1. A genome-wide screen links peroxisome regulation with Wnt signaling through RNF146 and TNKS/2
- Author
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Vu, Jonathan T, Tavasoli, Katherine U, Sheedy, Connor J, Chowdhury, Soham P, Mandjikian, Lori, Bacal, Julien, Morrissey, Meghan A, Richardson, Chris D, and Gardner, Brooke M
- Subjects
Biochemistry and Cell Biology ,Biological Sciences ,Genetics ,1.1 Normal biological development and functioning ,2.1 Biological and endogenous factors ,Generic health relevance ,Peroxisomes ,Ubiquitin-Protein Ligases ,Humans ,Wnt Signaling Pathway ,Axin Protein ,Membrane Proteins ,beta Catenin ,HEK293 Cells ,Protein Transport ,CRISPR-Cas Systems ,Medical and Health Sciences ,Developmental Biology ,Biological sciences ,Biomedical and clinical sciences - Abstract
Peroxisomes are membrane-bound organelles harboring metabolic enzymes. In humans, peroxisomes are required for normal development, yet the genes regulating peroxisome function remain unclear. We performed a genome-wide CRISPRi screen to identify novel factors involved in peroxisomal homeostasis. We found that inhibition of RNF146, an E3 ligase activated by poly(ADP-ribose), reduced the import of proteins into peroxisomes. RNF146-mediated loss of peroxisome import depended on the stabilization and activity of the poly(ADP-ribose) polymerases TNKS and TNKS2, which bind the peroxisomal membrane protein PEX14. We propose that RNF146 and TNKS/2 regulate peroxisome import efficiency by PARsylation of proteins at the peroxisome membrane. Interestingly, we found that the loss of peroxisomes increased TNKS/2 and RNF146-dependent degradation of non-peroxisomal substrates, including the β-catenin destruction complex component AXIN1, which was sufficient to alter the amplitude of β-catenin transcription. Together, these observations not only suggest previously undescribed roles for RNF146 in peroxisomal regulation but also a novel role in bridging peroxisome function with Wnt/β-catenin signaling during development.
- Published
- 2024