigaki, and Atsuko Sato
- Subjects
Materials science ,business.industry ,law ,Holography ,Nanoparticle ,Optoelectronics ,Electron ,Phase analysis ,business ,Instrumentation ,law.invention - Published
- 2020
- Full Text
- View/download PDF
31. Stereopsis After Unilateral Macular Hole Surgery with Internal Limiting Membrane Peeling
- Author
-
Emi Fukui, Atsuko Sato, Kouichi Ohta, and Nami Senda
- Subjects
medicine.medical_specialty ,Visual acuity ,genetic structures ,medicine.medical_treatment ,Vitrectomy ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Foveal ,Ophthalmology ,Medicine ,Macular hole ,Retina ,business.industry ,Retinal ,medicine.disease ,eye diseases ,Surgery ,Stereoscopic acuity ,medicine.anatomical_structure ,chemistry ,030221 ophthalmology & optometry ,sense organs ,medicine.symptom ,business ,030217 neurology & neurosurgery ,Optic disc - Abstract
Purpose We have shown distinct morphological changes of the foveal retina such as horizontally asymmetrical retinal thicknesses and displacements of the fovea toward the optic disc after successful idiopathic macular hole (MH) closure by MH surgery with internal limiting membrane (ILM) peeling. The purpose of this study was to determine whether these morphological changes will alter the stereoacuity. Setting This was a non-randomized, retrospective study conducted on patients who underwent MH surgery at the Matsumoto Dental University Hospital, Nagano, Japan. Methods Forty patients (22 women, 18 men) who underwent MH surgery with ILM peeling for a unilateral MH were studied. At >6 months after the PPV, the stereoacuity was measured with the Titmus stereotest (TST) and the TNO stereotest (TNO). The relationship between the stereoacuity and the age, MH size, best-corrected visual acuity (BCVA), foveal retinal thickness, and amount of nasal shift of the retina was determined. Results The mean postoperative BCVA was -0.05 ± 0.11 logarithm of the minimum angle of resolution (logMAR) units. The percentage of cases with good stereoacuity of ≤100 sec of arc was 87.5% with the TST and ≤240" was 90% with the TNO test. A better stereoacuity was significantly correlated with a younger age (r = 0.36, P
- Published
- 2020
- Full Text
- View/download PDF
32. Techniques for the effective use of recycled asphalt pavement material as a civil engineering material
- Author
-
Atsuko Sato, Shoji Yokohama, Kakuto Morita, and Osamu Hatakeyama
- Subjects
Engineering ,Asphalt pavement ,business.industry ,business ,Civil engineering - Published
- 2020
- Full Text
- View/download PDF
33. Magnetic flux density measurements from grain boundary phase in 0.1 at% Ga-doped Nd–Fe–B sintered magnet
- Author
-
Tadakatsu Ohkubo, Daisuke Shindo, Takehiro Tamaoka, Kazuhiro Hono, Taisuke Sasaki, Yasukazu Murakami, Youngji Cho, Atsuko Sato, and Ken Harada
- Subjects
010302 applied physics ,Materials science ,Condensed matter physics ,Magnetism ,Mechanical Engineering ,Demagnetizing field ,Metals and Alloys ,02 engineering and technology ,Coercivity ,021001 nanoscience & nanotechnology ,Condensed Matter Physics ,01 natural sciences ,Electron holography ,Condensed Matter::Materials Science ,Ferromagnetism ,Mechanics of Materials ,Condensed Matter::Superconductivity ,Phase (matter) ,Magnet ,0103 physical sciences ,General Materials Science ,Grain boundary ,0210 nano-technology - Abstract
The magnetism of a narrow (~1.6 nm) grain boundary phase produced in a 0.1 at% Ga-doped Nd–Fe–B sintered magnet was examined using electron holography. The magnetic flux density was determined to be 0.8 ± 0.1 T, which was smaller than that for a commercial magnet free from Ga doping (~1.0 T). The presence of a ferromagnetic grain boundary phase reasonably explained the functionality of the 0.1 at% Ga-doped system, such as the improvement in the squareness of the demagnetization curve. The observations provide useful information for deeper understanding of the coercivity mechanism in Ga-doped Nd–Fe–B sintered magnets.
- Published
- 2020
- Full Text
- View/download PDF
34. Midterm Outcomes and Frequency of Osteolysis of Total Hip Arthroplasty Using Cementless Modular Stem for Asian Patients
- Author
-
Masaaki Matsubara, Naoki Okuda, Sachiyuki Tsukada, Akimasa Kimura, Masanori Kase, and Atsuko Sato
- Subjects
Reoperation ,musculoskeletal diseases ,medicine.medical_specialty ,Osteolysis ,Arthroplasty, Replacement, Hip ,Radiography ,Prosthesis Design ,03 medical and health sciences ,0302 clinical medicine ,Asian People ,medicine ,Deformity ,Humans ,Orthopedics and Sports Medicine ,Retrospective Studies ,Fixation (histology) ,030222 orthopedics ,business.industry ,Modular system ,Metal debris ,Middle Aged ,musculoskeletal system ,medicine.disease ,Prosthesis Failure ,Surgery ,Treatment Outcome ,Dysplasia ,Hip Joint ,Hip Prosthesis ,medicine.symptom ,business ,Follow-Up Studies ,Total hip arthroplasty - Abstract
Modular stems are useful for total hip arthroplasty (THA) in anatomically difficult dysplasia. Here, we present mean 6.8-year outcomes of cementless primary THA using S-ROM-A (modified modular stem for Asian patients) femoral prosthesis in anatomically difficult cases.Charts of 373 patients (461 hips) undergoing THA (mean age, 58 years) were reviewed for clinical evaluation of modified Merle d'Aubigné-Postel score and Kaplan-Meier survivorship with revision for any reason as the end point. For radiographic analysis, 331 patients (412 hips) followed up for ≥5 years were included. Bearing couples were metal-on-metal (n = 145), metal-on-polyethylene (n = 120), and ceramic-on-polyethylene (n = 147). Radiography and multiplanar computed tomography were performed.No postoperative dislocation or deep infection occurred. Mean modified Merle d'Aubigné-Postel score improved significantly (10.9 points preoperatively, 16.7 points at last follow-up; P.001). Cumulative 5- and 10-year stem survival rates were 100% and 84%, respectively (95% confidence interval, 75%-93%). All stems were classified as bone ingrown fixation. Osteolysis occurred in metal-on-metal (42.8%) and metal-on-polyethylene (15.8%) groups. Mean time to osteolysis was ~3 years, with no significant difference between 3 groups (P = .264). In logistic regression, lower cup inclination angle was significantly associated with osteolysis (odds ratio, 0.914; 95% confidence interval, 0.84-0.99; P = .029).S-ROM-A femoral prosthesis achieved excellent midterm fixation, and the modular system was useful in primary THA with severe deformity. Bearing couples are potentially associated with adverse reactions to metal debris. S-ROM-A with ceramic-on-polyethylene bearing couples may be an option for anatomically difficult THA.
- Published
- 2020
- Full Text
- View/download PDF
35. ELUCIDATION ON THE DEFORMATION MECHANISM OF BERM DITCH IN SNOWY COLD REGION
- Author
-
Shunzo Kawajiri, Atsuko Sato, Dai Nakamura, Satoshi Yamashita, Takayuki Adachi, Takayuki Kawaguchi, and Tatsuya Watanabe
- Subjects
geography ,geography.geographical_feature_category ,Berm ,Deformation mechanism ,Ditch ,Geotechnical engineering ,Geology - Published
- 2020
- Full Text
- View/download PDF
36. EXAMPLE OF MEASUREMENT FOR FROST HEAVING FORCE ACTING ON FULL-SCALE GROUND ANCHOR AND SOIL NAILING
- Author
-
Atsuko Sato
- Subjects
Environmental Engineering ,Soil Science ,Building and Construction ,Geotechnical Engineering and Engineering Geology - Published
- 2022
- Full Text
- View/download PDF
37. Urodynamics findings pre- and post-untethering surgery in children with filum lipoma: A single-institution experience
- Author
-
Yosuke Morizawa, Hiroyuki Satoh, Masashi Arai, Shun Iwasa, Atsuko Sato, and Kiyohide Fujimoto
- Subjects
Vesico-Ureteral Reflux ,Urodynamics ,Cystography ,Urology ,Humans ,Lipoma ,Postoperative Period ,Child ,Aged - Abstract
We aimed to investigate the changes in urodynamics and voiding cystourethrogram parameters on pre- and post-untethering surgery in patients aged under 2 years with filum lipoma.Sixty-two patients were enrolled in this study. The changes in urodynamics and voiding cystourethrogram parameters were compared before untethering surgery and 6 months after untethering surgery. These parameters were bladder volume, bladder deformity, vesicoureteral reflux during voiding cystourethrogram, detrusor overactivity, bladder compliance, and post-void residual volume in urodynamics.Bladder volume during voiding cystourethrogram and bladder compliance increased significantly from 89.8 ± 49.5 mL to 114.5 ± 50.5 mL (P = 0.0069) and 10.2 ± 6.2 mL/mmHAccording to voiding cystourethrogram results, bladder function and urodynamics in patients with filum lipoma significantly improved after untethering surgery. Non-invasive assessment based on measurements of post-void residual should be considered as a postoperative follow-up method.
- Published
- 2022
38. The size of the mesh sheet and the growth suppression of Fallopia sachalinensis (F. Schimidt) Ronse Decr
- Author
-
Atsuko SATO and Hirochika HAYASHI
- Published
- 2022
- Full Text
- View/download PDF
39. Effective Subgrade Remediation by Materials Improved with Blast Furnace Type B Cement
- Author
-
Naoyuki Kuji, Osamu Hatakeyama, and Atsuko Sato
- Subjects
Cement ,Blast furnace ,Environmental remediation ,Road surface ,Soil water ,Frost heaving ,Environmental science ,Geotechnical engineering ,Frost (temperature) ,Subgrade - Abstract
In cold regions, the road surface sometimes deforms from frost heaving of the subgrade. For this reason, road construction in the cold regions of Japan is done by using non-frost heaving materials for the layers within the frost penetration depth of the subgrade. In Japan, materials generated at road construction sites are reused in order to make effective use of resources. Measures are taken when the materials generated from construction are unsuitable for use as subgrade materials. One method for improving such soil is by adding a solidifier. To use solidified soil, which is a material improved by the addition of a solidifying agent, for the subgrade in cold regions, such soil must have sufficient strength and must not be susceptible to freezing. Quality control of subgrades made with solidified soil is expense and time consuming. Therefore, a simple method has been called for. To develop such a method, we experimentally solidified some poor-quality soil specimens and investigated their strength and frost heave susceptibility by several types of tests. The tests revealed that a strength much higher than that required for ordinary subgrade is needed to use solidified soils as subgrade materials. It was also found that a method involving impact acceleration can be applied for quality control checks of a subgrade made with solidified soil.
- Published
- 2021
- Full Text
- View/download PDF
40. Significance of Data Selection in Deep Learning for Reliable Binding Mode Prediction of Ligands in the Active Site of CYP3A4
- Author
-
Teruki Honma, Akihiko Konagaya, Atsuko Sato, and Naoki Tanimura
- Subjects
Databases, Factual ,Protein family ,Drug design ,Ligands ,010402 general chemistry ,01 natural sciences ,Convolutional neural network ,Deep Learning ,Drug Discovery ,Cytochrome P-450 CYP3A ,Humans ,Binding Sites ,Receiver operating characteristic ,Artificial neural network ,010405 organic chemistry ,Chemistry ,business.industry ,Deep learning ,Mode (statistics) ,Pattern recognition ,General Chemistry ,General Medicine ,0104 chemical sciences ,Artificial intelligence ,Target protein ,business - Abstract
For rational drug design, it is essential to predict the binding mode of protein-ligand complexes. Although various machine learning-based models have been reported that use convolutional neural networks (deep learning) to predict binding modes from three-dimensional structures, there are few detailed reports on how best to construct and use datasets. Here, we examined how different datasets affected the prediction of the binding mode of CYP3A4 by a three-dimensional neural network when the number of crystal structures for the target protein was limited. We used four different training datasets: one large, general dataset containing various protein complexes and three smaller, more specific datasets containing complexes with CYP3A4-like pockets, complexes with CYP3A4-binding ligands, and complexes with CYP protein family members. We then trained models with different combinations of datasets with or without subsequent fine-tuning and evaluated the binding mode prediction performance of each model. The best receiver operating characteristic (ROC) area under the curve (AUC) model with respect to area under the receiver operating characteristic curve was obtained by training with a combination of the general protein and CYP family datasets. However, the ROC AUC-recall balanced model was obtained by training with this combination of datasets followed by fine-tuning with the CYP3A4-binding ligands dataset. Our results suggest that datasets that balance protein functionality and data size are important for optimizing binding mode prediction performance. In addition, datasets with large median binding pocket sizes may be important for the binding mode prediction specifically of CYP3A4.
- Published
- 2019
- Full Text
- View/download PDF
41. DnaJ chaperones contribute to canalization
- Author
-
Joris de Roo, Atsuko Sato, Samantha Jane Hughes, Alison Woollard, Christof Francke, Inge Vrinds, and Sebastian M. Shimeld
- Subjects
0106 biological sciences ,0301 basic medicine ,Genetics ,endocrine system ,Gene knockdown ,Physiology ,Robustness (evolution) ,Biology ,biology.organism_classification ,010603 evolutionary biology ,01 natural sciences ,Phenotype ,03 medical and health sciences ,030104 developmental biology ,RNA interference ,Genetic variation ,DNAJA2 ,Animal Science and Zoology ,Molecular Biology ,Gene ,Ecology, Evolution, Behavior and Systematics ,Caenorhabditis elegans - Abstract
Canalization, an intrinsic robustness of development to external (environmental) or internal (genetic) perturbations, was first proposed over half a century ago. However, whether the robustness to environmental stress (environmental canalization [EC]) and to genetic variation (genetic canalization) are underpinned by the same molecular basis remains elusive. The recent discovery of the involvement of two endoplasmic reticulum (ER)-associated DnaJ genes in developmental buffering, orthologues of which are conserved across Metazoa, indicates that the role of ER-associated DnaJ genes might be conserved across the animal kingdom. To test this, we surveyed the ER-associated DnaJ chaperones in the nematode Caenorhabditis elegans. We then quantified the phenotype, in the form of variance and mean of seam cell counts, from RNA interference knockdown of DnaJs under three different temperatures. We find that seven out of eight ER-associated DnaJs are involved in either EC or microenvironmental canalization. Moreover, we also found two DnaJ genes not specifically associated with ER (DNAJC2/dnj-11 and DNAJA2/dnj-19) were involved in canalization. Protein expression pattern showed that these DnaJs are upregulated by heat stress, yet not all of them are expressed in the seam cells. Moreover, we found that most of the buffering DnaJs also control lifespan. We therefore concluded that a number of DnaJ chaperones, not limited to those associated with the ER, are involved in canalization as a part of the complex system that underlies development.
- Published
- 2019
- Full Text
- View/download PDF
42. Chromosomal Inversion Polymorphisms in Two Sympatric Ascidian Lineages
- Author
-
Noriyuki Satoh, Yukie Mihirogi, Manabu Fujie, Mayumi Kawamitsu, Yutaka Satou, John D. D. Bishop, Kanako Hisata, Hitoyoshi Yasuo, Atsuko Sato, Kyoto University [Kyoto], Ochanomizu University, Laboratoire de Biologie du Développement de Villefranche sur mer (LBDV), Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Institut de la Mer de Villefranche (IMEV), Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS), Marine Biological Association of the United Kingdom (MBA), Okinawa Institute of Science and Technology Graduate University, and Okinawa Institute of Science and Technology Graduate University (OIST)
- Subjects
AcademicSubjects/SCI01140 ,0106 biological sciences ,Sympatry ,Letter ,Biology ,010603 evolutionary biology ,01 natural sciences ,Genome ,Gene flow ,03 medical and health sciences ,Genome Size ,Genetic algorithm ,Genetics ,Animals ,genome ,Ecology, Evolution, Behavior and Systematics ,030304 developmental biology ,Local adaptation ,Chromosomal inversion ,[SDV.GEN]Life Sciences [q-bio]/Genetics ,0303 health sciences ,Polymorphism, Genetic ,AcademicSubjects/SCI01130 ,biology.organism_classification ,chromosomal speciation ,Ciona intestinalis ,Ciona ,[SDV.BA.ZI]Life Sciences [q-bio]/Animal biology/Invertebrate Zoology ,Evolutionary biology ,Sympatric speciation ,Chromosome Inversion ,genomes - Abstract
Chromosomal rearrangements can reduce fitness of heterozygotes and can thereby prevent gene flow. Therefore, such rearrangements can play a role in local adaptation and speciation. In particular, inversions are considered to be a major potential cause for chromosomal speciation. There are two closely related, partially sympatric lineages of ascidians in the genus Ciona, which we call type-A and type-B animals in the present study. Although these invertebrate chordates are largely isolated reproductively, hybrids can be found in wild populations, suggesting incomplete prezygotic barriers. Although the genome of type-A animals has been decoded and widely used, the genome for type-B animals has not been decoded at the chromosomal level. In the present study, we sequenced the genomes of two type-B individuals from different sides of the English Channel (in the zone of sympatry with type-A individuals) and compared them at the chromosomal level with the type-A genome. Although the overall structures were well conserved between type A and type B, chromosomal alignments revealed many inversions differentiating these two types of Ciona; it is probable that the frequent inversions have contributed to separation between these two lineages. In addition, comparisons of the genomes between the two type-B individuals revealed that type B had high rates of inversion polymorphisms and nucleotide polymorphisms, and thus type B might be in the process of differentiation into multiple new types or species. Our results suggest an important role of inversions in chromosomal speciation of these broadcasting spawners.
- Published
- 2021
- Full Text
- View/download PDF
43. Drinking Molecular Hydrogen Water Is Beneficial to Cardiovascular Function in Diet-Induced Obesity Mice
- Author
-
Akira Oyamada, Haruchika Masuda, Yoshihiro Nakagawa, Tomoko Shizuno, Atsuko Sato, Kazuo Ishiwata, Takayuki Asahara, and Kumiko Miyata
- Subjects
0301 basic medicine ,medicine.medical_specialty ,obesity ,QH301-705.5 ,cardiovascular disorders ,Adipose tissue ,Blood sugar ,White adipose tissue ,030204 cardiovascular system & hematology ,General Biochemistry, Genetics and Molecular Biology ,Article ,metabolic syndrome ,Muscle hypertrophy ,03 medical and health sciences ,0302 clinical medicine ,Downregulation and upregulation ,white adipose tissue ,Enos ,Internal medicine ,Brown adipose tissue ,medicine ,Biology (General) ,molecular hydrogen ,General Immunology and Microbiology ,biology ,brown adipose tissue ,biology.organism_classification ,medicine.disease ,030104 developmental biology ,medicine.anatomical_structure ,Endocrinology ,Metabolic syndrome ,General Agricultural and Biological Sciences - Abstract
Simple Summary Molecular hydrogen (MH) reportedly exerts therapeutic effects against inflammatory diseases by alleviating oxidative stress. We investigated the cardiovascular protective effects of molecular hydrogen water (MHW) intake using high-fat diet-induced obesity (DIO) mice. We observed that MHW intake for 2 weeks did not improve the blood sugar level or body weight but decreased heart weight in DIO mice. Notably, MHW intake alleviated oxidative stress in both the heart and the adipose tissue. Moreover, it improved cardiac hypertrophy and restored left ventricular function in DIO mice, and promoted the histological conversion of energy storage to expenditure in adipose tissues with the upregulation of thermogenic and cardiovascular protective genes. Furthermore, MHW restored endothelial progenitor cell (EPC) bioactivity to maintain vascular homeostasis. Taken together, MHW intake exerts cardiovascular protective effects in DIO mice. Hence, MHW intake is a potential prophylactic strategy against cardiovascular disorders in metabolic syndrome. Abstract Molecular hydrogen (MH) reportedly exerts therapeutic effects against inflammatory diseases as a suppressor of free radical chain reactions. Here, the cardiovascular protective effects of the intake of molecular hydrogen water (MHW) were investigated using high-fat diet-induced obesity (DIO) mice. MHW was prepared using supplier sticks and degassed water as control. MHW intake for 2 weeks did not improve blood sugar or body weight but decreased heart weight in DIO mice. Moreover, MHW intake improved cardiac hypertrophy, shortened the width of cardiomyocytes, dilated the capillaries and arterioles, activated myocardial eNOS-Ser-1177 phosphorylation, and restored left ventricular function in DIO mice. MHW intake promoted the histological conversion of hypertrophy to hyperplasia in white and brown adipose tissues (WAT and BAT) with the upregulation of thermogenic and cardiovascular protective genes in BAT (i.e., Ucp-1, Vegf-a, and eNos). Furthermore, the results of a colony formation assay of bone-marrow-derived endothelial progenitor cells (EPCs) indicated that MHW activated the expansion, differentiation, and mobilization of EPCs to maintain vascular homeostasis. These findings indicate that the intake of MHW exerts cardiovascular protective effects in DIO mice. Hence, drinking MHW is a potential prophylactic strategy against cardiovascular disorders in metabolic syndrome.
- Published
- 2021
- Full Text
- View/download PDF
44. INFLUENCE OF PREPARATION CONDITIONS ON SOLIDIFIED-CRUSHED SOIL CHARACTERISTICS AND STRENGTH
- Author
-
Atsuko Sato and Osamu Hatakeyama
- Subjects
Cement ,geography ,Environmental Engineering ,Materials science ,geography.geographical_feature_category ,Soil Science ,Building and Construction ,engineering.material ,Geotechnical Engineering and Engineering Geology ,Soil characteristics ,engineering ,Geotechnical engineering ,Deformation (engineering) ,Levee ,Lime - Abstract
When the soil generated during road or river excavation work is too soft to be used as a material, it can be improved by the use of solidifiers such as cement and lime. However, if an embankment has excessive strength as a result of solidification, the embankment may be difficult to re-excavate. High-strength embankments may fail if they are constructed on soft ground and are not able to follow the behavior of that ground. For this reason, there is a demand for a material whose strength development can be controlled even when a solidifier is added. As a solution to this issue, we investigated the use of crushed solidified soil. Crushed solidified soil is produced by adding a solidifier to soil and then crushing the soil in the middle of the solidification process. It is considered that the type and amount of solidifier and the timing for crushing have considerable influence on the physical properties and strength of the product. Therefore, we investigated the physical properties and strength of the crushed solidified soil and constructed two types of full-scale embankments on soft ground. We compared the deformation characteristics of these two embankments. We found that the crushed solidified soil had lower strength than the solidified soil and that the physical properties and strength of the material depended on the time elapsed before crushing of the solidified soil. Furthermore, it was found that the embankment by solidified crushed soil follows the deformation of soft ground
- Published
- 2021
- Full Text
- View/download PDF
45. Chromosomal inversion polymorphisms in two sympatric ascidian lineages
- Author
-
Yutaka, Satou, Atsuko, Sato, Hitoyoshi, Yasuo, Yukie, Mihirogi, John, Bishop, Manabu, Fujie, Mayumi, Kawamitsu, Kanako, Hisata, Noriyuki, Satoh, Yutaka, Satou, Atsuko, Sato, Hitoyoshi, Yasuo, Yukie, Mihirogi, John, Bishop, Manabu, Fujie, Mayumi, Kawamitsu, Kanako, Hisata, and Noriyuki, Satoh
- Abstract
Chromosomal rearrangements can reduce fitness of heterozygotes and can thereby prevent gene flow. Therefore, such rearrangements can play a role in local adaptation and speciation. In particular, inversions are considered to be a major potential cause for chromosomal speciation. There are two closely related, partially sympatric lineages of ascidians in the genus Ciona, which we call type-A and type-B animals in the present study. While these invertebrate chordates are largely isolated reproductively, hybrids can be found in wild populations, suggesting incomplete prezygotic barriers. Although the genome of type-A animals has been decoded and widely used, the genome for type-B animals has not been decoded at the chromosomal level. In the present study, we sequenced the genomes of two type-B individuals from different sides of the English Channel (in the zone of sympatry with type-A individuals) and compared them at the chromosomal level with the type-A genome. While the overall structures were well conserved between type A and type B, chromosomal alignments revealed many inversions differentiating these two types of Ciona; it is probable that the frequent inversions have contributed to separation between these two lineages. In addition, comparisons of the genomes between the two type-B individuals revealed that type B had high rates of inversion polymorphisms and nucleotide polymorphisms, and thus type B might be in the process of differentiation into multiple new types or species. Our results suggest an important role of inversions in chromosomal speciation of these broadcasting spawners., source:https://academic.oup.com/gbe/advance-article/doi/10.1093/gbe/evab068/6209075
- Published
- 2021
46. Growth suppression survey of Japanese knotweed (Reynoutria sachalinensis (Fr. Schm.) Nakai) in the mesh sheet covering area
- Author
-
Atsuko SATO and Hirochika HAYASHI
- Published
- 2021
- Full Text
- View/download PDF
47. Seminal Vesicle Cysts With Upper Urinary Tract Abnormalities: A Single-center Case Series of Pediatric Zinner Syndrome
- Author
-
Yosuke Morizawa, Hiroyuki Satoh, Ryohei Kufukihara, Shun Iwasa, Kosuke Takemura, and Atsuko Sato
- Subjects
Male ,Pathology ,medicine.medical_specialty ,Adolescent ,Urology ,030232 urology & nephrology ,Multicystic dysplastic kidney ,Kidney ,Mesonephric duct ,03 medical and health sciences ,0302 clinical medicine ,Seminal vesicle ,Maldevelopment ,medicine ,Humans ,Abnormalities, Multiple ,Ejaculatory duct obstruction ,Renal agenesis ,Upper urinary tract ,business.industry ,Cysts ,Infant ,Seminal Vesicles ,Syndrome ,medicine.disease ,medicine.anatomical_structure ,030220 oncology & carcinogenesis ,Agenesis ,Genital Diseases, Male ,Ureter ,business - Abstract
Seminal vesicle cysts are usually congenital and frequently accompanied by upper urinary tract abnormalities due to mesonephric duct maldevelopment. Zinner syndrome, first described in 1914, refers to a triad of features consisting of seminal vesicle cysts, ejaculatory duct obstruction, and unilateral (mostly ipsilateral) renal agenesis. We herein present four pediatric patients with Zinner syndrome diagnosed at a children's medical center. A remnant ureteral structure was observed in three (75%) patients. Interestingly, a multicystic dysplastic kidney was present in one (25%) patient before it eventually disappeared. These findings suggest possible involvement of renal dysgenesis rather than agenesis in Zinner syndrome.
- Published
- 2020
48. Case of lichen planus pemphigoides after pembrolizumab therapy for advanced urothelial carcinoma
- Author
-
Mayumi Komine, Koji Kamiya, Takeo Maekawa, Atsuko Sato, Mamitaro Ohtsuki, Toru Sugihara, Hirofumi Okada, and Satoru Murata
- Subjects
medicine.medical_specialty ,business.industry ,Carcinoma ,Lichen Planus ,Dermatology ,General Medicine ,Pembrolizumab ,Antibodies, Monoclonal, Humanized ,Lichen planus pemphigoides ,Humans ,Medicine ,business ,Urothelial carcinoma - Published
- 2020
- Full Text
- View/download PDF
49. Increasing bladder capacity and vesicoureteral reflux in pediatric kidney transplant patients
- Author
-
Atsuko Sato, Yosuke Morizawa, Hiroshi Hataya, Ryoko Harada, Shun Iwasa, Riku Hamada, Hiroyuki Satoh, and Yujiro Aoki
- Subjects
medicine.medical_specialty ,Urology ,030232 urology & nephrology ,Renal function ,Bladder capacity ,urologic and male genital diseases ,Kidney transplant ,Vesicoureteral reflux ,03 medical and health sciences ,0302 clinical medicine ,medicine ,Humans ,Risk factor ,Child ,Kidney transplantation ,Aged ,Retrospective Studies ,Vesico-Ureteral Reflux ,business.industry ,digestive, oral, and skin physiology ,Hazard ratio ,medicine.disease ,Kidney Transplantation ,digestive system diseases ,Transplantation ,surgical procedures, operative ,030220 oncology & carcinogenesis ,Replantation ,Ureter ,business - Abstract
Objectives To investigate the frequency of vesicoureteral reflux, and the relationship of pretransplant decreased bladder capacity and post-transplant vesicoureteral reflux in children undergoing kidney transplantation. Methods A voiding cystourethrography was carried out in 172 pediatric kidney transplantation recipients before, and 4 months after, transplantation to evaluate bladder capacity and vesicoureteral reflux. The correlation of post-transplant vesicoureteral reflux with pretransplant bladder capacity, vesicoureteral reflux in the native kidney and the method of ureteral reimplantation (intravesical/extravesical) was analyzed. Atrophic bladder was defined as having ≤50% functional bladder capacity (age in years + 2) × 25 (mL) or ≤150 mL in patients aged >10 years. Results Bladder capacity increased remarkably after transplantation in both post-transplant vesicoureteral reflux- group (from 180 to 253 mL) and vesicoureteral reflux+ group (from 82 to 171 mL). Voiding cystourethrography showed vesicoureteral reflux in 12 cases of kidney transplantation (7%; grade 1: 2, grade 2: 3, grade 3: 7). Pretransplant atrophic bladder was an independent risk factor of post-transplant vesicoureteral reflux (P = 0.004, hazard ratio 9.5). There was no difference in renal function between the vesicoureteral reflux- group and vesicoureteral reflux+ group at 4 months to 5 years post-transplantation. Conclusions Pretransplant atrophic bladder is a risk factor of post-transplant vesicoureteral reflux in pediatric patients. However, bladder capacity can remarkably increase after transplantation, and kidney function in the post-transplant vesicoureteral reflux+ group is stable.
- Published
- 2020
50. Clinical Accuracy of Average Creatinine and Cystatin-C-Based Estimated GFR in Japanese Living Renal Transplantation Donors
- Author
-
Shun Iwasa, Yujiro Aoki, Yosuke Morizawa, Riku Hamada, Atsuko Sato, and Hiroyuki Satoh
- Subjects
Nephrology ,Adult ,Male ,medicine.medical_specialty ,Urology ,Renal function ,urologic and male genital diseases ,Kidney ,Kidney Function Tests ,chemistry.chemical_compound ,Japan ,Internal medicine ,Epidemiology ,medicine ,Living Donors ,Humans ,Cystatin C ,Aged ,Transplantation ,Creatinine ,biology ,business.industry ,Middle Aged ,medicine.disease ,Kidney Transplantation ,chemistry ,Renal transplant ,biology.protein ,Surgery ,Female ,business ,Kidney disease ,Glomerular Filtration Rate - Abstract
To evaluate the clinical accuracy of several estimated glomerular filtration rates (eGFR) using cystatin-C to measure renal function in Japanese renal donors.In total, 61 healthy, potential renal donors were assessed. The average age was 42.7 years (range: 27-67). We evaluated the GFR based on the 24-hour creatinine clearance (Ccr) using 24-hour urine collection, eGFR based on serum creatinine (eGFRcr), and cystatin-C (eGFRcys) levels using an equation developed by the Japanese Society of Nephrology, the average of the eGFRcr and eGFRcys (eGFRave) rates, and an eGFR based on a combination of serum creatinine and cystatin-C values using an equation developed by the Chronic Kidney Disease Epidemiology Collaboration (CKD-EPI). The association between Ccr and each eGFR was evaluated using Pearson's r and the Bland-Altman plot.Pearson's correlation coefficient analysis revealed a significant correlation between the Ccr and the eGFRcr (r = 0.62, P .0001), eGFRave (r = 45, P = .0003), and eGFRcr-cys (r = 0.451, P = .0014). The Bland-Altman study suggested that each eGFR had a low level of agreement with the Ccr because the latter was higher than each eGFR. On the other hand, the eGFRave had the highest level of agreement with CCr × 0.715.The eGFRave may provide a simple and useful method of evaluating renal function in living renal transplant donors.
- Published
- 2020
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.