37 results on '"Aziz NAA"'
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2. Modelling of time-to collision for unmanned aerial vehicle using particles swarm optimization
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Sabikan, Sulaiman Bin, primary, W, Nawawi. S., additional, and Aziz, NAA, additional
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- 2020
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3. Photovoltaic: Perovskite fever: Is Perovskite the future of solar cells?
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Aziz Naamane
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photovoltaic technology ,perovskite ,solar cells ,Renewable energy sources ,TJ807-830 - Abstract
Perovskites, this somewhat "barbaric" term derived from the name of a 19th century Russian mineralogist, Lev Perovski, is not yet known to the public. But in labs around the world researchers are feverishly active around this family of crystals that promise to revolutionize the conversion of solar energy into electricity.Originally the perovskite is a crystal composed of calcium, titanium and oxygen. However, the term is now used to refer to other chemical compounds with identical structures. About ten years ago these materials, then used to make certain electronic components, suddenly emerged as potential candidates for the replacement of expensive silicon cells in solar panels. The hope was mainly based on the cost of perovskite cells, which are significantly lower than those made with silicon crystals and which currently equip most photovoltaic installations
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- 2020
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4. Virtual Sensors to Drive Anaerobic Digestion under a Synergetic Controller
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Hanane Bouchareb, Samia Semcheddine, Mohamed Naguib Harmas, Kouider Nacer M’sirdi, and Aziz Naamane
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Anaerobic digestion ,synergetic control ,soft sensor ,methane ,renewable energy ,Technology - Abstract
A robust synergetic controller using different observers is developed to drive an anaerobic digestion biogas plant. The latter, a highly nonlinear process requires prohibitive cost sensors. Furthermore, some variables are downright immeasurable rendering control an intricate challenge. Only biogas flow which can be effectively measured, due to an easily integrated low cost sensor, will be considered available and used in this work. The proposed synergetic controller depends on immeasurable system states, thus observers will be used for state estimation. Substrate and biomass concentrations required in the synergetic control law will be obtained via three virtual sensors developed for a one stage fermentation process model. The model, used in this paper, consider the mechanization phase responsible for the biogas production because the objective is to improve the amount of methane produced. A simulation study of the biogas plant control with the proposed technique is compared to a classic PID (Proportional, Integral and Derivative) approach. Comparative studies are provided for observation and control via computer simulations.
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- 2019
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5. 100 questions in livestock helminthology research
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Morgan, ER, Aziz, NAA, Blanchard, A, Charlier, J, Charvet, C, Claerebout, E, Geldhof, P, Greer, Andrew, Hertzberg, H, Hodgkinson, J, Höglund, J, Hoste, H, Kaplan, RM, Martínez-Valladares, M, Mitchell, S, Ploeger, HW, Rinaldi, L, von Samson-Himmelstjerna, G, Sotiraki, S, Schnyder, M, Skuce, P, Bartley, D, Kenyon, F, Thamsborg, SM, Vineer, HR, de Waal, T, Williams, AR, van Wyk, JA, and Vercruysse, J
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- 2019
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6. A Machine Learning Web App to Predict Diabetic Blood Glucose Based on a Basic Noninvasive Health Checkup, Sociodemographic Characteristics, and Dietary Information: Case Study.
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Sampa MB, Biswas T, Rahman MS, Aziz NHBA, Hossain MN, and Aziz NAA
- Abstract
Background: Over the past few decades, diabetes has become a serious public health concern worldwide, particularly in Bangladesh. The advancement of artificial intelligence can be reaped in the prediction of blood glucose levels for better health management. However, the practical validity of machine learning (ML) techniques for predicting health parameters using data from low- and middle-income countries, such as Bangladesh, is very low. Specifically, Bangladesh lacks research using ML techniques to predict blood glucose levels based on basic noninvasive clinical measurements and dietary and sociodemographic information., Objective: To formulate strategies for public health planning and the control of diabetes, this study aimed to develop a personalized ML model that predicts the blood glucose level of urban corporate workers in Bangladesh., Methods: Based on the basic noninvasive health checkup test results, dietary information, and sociodemographic characteristics of 271 employees of the Bangladeshi Grameen Bank complex, 5 well-known ML models, namely, linear regression, boosted decision tree regression, neural network, decision forest regression, and Bayesian linear regression, were used to predict blood glucose levels. Continuous blood glucose data were used in this study to train the model, which then used the trained data to predict new blood glucose values., Results: Boosted decision tree regression demonstrated the greatest predictive performance of all evaluated models (root mean squared error=2.30). This means that, on average, our model's predicted blood glucose level deviated from the actual blood glucose level by around 2.30 mg/dL. The mean blood glucose value of the population studied was 128.02 mg/dL (SD 56.92), indicating a borderline result for the majority of the samples (normal value: 140 mg/dL). This suggests that the individuals should be monitoring their blood glucose levels regularly., Conclusions: This ML-enabled web application for blood glucose prediction helps individuals to self-monitor their health condition. The application was developed with communities in remote areas of low- and middle-income countries, such as Bangladesh, in mind. These areas typically lack health facilities and have an insufficient number of qualified doctors and nurses. The web-based application is a simple, practical, and effective solution that can be adopted by the community. Use of the web application can save money on medical expenses, time, and health management expenses. The created system also aids in achieving the Sustainable Development Goals, particularly in ensuring that everyone in the community enjoys good health and well-being and lowering total morbidity and mortality., (©Masuda Begum Sampa, Topu Biswas, Md Siddikur Rahman, Nor Hidayati Binti Abdul Aziz, Md Nazmul Hossain, Nor Azlina Ab Aziz. Originally published in JMIR Diabetes (https://diabetes.jmir.org), 24.11.2023.)
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- 2023
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7. A cross-sectional study of Angiostrongylus malaysiensis in rats and gastropod hosts from recreational parks in Kuala Lumpur, Malaysia: Detection, risk factors and pathology.
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Low SY, Lau SF, Ahmad NI, Sharma RSK, Rosli MZ, Mohd-Taib FS, Ajat MMM, Kamaludeen J, Syed Hussain SS, Wan KL, Salleh A, and Aziz NAA
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- Rats, Humans, Animals, Cross-Sectional Studies, Malaysia epidemiology, Parks, Recreational, Ovum, Larva, Risk Factors, Angiostrongylus, Gastropoda, Parasites, Angiostrongylus cantonensis, Strongylida Infections epidemiology, Strongylida Infections veterinary, Rodent Diseases epidemiology, Rodent Diseases parasitology
- Abstract
Angiostrongylus malaysiensis is a potential zoonotic parasite, which reported to co-occur with A. cantonensis in human cerebrospinal fluid. It is a heteroxenous nematode that primarily develops through the early larval stages in gastropods and attains sexual maturity within rats. This study was conducted to determine the host species responsible for the reservoir of A. malaysiensis and investigate the risk factor for transmission among the hosts in Kuala Lumpur, Malaysia. Sampling was conducted in six recreational parks. The rats were trapped alive using steel wire traps with bait, while the gastropods were collected by active searching. The rats were euthanized and dissected to collect any adult worms observed. The molecular detection of A. malaysiensis was performed by PCR on gastropod tissue samples. Biotic and landscape factors were recorded for risk factor analysis. In total, 82 rats and 330 gastropods were collected throughout the study. Overall, 3.64% of gastropods and 32.9% of rats were infected with A. malaysiensis. Rattus tiomanicus (Malayan wood rat) and Parmarion martensi (Yellow-shelled semi-slug) were found as important hosts for A. malaysiensis. Host species, sampling site and macrohabitat type are risk factors associated with the prevalence of A. malaysiensis infection in rats. For gastropods, host species and sampling site are risk factors that correlate with the parasite detection. In total, 128 adult A. malaysiensis were recovered from the infected rats. The mean intensity of infection with adult A. malaysiensis was 4.65 for Rattus rattus complex and 4.90 for R. tiomanicus. Adult worms were found in the pulmonary artery or right ventricle, while eggs and first-stage larvae were found in capillaries of the caudal lung lobe. Infected lungs showed extravasated red blood cells in the alveolar spaces. The pulmonary arteries in the infected lung lobe were thickened. Kepong Metropolitan Park is the hotspot area for A. malaysiensis in Kuala Lumpur. These results provide essential information for public health officials to develop targeted interventions to reduce the transmission of A. malaysiensis in urban areas, particularly in recreational parks., (© 2023 Wiley-VCH GmbH.)
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- 2023
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8. Direct Detection of Lyme Borrelia: Recent Advancement and Use of Aptamer Technology.
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Nik Kamarudin NAA, Mawang CI, and Ahamad M
- Abstract
Borrelia burgdorferi sensu lato ( B. burgdorferi s.l.), which is predominantly spread by ticks, is the cause of Lyme disease (LD), also known as Lyme borreliosis, one of the zoonotic diseases affecting people. In recent years, LD has become more prevalent worldwide, even in countries with no prior records. Currently, Lyme Borrelia detection is achieved through nucleic acid amplification, antigen detection, microscopy, and in vitro culture. Nevertheless, these methods lack sensitivity in the early phase of the disease and, thus, are unable to confirm active infection. This review briefly discusses the existing direct detection methods of LD. Furthermore, this review also introduces the use of aptamer technology integrated with biosensor platforms to detect the Borrelia antigen. This aptamer technology could be explored using other biosensor platforms targeting whole Borrelia cells or specific molecules to enhance Borrelia detection in the future.
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- 2023
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9. Dosimetric Analysis of Rhizophora -based Phantom Material in Radiation Therapy Applications Using Monte Carlo GATE Simulation.
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Zuber SH, Hadi MFRA, Samson DO, Jayamani J, Rabaiee NA, Aziz MZA, Hashikin NAA, Ying CK, Yusof MFM, and Hashim R
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Purpose: This study aims to determine the percentage depth dose (PDD) of a phantom material made from soy-lignin bonded Rhizophora spp. particleboard coated with a gloss finish by using Monte Carlo Geant4 Application for Tomographic Emission (GATE) simulation., Materials and Methods: The particleboard was fabricated using a hot pressing technique at target density of 1.0 g·cm
-3 and the elemental fraction was recorded for the simulation. The PDD was simulated in the GATE simulation using the linear accelerator Elekta Synergy model for the water phantom and Rhizophora phantom, and the results were compared with the experimental PDD performed by several studies. Beam flatness and beam symmetry were also measured in this study., Results: The simulated PDD for Rhizophora and water was in agreement with the experimental PDD of water with overall discrepancies of 0% to 8.7% at depth ranging from 1.0 to 15.0 cm. In the GATE simulation, all the points passed the clinical 3%/3 mm criterion in comparison with water, with the final percentage of 2.34% for Rhizophora phantom and 2.49% for the water phantom simulated in GATE. Both the symmetries are all within the range of an acceptable value of 2.0% according to the recommendation, with the beam symmetry of the water phantom and Rhizophora phantom at 0.58% and 0.28%, respectively., Conclusions: The findings of this study provide the necessary foundation to confidently use the phantom for radiotherapy purposes, especially in treatment planning., Competing Interests: There are no conflicts of interest., (Copyright: © 2023 Journal of Medical Physics.)- Published
- 2023
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10. Dosimetric assessment of Gadolinium-159 for hepatic radioembolization: Tomographic images and Monte Carlo simulation.
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Musa AS, Abdul Hadi MFR, Hashikin NAA, Ashour NI, and Ying CK
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- Humans, Monte Carlo Method, Yttrium Radioisotopes therapeutic use, Microspheres, Carcinoma, Hepatocellular diagnostic imaging, Carcinoma, Hepatocellular radiotherapy, Liver Neoplasms diagnostic imaging, Liver Neoplasms radiotherapy, Embolization, Therapeutic methods
- Abstract
A common therapeutic radionuclide used in hepatic radioembolization is yttrium-90 (
90 Y). However, the absence of gamma emissions makes it difficult to verify the post-treatment distribution of90 Y microspheres. Gadolinium-159 (159 Gd) has physical properties that are suitable for therapy and post-treatment imaging in hepatic radioembolization procedures. The current study is innovative for conducting a dosimetric investigation of the use of159 Gd in hepatic radioembolization by simulating tomographic images using the Geant4 application for tomographic emission (GATE) Monte Carlo (MC) simulation. For registration and segmentation, tomographic images of five patients with hepatocellular carcinoma (HCC) who had undergone transarterial radioembolization (TARE) therapy were processed using a 3D slicer. The tomographic images with159 Gd and90 Y separately were simulated using the GATE MC Package. The output of simulation (dose image) was uploaded to 3D slicer to compute the absorbed dose for each organ of interests.159 Gd were able to provide a recommended dose of 120 Gy to the tumour, with normal liver and lungs absorbed doses close to that of90 Y and less than the respective maximum permitted doses of 70 Gy and 30 Gy, respectively. Compared to90 Y,159 Gd requires higher administered activity approximately 4.92 times to achieve a tumour dose of 120 Gy. Thus; this research gives new insights into the use of159 Gd as a theranostic radioisotope, with the potential to be used as a90 Y alternative for liver radioembolization., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2023 Elsevier Ltd. All rights reserved.)- Published
- 2023
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11. Radiological and Dosimetric Evaluation of Biomaterial Composite Phantoms with High Energy Photons and Electrons.
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Samson DO, Aziz MZA, Shukri A, Mat Jafri MZ, Hashim R, Zuber SH, Hashikin NAA, Rabba JA, Samson PA, and Yusof MFM
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- Radiometry methods, Radiography, Phantoms, Imaging, Water, Monte Carlo Method, Photons, Electrons
- Abstract
Abstract: The current study was undertaken to investigate the radiological and dosimetric parameters of natural product-based composite (SPI/NaOH/IA-PAE/ Rhizophora spp .) phantoms. The radiological properties of the phantoms were measured at different gamma energies from Compton scatter of photons through angles of 0, 30, 45, 60, 75, and 90 degrees. Ionization chamber (IC) and Gafchromic EBT3 film dosimeters were employed to evaluate the dosimetric characteristics for photons (6-10 MV) and electrons (6-15 MeV). Radiological property results of the composite phantoms were consistent with good quality compared to those of solid water phantoms and theoretical values of water. Photon beam quality index of the SPI15 phantom with p-values of 0.071 and 0.073 exhibited insignificant changes. In addition, good agreement was found between PDD curves measured with IC and Gafchromic EBT3 film for both photons and electrons. The computed therapeutic and half-value depth ranges matched within the limits and are similar to those of water and solid water phantoms. Therefore, the radiological and dosimetric parameters of the studied composite phantom permit its use in the selection of convenient tissue- and water-equivalent phantom material for medical applications., (Copyright © 2023 Health Physics Society.)
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- 2023
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12. Seroprevalence and Factors Associated with Toxoplasma gondii , Neospora caninum , and Besnoitia besnoiti Infections in Cattle and Goats in Selangor, Malaysia.
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Sadiq MB, Muhamad AS, Hamdan SA, Ramanoon SZ, Zakaria Z, Aziz NAA, Mansor R, Arshad SS, Khalid N, Abdul Hamid N, Kamaludeen J, and Syed-Hussain SS
- Abstract
Apicomplexan parasites such as Toxoplasma gondii , Neospora caninum , and Besnoitia besnoiti are widely recognized as causes of production diseases in ruminants. This study aimed to investigate the serological occurrence of T. gondii , N. caninum , and B. besnoiti in cattle and goats from smallholder farms in Selangor, Malaysia. A cross-sectional study was conducted on 19 farms by collecting 404 bovine (n = 225) and caprine (n = 179) serum samples, which were then essayed for T. gondii , N. caninum , and B. besnoiti antibodies using commercially available ELISA test kits. Farm data and animal characteristics were documented, and the data were analyzed using descriptive statistics and logistic regression models. The seroprevalence of T. gondii at animal and farm levels in cattle was 5.3% (95% CI 1.2-7.4%) and 36.8% (95% CI 22.4-58.0%), respectively. Animal-level seropositivity for N. caninum was 2.7% (95% CI 0.4-4.2%) and 5.7% for B. besnoiti (95% CI 1.3-9.4%) with corresponding farm-level seropositivity of 21.0% and 31.5%, respectively. For the goat samples, a high animal- (69.8%; 95% CI 34.1-82.0%) and farm-level (92.3%) seropositivity was recorded for T. gondii , but was relatively lower for N. caninum antibodies, at 3.9% (95% CI 1.5-6.2%) and 38.4% (5/13). The factors associated with T. gondii seropositivity were older animals (above 12 months) (OR = 5.3; 95% CI 1.7-16.6), semi-intensive farms (OR = 2.2; 95% CI 1.3-6.2), the presence of either dogs or cats (OR = 3.6; 95% CI 1.1-12.3), a large herd size (>100 animals) (OR = 3.7; 95% CI 1.4-10.0), and a single source of replacement animals (OR = 3.9; 95% CI 1.6-9.6). These findings are vital in developing effective control measures against these parasites in ruminant farms in Selangor, Malaysia. More national epidemiological research is required to elucidate the spatial distribution of these infections and their potential impact on Malaysia's livestock industry.
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- 2023
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13. Dosimetric Characterization of DSF/NaOH/IA-PAE/ R. spp. Phantom Material for Radiation Therapy.
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Samson DO, Shukri A, Hashikin NAA, Zuber SH, Aziz MZA, Hashim R, Yusof MFM, Rabaiee NA, and Gemanam SJ
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Background: Different compositions of DSF/NaOH/IA-PAE/ R. spp. composite particleboard phantoms were constructed. Methods: Photon attenuation characteristics were ascertained using gamma rays from
137 Cs and60 Co. Absorbed doses at the location of an ionization chamber and Gafchromic EBT3 radiochromic films were calculated for high-energy photons (6 and 10 MV) and electrons (6, 9, 12, and 15 MeV). Results: The calculated TPR20,10 values indicate that the percentage discrepancy for 6 and 10 MV was in the range of 0.29-0.72% and 0.26-0.65%. It was also found that the relative difference in the dmax to water and solid water phantoms was between 1.08-1.28% and 5.42-6.70%. The discrepancies in the determination of PDD curves with 6, 9, 12, and 15 MeV, and those of water and solid water phantoms, ranged from 2.40-4.84%. Comparable results were found using the EBT3 films with variations of 2.0-7.0% for 6 and 10 MV photons. Likewise, the discrepancies for 6, 9, 12, and 15 MeV electrons were within an acceptable range of 2.0-4.5%. Conclusions: On the basis of these findings, the DSF/NaOH/IA-PAE/ R. spp. particleboard phantoms with 15 wt% IA-PAE addition level can be effectively used as alternative tissue-equivalent phantom material for radiation therapy applications.- Published
- 2023
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14. Data on genome resequencing of the rice cultivar MR219 and its abiotic stress tolerant mutant lines, NMR152 and NMR151.
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Ahmad F, Hasan N, Hisham SN, Yusof SN, Hassan AA, Hussein S, Harun AR, and Shamsudin NAA
- Abstract
The genomics and genetic information of Malaysian rice ( Oryza sativa L.) and their mutant lines are very limited. Therefore, the genome resequencing of two drought and submergence tolerant mutant rice lines, NMR152 and NMR151 and their parental line, MR219 was performed using Illumina Hi Seq 4000 platform with 20x sequencing coverage to facilitate the identification of causal mutations and the discovery of candidate variants of single nucleotide polymorphisms (SNPs) from their genome. The identification of SNPs would be useful in developing functional SNP markers related to drought and submergences resistance traits. Genome sequence data (FASTQ format) of the mutants and their parental line have been deposited into the National Center for Biotechnology Information (NCBI) database under sequence read archive (SRA) data with accessions SRR20824202 (NMR152), SRR20995190 (NMR151) and SRR21043964 (MR219), respectively., Competing Interests: The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (© 2022 The Author(s).)
- Published
- 2022
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15. Challenges and opportunities in the application of bioinspired engineered nanomaterials for the recovery of metal ions from mining industry wastewater.
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Noman EA, Al-Gheethi A, Al-Sahari M, Saphira Radin Mohamed RM, Crane R, Aziz NAA, and Govarthanan M
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- Adsorption, Charcoal, Ions, Wastewater, Metal Nanoparticles, Metals, Heavy, Ozone, Water Pollutants, Chemical
- Abstract
Heavy-metal-bearing wastewater is among the most formidable challenges the mining industry currently faces in maintaining its social license to operate. Amongst the technologies available for metal ion adsorption, bioinspired engineering nanomaterials have emerged as one which exhibits great promise. However, current processes used for the preparation of adsorbents (including nanoscale activated carbon and biochar) represent a source of adverse impacts on the environment. In contrast, the application of biogenic-nanoparticles, i.e., those derived from processes catalysed by microbiota, has received significant attention in the last few years. Coupled with this, the use of naturally occurring reagents is of major importance for the sustainability of this emerging industry. This paper analyses the life cycle assessment (LCA) of the synthesis of adsorbents derived from agricultural wastes. Moreover, rather than simply recovering the ecotoxic metals from wastewater, the potential to valorise dissolved metals into high-value metallic nanoparticle products is discussed. LCA analysis revealed that the adsorbent had some adverse impact on the environment. The agricultural wastes contributed 27.86% to global warming, 54.64% to ozone formation, 33.06% to fine particles, and 98.24% to marine eutrophication. Mining wastewater is an important, and largely currently unexploited, source of metal value. However, the often-low concentration of such metals dictates that their conversion into high-value products (such as engineered nanoparticles) is an important new research frontier. Within this the use of biosynthesis methods has emerged as having great potential due to a range of beneficial attributes, including low cost, high efficacy and/or environmental compatibility., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2022 Elsevier Ltd. All rights reserved.)
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- 2022
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16. Utilizing 3D Slicer to incorporate tomographic images into GATE Monte Carlo simulation for personalized dosimetry in yttrium-90 radioembolization.
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Abdul Hadi MFR, Abdullah AN, Hashikin NAA, Ying CK, Yeong CH, Yoon TL, and Ng KH
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- Humans, Monte Carlo Method, Computer Simulation, Radiometry methods, Yttrium Radioisotopes therapeutic use, Liver Neoplasms diagnostic imaging, Liver Neoplasms radiotherapy
- Abstract
Purpose: Monte Carlo (MC) simulation is an important technique that can help design advanced and challenging experimental setups. GATE (Geant4 application for tomographic emission) is a useful simulation toolkit for applications in nuclear medicine. Transarterial radioembolization is a treatment for liver cancer, where microspheres embedded with yttrium-90 (
90 Y) are administered intra-arterially to the tumor. Personalized dosimetry for this treatment may provide higher dosimetry accuracy compared to the conventional partition model (PM) calculation. However, incorporation of three-dimensional tomographic input data into MC simulation is an intricate process. In this article, 3D Slicer, free and open-source software, was utilized for the incorporation of patient tomographic images into GATE to demonstrate the feasibility of personalized dosimetry in hepatic radioembolization with90 Y., Methods: In this article, the steps involved in importing, segmenting, and registering tomographic images using 3D Slicer were thoroughly described, before importing them into GATE for MC simulation. The absorbed doses estimated using GATE were then compared with that of PM. SlicerRT, a 3D Slicer extension, was then used to visualize the isodose from the MC simulation., Results: A workflow diagram consisting of all the steps taken in the utilization of 3D Slicer for personalized dosimetry in90 Y radioembolization has been presented in this article. In comparison to the MC simulation, the absorbed doses to the tumor and normal liver were overestimated by PM by 105.55% and 20.23%, respectively, whereas for lungs, the absorbed dose estimated by PM was underestimated by 25.32%. These values were supported by the isodose distribution obtained via SlicerRT, suggesting the presence of beta particles outside the volumes of interest. These findings demonstrate the importance of personalized dosimetry for a more accurate absorbed dose estimation compared to PM., Conclusion: The methodology provided in this study can assist users (especially students or researchers who are new to MC simulation) in navigating intricate steps required in the importation of tomographic data for MC simulation. These steps can also be utilized for other radiation therapy related applications, not necessarily limited to internal dosimetry., (© 2022 American Association of Physicists in Medicine.)- Published
- 2022
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17. Genotype × Environment Interaction and Stability Analysis of Commercial Hybrid Grain Corn Genotypes in Different Environments.
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Adham A, Ghaffar MBA, Ikmal AM, and Shamsudin NAA
- Abstract
The introduction of superior grain corn genotypes with high and stable yield (YLD) in most environments is important to increase local production and reduce dependency on imported grain corn. In this study, days to tasseling (DT), plant height, and YLD of 11 grain corn genotypes were observed in 10 environments to evaluate the effects of genotype (G), environment (E), and genotype by environment interactions (GEI) using GGE analysis and the stability of genotypes using stability parameters. In each location, grain corn genotypes were arranged in three replications using a randomized complete block design. An analysis of variance showed that all three traits were highly significant toward G and E factors, whereas GEI showed that only DT and YLD were highly significant. Genotype V14 produced the highest YLD of 10,354 kg/ha, followed by V4 (10,114 kg/ha) and V2 (9797.74 kg/ha). These three genotypes also dominated in seven out of 10 tested environments. With regard to stability ranking, genotype V4 was the most stable genotype, with a big gap difference between the second (V14) and third places (V2). Therefore, V14, V4, and V2 were the most promising genotypes because of their great YLD performance and most stable across tested environments, which can be recommended to farmers for high-scale planting.
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- 2022
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18. Estimation of linear and mass attenuation coefficients of soy-lignin bonded Rhizophora spp. particleboard as a potential phantom material using caesium-137 and cobalt-60.
- Author
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Zuber SH, Abdul Hadi MFR, Hashikin NAA, Yusof MFM, Aziz MZA, Hashim R, Oluwafemi SD, and Isa NM
- Subjects
- Cesium Radioisotopes, Cobalt Radioisotopes, Lignin, Monte Carlo Method, Phantoms, Imaging, Radiometry, Rhizophoraceae
- Abstract
In this study, linear and mass attenuation coefficients of fabricated particleboards intended for use as phantom material were estimated using
137 Cs and60 Co radiation sources. Particleboards made of Rhizophora spp. wood trunk bonded with soy flour and lignin were fabricated at a target density of 1.0 g cm-3 , with and without gloss finish coating. Elemental composition of the particleboards was obtained by means of energy dispersive X-ray (EDX) spectroscopy. Experimental setups were simulated via the GATE Monte Carlo (MC) package, with particle histories of 1 × 106 -1 × 107 . Linear and mass attenuation coefficients obtained from measurements and GATE simulations were compared and discussed. The percentage differences between the measured and simulated linear and mass attenuation coefficients of the samples were reasonably small (2.05-4.88% for137 Cs and 3.24-5.38% for60 Co). It is shown that all the particleboards have the potential to be used as phantom materials as the attenuation coefficients measured were in good agreement with those of water (calculated with XCOM) and with those simulated with the GATE toolkit. The use of gloss finish coating also did not show any significant effect on the attenuation coefficient of the phantom material. Verification of experimental results via GATE simulations has been shown crucial in providing reliable data for energy transmission studies. Based on the results achieved in this study, it is concluded that the studied material-Rhizophora spp. wood trunk bonded with soy flour and lignin including gloss finish coating-can be used in radiation dosimetry studies., (© 2022. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.)- Published
- 2022
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19. Prevalence, risk factors, and infection intensity of fasciolosis in dairy cattle in Boyolali, Indonesia.
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Kurnianto H, Ramanoon SZ, Aziz NAA, and Indarjulianto S
- Abstract
Background and Aim: Fasciolosis is a significant problem in veterinary and public health, causing huge economic losses. Epidemiological studies of fasciolosis in dairy cattle in Indonesia are few and existing reports primarily focus on prevalence. This study aimed to determine the prevalence, risk factors, and infection intensity of fasciolosis in dairy cattle in Boyolali, Indonesia., Materials and Methods: This cross-sectional study included 400 dairy cattle from 72 household farms in eight subdistricts. Fecal samples (n=400) were examined using the Flukefinder
® kit and the simple sedimentation technique was the gold standard for fasciolosis. In-person interviews using questionnaires collected data on farmers, farms, and animal characteristics. Chi-square and logistic regression analyses were performed to evaluate the associated risk factors for fasciolosis, and p < 0.05 was considered statistically significant., Results: The overall prevalence of fasciolosis in dairy cattle in Boyolali, Indonesia, was 16.50% (95% confidence interval [CI] 12.85-20.15) at the animal level (n = 400), whereas 40.28% at household farms (n = 72) level (95% CI 18.67-51.88). The relative sensitivity and specificity of the Flukefinder® kit compared with those of the gold standard were 79.49% and 92.52%, respectively, with a moderate agreement (kappa=0.59; p < 0.001). Fasciolosis was more likely in cattle originating from the Mojosongo subdistrict than from other subdistricts (odds ratio (OR)=5.28, 95% CI 1.22-22.94); from farms that did not process manure versus from those that did (OR = 3.03, 95% CI 1.43-4.71); and with farmers that had never attended extension programs compared with those who had (OR = 4.72, 95% CI 1.99-11.19). Studied cattle were mostly affected by light Fasciola spp. infections (92.4%, 95% CI 77.8-100%) followed by moderate (6.1%, 95% CI 0-22.2%) and heavy (1.5%, 95% CI 0-5.6%) infections., Conclusion: Fasciolosis is prevalent in dairy cattle in Boyolali, Indonesia. Control efforts should target the high-risk Mojosongo subdistrict, emphasize the importance of processing manure, and encourage farmers to attend extension programs. Flukefinder® is a practical on-site diagnostic kit for fasciolosis in Indonesian dairy farms. Parasite species identification and a malacological survey of intermediate hosts of Fasciola spp. in the farming environment are required for further research., Competing Interests: The authors declare that they have no competing interests., (Copyright: © Kurnianto, et al.)- Published
- 2022
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20. Spectrum of COVID-19 clinical characteristics among patients presenting to the primary healthcare in Qatar during the early stages of the pandemic: a retrospective multicentre cross-sectional study.
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Ismail M, Joudeh A, Al-Dahshan A, Alsaadi MM, Al Abdulla S, and Selim NAA
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- Adult, Aged, Cross-Sectional Studies, Hospitalization, Humans, Male, Middle Aged, Primary Health Care, Qatar epidemiology, Retrospective Studies, SARS-CoV-2, Young Adult, COVID-19, Pandemics
- Abstract
Objectives: To describe clinical characteristics and laboratory investigations of patients with COVID-19 diagnosed in primary care in Qatar and to assess predictors of hospitalisation., Design: A retrospective cross-sectional study., Setting and Participants: 3515 confirmed patients with COVID-19 diagnosed in any of the 27 primary healthcare centres in Qatar between 9 April 2020 and 30 June 2020., Main Outcome Measures: Demographic characteristics, comorbidities, contact tracing, clinical and laboratory data, in addition to patient disposition at the time of diagnosis RESULTS: Mean age of patients was 35.5 years (±14.7). 2285 patients (65.0%) were males, 961 patients (27.3%) had a history of concomitant comorbidity and 640 patients (18.2%) were asymptomatic. Adult patients (19-64 years old) were more likely to report symptoms than children or elderly. Fever and cough were the most frequently documented symptoms affecting 1874 patients (46.7%) and 1318 patients (37.5%), respectively. Most patients had normal vital signs at presentation; however, patients who were subsequently hospitalised had higher median temperature than non-hospitalised patients (37.7°C, IQR: 37.0°C-38.4°C, and 37.2°C, IQR: 36.8°C-37.8°C, respectively). Hospitalised patients had significantly higher C reactive protein (CRP) (median CRP: 20 mg/L, IQR: 5.0-61.2 mg/L) than non-hospitalised patients (median CRP: 4.6 mg/L, IQR: 1.7-11.50 mg/L), and lower median absolute lymphocyte count (1.5×10
3 /µL, IQR: 1.1×103 /µL-2.1×103 /µL, and 1.8×103 /µL, IQR: 1.3×103 /µL-2.4×103 /µL, respectively). Predictors of hospitalisation were increasing age (adjusted OR (AOR): 2.614, 95% CI 1.281 to 5.332 for age between 50 years and 64 years, and AOR: 3.892, 95% CI 1.646 to 9.204 for age ≥65 years), presence of two or more comorbidities (AOR: 2.628; 95% CI 1.802 to 3.832) and presence of symptoms (AOR: 1.982: 95% CI 1.342 to 2.928)., Conclusion: The majority of COVID-19 cases diagnosed in primary healthcare in Qatar were symptomatic. Most cases had normal vital signs and laboratory results at presentation. Predictors of hospitalisation were increasing age, the presence of symptoms and having two or more comorbidities., Competing Interests: Competing interests: None declared., (© Author(s) (or their employer(s)) 2021. Re-use permitted under CC BY-NC. No commercial re-use. See rights and permissions. Published by BMJ.)- Published
- 2021
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21. Primary health care physicians' perspective on COVID-19 pandemic management in Qatar: a web-based survey.
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Ismail M, Joudeh A, Neshnash M, Metwally N, Seif MH, Al Nuaimi A, Alsaadi MM, Al Abdulla S, and Selim NAA
- Subjects
- Cross-Sectional Studies, Female, Humans, Internet, Male, Pandemics, Primary Health Care, Qatar, SARS-CoV-2, Surveys and Questionnaires, COVID-19, Physicians, Primary Care
- Abstract
Objectives: To assess primary care physicians' satisfaction towards COVID-19 pandemic management in Qatar and to identify the associated factors with their satisfaction., Design: A cross-sectional web-based survey conducted from 1 June to 30 July 2020., Setting: All the 27 public primary healthcare centres in Qatar., Participants: 294 primary care physicians working in the publicly run primary healthcare corporation in Qatar., Primary Outcome Measures: Overall satisfaction towards COVID-19 management in Qatar and satisfaction towards each aspect of this management including COVID-19 clinical practice guidelines, psychological support, team dynamics, work safety as well as institutional and governmental regulations., Results: 294 primary care physicians participated in the survey with a response rate of 65%. Overall satisfaction of physicians towards COVID-19 19 management at Primary Health Care Corporation was 77%. The highest satisfaction was towards institutional and governmental support while it was the lowest towards the corporation case definition and management of COVID-19 guidelines. Female physicians were less satisfied with psychological support in comparison to males (64.1% and 51% respectively, p=0.049). Overall satisfaction towards case definition and management of COVID-19 guidelines were strongly correlated with their clarity, updating these guidelines in due time and applicability of the guidelines (r=0.759 P<0.001; r=0.701 P<0.001; r=0.698 P<0.001) respectively, while satisfaction towards work safety was strongly correlated with availability and quality of Personal Protective Equipment provided (r=0.83 P<0.001 and r=0.811 P<0.001 respectively)., Conclusion: Most primary care physicians in Qatar who responded to the survey were satisfied with the COVID-19 guidelines developed rapidly in response to this pandemic. Availability and quality of PPE were a particular concern. The clinicians who were less satisfied were younger and female., Competing Interests: Competing interests: None declared., (© Author(s) (or their employer(s)) 2021. Re-use permitted under CC BY-NC. No commercial re-use. See rights and permissions. Published by BMJ.)
- Published
- 2021
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22. Gastrointestinal parasitic infections of buffaloes (Bubalus bubalis) in Sarawak Borneo: Prevalence, risk factors, and farming practices.
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Harizt AM, Malahubban M, Syed-Hussain SS, Ramanoon SZ, Sadiq MB, Sarbini SR, Hassan MN, Mustafa S, Aziz NAA, Isa NMM, Nating WR, Asut R, and Kamaludeen J
- Subjects
- Animals, Borneo, Buffaloes parasitology, Farms, Malaysia epidemiology, Prevalence, Risk Factors, Animal Husbandry, Gastrointestinal Diseases epidemiology, Gastrointestinal Diseases veterinary, Intestinal Diseases, Parasitic epidemiology, Intestinal Diseases, Parasitic veterinary
- Abstract
The objectives of this study were to investigate the prevalence and associated risk factors for gastrointestinal (GI) parasites in buffaloes from various areas of Sarawak, and to assess current management practices of GI parasites among farmers. Faecal samples were collected from 15 farms and 129 animals, as well as data on farm and animal-based characteristics. A total of 129 faecal samples were examined for GI parasites using a modified McMaster and sedimentation. Association between potential risk factors and the prevalence of GI parasites was investigated using Chi-square statistic. The prevalence of Paramphistomum sp., strongyles, and coccidia were 75.2% (95% CI±7.5), 52.7% (95% CI±8.6) and 48.1% (95% CI±8.6), respectively. Farms which had a grazing area less than 50 acres in size had significantly higher prevalence of strongyles (70.5%, χ
2 = 8.34, P = 0.004) and paramphistomes (88.6%, χ2 = 6.46, P = 0.01) relative to farms with a larger grazing area (43.5% and 68.2%, respectively). Prevalence of strongyles was lower in farms that did not implement a cut- and-carry system (45.6%, χ2 = 4.17, P = 0.04) in comparison to those that did (64%). The prevalence of paramphistomes was higher on farms with more than 40 animals (80.6%, χ2 = 3.18, P = 0.05) relative to farms with fewer animals. The majority of farmers surveyed (67.9%) showed awareness of GI parasite infection and reported that they recognized the associated symptoms. Most farmers practised deworming, and ivermectin was the most commonly used anthelminthic (60.4%); only 1.9% of farmers used albendazole. Overall this study revealed a high prevalence of GI parasites in buffalo in Sarawak. Although farmers report they are aware of parasitic diseases, further education is still required. This could include how they can successfully implement on-farm changes to reduce the prevalence of GI parasites in their herds.- Published
- 2021
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23. Electrocardiogram-Based Emotion Recognition Systems and Their Applications in Healthcare-A Review.
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Hasnul MA, Aziz NAA, Alelyani S, Mohana M, and Aziz AA
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- Algorithms, Delivery of Health Care, Emotions, Humans, Prospective Studies, Artificial Intelligence, Electrocardiography
- Abstract
Affective computing is a field of study that integrates human affects and emotions with artificial intelligence into systems or devices. A system or device with affective computing is beneficial for the mental health and wellbeing of individuals that are stressed, anguished, or depressed. Emotion recognition systems are an important technology that enables affective computing. Currently, there are a lot of ways to build an emotion recognition system using various techniques and algorithms. This review paper focuses on emotion recognition research that adopted electrocardiograms (ECGs) as a unimodal approach as well as part of a multimodal approach for emotion recognition systems. Critical observations of data collection, pre-processing, feature extraction, feature selection and dimensionality reduction, classification, and validation are conducted. This paper also highlights the architectures with accuracy of above 90%. The available ECG-inclusive affective databases are also reviewed, and a popularity analysis is presented. Additionally, the benefit of emotion recognition systems towards healthcare systems is also reviewed here. Based on the literature reviewed, a thorough discussion on the subject matter and future works is suggested and concluded. The findings presented here are beneficial for prospective researchers to look into the summary of previous works conducted in the field of ECG-based emotion recognition systems, and for identifying gaps in the area, as well as in developing and designing future applications of emotion recognition systems, especially in improving healthcare.
- Published
- 2021
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24. Influence of Different Percentages of Binders on the Physico-Mechanical Properties of Rhizophora spp. Particleboard as Natural-Based Tissue-Equivalent Phantom for Radiation Dosimetry Applications.
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Zuber SH, Hashikin NAA, Yusof MFM, Aziz MZA, and Hashim R
- Abstract
Rhizophora spp. particleboard with the incorporation of lignin and soy flour as binders were fabricated and the influence of different percentages of lignin and soy flour (0%, 6% and 12%) on the physico-mechanical properties of the particleboard were studied. The samples were characterised by Fourier transform infrared spectroscopy (FTIR), X-ray diffraction (XRD), scanning electron microscopy (SEM), energy dispersive X-ray (EDX), X-ray fluorescence (XRF) and internal bonding. The results stipulated that the addition of binders in the fabrication of the particleboard did not change the functional groups according to the FTIR spectrum. For XRD, addition of binders did not reveal any major transformation within the composites. SEM and EDX analyses for all percentages of binders added showed no apparent disparity; however, it is important to note that the incorporation of binders allows better bonding between the molecules. In XRF analysis, lower percentage of chlorine in the adhesive-bonded samples may be advantageous in maintaining the natural properties of the particleboard. In internal bonding, increased internal bond strength in samples with binders may indicate better structural integrity and physico-mechanical strength. In conclusion, the incorporation of lignin and soy flour as binders may potentially strengthen and fortify the particleboard, thus, can be a reliable phantom in radiation dosimetry applications.
- Published
- 2021
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25. Characterization of soy-lignin bonded Rhizophora spp. particleboard as substitute phantom material for radiation dosimetric studies - Investigation of CT number, mass attenuation coefficient and effective atomic number.
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Zuber SH, Hashikin NAA, Mohd Yusof MF, Aziz MZA, and Hashim R
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- Databases, Factual, Spectrometry, X-Ray Emission methods, Lignin chemistry, Radiometry methods, Rhizophoraceae chemistry, Glycine max chemistry, Tomography, X-Ray Computed methods
- Abstract
Experimental particleboards are made from Rhizophora spp. wood trunk with three different percentages of lignin and soy flour (0%, 6% and 12%) as adhesives. The objective was to investigate the equivalence of Rhizophora spp. particleboard as phantom material with human soft tissue using Computed Tomography (CT) number. The linear and mass attenuation coefficient of Rhizophora spp. particleboard at low energy range was also explored using X-ray Fluorescence (XRF) configuration technique. Further characterization of the particleboard was performed to determine the effective atomic number, Z
eff using Energy Dispersive X-Ray (EDX) method. Adhesive-bonded Rhizophora spp. particleboard showed close similarities with water, based on the average CT numbers, electron density calibration curve and the analysis of CT density profile, compared to the binderless particleboard. The effective atomic number obtained from the study indicated that the attenuation properties of all the particleboards at different percentages of adhesives were almost similar to water. The mass attenuation coefficient calculated from XRF configuration technique showed good agreement with water from XCOM database, suggesting its potential as phantom material for radiation study., (Copyright © 2021 Elsevier Ltd. All rights reserved.)- Published
- 2021
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26. Preliminary detection of mites and coccidia with their zoonotic potential in meat-farmed rabbits in three districts in Selangor, Malaysia.
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Mohamad-Radzi NN, Che-Amat A, Aziz NAA, Babjee SMA, Mazlan M, Hamid NFS, and Lekko YM
- Abstract
Mites infestation and gastrointestinal parasites including coccidia are common problems reported in pets, petting farms and farmed practices. Sarcoptes sp. and Cheyletiella sp. could be a potential zoonosis from rabbits to human. Detection of mites and coccidia with their zoonotic potential in meat-farmed rabbits from three (3) commercial farms in Selangor were investigated. Tape impression, fur pluck, skin scraping and ear swab tests were used for mites detection and faecal samples was used for coccidia examination by using McMaster's technique and the identification of Eimeria spp. was further analysed by sporulation technique. The overall prevalence of mites and Eimeria spp. (oocysts) in rabbits were 51.85% ± 0.38 (standard deviation; S.D.) and 76.47% ± 0.42 respectively. Sarcoptes scabiei was the most frequent mite found (25.92% ± 0.44), followed by Cheyletiella parasitovorax and Psoroptes cuniculi . Nine Eimeria spp. were identified and the oocysts of E. perforans shows the highest prevalence (64.71% ± 3.97) followed by E. exigua, E. coecicola, E. magna, E. flavescens, E. irresidua, E. intestinalis, E. media and E. stiedai . There was a significant difference ( p = 0.013) where large-scale farm has a higher prevalence of coccidia than small scale farms apparently due to the excessive stocking density as coccidia are easily transmitted among rabbits through ingestion of sporulated oocysts. In conclusion, mites and coccidia are commonly present in the commercial rabbit farms, thus control and preventive measures should be executed to reduce the incidence of parasites. The zoonotic mites Sarcoptes scabiei and Cheyletiella parasitovorax detected in this study could be regarded as a public health concern especially when handling the rabbit., Competing Interests: Conflict of interestThe authors declare that they have no conflict of interest., (© Indian Society for Parasitology 2020.)
- Published
- 2021
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27. Could leptin be responsible for the reproductive dysfunction in obese men?
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Almabhouh F, Abdul Aziz NAA, Durairajanayagam D, and Singh HJ
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- Animals, Humans, Infertility, Male blood, Male, Obesity blood, Reproduction, Infertility, Male etiology, Leptin blood, Obesity complications
- Abstract
Low sperm concentration, increased fraction of morphologically abnormal sperm, and raised levels of markers of oxidative stress are often reported in the seminal plasma of infertile obese males. The precise reason for changes remains unknown. This short review summarises evidence from human and animal studies linking leptin to the reproductive dysfunction reported in obese males and presents a possible mechanism for this based on the available data in the literature. Serum leptin concentrations correlate positively with body fat mass but its precise link to semen abnormalities reported in obese males has yet to be conclusively established. Decreased sperm concentration, increased fraction of morphologically abnormal sperm and increased markers of oxidative stress have been reported following six weeks of daily leptin treatment to normal weight rats. In addition, decreased expression of endogenous antioxidant enzymes and increased expression of respiratory chain enzymes noted in the testes of leptin treated rats increases the propensity to oxidative stress. Besides that, leptin's interference with histone to protamine transition in the DNA of sperm increases the susceptibility of sperm to free radical attack and may explain the often reported higher DNA fragmentation index in sperm of obese males. Concurrent supplementation of melatonin, a natural anti-oxidant, to these rats prevents the effects of leptin. The role of leptin in obesity-related reproductive dysfunction has to be considered seriously and these effects of leptin might involve increased oxidative stress., (Copyright © 2020 Society for Biology of Reproduction & the Institute of Animal Reproduction and Food Research of Polish Academy of Sciences in Olsztyn. Published by Elsevier B.V. All rights reserved.)
- Published
- 2020
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28. Tocotrienol-rich fraction supplementation prevents foetal loss in females mated with corticosterone-treated male Sprague-Dawley rats.
- Author
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Abd Aziz NAA, Chatterjee A, Chatterjee R, and Durairajanayagam D
- Subjects
- Animals, Antioxidants pharmacology, Embryo Implantation drug effects, Female, Male, Malondialdehyde blood, Oxidative Stress drug effects, Rats, Rats, Sprague-Dawley, Testosterone blood, Tocotrienols administration & dosage, Abortion, Veterinary prevention & control, Antioxidants therapeutic use, Corticosterone pharmacology, Reproduction drug effects, Tocotrienols therapeutic use
- Abstract
This study examined whether tocotrienol supplementation to corticosterone-treated male rats could prevent foetal loss in females upon their mating. Epididymides of adult male Sprague-Dawley (SD) rats with proven fertility were surgically separated at the testis-caput junction. Twenty-four hours post-surgery, these animals received for 7 days either: tocopherol-stripped corn oil (Control), corticosterone 25 mg/kg s.c. (CORT), CORT 25 mg/kg s.c. and tocotrienol-rich fraction (TRF) 100 mg/kg orally (CORT + TRF) or TRF 100 mg/kg orally (TRF). On day 8, males were cohabited with proestrus females. A spermatozoa-positive vaginal smear indicated pregnancy. Males were euthanised for analysis of testosterone and antioxidant activities. Reproductive organs were weighed. On day 8 of pregnancy, females were laparotomised to count the number of implantation sites. Pregnancy was continued until term. Number of pups delivered and their weights were determined. Data were analysed using ANOVA. Malondialdehyde levels were significantly lower in CORT + TRF group compared with CORT group. Enzymatic antioxidant activities, testosterone level and reproductive organ weights were significantly higher in CORT + TRF group compared with CORT group. Number of implantation sites and live pups delivered, and their birth weights from females mated with CORT + TRF males were significantly higher compared to CORT group. Therefore, TRF prevents foetal loss in females mated with CORT + TRF-treated males., (© 2018 Blackwell Verlag GmbH.)
- Published
- 2019
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29. LY294002, a PI3K pathway inhibitor, prevents leptin-induced adverse effects on spermatozoa in Sprague-Dawley rats.
- Author
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Md Mokhtar AH, Malik IA, Abd Aziz NAA, Almabhouh FA, Durairajanayagam D, and Singh HJ
- Subjects
- AMP-Activated Protein Kinases antagonists & inhibitors, AMP-Activated Protein Kinases metabolism, Animals, Male, Phosphatidylinositol 3-Kinases metabolism, Proto-Oncogene Proteins c-akt metabolism, Pyrazoles pharmacology, Pyrimidines pharmacology, Rats, Rats, Sprague-Dawley, Testis drug effects, Testis metabolism, Chromones pharmacology, Enzyme Inhibitors pharmacology, Leptin pharmacology, Morpholines pharmacology, Phosphoinositide-3 Kinase Inhibitors, Signal Transduction drug effects, Spermatozoa drug effects
- Abstract
This study examined the effects of PI3K and AMPK signalling pathway inhibitors on leptin-induced adverse effects on rat spermatozoa. Sprague-Dawley rats, aged 14-16 weeks, were randomised into control, leptin-, leptin + dorsomorphin (AMPK inhibitor)-, and leptin+LY294002 (PI3K inhibitor)-treated groups with six rats per group. Leptin was given once daily for 14 days via the intraperitoneal (i.p.) route at a dose of 60 ug kg
-1 body weight. Rats in the leptin and inhibitor-treated groups received concurrently either dorsomorphin (5 mg kg-1 day-1 ) or LY294002 (1.2 mg kg-1 day-1 ) i.p. for 14 days. Controls received 0.1 ml of normal saline. Upon completion, sperm count, sperm morphology, seminiferous tubular epithelial height (STEH), seminiferous tubular diameter (STD), 8-hydroxy-2-deoxyguanosine (8-OHdG) and phospho-Akt/total Akt ratio were estimated. Data were analysed using ANOVA. Sperm count, STEH and STD were significantly lower, while the percentage of spermatozoa with abnormal morphology and the level of 8-OHdG were significantly higher in rats treated with leptin and leptin + dorsomorphin when compared to those in controls and LY294002-treated rats. Testicular phospho-Akt/total Akt ratio was significantly higher in leptin and leptin + LY294002-treated rats. In conclusion, LY294002 prevents leptin-induced changes in rat sperm parameters, suggesting the potential role of the PI3K signalling pathway in the adverse effects of leptin on sperm parameters., (© 2018 Blackwell Verlag GmbH.)- Published
- 2019
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30. Tobacco use among adolescents in Qatar: Findings from Global Youth Tobacco Surveys 2004-2013.
- Author
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Al-Dahshan A, El Zoghbi M, Chehab MAH, Naja S, and Selim NAA
- Abstract
Introduction: Tobacco use has become a global health concern. Almost a third of the adolescents of the Eastern Mediterranean Region (EMR) have reported tobacco use and the percentage is expected to rise in the future, making tobacco consumption a main public health issue among students, 13-15 years old, in the region's countries. We aimed to conduct an analysis of the previous Global Youth Tobacco Surveys (GYTS) in Qatar to detect any significant changes that might inform decision makers on planning policies and interventions accordingly., Methods: This study presents a retrospective data analysis, based on three GYTS conducted in Qatar during 2004, 2007, and 2013. All analyses were weighted to account for the complex survey design and for differential non-response at school, class and student levels, with the exception of the analysis of sociodemographic characteristics. The differences between the proportions were tested by Pearson's chi-squared test. Data were analyzed using the statistical software SPSS (Statistical Package for Social Sciences), version 21.0 (Chicago, IL). A p-value <0.05 was considered to be significant., Results: There was an overall increase in the prevalence of smoking, the accessibility, and the availability of cigarettes. Additionally, the percentage of participants who desired to stop smoking decreased between 2004 and 2013, while that of students who reported 'exposure to free tobacco promotion' was highest in 2013., Conclusions: Despite the effort made by the local authorities in Qatar to reverse the spread or limit the growing tobacco epidemic, there is a need for multidisciplinary interventions through tobacco prevention and control programs targeting youths., Competing Interests: The authors have completed and submitted the ICMJE Form for Disclosure of Potential Conflicts of Interest and none was reported., (© 2019 Al-Dahshan A.)
- Published
- 2019
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31. Marker-assisted selection strategy to pyramid two or more QTLs for quantitative trait-grain yield under drought.
- Author
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Kumar A, Sandhu N, Dixit S, Yadav S, Swamy BPM, and Shamsudin NAA
- Abstract
Background: Marker-assisted breeding will move forward from introgressing single/multiple genes governing a single trait to multiple genes governing multiple traits to combat emerging biotic and abiotic stresses related to climate change and to enhance rice productivity. MAS will need to address concerns about the population size needed to introgress together more than two genes/QTLs. In the present study, grain yield and genotypic data from different generations (F
3 to F8 ) for five marker-assisted breeding programs were analyzed to understand the effectiveness of synergistic effect of phenotyping and genotyping in early generations on selection of better progenies., Results: Based on class analysis of the QTL combinations, the identified superior QTL classes in F3 /BC1 F3 /BC2 F3 generations with positive QTL x QTL and QTL x background interactions that were captured through phenotyping maintained its superiority in yield under non-stress (NS) and reproductive-stage drought stress (RS) across advanced generations in all five studies. The marker-assisted selection breeding strategy combining both genotyping and phenotyping in early generation significantly reduced the number of genotypes to be carried forward. The strategy presented in this study providing genotyping and phenotyping cost savings of 25-68% compared with the traditional marker-assisted selection approach. The QTL classes, Sub1 + qDTY1.1 + qDTY2.1 + qDTY3.1 and Sub1 + qDTY2.1 + qDTY3.1 in Swarna-Sub1, Sub1 + qDTY1.1 + qDTY1.2 , Sub1 + qDTY1.1 + qDTY2.2 and Sub1 + qDTY2.2 + qDTY12.1 in IR64-Sub1, qDTY2.2 + qDTY4.1 in Samba Mahsuri, Sub1 + qDTY3.1 + qDTY6.1 + qDTY6.2 and Sub1 + qDTY6.1 + qDTY6.2 in TDK1-Sub1 and qDTY12.1 + qDTY3.1 and qDTY2.2 + qDTY3.1 in MR219 had shown better and consistent performance under NS and RS across generations over other QTL classes., Conclusion: "Deployment of this procedure will save time and resources and will allow breeders to focus and advance only germplasm with high probability of improved performance. The identification of superior QTL classes and capture of positive QTL x QTL and QTL x background interactions in early generation and their consistent performance in subsequent generations across five backgrounds supports the efficacy of a combined MAS breeding strategy".- Published
- 2018
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32. Relationship between Pb and Cd accumulations in house crow, their habitat, and food content from Klang area, Peninsular Malaysia.
- Author
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Janaydeh M, Ismail A, Omar H, Zulkifli SZ, Bejo MH, and Aziz NAA
- Subjects
- Animals, Birds, Cadmium analysis, Environmental Pollutants analysis, Environmental Pollution statistics & numerical data, Feathers chemistry, Female, Food Chain, Humans, Lead analysis, Malaysia, Male, Metals, Heavy analysis, Soil, Cadmium metabolism, Crows metabolism, Ecosystem, Environmental Monitoring, Environmental Pollutants metabolism, Lead metabolism
- Abstract
Heavy metal pollution has become a global concern due to accumulation in tissue and transferable effects to humans via the food chain. This study focused on monitoring the accumulation of cadmium (Cd) and lead (Pb) in surface soil and body content: bone, heart, brain, liver, lung, muscle, kidney, feathers, feces, and gizzard contents of house crow Corvus splendens in the Klang region, Malaysia. The results revealed the occurrence of Pb and Cd in all biological samples from house crows, food contents, and surface soil samples. Heart and kidney accrued high amounts of Cd, while high amounts of Pb were found to accumulate in bones and feathers. Major discrepancies were also discovered in the concentrations of metals between juvenile and adults, as well as female and male bird samples. Concentrations of Pb and Cd in house crow internal tissues correlated significantly with that of bird feathers, but none could be established with that of surface soil. In addition, a significant correlation was observed between Pb concentration in the internal tissues to that of the feces, but the same was not the case when compared with the surface soil concentration. Metal accrual in the house crows feathers and feces may be through a long-term transmission via the food chain, which are eliminated from feathers via molting. This may suggest the utility of molted breast feathers of house crow in the bio-monitoring of Cd and Pb contamination, whereas feces of house crow appear only to be suitable for the bio-monitoring of Pb contamination.
- Published
- 2017
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33. Association Mapping of Yield and Yield-related Traits Under Reproductive Stage Drought Stress in Rice (Oryza sativa L.).
- Author
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Swamy BPM, Shamsudin NAA, Rahman SNA, Mauleon R, Ratnam W, Sta Cruz MT, and Kumar A
- Abstract
Background: The identification and introgression of major-effect QTLs for grain yield under drought are some of the best and well-proven approaches for improving the drought tolerance of rice varieties. In the present study, we characterized Malaysian rice germplasm for yield and yield-related traits and identified significant trait marker associations by structured association mapping., Results: The drought screening was successful in screening germplasm with a yield reduction of up to 60% and heritability for grain yield under drought was up to 78%. There was a wider phenotypic and molecular diversity within the panel, indicating the suitability of the population for quantitative trait loci (QTL) mapping. Structure analyses clearly grouped the accessions into three subgroups with admixtures. Linkage disequilibrium (LD) analysis revealed that LD decreased with an increase in distance between marker pairs and the LD decay varied from 5-20 cM. The Mixed Linear model-based structured association mapping identified 80 marker trait associations (MTA) for grain yield (GY), plant height (PH) and days to flowering (DTF). Seven MTA were identified for GY under drought stress, four of these MTA were consistently identified in at least two of the three analyses. Most of these MTA identified were on chromosomes 2, 5, 10, 11 and 12, and their phenotypic variance (PV) varied from 5% to 19%. The in silico analysis of drought QTL regions revealed the association of several drought-responsive genes conferring drought tolerance. The major-effect QTLs are useful in marker-assisted QTL pyramiding to improve drought tolerance., Conclusion: The results have clearly shown that structured association mapping is one of the feasible options to identify major-effect QTLs for drought tolerance-related traits in rice.
- Published
- 2017
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34. Qatar steps up to Global Health security: a reflection on the joint external evaluation, 2016.
- Author
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Bala MO, Chehab MA, and Selim NAA
- Abstract
Since the commencement of the International Health Regulations in 2007, global public health security has been faced with numerous emerging and ongoing events. Moreover, the Joint External Evaluation is a voluntary tool developed in compliance with the Global Health Security Agenda that represents the high responsibility of international health community towards the increased incidence of emerging and re-emerging diseases. Against this background, between 29th May and 2nd June 2016, a team of World Health Organization consultants arrived to the State of Qatar to assess, in collaboration with national experts, the country's capacity to prevent, detect, and rapidly respond to threats of public health aspect. They identified areas of strength, weakness, and recommendations for improving national health security of Qatar in anticipation of the 2022 FIFA World Cup event. Qatar has demonstrated a leading role in the region through its commitment to International Health Regulations (2005) and population health. Similarly, the Qatar was the first Arab state and seventh volunteering country globally to undergo the Joint External evaluation process. In this review, we highlighted Qatar's achievements and shortcomings of International Health Regulations' core capacities to inform healthcare professionals and the scientific community about the country's contribution toward global health security.
- Published
- 2017
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35. Systematic investigation on the validity of partition model dosimetry for 90 Y radioembolization using Monte Carlo simulation.
- Author
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Hashikin NAA, Yeong CH, Guatelli S, Abdullah BJJ, Ng KH, Malaroda A, Rosenfeld A, and Perkins AC
- Subjects
- Adult, Humans, Liver Neoplasms radiotherapy, Lung Neoplasms radiotherapy, Radiometry methods, Brachytherapy methods, Liver Neoplasms diagnostic imaging, Lung Neoplasms diagnostic imaging, Monte Carlo Method, Phantoms, Imaging, Radiotherapy Planning, Computer-Assisted methods, Yttrium Radioisotopes therapeutic use
- Abstract
We aimed to investigate the validity of the partition model (PM) in estimating the absorbed doses to liver tumour ([Formula: see text]), normal liver tissue ([Formula: see text]) and lungs ([Formula: see text]), when cross-fire irradiations between these compartments are being considered. MIRD-5 phantom incorporated with various treatment parameters, i.e. tumour involvement (TI), tumour-to-normal liver uptake ratio (T/N) and lung shunting (LS), were simulated using the Geant4 Monte Carlo (MC) toolkit. 10
8 track histories were generated for each combination of the three parameters to obtain the absorbed dose per activity uptake in each compartment ([Formula: see text], [Formula: see text], and [Formula: see text]). The administered activities, A were estimated using PM, so as to achieve either limiting doses to normal liver, [Formula: see text] or lungs, [Formula: see text] (70 or 30 Gy, respectively). Using these administered activities, the activity uptake in each compartment ([Formula: see text], [Formula: see text], and [Formula: see text]) was estimated and multiplied with the absorbed dose per activity uptake attained using the MC simulations, to obtain the actual dose received by each compartment. PM overestimated [Formula: see text] by 11.7% in all cases, due to the escaped particles from the lungs. [Formula: see text] and [Formula: see text] by MC were largely affected by T/N, which were not considered by PM due to cross-fire exclusion at the tumour-normal liver boundary. These have resulted in the overestimation of [Formula: see text] by up to 8% and underestimation of [Formula: see text] by as high as -78%, by PM. When [Formula: see text] was estimated via PM, the MC simulations showed significantly higher [Formula: see text] for cases with higher T/N, and LS ⩽ 10%. All [Formula: see text] and [Formula: see text] by MC were overestimated by PM, thus [Formula: see text] were never exceeded. PM leads to inaccurate dose estimations due to the exclusion of cross-fire irradiation, i.e. between the tumour and normal liver tissue. Caution should be taken for cases with higher TI and T/N, and lower LS, as they contribute to major underestimation of [Formula: see text]. For [Formula: see text], a different correction factor for dose calculation may be used for improved accuracy.- Published
- 2017
- Full Text
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36. Aptamer Technology: Adjunct Therapy for Malaria.
- Author
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Nik Kamarudin NAA, Mohammed NA, and Mustaffa KMF
- Abstract
Malaria is a life-threatening parasitic infection occurring in the endemic areas, primarily in children under the age of five, pregnant women, and patients with human immunodeficiency virus and acquired immunodeficiency syndrome (HIV)/(AIDS) as well as non-immune individuals. The cytoadherence of infected erythrocytes (IEs) to the host endothelial surface receptor is a known factor that contributes to the increased prevalence of severe malaria cases due to the accumulation of IEs, mainly in the brain and other vital organs. Therefore, further study is needed to discover a new potential anti-adhesive drug to treat severe malaria thus reducing its mortality rate. In this review, we discuss how the aptamer technology could be applied in the development of a new adjunct therapy for current malaria treatment.
- Published
- 2017
- Full Text
- View/download PDF
37. Pyramiding of drought yield QTLs into a high quality Malaysian rice cultivar MRQ74 improves yield under reproductive stage drought.
- Author
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Shamsudin NAA, Swamy BPM, Ratnam W, Sta Cruz MT, Sandhu N, Raman AK, and Kumar A
- Abstract
Background: With the objective of improving the grain yield (GY) of the Malaysian high quality rice cultivar MRQ74 under reproductive stage drought stress (RS), three drought yield QTLs, viz. qDTY 2.2, qDTY 3.1 , and qDTY 12.1 were pyramided by marker assisted breeding (MAB). Foreground selection using QTL specific markers, recombinant selection using flanking markers, and background selections were performed in every generation. BC1F3 derived pyramided lines (PLs) with different combinations of qDTY 2.2, qDTY 3.1 , and qDTY 12.1 were evaluated under both RS and non-stress (NS) during the dry season (DS) of 2013 and 2014 at IRRI., Results: The GY reductions in RS trials compared to NS trials ranged from 79 to 99 %. Plant height (PH) was reduced and days to flowering (DTF) was delayed under RS. Eleven BC1F5 MRQ74 PLs with yield advantages of 1009 to 3473 kg ha(-1) under RS and with yields equivalent to MRQ74 under NS trials were identified as promising drought tolerance PLs. Five best PLs, IR 98010-126-708-1-4, IR 98010-126-708-1-3, IR 98010-126-708-1-5, IR 99616-44-94-1-1, and IR 99616-44-94-1-2 with a yield advantage of more than 1000 kg ha(-1) under RS and with yield potential equivalent to that of MRQ74 under NS were selected. The effect of three drought grain yield QTLs under RS in MRQ74 was validated. Under NS, PLs with two qDTY combinations (qDTY 2.2 + qDTY 12.1 ) performed better than PLs with other qDTY combinations, indicating the presence of a positive interaction between qDTY 2.2 and qDTY 12.1 in the MRQ74 background., Conclusion: Drought tolerant MRQ74 PLs with a yield advantage of more than 1000 kg ha(-1) under RS were developed. Differential yield advantages of different combinations of the qDTYs indicate a differential synergistic relationship among qDTYs.
- Published
- 2016
- Full Text
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