38 results on '"Barbara Denys"'
Search Results
2. The Use of lithium in psychiatric, viral and neurological disorders - a review
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Barbara Denys, Karolina Góra, Wojciech Zdziennicki, Patryk Zimnicki, Marta Lato, Konrad Iberszer, Maria Litwiniuk, Marcin Zaniuk, Kamil Hurkała, and Dominika Antonik
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lithium ,bipolar disorder ,mania ,depression ,suicidal risk ,side effects ,Education ,Sports ,GV557-1198.995 ,Medicine - Abstract
Introduction: Lithium is one of the longest used drugs in psychiatry and is currently a mainstay in the long-term prophylaxis of bipolar disorder, preventing recurrent manic and depressive episodes. It also remains an important drug in the treatment of acute episodes of mania and depression. Out of the normothymic drugs, lithium has the greatest effect in preventing suicidal behavior. It also exhibits antiviral activity and in recent years evidence has also accumulated of the drug's neuroprotective properties. Aim of the study: The aim was to collect and analyze publications on the use of lithium in affective disorders, dementia and viral diseases, as well as its effect on reducing suicidal tendencies. Materials and Methods: The literature available in the PubMed database was reviewed, using the key words: "lithium"; "bipolar disorder"; "mania", "depression"; "suicidal risk", "side effects". Results: Chronic use of lithium in patients with bipolar disorder has an effect on preventing recurrence of manic and depressive episodes and can successfully last for 40 years or longer. Studies support the theory that long-term lithium pharmacotherapy has a significant impact on preventing suicidal tendencies among patients with affective disorders. In recent years, the antiviral and neuroprotective properties of the drug have also become known. Despite the rather high risk of overdose, as well as the occurrence of numerous side effects, lithium is still very often used in the treatment of affective disorders due to its high efficacy. Conclusions: Lithium has been one of the mainstays of psychopharmacology for several decades and is a precursor to mood-stabilizing drugs. In recent years evidence has also been collected for its potential use in non-psychiatric conditions. Conducting further research on lithium will certainly allow for wider use of the drug and a more thorough understanding of its mechanism of action.
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- 2023
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3. The Genetic risk of asthma: a review of reports on the effect of single nucleotide polymorphisms detected by genome-wide association study on the development and course of asthma using the genes: ORMDL3, ADAM33, DENND1B as examples
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Marcin Zaniuk, Kamil Hurkała, Dominika Antonik, Barbara Denys, Karolina Góra, Wojciech Zdziennicki, Patryk Zimnicki, Marta Lato, Konrad Iberszer, and Maria Litwiniuk
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asthma ,SNP ,GWAS ,ORMDL3 ,ADAM33 ,DENND1B ,Education ,Sports ,GV557-1198.995 ,Medicine - Abstract
Asthma, an inflammatory disease of the lower and upper airways, is one of the most common diseases in society. Depending on the source and the population studied, the percentage of asthma patients ranges from 5% to as high as 15%. The development of asthma is believed to be caused by an overlap between the body's personal propensity to develop the disease and environmental factors. For years, scientists have been studying the genetic basis of asthma. For several years they have had a new weapon in their arsenal - the GWAS method. The use of this method has enabled researchers to discover the relationship between gene variants found in patients and an increased risk of developing asthma.
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- 2023
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4. The impact of ultraviolet radiation on the skin and the role of photoprotection – the review of the literature
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Dominika Antonik, Barbara Denys, Karolina Góra, Wojciech Zdziennicki, Patryk Zimnicki, Marta Lato, Konrad Iberszer, Maria Litwiniuk, Marcin Zaniuk, and Kamil Hurkała
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ultraviolet radiation ,sunscreen ,sun protection factor ,photodamage ,photoprotection ,photoaging ,Education ,Sports ,GV557-1198.995 ,Medicine - Abstract
Introduction and objective: The sun emits ultraviolet radiation in the UV-A, UV-B and UV-C ranges. Photoprotection is used to prevent the impact of this radiation on the skin. It effectively counteracts photoaging, photodermatoses and photocarcinogenesis. The aim of the study is to discuss the impact of UV radiation on the skin and the role of sun protection, also in special groups of patients - children and non-immunocompetent people. The article also presents a summary of data on the effect of sunscreens on vitamin D synthesis. Materials and methods: The literature was reviewed in the Pubmed, Google Scholar database and in the recommendations of the Polish Dermatological Society with the use of keywords. State of knowledge: Erythema is the most visible effect of sunburn, but exposure to UV radiation is primarily photocarcinogenesis or photoimmunosuppression. The SPF factor is the main determinant of the effectiveness of sunscreens, but effective protection against both UVB and UVA radiation is essential. Daily use of sunscreen reduces skin damage associated with exposure to light and does not negatively affect vitamin D synthesis. Conclusions: The basis of skin protection is using sunscreens, avoiding excessive exposure to solar radiation and using protective clothing, hats and sunglasses. Thanks to these activities, we can significantly reduce the number of cases of certain skin cancers. It is also important to remember that sun protection applies to everyone, especially children and non-immunocompetent people.
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- 2023
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5. Influence of social media on the fight against COVID-19 pandemic – literature review
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Konrad Iberszer, Maria Litwiniuk, Marcin Zaniuk, Kamil Hurkała, Dominika Antonik, Barbara Denys, Karolina Góra, Wojciech Zdziennicki, Patryk Zimnicki, and Marta Lato
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COVID-19 ,social media ,pandemic ,Vaccine Hesistancy ,Mental Health ,Education ,Sports ,GV557-1198.995 ,Medicine - Abstract
Introduction and purpose of the study: COVID-19 is a respiratory illness resulting from infection with the second coronavirus of Severe Acute Respiratory Syndrome, SARS-CoV-2. Lack of knowledge about the virus and fear of infection made it challenging for the media to communicate clearly and effectively about health risks. The purpose of our work was to discuss and summarize reports on this topic available in the literature in such a way as to increase the chances of effective and safe use of media messages in future emergencies. Current state of knowledge: During the pandemic, social networks were used to post information about potential health risks. Social media played a large role in the education process, both for schools and for volunteers or health care workers. However, it is important to keep in mind that the way information is spread on social media can be overwhelming for many health care workers. In addition, regular exposure to social media correlated with high odds of anxiety and depression. False reports about COVID - 19 vaccines undermined public confidence in vaccination especially during the period when the vaccines were introduced for distribution. Summary: Social media was one of the main sources of information after the pandemic outbreak. Thanks to platforms such as Twitter, it was possible to find relevant information from reliable authors. However, the phenomenon of infodemia should not be underestimated. Disinformation and conspiracy theories can have a negative impact on mental health. It is therefore crucial to understand the mechanisms and improve the systems that manage the flow of information.
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- 2023
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6. Helicobacter pylori treatment - a review
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Kamil Hurkała, Dominika Antonik, Barbara Denys, Karolina Góra, Wojciech Zdziennicki, Patryk Zimnicki, Konrad Iberszer, Maria Litwiniuk, and Marcin Zaniuk
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Helicobacter pylori ,treatment ,therapy ,eradication ,proton pump inhibitors ,antibiotics ,Education ,Sports ,GV557-1198.995 ,Medicine - Abstract
In this review, current methods of treating Helicobacter pylori bacterial infection are discussed. H. pylori is one of the most common pathogens causing gastrointestinal discomfort. It is considered a major cause of peptic ulcer disease, stomach and duodenal cancer, and MALT lymphoma. The authors analyzed the results of clinical studies regarding the efficacy of various treatment regimens, such as quadruple therapy, triple therapy, therapy with probiotics, therapy with the addition of phytochemical compounds, and therapy with a single drug. In addition, indications for eradication therapy were discussed. The conclusions of the review indicate the need for an individualized approach to the treatment of H. pylori infection, taking into account the rapidly increasing antibiotic resistance and patient risk factors for eradication.
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- 2023
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7. Treatment of small intestinal bacterial overgrowth: Conventional antibiotic therapy and alternative therapy - probiotics and low FODMAP diet
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Maria Litwiniuk, Marcin Zaniuk, Kamil Hurkała, Dominika Antonik, Barbara Denys, Karolina Góra, Wojciech Zdziennicki, Patryk Zimnicki, Marta Lato, and Konrad Iberszer
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SIBO ,small intestinal bacterial overgrowth syndrome ,rifaximin ,probiotics ,lowFODMAP diet ,Education ,Sports ,GV557-1198.995 ,Medicine - Abstract
Introduction and purpose of the study: Small intestinal bacterial overgrowth syndrome (SIBO) is a syndrome characterized by an increased number of bacteria in the small intestine. The condition causes many non-specific symptoms such as diarrhea, abdominal pain and bloating. The purpose of this study is to review the current knowledge regarding treatment options for SIBO. Methodology: A literature review was conducted based on PubMed, GoogleScholar databases and American College of Gastroenterology (ACG) guidelines. Current knowledge: SIBO is a heterogeneous syndrome. Symptoms of bacterial overgrowth include bloating, abdominal pain and abnormal bowel motility. In more severe cases, patients may experience malabsorption leading to weight loss and malnutrition. SIBO can occur in healthy individuals, but very often accompanies other conditions. The primary test for diagnosis is non-invasive lactulose or glucose breath tests. For treatment, the antibiotic rifaximin is preferred. It exhibits a broad spectrum of activity and a low toxicity profile. Treatment may also include diet therapy and the use of probiotics. Summary: SIBO continues to be both a diagnostic and therapeutic problem. Effective treatment includes not only elimination of the bacteria but also treatment of predisposing conditions. Conclusions of the study show a positive effect of rifaximin on the reduction of SIBO symptoms and improvement of patients' quality of life. The use of certain probiotics has a proven effect. According to the currently available literature, the effectiveness of the low-FODMAP diet in SIBO is hypothetical and further studies are needed to unequivocally confirm its efficacy.
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- 2023
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8. The use of SGLT2 inhibitors in the treatment of cognitive disorders
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Marta Lato, Konrad Iberszer, Maria Litwiniuk, Marcin Zaniuk, Kamil Hurkała, Dominika Antonik, Barbara Denys, Karolina Góra, Wojciech Zdziennicki, and Patryk Zimnicki
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SGLT2 inhibitors ,type 2 diabetes mellitus ,neuroprotection ,oxidative stress ,mTOR ,Alzheimer disease ,Education ,Sports ,GV557-1198.995 ,Medicine - Abstract
Background:Dementia is a progressive and irreversible disease entity that affects memory, verbal fluency, thinking and the performance of daily activities.The most common type of dementia is alzheimer's disease(AD).Currently, there are no specific therapies with established efficacy against cognitive decline or AD. Objective:The aim of this study is to summarize the current knowledge about the effectiveness of SGLT2 inhibitors(SGLT2i) in the treatment of cognitive disorders. Method and material:The article was created based on the PubMed database and the Polish Journal of Endocrinology.Articles were searched in English using the following keywords: SGLT2ihibitors;dementia;Alzheimer type 3 diabetes mellitus. State of knowledge:Patients with type 2 diabetes (TD2) are 1.5-2 times more likely to develop dementia than the general population.Dementia among diabetic patients is characterized by an earlier age of onset, slightly worse overall cognitive status and a higher prevalence of cognitive impairment in male patients.Diabetes and pre-diabetes shorten the time from the onset of mild cognitive impairment (MCI) to the development of full-blown dementia. Conclusions:The use of SGLT2i is associated with reduced mortality from dementia, in contrast to insulin and sulfonylurea derivatives.SGLT2 inihibitors prevent cognitive impairment more potently than dipeptidylpeptidase-4 inhibitors. Taking empagliflozin for one month, is associated with improved cognitive function and increased scores on the Montreal Cognitive Assessment scale.
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- 2023
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9. The use of adrenaline in cardiac arrest - impact on survival to discharge from the hospital
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Patryk Zimnicki, Marta Lato, Konrad Iberszer, Maria Litwiniuk, Marcin Zaniuk, Kamil Hurkała, Dominika Antonik, Barbara Denys, Karolina Góra, and Wojciech Zdziennicki
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adrenaline ,cardiac arrest ,resuscitation ,rosc ,epinephrine ,cpr ,Education ,Sports ,GV557-1198.995 ,Medicine - Abstract
Introduction and objective: Epinephrine is the most important and primary drug that resuscitation team use to reverse cardiac arrest. The provision of epinephrine is currently suggested by both the American Heart Association and the European Resuscitation Council. It is vital to improving the return of spontaneous circulation (ROSC), however the evidence for the use of adrenaline in resuscitation is inconclusive. Materials and methods: The literature was reviewed in the Pubmed database, in the Via Medica Journals database, and in the guidelines of the Polish Society of Anesthesiology, European Resuscitation Council and the American Heart Association with the use of keywords. State of knowledge: There is a clear evidence of an association between epinephrine and increased return of spontaneous circulation (ROSC). Its action is based on stimulation of alpha- and beta-adrenergic receptors. Epinephrine have a role in resuscitation, during CPR it increases the probability of restoring cardiac activity with pulses, which is intermediate step toward long-term survival. However, there are conflicting results regarding long-term survival and functional recovery, particularly neurological outcome. Conclusions: Research shows that epinephrine administration in patients with cardiac arrest increases the chance of restoring spontaneous circulation and patient survival to hospital admission and discharge. However, there are arguments questioning the validity of using epinephrine in resuscitation. Publications show that the compound contributes to post-resuscitation syndrome, which reduces a patient's chance of long-term survival. There are a number of conflicting studies that vary widely in the results presented. The current evidence is insufficient to either confirm or exclude the efficacy of epinephrine, which is why it is still recommended in the latest resuscitation guidelines by the European Resuscitation Council (ERC 2021) and the American Heart Association (AHA 2020).
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- 2023
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10. Major HIV vaccine candidates
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Wojciech Zdziennicki, Patryk Zimnicki, Marta Lato, Konrad Iberszer, Maria Litwiniuk, Marcin Zaniuk, Kamil Hurkała, Dominika Antonik, Barbara Denys, and Karolina Góra
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Human immunodeficiency virus HIV ,acquired immunodeficiency syndrome (AIDS) ,vaccine ,Education ,Sports ,GV557-1198.995 ,Medicine - Abstract
Introduction and objective: Human immunodeficiency virus (HIV) is a virus, which is responsible for an acquired immunodeficiency syndrome (AIDS). This pathogen is widespread worldwide causing a pandemic that has been going on for decades. Researches around the world are trying to end this situation and it seems that the greatest hope lies in finding an effective vaccine. It is important due to the fact that AIDS and its consequences are responsible even nowadays for death of many people infected around the world. The aim of this study was to provide the most important information about major HIV vaccine trials and efficacy of vaccine candidates. Materials and methods: For the purposes of writing this article, the available literature was reviewed. The database of medical publications – Pubmed datebase and other publicaly available books, database and online sites was searched, with the use of keywords such as HIV, HIV vaccine, HIV epidemiology. State of knowledge: According to review studies HIV vaccine trials has been going for 4 decades. Over 250 trials has been conducted since then, but unfortunately, none of them resulted in effective vaccine. The difficulties of this task are mainly connected with the nature of HIV virus. To date, one study has shown some effectiveness, but not enough to claim success. Other studies are ongoing around the world and more are planned. Conclusions: Developing an effective HIV vaccine is the clue to solving the problem, which is new HIV infections. Further researches, further research funding and international cooperation are needed to end this pandemic.
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- 2023
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11. Inflammatory bowel diseases in pregnant women - current state of knowledge
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Karolina Góra, Wojciech Zdziennicki, Patryk Zimnicki, Marta Lato, Konrad Iberszer, Maria Litwiniuk, Marcin Zaniuk, Kamil Hurkała, Dominika Antonik, and Barbara Denys
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inflammatory bowel disease (IBD) ,IBD ,Pregnancy ,Crohn's disease ,ulcerative colitis (UC) ,Education ,Sports ,GV557-1198.995 ,Medicine - Abstract
Introduction and objective: Inflammatory bowel diseases (IBD) are a group of chronic inflammatory diseases. Usually they affect young people, often during pregnancy. Insufficient knowledge about the evolution of the disease during pregnancy, as well as the effects of drugs used, often result in resignation from motherhood, while unfamiliarity with the principles of therapy or discontinuation of treatment during pregnancy are significant causes of obstetric failures. The aim of the study was to summarize the data available in the literature as well as recent reports, to enable a better understanding of the disease and care of pregnant women with IBD. Materials and methods: The literature was reviewed in the Pubmed database, in the Via Medica Journals database, and in the guidelines of the Polish Society of Gastroenterology with the use of keywords. State of knowledge: 85% of women with IBD become pregnant without complications, but the inflammation has a negative impact on both the course of pregnancy and the fetus itself. Complications, which often depend on the activity of the disease before and during pregnancy, may occur: i.e. premature birth, inadequate fetal weight, miscarriage, as well as complications in the child itself and flares of the underlying disease. Therefore, it is important to know rules of safe pharmacotherapy that apply before and after pregnancy in order to prevent the negative effects of the disease. Special situations caused by IBD, i.e. surgical or endoscopic procedures, can be successfully performed in pregnant patients with the observance of certain rules. Conclusions: Understanding the causes of complications that may occur in the patient and the child allows them to be prevented. Both for the mother's health and for a positive course of pregnancy, education and pregnancy planning, preceded by the change of medications to safe for the fetus, are extremely important.
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- 2023
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12. Technical Aspects of Flow Cytometry-based Measurable Residual Disease Quantification in Acute Myeloid Leukemia: Experience of the European LeukemiaNet MRD Working Party
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Jesse M. Tettero, Sylvie Freeman, Veit Buecklein, Adriano Venditti, Luca Maurillo, Wolfgang Kern, Roland B. Walter, Brent L. Wood, Christophe Roumier, Jan Philippé, Barbara Denys, Jeffrey L. Jorgensen, Marie C. Bene, Francis Lacombe, Adriana Plesa, Monica L. Guzman, Agnieszka Wierzbowska, Anna Czyz, Lok Lam Ngai, Adrian Schwarzer, Costa Bachas, Jacqueline Cloos, Marion Subklewe, Michaela Fuering-Buske, and Francesco Buccisano
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Diseases of the blood and blood-forming organs ,RC633-647.5 - Abstract
Measurable residual disease (MRD) quantified by multiparameter flow cytometry (MFC) is a strong and independent prognostic factor in acute myeloid leukemia (AML). However, several technical factors may affect the final read-out of the assay. Experts from the MRD Working Party of the European LeukemiaNet evaluated which aspects are crucial for accurate MFC-MRD measurement. Here, we report on the agreement, obtained via a combination of a cross-sectional questionnaire, live discussions, and a Delphi poll. The recommendations consist of several key issues from bone marrow sampling to final laboratory reporting to ensure quality and reproducibility of results. Furthermore, the experiences were tested by comparing two 8-color MRD panels in multiple laboratories. The results presented here underscore the feasibility and the utility of a harmonized theoretical and practical MFC-MRD assessment and are a next step toward further harmonization.
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- 2022
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13. TARP is an immunotherapeutic target in acute myeloid leukemia expressed in the leukemic stem cell compartment
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Barbara Depreter, Karin E. Weening, Karl Vandepoele, Magnus Essand, Barbara De Moerloose, Maria Themeli, Jacqueline Cloos, Diana Hanekamp, Ine Moors, Inge D’hont, Barbara Denys, Anne Uyttebroeck, An Van Damme, Laurence Dedeken, Sylvia Snauwaert, Glenn Goetgeluk, Stijn De Munter, Tessa Kerre, Bart Vandekerckhove, Tim Lammens, and Jan Philippé
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Diseases of the blood and blood-forming organs ,RC633-647.5 - Abstract
Immunotherapeutic strategies targeting the rare leukemic stem cell compartment might provide salvage to the high relapse rates currently observed in acute myeloid leukemia (AML). We applied gene expression profiling for comparison of leukemic blasts and leukemic stem cells with their normal counterparts. Here, we show that the T-cell receptor γ chain alternate reading frame protein (TARP) is over-expressed in de novo pediatric (n=13) and adult (n=17) AML sorted leukemic stem cells and blasts compared to hematopoietic stem cells and normal myeloblasts (15 healthy controls). Moreover, TARP expression was significantly associated with a fms-like tyrosine kinase receptor-3 internal tandem duplication in pediatric AML. TARP overexpression was confirmed in AML cell lines (n=9), and was found to be absent in B-cell acute lymphocytic leukemia (n=5) and chronic myeloid leukemia (n=1). Sequencing revealed that both a classical TARP transcript, as described in breast and prostate adenocarcinoma, and an AML-specific alternative TARP transcript, were present. Protein expression levels mostly matched transcript levels. TARP was shown to reside in the cytoplasmic compartment and showed sporadic endoplasmic reticulum co-localization. TARP-T-cell receptor engineered cytotoxic T-cells in vitro killed AML cell lines and patient leukemic cells co-expressing TARP and HLA-A*0201. In conclusion, TARP qualifies as a relevant target for immunotherapeutic T-cell therapy in AML.
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- 2020
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14. Clinical Significance of TARP Expression in Pediatric Acute Myeloid Leukemia
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Barbara Depreter, Barbara De Moerloose, Karl Vandepoele, Anne Uyttebroeck, An Van Damme, Barbara Denys, Laurence Dedeken, Marie-Françoise Dresse, Jutte Van der Werff Ten Bosch, Mattias Hofmans, Tessa Kerre, Bart Vandekerckhove, Jan Philippé, and Tim Lammens
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Diseases of the blood and blood-forming organs ,RC633-647.5 - Published
- 2020
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15. The YPEL5–PPP1CB fusion transcript is detected in different hematological malignancies and in normal samples
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Karl Vandepoele, Jan Philippé, and Barbara Denys
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Chronic lymphocytic leukemia ,YPEL5–PPP1CB ,Trans-splicing ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Chronic lymphocytic leukemia (CLL) is the most frequent leukemia in Western adults. It was suggested that transcripts from a reciprocal trans-splicing event between YPEL5 and PPP1CB were present exclusively in CLL patients (more than 90%). Here we show that the YPEL5–PPP1CB fusion is not specific for CLL but is also detected in other hematological malignancies such as chronic myeloid leukemia, monoclonal B cell lymphocytosis or acute leukemia and also in normal samples. As such, it is unlikely that the YPEL5–PPP1CB fusion is a good drug target in CLL or a suitable target to monitor disease.
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- 2015
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16. Clinical and biological characterization of patients with low (0.1–2%) JAK2V617F allele burden at diagnosis
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Eric Lippert, Olivier Mansier, Marina Migeon, Barbara Denys, Asa Nilsson, Carolina Rosmond, Laurence Lodé, Valérie Ugo, Axelle Lascaux, Beatriz Bellosillo, Joaquin Martinez-Lopez, Dina Naguib, Nathalie Gachard, Nicolas Maroc, and Sylvie Hermouet
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Diseases of the blood and blood-forming organs ,RC633-647.5 - Published
- 2014
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17. use of adrenaline in cardiac arrest - impact on survival to discharge from the hospital
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Patryk Zimnicki, Marta Lato, Konrad Iberszer, Maria Litwiniuk, Marcin Zaniuk, Kamil Hurkała, Dominika Antonik, Barbara Denys, Karolina Góra, and Wojciech Zdziennicki
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General Medicine - Abstract
Introduction and objective: Epinephrine is the most important and primary drug that resuscitation team use to reverse cardiac arrest. The provision of epinephrine is currently suggested by both the American Heart Association and the European Resuscitation Council. It is vital to improving the return of spontaneous circulation (ROSC), however the evidence for the use of adrenaline in resuscitation is inconclusive. Materials and methods: The literature was reviewed in the Pubmed database, in the Via Medica Journals database, and in the guidelines of the Polish Society of Anesthesiology, European Resuscitation Council and the American Heart Association with the use of keywords. State of knowledge: There is a clear evidence of an association between epinephrine and increased return of spontaneous circulation (ROSC). Its action is based on stimulation of alpha- and beta-adrenergic receptors. Epinephrine have a role in resuscitation, during CPR it increases the probability of restoring cardiac activity with pulses, which is intermediate step toward long-term survival. However, there are conflicting results regarding long-term survival and functional recovery, particularly neurological outcome. Conclusions: Research shows that epinephrine administration in patients with cardiac arrest increases the chance of restoring spontaneous circulation and patient survival to hospital admission and discharge. However, there are arguments questioning the validity of using epinephrine in resuscitation. Publications show that the compound contributes to post-resuscitation syndrome, which reduces a patient's chance of long-term survival. There are a number of conflicting studies that vary widely in the results presented. The current evidence is insufficient to either confirm or exclude the efficacy of epinephrine, which is why it is still recommended in the latest resuscitation guidelines by the European Resuscitation Council (ERC 2021) and the American Heart Association (AHA 2020).
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- 2023
- Full Text
- View/download PDF
18. use of SGLT2 inhibitors in the treatment of cognitive disorders
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Marta Lato, Konrad Iberszer, Maria Litwiniuk, Marcin Zaniuk, Kamil Hurkała, Dominika Antonik, Barbara Denys, Karolina Góra, Patryk Zimnicki, and Wojciech Zdziennicki
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General Medicine - Abstract
Background:Dementia is a progressive and irreversible disease entity that affects memory, verbal fluency, thinking and the performance of daily activities.The most common type of dementia is alzheimer's disease(AD).Currently, there are no specific therapies with established efficacy against cognitive decline or AD.Objective:The aim of this study is to summarize the current knowledge about the effectiveness of SGLT2 inhibitors(SGLT2i) in the treatment of cognitive disorders.Method and material:The article was created based on the PubMed database and the Polish Journal of Endocrinology.Articles were searched in English using the following keywords: SGLT2ihibitors;dementia;Alzheimer type 3 diabetes mellitus.State of knowledge:Patients with type 2 diabetes (TD2) are 1.5-2 times more likely to develop dementia than the general population.Dementia among diabetic patients is characterized by an earlier age of onset, slightly worse overall cognitive status and a higher prevalence of cognitive impairment in male patients.Diabetes and pre-diabetes shorten the time from the onset of mild cognitive impairment (MCI) to the development of full-blown dementia.Conclusions:The use of SGLT2i is associated with reduced mortality from dementia, in contrast to insulin and sulfonylurea derivatives.SGLT2 inihibitors prevent cognitive impairment more potently than dipeptidylpeptidase-4 inhibitors. Taking empagliflozin for one month, is associated with improved cognitive function and increased scores on the Montreal Cognitive Assessment scale.
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- 2023
- Full Text
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19. Systemic mastocytosis with myeloid sarcoma and B-CLL: molecular and clonal heterogeneity in a rare case of SM-AHN with review of literature
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Philippe Decruyenaere, Dominiek Mazure, Ine Moors, Jo Van Dorpe, Malaïka Van der Linden, Barbara Denys, Mattias Hofmans, and Fritz Offner
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MIDOSTAURIN ,ABNORMALITIES ,DISORDERS ,KIT MUTATION ,General Medicine ,ADULTS ,Systemic mastocytosis ,DIAGNOSIS ,cytogenetics ,SM-AHN ,D816V ,myeloid sarcoma ,CELL LINEAGE DISEASES ,MANAGEMENT ,MAST-CELLS ,case-report - Abstract
Background Systemic mastocytosis (SM) is a rare myeloproliferative disease that results from a clonal proliferation of abnormal mast cells in one or more extra-cutaneous organs. Systemic mastocytosis with an associated hematological neoplasm (SM-AHN) is the second most common subgroup and is diagnosed when WHO criteria for both SM and a hematological neoplasm of non-mast cell lineage are met. The SM-AHN category as currently proposed is highly heterogeneous in terms of pathogenesis, clinical presentation, and prognosis. Case presentation We present the first reported case of SM-AHN associated with two hematological malignancies of different lineages, a monocytic myeloid sarcoma and a B-cell chronic lymphatic leukemia. Cytogenetic and molecular analyses revealed a distinct clonal origin of the two associated malignancies. The SM-myeloid sarcoma clone demonstrated an abnormal karyotype, trisomy 8 and del(13)(q12.3q14.3), as well as mutations in KITD816V, DNMT3A and RUNX1. The DNMT3A mutation could be detected years before disease onset, supporting its potential role as early driver of leukemogenesis. No genetic aberrations could be identified in the CLL clone, which is assumed to present coincidentally. Conclusions This report highlights the importance of full diagnostic work-up in SM patients in whom an associated hematological malignancy is suspected. Moreover, the importance of genetic analysis is highlighted, as it provides additional insights in the underlying clonal pathogenesis of different phenotypes, can aid in risk stratification, and may help identify potential therapy targets.
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- 2023
20. Development of chronic myeloid leukemia in a patient previously diagnosed with a JAK2-positive myeloproliferative neoplasm
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Nadine Van Roy, Karl Vandepoele, Barbara Denys, Timothy Ghys, Eva Steel, Marjan Petrick, Simon Degandt, Henk Louagie, and Sander De Bruyne
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essential ,business.industry ,Essential thrombocythemia ,myeloproliferative neoplasm ,Biochemistry (medical) ,Clinical Biochemistry ,Myeloid leukemia ,General Medicine ,thrombocythemia ,medicine.disease ,BCR-ABL1 ,Bcr abl1 ,JAK2 ,chronic myeloid leukemia ,Medicine and Health Sciences ,Cancer research ,Medicine ,business ,Myeloproliferative neoplasm - Published
- 2021
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21. Deciphering molecular heterogeneity in pediatric AML using a cancer vs. normal transcriptomic approach
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Marie-Françoise Dresse, An Van Damme, Barbara Depreter, Tim Lammens, Barbara De Moerloose, Barbara Denys, Mattias Hofmans, Jutte van der Werff ten Bosch, Anne Uyttebroeck, Eva Terras, Karl Vandepoele, Jan Philippé, Laurence Dedeken, Clinical sciences, Clinical Biology, Growth and Development, Pediatrics, UCL - SSS/IREC/PEDI - Pôle de Pédiatrie, and UCL - (SLuc) Service d'hématologie et d'oncologie pédiatrique
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Male ,Adolescent ,medicine.medical_treatment ,medicine.disease_cause ,Targeted therapy ,Transcriptome ,Genetic Heterogeneity ,03 medical and health sciences ,0302 clinical medicine ,Immune system ,030225 pediatrics ,Humans ,Medicine ,Pediatrics, Perinatology, and Child Health ,molecular heterogeneity ,Child ,pediatric AML ,Cancer ,business.industry ,hematology ,Infant ,Immune dysregulation ,medicine.disease ,normal transcriptomic approach ,Leukemia, Myeloid, Acute ,Haematopoiesis ,Real-time polymerase chain reaction ,Case-Control Studies ,Child, Preschool ,Pediatrics, Perinatology and Child Health ,oncology ,Cancer research ,Female ,Stem cell ,business ,Biomarkers ,030217 neurology & neurosurgery - Abstract
Background Still 30–40% of pediatric acute myeloid leukemia (pedAML) patients relapse. Delineation of the transcriptomic profile of leukemic subpopulations could aid in a better understanding of molecular biology and provide novel biomarkers. Methods Using microarray profiling and quantitative PCR validation, transcript expression was measured in leukemic stem cells (LSC, n = 24) and leukemic blasts (L-blast, n = 25) from pedAML patients in comparison to hematopoietic stem cells (HSCs, n = 19) and control myeloblasts (C-blast, n = 20) sorted from healthy subjects. Gene set enrichment analysis was performed to identify relevant gene set enrichment signatures, and functional protein associations were identified by STRING analysis. Results Highly significantly overexpressed genes in LSC and L-blast were identified with a vast majority not studied in AML. CDKN1A, CFP, and CFD (LSC) and HOMER3, CTSA, and GADD45B (L-blast) represent potentially interesting biomarkers and therapeutic targets. Eleven LSC downregulated targets were identified that potentially qualify as tumor suppressor genes, with MYCT1, PBX1, and PTPRD of highest interest. Inflammatory and immune dysregulation appeared to be perturbed biological networks in LSC, whereas dysregulated metabolic profiles were observed in L-blast. Conclusion Our study illustrates the power of taking into account cell population heterogeneity and reveals novel targets eligible for functional evaluation and therapy in pedAML. Impact Novel transcriptional targets were discovered showing a significant differential expression in LSCs and blasts from pedAML patients compared to their normal counterparts from healthy controls. Deregulated pathways, including immune and metabolic dysregulation, were addressed for the first time in children, offering a deeper understanding of the molecular pathogenesis. These novel targets have the potential of acting as biomarkers for risk stratification, follow-up, and targeted therapy. Multiple LSC-downregulated targets endow tumor suppressor roles in other cancer entities, and further investigation whether hypomethylating therapy could result into LSC eradication in pedAML is warranted.
- Published
- 2021
22. 2021 Update on MRD in acute myeloid leukemia: a consensus document from the European LeukemiaNet MRD Working Party
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Agata Majchrzak, Adriana Plesa, Veit Buecklein, Francesco Buccisano, Richard Dillon, Arjan A. van de Loosdrecht, Farhad Ravandi, Lok Lam Ngai, Julia Herzig, Yishai Ofran, Peter J. M. Valk, Christian Thiede, Adriano Venditti, Barbara Denys, Roland B. Walter, Luca Maurillo, Wolfgang Kern, Sylvie D. Freeman, Konstanze Döhner, Costa Bachas, Agnieszka Wierzbowska, Brent L. Wood, Marta Libura, Christopher S. Hourigan, Claude Preudhomme, Marina Konopleva, Bert A. van der Reijden, Gert J. Ossenkoppele, Michael Heuser, Francis Lacombe, Felicitas Thol, Marion Subklewe, Michaela Feuring-Buske, Jan Philippé, Torsten Haferlach, Christophe Roumier, Jesse Marc Tettero, Anna Czyż, Constance Baer, Marie C. Béné, Jacqueline Cloos, Monica L. Guzman, Lina Han, Gail J. Roboz, Jeffrey L. Jorgensen, Hematology, Hematology laboratory, AII - Cancer immunology, CCA - Cancer Treatment and quality of life, CCA - Cancer biology and immunology, AII - Inflammatory diseases, and CCA - Imaging and biomarkers
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medicine.medical_specialty ,Neoplasm, Residual ,Cancer development and immune defence Radboud Institute for Molecular Life Sciences [Radboudumc 2] ,Immunology ,Disease ,Biochemistry ,European LeukemiaNet ,All institutes and research themes of the Radboud University Medical Center ,hemic and lymphatic diseases ,Medicine ,Humans ,Intensive care medicine ,Special Report ,MRD Response ,business.industry ,Surrogate endpoint ,Myeloid leukemia ,High-Throughput Nucleotide Sequencing ,Cell Biology ,Hematology ,Evidence-based medicine ,Technical specifications ,Flow Cytometry ,Prognosis ,Europe ,body regions ,Leukemia, Myeloid, Acute ,Biomarker (medicine) ,business - Abstract
Measurable residual disease (MRD) is an important biomarker in acute myeloid leukemia (AML) that is used for prognostic, predictive, monitoring, and efficacy-response assessments. The European LeukemiaNet (ELN) MRD Working Party evaluated standardization and harmonization of MRD in an ongoing manner and has updated the 2018 ELN MRD recommendations based on significant developments in the field. New and revised recommendations were established during in-person and online meetings, and a 2-stage Delphi poll was conducted to optimize consensus. All recommendations are graded by levels of evidence and agreement. Major changes include technical specifications for next-generation sequencing-based MRD testing and integrative assessments of MRD irrespective of technology. Other topics include use of MRD as a prognostic and surrogate end point for drug testing; selection of the technique, material, and appropriate time points for MRD assessment; and clinical implications of MRD assessment. In addition to technical recommendations for flow- and molecular-MRD analysis, we provide MRD thresholds and define MRD response, and detail how MRD results should be reported and combined if several techniques are used. MRD assessment in AML is complex and clinically relevant, and standardized approaches to application, interpretation, technical conduct, and reporting are of critical importance.
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- 2021
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23. Clinical implications of measurable residual disease in AML: Review of current evidence
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Barbara Denys, Tessa Kerre, Dries Deeren, Ine Moors, Jan Philippé, Dominik Selleslag, Dimitri Breems, Karl Vandepoele, and Nicole Straetmans
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Adult ,0301 basic medicine ,Oncology ,medicine.medical_specialty ,Neoplasm, Residual ,Cell Count ,Disease ,03 medical and health sciences ,0302 clinical medicine ,Predictive Value of Tests ,Recurrence ,hemic and lymphatic diseases ,Internal medicine ,medicine ,Humans ,Surrogate endpoint ,business.industry ,Remission Induction ,Induction chemotherapy ,Hematology ,Prognosis ,Minimal residual disease ,Peripheral blood ,Transplantation ,Leukemia, Myeloid, Acute ,030104 developmental biology ,medicine.anatomical_structure ,030220 oncology & carcinogenesis ,Bone marrow ,Stem cell ,business - Abstract
Despite the fact that 80% of adult acute myeloid leukaemia patients reach complete morphological remission after induction chemotherapy, many of them relapse. Many studies have shown that detection of minimal residual disease (defined as 'any detectable evidence of persistent leukaemic cells during complete morphological remission') has an added value in prediction of relapse and survival, and is more than just a surrogate marker for already known risk factors in AML. As such, the behaviour of the disease during treatment might become equally or even more important to decide whether or not an upgrade of treatment (such as an allogeneic stem cell transplantation) is necessary to improve outcome. However, there are still many open issues as to what the ideal time point is to measure MRD, which threshold is clinically significant, what sample (peripheral blood or bone marrow) should be used and how we can standardize tests so that results from different labs become comparable. This review gives an overview of currently available evidence regarding technical issues, prognostic impact and MRD-directed treatment in AML.
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- 2019
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24. Leukaemic stem cell load at diagnosis predicts the development of relapse in young acute myeloid leukaemia patients
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Tim Lammens, Gerrit Jan Schuurhuis, Valerie de Haas, C. Michel Zwaan, Eveline S. J. M. de Bont, Vincent H.J. van der Velden, Gertjan J.L. Kaspers, Barbara Denys, Barbara De Moerloose, Jan Philippé, Barbara Depreter, Jeroen G. te Marvelde, Jacqueline Cloos, Anja de Jong, Diana Hanekamp, Immunology, Pediatrics, Hematology laboratory, CCA - Cancer biology and immunology, CCA - Imaging and biomarkers, Pediatric surgery, and CCA - Cancer Treatment and quality of life
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Adult ,Male ,leukaemic stem cells ,Adolescent ,paediatric acute myeloid leukaemia ,Antigens, CD34 ,Flow cytometry ,03 medical and health sciences ,0302 clinical medicine ,Immunophenotyping ,immunophenotyping ,Predictive Value of Tests ,Recurrence ,medicine ,Humans ,Child ,Membrane Glycoproteins ,medicine.diagnostic_test ,business.industry ,flow cytometry ,Infant, Newborn ,Infant ,Hematology ,ADP-ribosyl Cyclase 1 ,Neoplasm Proteins ,Leukemia, Myeloid, Acute ,030220 oncology & carcinogenesis ,Child, Preschool ,Cancer research ,Neoplastic Stem Cells ,Female ,prognosis ,Stem cell ,Myeloid leukaemia ,business ,030215 immunology - Published
- 2018
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25. RNA-based FLT3-ITD allelic ratio is associated with outcome and ex vivo response to FLT3 inhibitors in pediatric AML
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Birgit I. Lissenberg-Witte, Eveline S. J. M. de Bont, Marry M. van den Heuvel-Eibrink, Barbara Denys, Barbara De Moerloose, Gert J. Ossenkoppele, Gerrit Jan Schuurhuis, Edwin Sonneveld, Zinia J. Kwidama, Sonja Zweegman, Valerie de Haas, Gertjan J.L. Kaspers, Jan Philippé, Tamás Csikós, Femke Verwer, Jeroen Janssen, Jacqueline Cloos, Karl Vandepoele, David G. J. Cucchi, C. Michel Zwaan, Pediatrics, CCA - Cancer biology and immunology, Hematology, and Hematology laboratory
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0301 basic medicine ,Oncology ,medicine.medical_specialty ,Base pair ,Immunology ,ACUTE MYELOID-LEUKEMIA ,DIAGNOSIS ,Biochemistry ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,LESTAURTINIB ,Internal medicine ,hemic and lymphatic diseases ,Gene duplication ,PROGNOSTIC-SIGNIFICANCE ,medicine ,Gene ,business.industry ,MUTATIONS ,Intron ,RNA ,Cell Biology ,Hematology ,CHEMOTHERAPY ,GENE ,INTERNAL TANDEM DUPLICATION ,body regions ,030104 developmental biology ,SIZE ,chemistry ,RISK GROUP ,030220 oncology & carcinogenesis ,embryonic structures ,Fms-Like Tyrosine Kinase 3 ,business ,Ex vivo ,DNA ,psychological phenomena and processes - Abstract
Controversy exists whether internal tandem duplication of FMS-like tyrosine kinase 3 (FLT3-internal tandem duplication [ITD]) allelic ratio (AR) and/or length of the ITD should be taken into account for risk stratification of pediatric acute myeloid leukemia (AML) and whether it should be measured on RNA or DNA. Moreover, the ITD status may be of relevance for selecting patients eligible for FLT3 inhibitors. Here, we included 172 pediatric AML patients, of whom 36 (21%) harbored FLT3-ITD as determined on both RNA and DNA. Although there was a good correlation between both parameters AR(spearman) = 0.62 (95% confidence interval, 0.22-0.87) and ITDlength(spearman) = 0.98 (95% confidence interval, 0.90-1.00), only AR >= 0.5 and length >= 48 base pairs (bps) based on RNA measurements were significantly associated with overall survival (AR: P-logrank = .008; ITDlength: P-logrank = .011). In large ITDs (>156 bp on DNA) a remarkable 90-bp difference exists between DNA and RNA, including intron 14, which is spliced out in RNA. Ex vivo exposure (n = 30) to FLT3 inhibitors, in particular to the FLT3-specific inhibitor gilteritinib, showed that colony-forming capacity was significantly more reduced in FLT3-ITD-AR >= 0.5 compared with ITD-AR-low and ITD2 patient samples (P
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- 2018
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26. Cancer-related mRNA expression analysis using a novel flow cytometry-based assay
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Jan Philippé, Barbara De Moerloose, Barbara Denys, Barbara Depreter, Magali Meul, Karl Vandepoele, and Tim Lammens
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0301 basic medicine ,Messenger RNA ,Histology ,medicine.diagnostic_test ,Cell ,RNA ,Cell Biology ,Biology ,medicine.disease ,Molecular biology ,Pathology and Forensic Medicine ,Flow cytometry ,03 medical and health sciences ,030104 developmental biology ,medicine.anatomical_structure ,Cell culture ,Neuroblastoma ,Gene expression ,medicine ,Gene - Abstract
Background. Cancer-related gene expression data mostly originate from unfractionated bulk samples, leading to ‘expression averaging’ of heterogeneous populations. Multicolor flow cytometry (FCM) may distinguish heterogeneous populations based on the phenotypic characterization of single-cells, but is not applicable for RNA targets. Here, we evaluated the PrimeFlow™ RNA assay, a novel FCM-based assay designed to measure gene expressions, in two cancer entities with high and low RNA target levels. Methods. Neuroblastoma (NB) cell lines were studied for MYCN gene expression by PrimeFlow™ and compared with the gold standard, RT-qPCR. Dilution series of NB cells (0.10-11%) were prepared to evaluate performance in small cell populations. Diagnostic material of de novo acute myeloid leukaemia (AML) patients was used to measure Wilms' tumor 1 (WT1) expression in bulk leukemic cells and rare subsets, e.g. leukemic stem cells (LSCs). FCM analysis was performed on a FACSCanto II (BD Biosciences) using Infinicyt™ (Cytognos®) for data analysis. mRNA expression was reported by normalised mean fluorescence intensity (MFI) values and staining indices. Results. MYCN mRNA quantified by PrimeFlow™ significantly correlated with RT-qPCR and remained detectable in small (0.1%) populations. Using PrimeFlowTM, WT1 levels were shown to be significantly higher in AML patient samples with WT1 overexpression, previously defined by RT-qPCR. Moreover, WT1 overexpression was distinguishable between heterogeneous cell populations and remained measurable in rare LSCs. Conclusion. PrimeFlow™ is a sensitive technique to investigate mRNA expressions, with high concordance to RT-qPCR. High (MYCN) and subtle (WT1) overexpressed mRNA targets can be quantified in heterogeneous and rare subpopulations e.g. LSCs. This article is protected by copyright. All rights reserved.
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- 2017
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27. Clinical Significance of
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Barbara, Depreter, Barbara, De Moerloose, Karl, Vandepoele, Anne, Uyttebroeck, An, Van Damme, Barbara, Denys, Laurence, Dedeken, Marie-Françoise, Dresse, Jutte, Van der Werff Ten Bosch, Mattias, Hofmans, Tessa, Kerre, Bart, Vandekerckhove, Jan, Philippé, and Tim, Lammens
- Subjects
Letter - Published
- 2019
28. Response-guided chemotherapy for pediatric acute myeloid leukemia without hematopoietic stem cell transplantation in first complete remission: Results from protocol DB AML-01
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Gertjan J.L. Kaspers, Barbara Denys, Maroeska te Loo, Anne Uyttebroeck, Eveline S. J. M. de Bont, An Van Damme, Marry M. van den Heuvel-Eibrink, Jozsef Zsiros, Ardine Reedijk, Jutte van der Werff ten Bosch, Valerie de Haas, Geertruida H. de Bock, Laurence Dedeken, Tim Lammens, Barbara De Moerloose, Pediatric surgery, CCA - Cancer Treatment and quality of life, Paediatric Oncology, CCA - Cancer Treatment and Quality of Life, Pediatrics, Clinical sciences, Growth and Development, Damage and Repair in Cancer Development and Cancer Treatment (DARE), Life Course Epidemiology (LCE), Stem Cell Aging Leukemia and Lymphoma (SALL), and Basic and Translational Research and Imaging Methodology Development in Groningen (BRIDGE)
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Male ,Oncology ,medicine.medical_treatment ,MULTICENTER ,CHILDREN ,Hematopoietic stem cell transplantation ,THERAPY ,0302 clinical medicine ,hemic and lymphatic diseases ,Antineoplastic Combined Chemotherapy Protocols ,Anthracyclines ,Cumulative incidence ,Prospective Studies ,Child ,Medicine(all) ,RISK ,Cytarabine/administration & dosage ,INDUCTION ,Remission Induction ,Myeloid leukemia ,Hematology ,Prognosis ,CYTARABINE ,Survival Rate ,Leukemia, Myeloid, Acute ,Leukemia ,medicine.anatomical_structure ,Child, Preschool ,030220 oncology & carcinogenesis ,HSCT ,outcome ,SURVIVAL ,Female ,Nucleophosmin ,Rare cancers Radboud Institute for Health Sciences [Radboudumc 9] ,medicine.drug ,medicine.medical_specialty ,Adolescent ,DB AML-01 ,Leukemia, Myeloid, Acute/drug therapy ,anthracycline ,Anthracyclines/administration & dosage ,03 medical and health sciences ,All institutes and research themes of the Radboud University Medical Center ,Internal medicine ,medicine ,Humans ,Survival rate ,pediatric AML ,Chemotherapy ,business.industry ,Infant, Newborn ,Infant ,medicine.disease ,INTERNAL TANDEM DUPLICATION ,RANDOMIZED-TRIAL ,SORAFENIB ,Pediatrics, Perinatology and Child Health ,Cytarabine ,Antineoplastic Combined Chemotherapy Protocols/therapeutic use ,Bone marrow ,business ,Follow-Up Studies ,030215 immunology - Abstract
Background Children with acute myeloid leukemia (AML) have a 70% survival rate with treatment regimens containing high doses of cytarabine and anthracyclines and, in some, hematopoietic stem cell transplantation (allo-HSCT). Procedure In this multicenter Dutch-Belgian protocol (DB AML-01), 112 children with de novo AML were included. Treatment was stratified according to day 15 bone marrow response after the first induction course. Poor responders received a second course without delay while good responders awaited hematological recovery. Patients achieving CR after two induction courses continued with three consolidation courses without HSCT in CR1. Results The overall remission rate was 93.5%. After a median follow-up of 4.1 years, three-year event-free survival (EFS) was 52.6% (95% CI, 42.9%-61.3%), three-year cumulative incidence of relapse 39.7% (95% CI, 30.1%-49.0%), and three-year overall survival (OS) 74.0% (95% CI, 64.8%-81.2%). Significantly more events occurred in patients with high WBC at diagnosis or FLT3-ITD/NPM1-WT, whereas core binding factor (CBF) leukemia had a significantly better EFS. KMT2A rearrangements and age > 10 years negatively impacted OS. Conclusions DB AML-01 response-guided therapy results in a favorable OS, particularly for children with CBF leukemia, children younger than 10 years or with initial WBC counts below 100 x 10(9)/L. Outcome of patients with FLT3-ITD/NPM1-WT remains poor and warrants alternative treatment strategies.
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- 2019
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29. The YPEL5–PPP1CB fusion transcript is detected in different hematological malignancies and in normal samples
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Barbara Denys, Karl Vandepoele, and Jan Philippé
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Acute leukemia ,business.industry ,Chronic lymphocytic leukemia ,Trans-splicing ,Biology and Life Sciences ,Myeloid leukemia ,Case Report ,Hematology ,Disease ,medicine.disease ,lcsh:Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,lcsh:RC254-282 ,Leukemia ,Oncology ,Fusion transcript ,YPEL5–PPP1CB ,immune system diseases ,hemic and lymphatic diseases ,Immunology ,Medicine ,Monoclonal B-cell lymphocytosis ,business ,neoplasms - Abstract
Chronic lymphocytic leukemia (CLL) is the most frequent leukemia in Western adults. It was suggested that transcripts from a reciprocal trans-splicing event between YPEL5 and PPP1CB were present exclusively in CLL patients (more than 90%). Here we show that the YPEL5–PPP1CB fusion is not specific for CLL but is also detected in other hematological malignancies such as chronic myeloid leukemia, monoclonal B cell lymphocytosis or acute leukemia and also in normal samples. As such, it is unlikely that the YPEL5–PPP1CB fusion is a good drug target in CLL or a suitable target to monitor disease., Highlights • YPEL5–PPP1CB is a chimeric transcript detected in CLL. • We detect this transcript also in non-CLL samples. • This marker is not suitable for diagnostic purposes of CLL.
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- 2015
30. RNA-based
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David G J, Cucchi, Barbara, Denys, Gertjan J L, Kaspers, Jeroen J W M, Janssen, Gert J, Ossenkoppele, Valérie, de Haas, C Michel, Zwaan, Marry M, van den Heuvel-Eibrink, Jan, Philippé, Tamás, Csikós, Zinia, Kwidama, Barbara, de Moerloose, Eveline S J M, de Bont, Birgit I, Lissenberg-Witte, Sonja, Zweegman, Femke, Verwer, Karl, Vandepoele, Gerrit Jan, Schuurhuis, Edwin, Sonneveld, and Jacqueline, Cloos
- Subjects
Male ,Aniline Compounds ,Antineoplastic Agents ,DNA ,Staurosporine ,Leukemia, Myeloid, Acute ,Treatment Outcome ,fms-Like Tyrosine Kinase 3 ,Tandem Repeat Sequences ,Pyrazines ,Chromosome Duplication ,Mutation ,Humans ,RNA ,Female ,Child ,Protein Kinase Inhibitors ,Alleles - Abstract
Controversy exists whether internal tandem duplication of FMS-like tyrosine kinase 3 (
- Published
- 2017
31. Cancer-related mRNA expression analysis using a novel flow cytometry-based assay
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Barbara, Depreter, Jan, Philippé, Magali, Meul, Barbara, Denys, Karl, Vandepoele, Barbara, De Moerloose, and Tim, Lammens
- Subjects
Cell Line, Tumor ,Gene Expression Profiling ,Neoplasms ,Humans ,RNA, Messenger ,Flow Cytometry - Abstract
Cancer-related gene expression data mostly originate from unfractionated bulk samples, leading to "expression averaging" of heterogeneous populations. Multicolor flow cytometry (FCM) may distinguish heterogeneous populations based on the phenotypic characterization of single-cells, but is not applicable for RNA targets. Here, we evaluated the PrimeFlow™ RNA assay, a novel FCM-based assay designed to measure gene expressions, in two cancer entities with high and low RNA target levels.Neuroblastoma (NB) cell lines were studied for MYCN gene expression by PrimeFlow™ and compared with the gold standard, RT-qPCR. Dilution series of NB cells (0.10-11%) were prepared to evaluate performance in small cell populations. Diagnostic material of de novo acute myeloid leukemia (AML) patients was used to measure Wilms' tumor 1 (WT1) expression in bulk leukemic cells and rare subsets, e.g. leukemic stem cells (LSCs). FCM analysis was performed on a FACSCanto II (BD Biosciences) using Infinicyt™ (CytognosMYCN mRNA quantified by PrimeFlow™ significantly correlated with RT-qPCR and remained detectable in small (0.1%) populations. Using PrimeFlowPrimeFlow™ is a sensitive technique to investigate mRNA expressions, with high concordance to RT-qPCR. High (MYCN) and subtle (WT1) overexpressed mRNA targets can be quantified in heterogeneous and rare subpopulations e.g. LSCs. © 2017 International Clinical Cytometry Society.
- Published
- 2017
32. The NF1 hotspot in acute myeloid leukemia: what’s in a name?
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Karl Vandepoele, Joni Van der Meulen, and Barbara Denys
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0301 basic medicine ,03 medical and health sciences ,Cancer Research ,030104 developmental biology ,Oncology ,Cancer research ,Myeloid leukemia ,Hematology ,Biology - Published
- 2018
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33. A clinical-laboratory approach contributing to a rapid and reliable diagnosis of heparin-induced thrombocytopenia
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Jan Philippé, Katrien Devreese, Barbara Denys, and Veronique Stove
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Male ,medicine.medical_specialty ,medicine.drug_class ,Low molecular weight heparin ,Enzyme-Linked Immunosorbent Assay ,Optical density ,Likelihood ratios in diagnostic testing ,Antibodies ,Immunoenzyme Techniques ,Internal medicine ,Heparin-induced thrombocytopenia ,medicine ,Humans ,Platelet activation ,Aged ,Heparin ,business.industry ,Anticoagulant ,Anticoagulants ,Hematology ,Flow Cytometry ,medicine.disease ,Thrombocytopenia ,Confidence interval ,Surgery ,Female ,business ,Blood sampling - Abstract
Introduction Heparin-induced thrombocytopenia (HIT) remains a very challenging diagnosis. The first objective of this study was to compare the performance of the ID-H/PF4 PaGIA® with the Asserachrom® HPIA ELISA. The main purpose was to evaluate the diagnostic utility of the combination of the H/PF4 PaGIA® with the clinical “4T's” score as a screening strategy. Materials and Methods 102 patients with clinical suspicion of HIT were classified into risk groups using the 4T's score. The presence of HIT antibodies was assessed by two immunoassays and confirmed by a functional flow cytometric assay. Results Comparison of the ID-H/PF4 PaGIA® with the Asserachrom® HPIA ELISA demonstrated a comparable technical performance, being an excellent screening test to rule out HIT (negative predictive value or NPV = 100%). According to the 4T's score, HIT was excluded in all low risk patients (NPV = 100%). ELISA optical density levels were significantly different between all risk groups (P-values
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- 2008
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34. A Real-Time Polymerase Chain Reaction Assay for Rapid, Sensitive, and Specific Quantification of the JAK2V617F Mutation Using a Locked Nucleic Acid-Modified Oligonucleotide
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Barbara Denys, Hakim El Housni, Friedel Nollet, Jan Philippé, and Bruno Verhasselt
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Time Factors ,Serial dilution ,Genotype ,Oligonucleotides ,Biology ,Polymerase Chain Reaction ,Sensitivity and Specificity ,Melting curve analysis ,Pathology and Forensic Medicine ,law.invention ,chemistry.chemical_compound ,law ,Humans ,Allele ,Locked nucleic acid ,Polymerase chain reaction ,Alleles ,Oligonucleotide ,Reproducibility of Results ,Janus Kinase 2 ,Molecular biology ,chemistry ,Biochemistry ,Amino Acid Substitution ,Mutation ,Molecular Medicine ,Biological Assay ,DNA ,Regular Articles - Abstract
The JAK2V617F mutation has emerged as an essential molecular determinant of myeloproliferative neoplasms (MPNs). The aim of this study was to evaluate the analytical and clinical performances of a real-time PCR (qPCR) assay using a combination of hydrolysis probes and a wild-type blocking oligonucleotide, all containing locked nucleic acid (LNA) bases. Moreover, we validated a procedure for precise quantification of the JAK2V617F allele burden. We used DNA samples from patients suspected to suffer from MPN and dilutions of HEL cells, carrying the mutation, to compare the LNA-qPCR assay to two previously published methods. All assays detected the same 36 JAK2V617F positive patients of 116 suspected MPN diagnostic samples. No amplification of normal donor DNA was observed in the LNA-qPCR, and the assay was able to detect and reproducibly quantify as few as 0.4% of the JAK2V617F allele in wild-type alleles. Quantification of the JAK2V617F allele burden showed similar proportion levels among the different MPN entities as described by other groups. In conclusion, the LNA-qPCR is a rapid, robust, sensitive, and highly specific assay for quantitative JAK2V617F determination that can be easily implemented in clinical molecular diagnostic laboratories. Moreover, precise quantification allows determination of JAK2V617F burden at diagnosis as well as the evaluation of response to JAK2 inhibitors.
- Published
- 2010
35. A clinical-laboratory approach contributing to a rapid and reliable diagnosis of heparin-induced thrombocytopenia: An update
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Katrien Devreese and Barbara Denys
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medicine.medical_specialty ,business.industry ,Heparin ,MEDLINE ,Anticoagulants ,Hematology ,medicine.disease ,Flow Cytometry ,Thrombocytopenia ,Antibodies ,Heparin-induced thrombocytopenia ,medicine ,Humans ,Intensive care medicine ,business - Published
- 2009
36. Excellent Outcome in Pediatric AML with Response Guided Chemotherapy without Allogeneic HSCT in First Complete Remission: Results from Protocol DB-AML01
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Marry van den Heuvel, An Vandamme, Valerie de Haas, Gertjan J.L. Kaspers, Tim Lammens, Eveline S. J. M. de Bont, Barbara Denys, Anne Uyttebroeck, Maroeska te Loo, Jozsef Zsiros, Ardine Reedijk, Jutte VanderWerff-ten Bosch, Barbara De Moerloose, and Laurence Dedeken
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Pediatrics ,medicine.medical_specialty ,Mitoxantrone ,Anthracycline ,business.industry ,Cumulative dose ,Immunology ,Cell Biology ,Hematology ,Lower risk ,Biochemistry ,Gastroenterology ,Median follow-up ,Internal medicine ,medicine ,Cytarabine ,Idarubicin ,business ,Etoposide ,medicine.drug - Abstract
Background: Contemporary treatment schedules for pediatric acute myeloid leukemia (AML) have improved 5 year-overall survival rates up to 70% . These schedules usually consist of 4 to 5 intensive courses mainly based on cytarabine (AraC) and anthracyclines, with allo-HSCT upfront in a subset of patients . Long-term side effects such as late cardiotoxicity caused by high cumulative anthracycline dosages are a major concern. Therefore, the DCOG/BSPHO collaboration adapted the NOPHO 2004 protocol to DB-AML01 to reduce cumulative anthracyclines from 420-450 mg/m² to 300-330 mg/m² and to omit HSCT in CR1. Material: The treatment consisted of 5 chemotherapy courses: first induction course AIET (AraC conventional dose and Idarubicin (Ida) 36 mg/m2); second induction course AM (AraC conventional dose and Mitoxantrone (Mitox) 30 mg/m2) when blasts at day 15 < 5% or FLA-DNX (high dose AraC and Daunoxome (DNX) 180 mg/m2) when blasts > 5% at day 15 or t(8;21) AML; 3 consolidation courses (high dose AraC with Etoposide as course 3 and 5 and in between high dose AraC alone). Cumulative dose of AraC is 43,4 gr/m2 and of anthracyclines 300 mg/m² for patients receiving AIET+AM or 330 mg/m² for patients receiving AIET/FLA-DNX. Results: From 2010 to 2014 a total of 113 children with AML, median age 6.0 yrs (range 0-16), gender 56 males, were included. Second induction course was AM in n=75 and FLA-DNX in n= 33. Death in induction occurred in 4 patients, CR rate was 102/113 (90.3%) and 7 patients were refractory after induction. The later events were death in CR (n=2), relapse in CR (n=40), and secondary malignancies (n=0). HSCT was given to 3 patients in CR1 (physician's decision). Median follow up time is 2.6 years (range (range 1-5). Probability of EFS at 2 years was 60% (95% CI 49-69%) and 2-yr OS was 76 (95% CI 66-83%)77.9%. Especially inv 16 (n=10) and t(8;21) AML (n=16) had an excellent outcome (inv 16:2-yr EFS: 70% (95% CI 32-89%) and 2-yr OS 91% (95% CI 51-99%) resp t(8;21):2-yr EFS: 87% (95% CI 57-97%) and OS: 94% (95% CI 63-99%)), EFS nor OS in other genetic subgroups such as FLT3-ITD and MLL rearrangements were significantly different from the total group. Children with an older age (> 10 years) (n=34) or high WBC count (>50.109/l) (n=41) had the poorest 2-yr EFS: 51 (95% CI 33-67%) resp EFS: 40% (95% CI 24-56%), whereas OS was not significantly worse. For the patients with a relapse, 32 achieved a second CR and 4 a partial remission (90%) . In second CR 34 patients received an allo-HSCT. Until now 26 of the 40 patients are still in second CR. Conclusion: The DB-AML01 outcome data suggest that the choice of high cumulative doses of AraC with moderate cumulative doses of anthracyclines up to 300-330 mgr/m² results in a favorable overall survival for particularly those children with t(8;21), inv (16) AML, young age or lower WBC counts. Children with relapsed AML could be rescued with second line treatment and allo-HSCT. These results underscore the relevance of identification of subgroups of pediatric AML patients, based on age, WBC count and t(8;21) or inv 16, curable with "lower risk" treatment arms without allo-HSCT in CR1. Disclosures Kaspers: Janssen-Cilag: Research Funding.
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- 2015
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37. Poliovirus sampling by using sodium dodecyl sulfate/EDTA-pretreated chromatography paper strips
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Leen Vijgen, Mustafizur Rahman, Inge Thoelen, Barbara Denys, Piet Maes, Els Van Doren, and Marc Van Ranst
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Paper ,Serial dilution ,viruses ,Biophysics ,Biology ,medicine.disease_cause ,complex mixtures ,Biochemistry ,Sensitivity and Specificity ,Poliovirus Type 1 ,Specimen Handling ,chemistry.chemical_compound ,Feces ,medicine ,Sodium dodecyl sulfate ,Molecular Biology ,Edetic Acid ,Infectivity ,Chromatography ,Reverse Transcriptase Polymerase Chain Reaction ,Poliovirus ,Temperature ,Reproducibility of Results ,Sodium Dodecyl Sulfate ,Cell Biology ,Virology ,Polio Vaccination ,Paper chromatography ,chemistry ,Enterovirus - Abstract
To achieve the goal of poliovirus eradication, surveillance of endemic areas is a crucial step in the poliovirus eradication program. Currently, six countries still have endemic poliovirus. We have tested a novel method which uses SDS/EDTA-treated chromatography paper strips to collect and transport poliovirus-containing stool samples. The SDS/EDTA-treated paper strips were soaked with different dilutions of poliovirus-containing feces and stored at different temperatures. After storing the SDS/EDTA paper strips for 5 months at 37 degrees C, poliovirus RNA could be successfully amplified using RT-PCR. Infectivity of wild-type poliovirus type 1, 2, and 3 was lost upon contact with the SDS/EDTA-treated strips. This easy, inexpensive, and biosafe chromatography paper strip method for the collection and transportation of poliovirus samples can be of use in poliovirus surveillance and polio vaccination programs.
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- 2004
38. Results of An International Study of Quantitative BCR/ABL Assays Using Defined RNA Samples
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Pierre Jjc DeSchouwer, Hongxin Fan, Thomas Monroe, Suzan Lambin, L Cai, Oscar Fuster, Marleen Bakkus, Eric Winstall, Claire Abbal, George Georgiou, Jerald P. Radich, Hanfang Zhang, Petr Starostik, Jay H. Shaw, Freya Vaeyens, Kimberly Hocker, Sherry Taylor, Barbara Denys, Lurdes Zamora, Nancy Boeckx, Ying Huang, Linda Fletcher, B. Kelly Mcneil, Elisa Romeo, Christopher D. Watt, Adriana Muniz-Fernandez, Dolors Colomer, Teresa Webb-Martin, Katrien Pieters, Heather Todd, Iris Schrijver, Chris Wong, Jeffrey E. Miller, C. Renee Webb, Dorie Sher, Qi Wei, Brigitte Maes, Céline Callens, Peter Vandenberghe, and Phillippe Van Lint
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Complete data ,ABL ,Hl60 cells ,Serial dilution ,Immunology ,breakpoint cluster region ,RNA ,Cell Biology ,Hematology ,Biology ,Laboratory results ,Biochemistry ,Molecular biology ,Housekeeping gene - Abstract
Abstract 2742 Molecular monitoring of BCR/ABL transcripts by real time quantitative reverse transcription PCR (qRT-PCR) is an essential technique for clinical management of patients with BCR/ABL-positive CML and ALL. Though quantitative BCR/ABL assays are performed in hundreds of laboratories worldwide, results among these laboratories cannot be reliably compared due to heterogeneity in test methods, data analysis, reporting, and lack of quantitative standards. Recent efforts towards standardization have been limited in scope. Aliquots of RNA were sent to clinical test centers worldwide in order to evaluate methods and reporting for e1a2, b2a2, and b3a2 transcript levels using their own qRT-PCR assays. Total RNA was isolated from tissue culture cells that expressed each of the different BCR/ABL transcripts. Serial log dilutions were prepared, ranging from 100 to 10−5, in RNA isolated from HL60 cells. Laboratories performed 5 independent qRT-PCR reactions for each sample type at each dilution. In addition, 15 qRT-PCR reactions of the 10−3 b3a2 RNA dilution were run to assess reproducibility within and between laboratories. Participants were asked to run the samples following their standard protocols and to report cycle threshold (Ct), quantitative values for BCR/ABL and housekeeping genes, and ratios of BCR/ABL to housekeeping genes for each sample RNA. Thirty-seven (n=37) participants have submitted qRT-PCR results for analysis (36, 37, and 34 labs generated data for b2a2, b3a2, and e1a2, respectively). The limit of detection for this study was defined as the lowest dilution that a Ct value could be detected for all 5 replicates. For b2a2, 15, 16, 4, and 1 lab(s) showed a limit of detection at the 10−5, 10−4, 10−3, and 10−2 dilutions, respectively. For b3a2, 20, 13, and 4 labs showed a limit of detection at the 10−5, 10−4, and 10−3 dilutions, respectively. For e1a2, 10, 21, 2, and 1 lab(s) showed a limit of detection at the 10−5, 10-4, 10-3, and 10-2 dilutions, respectively. Log %BCR/ABL ratio values provided a method for comparing results between the different laboratories for each BCR/ABL dilution series. Linear regression analysis revealed concordance among the majority of participant data over the 10-1 to 10-4 dilutions. The overall slope values showed comparable results among the majority of b2a2 (mean=0.939; median=0.9627; range (0.399 – 1.1872)), b3a2 (mean=0.925; median=0.922; range (0.625 – 1.140)), and e1a2 (mean=0.897; median=0.909; range (0.5174 – 1.138)) laboratory results (Fig. 1–3)). Thirty-four (n=34) out of the 37 laboratories reported Ct values for all 15 replicates and only those with a complete data set were included in the inter-lab calculations. Eleven laboratories either did not report their copy number data or used other reporting units such as nanograms or cell numbers; therefore, only 26 laboratories were included in the overall analysis of copy numbers. The median copy number was 348.4, with a range from 15.6 to 547,000 copies (approximately a 4.5 log difference); the median intra-lab %CV was 19.2% with a range from 4.2% to 82.6%. While our international performance evaluation using serially diluted RNA samples has reinforced the fact that heterogeneity exists among clinical laboratories, it has also demonstrated that performance within a laboratory is overall very consistent. Accordingly, the availability of defined BCR/ABL RNAs may facilitate the validation of all phases of quantitative BCR/ABL analysis and may be extremely useful as a tool for monitoring assay performance. Ongoing analyses of these materials, along with the development of additional control materials, may solidify consensus around their application in routine laboratory testing and possible integration in worldwide efforts to standardize quantitative BCR/ABL testing. Download : Download high-res image (127KB) Download : Download full-size image Download : Download high-res image (127KB) Download : Download full-size image Download : Download high-res image (128KB) Download : Download full-size image Disclosure: Sher: Invivoscribe Technologies Inc: Employment. Miller: Invivoscribe Technologies Inc: Employment. Huang: Invivoscribe Technologies Inc: Employment. Shaw: Invivoscribe Technologies Inc: Employment.
- Published
- 2010
- Full Text
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