408 results on '"Basidiomycota cytology"'
Search Results
2. Unroughing the cat's tongue mushrooms: Four new species of Pseudohydnum from Brazil based on morphological and molecular phylogenetic evidence.
- Author
-
Coelho-Nascimento C, Zabin DA, E Silva-Filho AGDS, Drewinski MP, Alves-Silva G, Kossmann T, Titton M, Drechsler-Santos ER, and Menolli N Jr
- Subjects
- Brazil, Sequence Analysis, DNA, DNA, Ribosomal genetics, Basidiomycota classification, Basidiomycota genetics, Basidiomycota cytology, Basidiomycota isolation & purification, RNA, Ribosomal, 28S genetics, Fruiting Bodies, Fungal cytology, Forests, Phylogeny, DNA, Fungal genetics, DNA, Ribosomal Spacer genetics, Spores, Fungal cytology, Spores, Fungal classification, Agaricales classification, Agaricales genetics, Agaricales isolation & purification, Agaricales cytology
- Abstract
Pseudohydnum , commonly known as cat's tongue mushrooms, is a monophyletic assemblage within Auriculariales, which encompasses species with gelatinous basidiomata, spathulate, flabellate, or shell-shaped pileus, hydnoid hymenophore, globose to ellipsoidal basidiospores, and longitudinally cruciate-septate basidia. According to the available literature, 16 species have been described in Pseudohydnum , mostly represented in temperate-boreal forests of the Northern Hemisphere. However, the limited morphological, molecular, and ecological information, especially from the Southern Hemisphere ecosystems, does not presently allow a reliable assessment of its taxonomic boundaries nor provide a complete picture of the species diversity in the genus. In an ongoing effort to examine specimens collected in dense and mixed ombrophilous forest fragments (Atlantic Rainforest domain) from Southeastern and Southern Brazil, additional taxa assigned to Pseudohydnum were identified. Four new species are recognized based mostly on characters of the pileus surface, stipe, hymenium, and basidiospores. Molecular phylogenetic analyses based on nuc rDNA internal transcribed spacer region ITS1-5.8S-ITS2 (ITS barcode), partial nuc rDNA 28S, and partial RNA polymerase II largest subunit ( RPB1 ) sequences supported the description of these new taxa. Here, we propose Pseudohydnum brasiliense, P. brunneovelutinum, P. cupulisnymphae , and P. viridimontanum as new species. Morphological descriptions, line drawings, habitat photos, and comparisons with closely related taxa are provided. A dichotomous key for identification of currently known Southern Hemisphere Pseudohydnum species is presented.
- Published
- 2024
- Full Text
- View/download PDF
3. Identifying carbohydrate-active enzymes of Cutaneotrichosporon oleaginosus using systems biology.
- Author
-
Fuchs T, Melcher F, Rerop ZS, Lorenzen J, Shaigani P, Awad D, Haack M, Prem SA, Masri M, Mehlmer N, and Brueck TB
- Subjects
- Fungal Proteins metabolism, Industrial Microbiology, Systems Biology methods, Basidiomycota cytology, Basidiomycota enzymology, Basidiomycota physiology, Carbohydrate Metabolism, Hydrolases metabolism, Lipid Metabolism, Proteome
- Abstract
Background: The oleaginous yeast Cutaneotrichosporon oleaginosus represents one of the most promising microbial platforms for resource-efficient and scalable lipid production, with the capacity to accept a wide range of carbohydrates encapsulated in complex biomass waste or lignocellulosic hydrolysates. Currently, data related to molecular aspects of the metabolic utilisation of oligomeric carbohydrates are sparse. In addition, comprehensive proteomic information for C. oleaginosus focusing on carbohydrate metabolism is not available., Results: In this study, we conducted a systematic analysis of carbohydrate intake and utilisation by C. oleaginosus and investigated the influence of different di- and trisaccharide as carbon sources. Changes in the cellular growth and morphology could be observed, depending on the selected carbon source. The greatest changes in morphology were observed in media containing trehalose. A comprehensive proteomic analysis of secreted, cell wall-associated, and cytoplasmatic proteins was performed, which highlighted differences in the composition and quantity of secreted proteins, when grown on different disaccharides. Based on the proteomic data, we performed a relative quantitative analysis of the identified proteins (using glucose as the reference carbon source) and observed carbohydrate-specific protein distributions. When using cellobiose or lactose as the carbon source, we detected three- and five-fold higher diversity in terms of the respective hydrolases released. Furthermore, the analysis of the secreted enzymes enabled identification of the motif with the consensus sequence LALL[LA]L[LA][LA]AAAAAAA as a potential signal peptide., Conclusions: Relative quantification of spectral intensities from crude proteomic datasets enabled the identification of new enzymes and provided new insights into protein secretion, as well as the molecular mechanisms of carbo-hydrolases involved in the cleavage of the selected carbon oligomers. These insights can help unlock new substrate sources for C. oleaginosus, such as low-cost by-products containing difficult to utilize carbohydrates. In addition, information regarding the carbo-hydrolytic potential of C. oleaginosus facilitates a more precise engineering approach when using targeted genetic approaches. This information could be used to find new and more cost-effective carbon sources for microbial lipid production by the oleaginous yeast C. oleaginosus., (© 2021. The Author(s).)
- Published
- 2021
- Full Text
- View/download PDF
4. Geometric morphometric analysis of spore shapes improves identification of fungi.
- Author
-
Ordynets A, Keßler S, and Langer E
- Subjects
- Spores, Fungal classification, Basidiomycota classification, Basidiomycota cytology, Image Processing, Computer-Assisted, Spores, Fungal cytology
- Abstract
Morphology of organisms is an essential source of evidence for taxonomic decisions and understanding of ecology and evolutionary history. The geometric structure (i.e., numeric description of shape) provides richer and mathematically different information about an organism's morphology than linear measurements. A little is known on how these two sources of morphological information (shape vs. size) contribute to the identification of organisms when implied simultaneously. This study hypothesized that combining geometric information on the outline with linear measurements results in better species identification than either evidence alone can provide. As a test system for our research, we used the microscopic spores of fungi from the genus Subulicystidium (Agaricomycetes, Basidiomycota). We analyzed 2D spore shape data via elliptic Fourier and principal component analyses. Using flexible discriminant analysis, we achieved the highest species identification success rate for a combination of shape and size descriptors (64.7%). The shape descriptors alone predicted species slightly better than size descriptors (61.5% vs. 59.1%). We conclude that adding geometric information on the outline to linear measurements improves the identification of the organisms. Despite the high relevance of spore traits for the taxonomy of fungi, they were previously rarely analyzed with the tools of geometric morphometrics. Therefore, we supplement our study with an open access protocol for digitizing and summarizing fungal spores' shape and size information. We propagate a broader use of geometric morphometric analysis for microscopic propagules of fungi and other organisms., Competing Interests: The authors have declared that no competing interests exist.
- Published
- 2021
- Full Text
- View/download PDF
5. Phosphoinositide signaling plays a key role in the regulation of cell wall reconstruction during the postharvest morphological development of Dictyophora indusiata.
- Author
-
Geng F, Wen X, Xu Y, Zhang M, Zhou L, Liu D, Li X, and Wang J
- Subjects
- Basidiomycota metabolism, Carbohydrate Metabolism, Down-Regulation, Mitogen-Activated Protein Kinases metabolism, Phosphorylation, Proteome metabolism, Up-Regulation, Basidiomycota cytology, Basidiomycota growth & development, Cell Wall metabolism, Phosphatidylinositols metabolism, Signal Transduction
- Abstract
The potential signaling mechanism of Dictyophora indusiata during postharvest morphological development was investigated through quantitative phosphoproteomic analyses. A total of 1566 phosphorylation sites changed significantly (872 upregulated and 694 downregulated) in the mature stage compared with those in the peach-shaped stage of D. indusiata. Bioinformatics analysis showed that the upregulated differentially phosphorylated proteins were mainly involved in the "phosphatidylinositol signaling system" and "mitogen-activated protein kinase signaling pathway-yeast", while the downregulated differentially phosphorylated proteins were related mainly to "starch and sucrose metabolism". Further mining of the phosphoproteome data revealed that upregulated phosphoinositide signaling activated the cell wall integrity pathway and then regulated the synthesis of the main components of the cell wall. The results suggested that phosphoinositide signaling could be a potential target pathway for the regulation of the postharvest morphological development of D. indusiata., (Copyright © 2020 Elsevier Ltd. All rights reserved.)
- Published
- 2021
- Full Text
- View/download PDF
6. New species of Tulasnella associated with Australian terrestrial orchids in the Cryptostylidinae and Drakaeinae.
- Author
-
Arifin AR, May TW, and Linde CC
- Subjects
- Australia, DNA, Ribosomal Spacer genetics, Genes, Fungal, Genes, Mitochondrial genetics, Glutamate Synthase genetics, Mycorrhizae classification, Mycorrhizae cytology, Mycorrhizae genetics, Mycorrhizae isolation & purification, Orchidaceae growth & development, Phylogeny, Plant Roots microbiology, Symbiosis, Basidiomycota classification, Basidiomycota cytology, Basidiomycota genetics, Basidiomycota isolation & purification, Classification, Orchidaceae microbiology
- Abstract
Many orchids have an obligate relationship with Tulasnella mycorrhizal fungi for seed germination and support into adulthood. Despite the importance of Tulasnella as mycorrhizal partners, many species remain undescribed. Here, we use multiple sequence locus phylogenetic analyses to delimit and describe six new Tulasnella species associated with Australian terrestrial orchids from the subtribes Cryptostylidinae and Drakaeinae. Five of the new species, Tulasnella australiensis, T. occidentalis, T. punctata, T. densa , and T. concentrica , all associate with Cryptostylis (Cryptostylidinae), whereas T. rosea associates with Spiculaea ciliata (Drakaeinae). Isolates representing T. australiensis were previously also reported in association with Arthrochilus (Drakaeinae). All newly described Tulasnella species were delimited by phylogenetic analyses of four loci (nuc rDNA internal transcribed spacer region ITS1-5.8S-ITS2 [ITS], C14436 [ATP synthase], C4102 [glutamate synthase], and mt 16S rDNA [mtLSU]). The pairwise sequence divergence between species for the ITS region ranged from 5.6% to 25.2%, and the maximum sequence divergence within the newly described species ranged from 1.64% to 4.97%. There was a gap in the distribution of within- and between-species pairwise divergences in the region of 4-6%, with only one within-species value of 4.97% (for two T. australiensis isolates) and one between-species value of 5.6% (involving an isolate of T. occidentalis ) falling within this region. Based on fluorescence staining, all six new Tulasnella species are binucleate and have septate, cylindrical hyphae. There was some subtle variation in culture morphology, but colony diameter as measured on 3MN+vitamin medium after 6 wk of growth did not differ among species. However, T. australiensis grew significantly ( P < 0.02) slower than others on ½ FIM and ¼ potato dextrose agar (PDA) media. Formal description of these Tulasnella species contributes significantly to documentation of Tulasnella diversity and provides names and delimitations to underpin further research on the fungi and their relationships with orchids.
- Published
- 2021
- Full Text
- View/download PDF
7. Cell death in Ustilago maydis: comparison with other fungi and the effect of metformin and curcumin on its chronological lifespan.
- Author
-
Soberanes-Gutiérrez CV, León-Ramírez C, Sánchez-Segura L, Cordero-Martínez E, Vega-Arreguín JC, and Ruiz-Herrera J
- Subjects
- Basidiomycota drug effects, Culture Media, Microbial Viability, Reactive Oxygen Species, Saccharomyces cerevisiae, Yarrowia, Basidiomycota cytology, Cell Death, Curcumin pharmacology, Metformin pharmacology
- Abstract
Ustilago maydis is a Basidiomycota fungus, in which very little is known about its mechanisms of cell survival and death. To date, only the role of metacaspase1, acetate and hydrogen peroxide as inducers of cell death has been investigated. In the present work, we analyzed the lifespan of U. maydis compared with other species like Sporisorium reilianum, Saccharomyces cerevisiae and Yarrowia lipolytica, and we observed that U. maydis has a minor lifespan. We probe the addition of low concentrations metformin and curcumin to the culture media, and we observed that both prolonged the lifespan of U. maydis, a result observed for the first time in a phytopathogen fungus. However, higher concentrations of curcumin were toxic for the cells, and interestingly induced the yeast-to-mycelium dimorphic transition. The positive effect of metformin and curcumin appears to be related to an inhibition of the mechanistic Target of Rapamycin (mTOR) pathway, increase expression of autophagy genes and reducing of reactive oxygen species. These data indicate that U. maydis may be a eukaryotic model organism to elucidate the molecular mechanism underlying apoptotic and necrosis pathways, and the lifespan increase caused by metformin and curcumin., (© The Author(s) 2020. Published by Oxford University Press on behalf of FEMS.)
- Published
- 2020
- Full Text
- View/download PDF
8. Species diversity, taxonomy, and phylogeny of Gymnosporangium in China.
- Author
-
Tao SQ, Cao B, Kakishima M, and Liang YM
- Subjects
- China, Genetic Variation, Phylogeny, Basidiomycota classification, Basidiomycota cytology, Basidiomycota genetics, Biodiversity, Geography, Plant Diseases, Plants microbiology
- Abstract
Gymnosporangium is a group of plant fungal pathogens that cause rust diseases on many economically important fruit trees. Most Gymnosporangium are heteroecious and demicyclic, producing four morphologically diverse spore stages on two taxonomically unrelated host plants, the Cupressaceae and Rosaceae. The complex life cycle and heteroecism make it difficult to investigate the species within Gymnosporangium . To determine the taxonomy, phylogeny, and species diversity of Gymnosporangium in China, a large collection of 672 specimens were analyzed using a combination of morphological observations and phylogenetic analyses. In total, 27 Gymnosporangium species from China are documented here, including 22 known species, one new combination, one new record, and three new species. The study also documents a novel aeciospore surface structure with an irregular surface that is described here as "surfy."
- Published
- 2020
- Full Text
- View/download PDF
9. Poroid Hymenochaetaceae associated with trees showing wood-rot symptoms in the Garden Route National Park of South Africa.
- Author
-
Tchoumi JMT, Coetzee MPA, Rajchenberg M, and Roux J
- Subjects
- Basidiomycota cytology, Basidiomycota genetics, Biodiversity, DNA, Fungal genetics, Forests, Parks, Recreational, Peptide Elongation Factor 1 genetics, Phylogeny, RNA, Ribosomal, 28S genetics, Sequence Analysis, DNA, South Africa, Basidiomycota classification, Basidiomycota isolation & purification, Plant Diseases microbiology, Wood microbiology
- Abstract
Poroid Hymenochaetaceae associated with wood rots of trees in three timber-harvesting compartments of the Garden Route National Park (GRNP), South Africa, were investigated using multilocus phylogenetic analyses and morphology of the basidiomes. Results revealed the presence of 10 species belonging to five genera. Six of the species are known, but four are described as new. The known species include Fomitiporia capensis, Fuscoporia gilva, Sanghuangporus microcystideus, Tropicoporus tropicalis, Inonotus rickii , and Inonotus setuloso-croceus . The new species are described as Fomitiporia tsitsikamensis, Fulvifomes elaeodendri, Fuscoporia pulviniformis , and Phellinus guttiformis .
- Published
- 2020
- Full Text
- View/download PDF
10. Taxonomic revision of species of Kuehneola and Phragmidium on Rosa , including two new species from China.
- Author
-
Liu Y, Liang YM, and Ono Y
- Subjects
- Basidiomycota cytology, Basidiomycota genetics, China, DNA, Fungal genetics, DNA, Ribosomal Spacer genetics, Phylogeny, Plant Diseases microbiology, RNA, Ribosomal, 28S genetics, Sequence Analysis, DNA, Spores, Fungal classification, Spores, Fungal cytology, Spores, Fungal genetics, Basidiomycota classification, Rosa microbiology
- Abstract
Kuehneola japonica and K. warburgiana are the only species of genus Kuehneola that parasitize plants belonging to genus Rosa (Rosaceae). Systematic revision of the genus Phragmidium and related genera by molecular phylogenetic analyses using nuc rDNA internal transcribed spacer (5.8S-ITS2 = ITS2) and nuc rDNA 28S (28S) sequences indicated that K. japonica and K. warburgiana belong to a group of Phragmidium species that also occur on Rosa . Morphological and molecular phylogenetic analyses revealed that these Kuehneola species were transferred to Phragmidium and renamed as P. japonicum and P. warburgianum . Two new Phragmidium species were also discovered on Rosa from China that could be distinguished from other species in the genus based on aeciospore or urediniospore morphology and phylogenetic placement. The first species, P. jiangxiense , is characterized by a urediniospore surface structure with stout spines that are basally embedded in the wrinkled spore wall. The second species, P. leucoaecium , is characterized by an aeciospore surface structure with irregularly elongated verrucae. Taxonomic descriptions and illustrations are provided.
- Published
- 2020
- Full Text
- View/download PDF
11. Diversity trapped in cages: Revision of Blumenavia Möller (Clathraceae, Basidiomycota) reveals three hidden species.
- Author
-
Melanda GCS, Accioly T, Ferreira RJ, Rodrigues ACM, Cabral TS, Coelho G, Sulzbacher MA, Cortez VG, Grebenc T, Martín MP, and Baseia IG
- Subjects
- Basidiomycota cytology, Basidiomycota genetics, Bayes Theorem, Brazil, DNA, Fungal genetics, Mexico, Phylogeny, Species Specificity, Spores, Fungal cytology, Tanzania, Basidiomycota classification
- Abstract
Basidiomata of Phallales have a diversified morphology with adhesive gleba that exudes an odor, usually unpleasant that attracts mainly insects, which disperse the basidiospores. The genus Blumenavia belongs to the family Clathraceae and, based on morphological features, only two species are currently recognized: B. rhacodes and B. angolensis. However, the morphological characters adopted in species delimitations within this genus are inconsistent, and molecular data are scarce. The present study aimed to review and identify informative characters that contribute to the delimitation of Blumenavia species. Exsiccates from America and Africa were analyzed morphologically, and molecularly, using ITS, LSU, ATP6, RPB2 and TEF-1α markers for Maximum Parsimony, Bayesian and Maximum likelihood analyses, and also for coalescent based species delimitations (BP&P), as well as for bPTP, PhyloMap, Topo-phylogenetic and Geophylogenetic reconstructions. According to our studies, seven species can be considered in the genus: B. rhacodes and B. angolensis are maintained, B. usambarensis and B. toribiotalpaensis are reassessed, and three new species are proposed, B. baturitensis Melanda, M.P. Martín & Baseia, sp. nov., B. crucis-hellenicae G. Coelho, Sulzbacher, Grebenc & Cortez, sp. nov., and B. heroica Melanda, Baseia & M.P. Martín, sp. nov. Blumenavia rhacodes is typified by selecting a lectotype and an epitype. Macromorphological characters considered informative to segregate and delimit the species through integrative taxonomy include length of the basidiomata, color, width and presence of grooves on each arm as well as the glebifer position and shape. These must be clearly observed while the basidiomata are still fresh. Since most materials are usually analyzed after dehydration and deposit in collections, field techniques and protocols to describe fugacious characters from fresh specimen are demanded, as well as the use of molecular analysis, in order to better assess recognition and delimitation of species in Blumenavia., Competing Interests: The authors have declared that no competing interests exist.
- Published
- 2020
- Full Text
- View/download PDF
12. Bambusicolous Fomitiporia revisited: multilocus phylogeny reveals a clade of host-exclusive species.
- Author
-
Alves-Silva G, Drechsler-Santos ER, and da Silveira RMB
- Subjects
- DNA, Fungal, Basidiomycota classification, Basidiomycota cytology, Basidiomycota genetics, DNA, Ribosomal Spacer genetics, Host Specificity, Phylogeny, Wood microbiology
- Abstract
Fomitiporia: is a genus of wood-inhabiting Hymenochaetaceae (Agaricomycetes) that includes pathogens and decomposers occurring on a wide array of plant substrates. Some species decay culms of woody bamboos, a poorly known biotic interaction. Four bambusicolous species of Fomitiporia are currently known. However, no studies concerning their phylogenetic relationships have been performed. In order to assess species boundaries and their relationships to each other, we conducted molecular phylogenetic analyses of nuc rDNA internal transcribed spacer region ITS1-5.8S-ITS2 (ITS) and portions of nuc 28S rDNA (28S), RNA polymerase II second largest subunit ( RPB2 ), and translation elongation factor 1-α ( TEF1 ), as well as morphological analyses. Four species that occur on culms of woody bamboos, F. bambusarum, F. spinescens, F. uncinata , and the new species F. bambusipileata , grouped together in an exclusive clade within a primarily Neotropical lineage. The new species differs from all other species in the group by the pileate basidiomata. Hypotheses regarding host-exclusivity are discussed.
- Published
- 2020
- Full Text
- View/download PDF
13. Uromyces rebeccae , sp. nov., a newly described rust on the federally endangered plant, California sea-blite ( Suaeda californica ).
- Author
-
Bruckart WL 3rd, Thomas JL, Abbasi M, Aime MC, Frederick RD, and Tancos MA
- Subjects
- California, Basidiomycota classification, Basidiomycota cytology, Chenopodiaceae parasitology, Endangered Species, Plant Diseases parasitology, Spores, Fungal cytology
- Abstract
Rust disease was observed on populations of Suaeda californica near Morro Bay, California. The pathogen was identified as a species of Uromyces based on teliospore and urediniospore morphology and nuc 28S rDNA sequence analysis. The isolate was compared with previously described species of Uromyces that infect members of Chenopodiaceae, prompting a taxonomic reevaluation of Uromyces species on Suaeda . Herein, Uromyces rebeccae is described. It can be differentiated from the closely related U. chenopodii (syn.: Aecidium chenopodii-fruticosi; U. giganteus ) based on host range, teliospore morphology, and 28S sequence data. The new combination, Uromyces chenopodii-fruticosi , is made for Aecidium chenopodii-fruticosi , the oldest name for Eurasian Suaeda rust. Finally, it was determined that U. giganteus likely does not occur in the United States and that the rust of S. taxifolia in the United States likely comprises a third, yet unnamed taxon, different from both U. rebeccae and U. chenopodii-fruticosi . This is the first record of a rust fungus on S. californica . An identification key for Uromyces species reported on Chenopodiaceae is provided.
- Published
- 2020
- Full Text
- View/download PDF
14. Expansion of the genus Imleria in North America to include Imleria floridana , sp. nov., and Imleria pallida , comb. nov.
- Author
-
Farid A, Franck AR, Bolin J, and Garey JR
- Subjects
- Basidiomycota cytology, Basidiomycota genetics, Basidiomycota isolation & purification, Classification, Florida, Fruiting Bodies, Fungal, Genes, Fungal, Multilocus Sequence Typing, Mycorrhizae genetics, North America, Phylogeny, Spores, Fungal cytology, Basidiomycota classification
- Abstract
Imleria is a small genus of Boletaceae found primarily in the Northern Hemisphere characterized by the light to dark brown hymenophore that stains blue. In Florida, specimens of Imleria were collected that resembled I. badia , a species known primarily from northeastern North America and Europe. Five nuclear loci of these Florida specimens were sequenced and phylogenetically analyzed. A nuc rDNA internal transcribed spacer ITS1-5.8S-ITS2 (ITS) phylogeny of Imleria was generated using primarily uncultured environmental sequences to confirm ectomycorrhizal associations. Based on morphological and molecular data, we describe a new species, Imleria floridana . Results from these analyses also support the new combination Imleria pallida . A lectotype of I. pallida is also established from Charles H. Peck's original material. We discuss the distinguishing characters and species of Imleria found in North America and provide a key to the known worldwide species of Imleria .
- Published
- 2020
- Full Text
- View/download PDF
15. A comparative study of liquid holding restitution of viability after oxidative stress in Ustilago maydis and Saccharomyces cerevisiae cell populations.
- Author
-
Milisavljevic M and Kojic M
- Subjects
- Adaptation, Physiological drug effects, Adaptation, Physiological genetics, Adaptor Proteins, Signal Transducing genetics, Basidiomycota cytology, DNA-Binding Proteins genetics, Desiccation, Endosomal Sorting Complexes Required for Transport genetics, Fungal Proteins genetics, Genes, Fungal, Microbial Viability genetics, Organisms, Genetically Modified, Oxidative Stress genetics, Saccharomyces cerevisiae cytology, Transcription Factors genetics, Basidiomycota drug effects, Basidiomycota genetics, Hydrogen Peroxide pharmacology, Microbial Viability drug effects, Oxidative Stress drug effects, Saccharomyces cerevisiae drug effects, Saccharomyces cerevisiae physiology
- Abstract
The ability of Saccharomyces cerevisiae to reconstitute viability after strong peroxide-induced oxidative stress during liquid holding (LH) in non-nutrient medium has been compared with that of Ustilago maydis. It was found that like U. maydis, S. cerevisiae was capable of reconstituting viability through multiplication of the survivors. However, differences were observed in the pattern of their response: (i) the reconstitution of viability was slower in S. cerevisiae; (ii) before the viability was progressively increasing the treated samples of this fungus reproducibly passed through a phase of additional decrease of the surviving fraction and (iii) the final yields of viable cells attained in S. cerevisiae were below those achieved by U. maydis. The reason for the relative superiority of U. maydis is twofold: (1) early initiated and faster degradation and leakage of the intracellular biomolecules and (2) greater ability of U. maydis cells to recycle damaged and released intracellular compounds. Conceptually similar studies extended to another oxidative-stress-inducing condition, namely desiccation, indicated that the marked differences between these fungi in their patterns of the post-stress regrowth, cellular leakage and macromolecule decomposition are reproduced during LH of desiccated cells. The concordance of the findings obtained upon these two approaches was also corroborated by an analysis of the post-desiccation LH response of U. maydis mutants (adr1, did4, kel1 and tbp1) that were previously identified as defective in post-peroxide LH restitution of viability. We discuss the findings in terms of their possible relevance to the mechanisms of the ecological and evolutionary adaptation of free-living microorganisms to fluctuating and severely inhospitable environments., (Copyright © 2019 Elsevier Inc. All rights reserved.)
- Published
- 2020
- Full Text
- View/download PDF
16. Psiloboletinus is an independent genus sister to Suillus .
- Author
-
Wu G, Wu K, Qi LL, Morozova OV, Alexandrova AV, Gorbunova IA, Li Y, Liu JW, and Yang ZL
- Subjects
- Basidiomycota cytology, Basidiomycota genetics, China, DNA, Fungal genetics, DNA, Ribosomal genetics, Genes, Fungal genetics, Phylogeny, Sequence Analysis, DNA, Species Specificity, Basidiomycota classification
- Abstract
The genus Psiloboletinus was proposed by Rolf Singer in 1945 based on Phylloporus lariceti , a species that associates with Larix in the Altai Mountains of central and eastern Asia. However, this classification has been controversial due to the morphological similarity to known genera Boletinus and Fuscoboletinus . Because of the lack of fresh material to study, the phylogenetic position of Psiloboletinus has remained unknown since its publication. However, the recently described species Suillus foetidus reported from northeast China allows this issue to be reexamined and resolved. Through morphological observations and comparison, we find that S. foetidus is a heterotypic synonym of Ps. lariceti . Furthermore, Psiloboletinus should be retained as an independent genus sister to Suillus based on molecular phylogenetic evidence and morphological features.
- Published
- 2020
- Full Text
- View/download PDF
17. Revision of leccinoid fungi, with emphasis on North American taxa, based on molecular and morphological data.
- Author
-
Kuo M and Ortiz-Santana B
- Subjects
- Basidiomycota cytology, Basidiomycota genetics, DNA, Fungal genetics, DNA, Ribosomal genetics, Genes, Fungal genetics, Mycorrhizae classification, Mycorrhizae cytology, Mycorrhizae genetics, North America, Phylogeny, Sequence Analysis, DNA, Basidiomycota classification
- Abstract
The leccinoid fungi are boletes and related sequestrate mushrooms (Boletaceae, Basidiomycota) that have traditionally been placed in Leccinum, Boletus, Leccinellum , and a handful of other less familiar genera. These mushrooms generally feature scabers or scaber-like dots on the surface of the stipe, and they are often fairly tall and slender when compared with other boletes. They are ectomycorrhizal fungi and appear to be fairly strictly associated with specific trees or groups of related trees. In the present study, we investigate the phylogenetic relationships among the leccinoid fungi and other members of the family Boletaceae using portions of three loci from nuc 28S rDNA (28S), translation elongation factor 1-α ( TEF1 ), and the RNA polymerase II second-largest subunit ( RPB2 ). Two DNA data sets (combined 28S- TEF1 and 28S- TEF1-RPB2 ), comprising sequences from nearly 270 voucher specimens, were evaluated using two different phylogenetic analyses (maximum likelihood and Bayesian inference). Five major clades were obtained, and leccinoid fungi appeared in four of them. Taxonomic proposals supported by our results, representing a broadly circumscribed Leccinum that includes several sequestrate genera, along with Leccinellum , are made.
- Published
- 2020
- Full Text
- View/download PDF
18. Tradeoffs in hyphal traits determine mycelium architecture in saprobic fungi.
- Author
-
Lehmann A, Zheng W, Soutschek K, Roy J, Yurkov AM, and Rillig MC
- Subjects
- Adaptation, Physiological, Ascomycota genetics, Basidiomycota genetics, Biological Variation, Population, Hyphae growth & development, Mucor genetics, Ascomycota cytology, Basidiomycota cytology, Hyphae cytology, Mucor cytology
- Abstract
The fungal mycelium represents the essence of the fungal lifestyle, and understanding how a mycelium is constructed is of fundamental importance in fungal biology and ecology. Previous studies have examined initial developmental patterns or focused on a few strains, often mutants of model species, and frequently grown under non-harmonized growth conditions; these factors currently collectively hamper systematic insights into rules of mycelium architecture. To address this, we here use a broader suite of fungi (31 species including members of the Ascomycota, Basidiomycota and Mucoromycota), all isolated from the same soil, and tested for ten architectural traits under standardized laboratory conditions. We find great variability in traits among the saprobic fungal species, and detect several clear tradeoffs in mycelial architecture, for example between internodal length and hyphal diameter. Within the constraints so identified, we document otherwise great versatility in mycelium architecture in this set of fungi, and there was no evidence of trait 'syndromes' as might be expected. Our results point to an important dimension of fungal properties with likely consequences for coexistence within local communities, as well as for functional complementarity (e.g. decomposition, soil aggregation).
- Published
- 2019
- Full Text
- View/download PDF
19. Investigation of urediospore morphology, histopathology and epidemiological components on wheat plants infected with UV-B-induced mutant strains of Puccinia striiformis f. sp. tritici.
- Author
-
Zhao Y, Cheng P, Li T, Ma J, Zhang Y, and Wang H
- Subjects
- Basidiomycota radiation effects, China, Hyphae cytology, Hyphae growth & development, Spores, Fungal cytology, Spores, Fungal growth & development, Virulence, Basidiomycota cytology, Basidiomycota growth & development, Plant Diseases microbiology, Triticum microbiology, Ultraviolet Rays
- Abstract
Planting resistant cultivars is the most economical and effective measure to control wheat stripe rust caused by Puccinia striiformis f. sp. tritici (Pst), but the cultivars often lose their resistance due to the emergence of new physiological races. The UV-B-irradiated urediospores of the Pst physiological race CYR32 in China were inoculated on wheat cultivar Guinong 22 for screening virulence-mutant strains. CYR32 and mutant strains (CYR32-5 and CYR32-61) before and after UV-B radiation were used to conduct urediospore morphological and histopathological observations and an investigation of epidemiological components. The results showed that UV-B radiation affected the urediospore morphology of each strain. UV-B radiation inhibited urediospore invasion and hyphal elongation, which mainly manifested as decreases in germination rate, quantities of hyphal branches, haustorial mother cells and haustoria and hyphal length. After wheat cultivar Mingxian 169 was inoculated with the UV-B-irradiated urediospores, the incubation period was prolonged, and the infection efficiency, lesion expansion rate, total sporulation quantity and area under the disease progress curve were reduced. The results demonstrated that CYR32-5 and CYR32-61 may have more tolerance to UV-B radiation than CYR32. The results are significant for understanding mechanisms of Pst virulence variations and implementing sustainable management of wheat stripe rust., (© 2019 The Authors. MicrobiologyOpen published by John Wiley & Sons Ltd.)
- Published
- 2019
- Full Text
- View/download PDF
20. Russula swatica: A new species of Russula based on molecular, light microscopy, and scanning electron microscopy analyses from Swat Valley of Khyber Pakhtunkhwa province of Pakistan.
- Author
-
Sarwar S, Aziz T, Hanif M, Ilyas S, and Shaheen S
- Subjects
- Basidiomycota genetics, Basidiomycota ultrastructure, DNA, Fungal chemistry, DNA, Fungal genetics, DNA, Ribosomal Spacer chemistry, DNA, Ribosomal Spacer genetics, Microscopy, Microscopy, Electron, Scanning, Pakistan, Sequence Analysis, DNA, Basidiomycota classification, Basidiomycota cytology, Phylogeny
- Abstract
Himalayan range of Pakistan is one of the diversity rich hotspots of the world. Many areas are yet to be explored here to discover new species of organisms including fungi. During present research, Swat District of Pakistan was explored for fungal diversity. One new species of mushroom Russula swatica (Russulales) is described from Himalayan range of Pakistan and analyzed by light microscopy and scanning electron microscopy as well as by molecular markers. A comprehensive description, photographs, and comparisons with morphologically similar and phylogenetically related species are provided. Conclusions of its phylogenetic relationships within the genus are provided based on the sequence of the nuclear internal transcribed spacer region., (© 2019 Wiley Periodicals, Inc.)
- Published
- 2019
- Full Text
- View/download PDF
21. Vibralactone Z 4 , the first chain-like vibralactone derivative from cultures of the basidiomycete Boreostereum vibrans .
- Author
-
He J, Duan KT, Li ZH, Ai HL, Feng T, and Liu JK
- Subjects
- Antineoplastic Agents chemistry, Basidiomycota cytology, Biosynthetic Pathways, Cell Line, Tumor, Drug Screening Assays, Antitumor, Humans, Lactones chemistry, Magnetic Resonance Spectroscopy, Molecular Structure, Spectrometry, Mass, Electrospray Ionization, Antineoplastic Agents pharmacology, Basidiomycota metabolism, Lactones metabolism, Lactones pharmacology
- Abstract
The first chain-Like vibralactone derivative, vibralactone Z
4 ( 1 ), together with three known ones ( 2-4 ), were isolated from cultures of the basidiomycete Boreostereum vibrans . Vibralactone Z4 ( 1 ) is likely to be a key intermediate from 3 to 4 in their biosynthetic pathway. It showed a weak cytotoxicity to human cancer cell line SW480 (IC50 29.2 ± 1.38 μ M).- Published
- 2019
- Full Text
- View/download PDF
22. A new guaiane sesquiterpene from cultures of the fungus Fulvifomes kanehirae.
- Author
-
Ding JH, Li ZH, Feng T, and Liu JK
- Subjects
- Basidiomycota cytology, Culture Techniques, Isoenzymes, Magnetic Resonance Spectroscopy, Molecular Structure, Sesquiterpenes, Guaiane isolation & purification, Sesquiterpenes, Guaiane pharmacology, 11-beta-Hydroxysteroid Dehydrogenases antagonists & inhibitors, Basidiomycota chemistry, Sesquiterpenes, Guaiane chemistry
- Abstract
A new guaiane sesquiterpene (1) was isolated from cultures of the fungus Fulvifomes kanehirae. Its structure was elucidated by spectroscopic methods including extensive 2D-NMR techniques. Meanwhile, the compound was tested for its inhibitory activity against isozymes of 11β-hydroxysteroid dehydrogenases (11β-HSD).
- Published
- 2019
- Full Text
- View/download PDF
23. The new species Puccinia telimutans causes Mexican potato rust disease of wild potatoes and shows a unique telial metamorphosis.
- Author
-
Otálora MAG and Berndt R
- Subjects
- Basidiomycota cytology, Mexico, Microscopy, Spores, Fungal cytology, Spores, Fungal growth & development, Basidiomycota classification, Basidiomycota isolation & purification, Plant Diseases microbiology, Solanum tuberosum microbiology
- Abstract
Puccinia telimutans is described as a new species of rust fungi (Basidiomycota, Pucciniales) and causal agent of Mexican potato rust disease of the endemic wild potatoes Solanum demissum and S. verrucosum from Mexico. It is microcyclic and produces telia that show a unique succession of one-celled, catenulate teliospores that germinate upon maturity, followed by resting teliospores that are pedicellate and two-celled. Puccinia telimutans appears to be restricted to Mexico and has formerly been confused with P. pittieriana, which causes common potato rust in South America.
- Published
- 2019
- Full Text
- View/download PDF
24. Hidden fungal diversity from the Neotropics: Geastrum hirsutum, G. schweinitzii (Basidiomycota, Geastrales) and their allies.
- Author
-
Accioly T, Sousa JO, Moreau PA, Lécuru C, Silva BDB, Roy M, Gardes M, Baseia IG, and Martín MP
- Subjects
- Americas, Basidiomycota cytology, DNA Barcoding, Taxonomic, DNA, Fungal genetics, Genetic Variation, Phylogeny, Phylogeography, Species Specificity, Tropical Climate, Basidiomycota classification, Basidiomycota genetics
- Abstract
Taxonomy of Geastrum species in the neotropics has been subject to divergent opinions among specialists. In our study, type collections were reassessed and compared with recent collections in order to delimit species in Geastrum, sect. Myceliostroma, subsect. Epigaea. A thorough review of morphologic features combined with barcode and phylogenetic analyses (ITS and LSU nrDNA) revealed six new species (G. neoamericanum, G. rubellum, G. brunneocapillatum, G. baculicrystallum, G. rubropusillum and G. courtecuissei). In additon, the presence of hairs on the exoperidium, a commonly used feature to diagnose Geastrum species, proved to be ineffective because it is a derived character within subsect. Epigaea., Competing Interests: The authors have declared that no competing interests exist.
- Published
- 2019
- Full Text
- View/download PDF
25. Efficient bioconversion of enzymatic corncob hydrolysate into biomass and lipids by oleaginous yeast Rhodosporidium paludigenum KM281510.
- Author
-
Chaiyaso T, Manowattana A, Techapun C, and Watanabe M
- Subjects
- Arabinose metabolism, Basidiomycota cytology, Bioreactors, Fermentation, Hydrogen-Ion Concentration, Hydrolysis, Lipids chemistry, Lipids isolation & purification, Temperature, Xylose metabolism, Basidiomycota metabolism, Biomass, Lipids biosynthesis, Waste Management methods, Zea mays chemistry
- Abstract
This study aims to valorize of enzymatic corncob hydrolysate (ECH) for biomass and lipid productions via microbial bioconversion by the efficient oleaginous yeast Rhodosporidium paludigenum KM281510. Biomass (5.63 g/L), lipids (3.29 g/L), and lipid content (58% (g/g)) were observed by batch cultivation in shaking flask. The effect of total sugar concentration in ECH, agitation rate, temperature, and initial pH were investigated in both batch and fed-batch cultivations by shaking flask and 3.0 L airlift bioreactor. Biomass, lipids, and lipid content of 27.77 g/L, 20.27 g/L, and 70% (g/g) were obtained with 100 g/L total sugar (68 g/L glucose, 29 g/L xylose, and 3 g/L arabinose), pH 6.5, 25 °C, 6.0 vvm, for 7 days by batch cultivation in bioreactor. Surprisingly, production parameters were improved by fed-batch, wherein these promising high biomass (36.06 g/L), lipid production (25.12 g/L), and lipid productivity (2.52 g/L/d) values were achieved. Moreover, fed-batch cultivation promoted the utilization of xylose (2.5-times) and arabinose (3.4-times) higher than batch cultivation, achieving lipid content (70% (g/g)) with oleic acid (53%). These results would be helpful for understanding the comprehensive utilization of ECH, especially the pentose sugars, for growth and lipogenesis of oleaginous yeast as well as being a qualified biodiesel feedstock.
- Published
- 2019
- Full Text
- View/download PDF
26. Automatic detection and counting of urediniospores of Puccinia striiformis f. sp. tritici using spore traps and image processing.
- Author
-
Lei Y, Yao Z, and He D
- Subjects
- Algorithms, Basidiomycota cytology, Image Processing, Computer-Assisted, Plant Diseases microbiology, Spores, Fungal cytology, Triticum microbiology
- Abstract
The quantitative monitoring of airborne urediniospores of Puccinia striiformis f. sp. tritici (Pst) using spore trap devices in wheat fields is an important process for devising strategies early and effectively controlling wheat stripe rust. The traditional microscopic spore counting method mainly relies on naked-eye observation. Because of the great number of trapped spores, this method is labour intensive and time-consuming and has low counting efficiency, sometimes leading to huge errors; thus, an alternative method is required. In this paper, a new algorithm was proposed for the automatic detection and counting of urediniospores of Pst, based on digital image processing. First, images of urediniospores were collected using portable volumetric spore traps in an indoor simulation. Then, the urediniospores were automatically detected and counted using a series of image processing approaches, including image segmentation using the K-means clustering algorithm, image pre-processing, the identification of touching urediniospores based on their shape factor and area, and touching urediniospore contour segmentation based on concavity and contour segment merging. This automatic counting algorithm was compared with the watershed transformation algorithm. The results show that the proposed algorithm is efficient and accurate for the automatic detection and counting of trapped urediniospores. It can provide technical support for the development of online airborne urediniospore monitoring equipment.
- Published
- 2018
- Full Text
- View/download PDF
27. Novel diversity in Lactifluus section Gerardii from Asia: five new species with pleurotoid or small agaricoid basidiocarps.
- Author
-
De Crop E, Hampe F, Wisitrassameewong K, Stubbe D, Nuytinck J, and Verbeken A
- Subjects
- Basidiomycota cytology, Basidiomycota growth & development, Cluster Analysis, DNA, Fungal chemistry, DNA, Fungal genetics, DNA, Ribosomal chemistry, DNA, Ribosomal genetics, DNA, Ribosomal Spacer chemistry, DNA, Ribosomal Spacer genetics, Genes, rRNA, Microscopy, Mycorrhizae cytology, Mycorrhizae growth & development, RNA, Fungal genetics, RNA, Ribosomal, 28S genetics, RNA, Ribosomal, 5.8S genetics, Sequence Analysis, DNA, Spores, Fungal cytology, Thailand, Basidiomycota classification, Basidiomycota genetics, Fruiting Bodies, Fungal growth & development, Mycorrhizae classification, Mycorrhizae genetics, Phylogeny
- Abstract
The ectomycorrhizal milkcap genus Lactifluus (Russulaceae) is commonly found in tropical and subtropical forests of Southeast Asia. During several sampling expeditions in Thailand, multiple collections of Lactifluus (Lf.) species with pleurotoid or small agaricoid basidiocarps were found. A molecular study was combined with a morphological study, in which the collections were compared with herbarium material. The molecular study indicated that four Thai collections belonged to undescribed species within Lactifluus section Gerardii, as was also the case for herbarium collections of a pleurotoid species from Nepal. One other collection from Thailand appeared closely related to Lf. uyedae, known only from Japan. Five species are described as new in the genus: Lf. auriculiformis, Lf. gerardiellus, Lf. bhandaryi, Lf. pulchrellus, and Lf. raspei.
- Published
- 2018
- Full Text
- View/download PDF
28. Identifying and naming the currently known diversity of the genus Hydnum, with an emphasis on European and North American taxa.
- Author
-
Niskanen T, Liimatainen K, Nuytinck J, Kirk P, Ibarguren IO, Garibay-Orijel R, Norvell L, Huhtinen S, Kytövuori I, Ruotsalainen J, Niemelä T, Ammirati JF, and Tedersoo L
- Subjects
- Basidiomycota cytology, Basidiomycota growth & development, Biometry, DNA Barcoding, Taxonomic, DNA, Fungal chemistry, DNA, Fungal genetics, DNA, Ribosomal chemistry, DNA, Ribosomal genetics, DNA, Ribosomal Spacer chemistry, DNA, Ribosomal Spacer genetics, Europe, Microscopy, North America, Sequence Analysis, DNA, Spores, Fungal cytology, Terminology as Topic, Basidiomycota classification, Basidiomycota isolation & purification, Fruiting Bodies, Fungal growth & development
- Abstract
In this study, 49 species of Hydnum are recognized worldwide. Twenty-two of them are described here as new species. Epitypes are proposed for H. repandum and H. rufescens. The majority of the species are currently known only from a single continent. The barcodes produced in this study are deposited in the RefSeq database and used as a basis to name species hypotheses in UNITE. Eleven infrageneric clades recovered in a phylogenetic analysis are supported by morphological characteristics and formally recognized: subgenera Alba, Hydnum, Pallida, and Rufescentia; sections Hydnum, Olympica, Magnorufescentia, and Rufescentia; and subsections Mulsicoloria, Rufescentia, and Tenuiformia.
- Published
- 2018
- Full Text
- View/download PDF
29. Hymenogaster macmurphyi and Splanchnomyces behrii are sequestrate species of Xerocomellus from the western United States.
- Author
-
Smith ME, Castellano MA, and Frank JL
- Subjects
- Agaricales cytology, Agaricales genetics, Basidiomycota cytology, Basidiomycota genetics, Biological Evolution, DNA, Fungal genetics, DNA, Ribosomal genetics, Genes, Fungal genetics, Sequence Analysis, DNA, United States, Agaricales classification, Basidiomycota classification, Phylogeny
- Abstract
Hymenogaster is an ectomycorrhizal genus of brown-spored sequestrate fungi that is related to the mushroom-forming genera Hebeloma and Alnicola (Agaricales). However, because of difficulties in morphological taxonomy of sequestrate fungi, Hymenogaster has become a polyphyletic repository for a variety of unrelated brown-spored sequestrate species. During studies of ectomycorrhizal ecology and sequestrate fungal evolution in the western USA, we encountered specimens of a morphologically unique species. It was originally described as Hymenogaster macmurphyi, but our morphological and molecular analyses indicate that it is not closely related to Hymenogaster. Phylogenetic analyses of multiple gene regions indicate that H. macmurphyi is actually a member of the Boletineae (Boletales, Basidiomycota) and is nested within the epigeous genus Xerocomellus, distantly related to any of the other known genera of sequestrate Boletales. While examining additional herbarium collections, we came upon isotype material of Splanchnomyces behrii, which represents a closely related species. Here we document the morphology and phylogenetic affinities of these unusual sequestrate Boletineae and transfer both species to Xerocomellus as X. macmurphyi and X. behrii. During our study, we also noted that the sequestrate taxon Rhopalogaster transversarius is nested within the epigeous genus Suillus.
- Published
- 2018
- Full Text
- View/download PDF
30. Long-term cryopreservation of non-spore-forming fungi in Microbank™ beads for plant pathological investigations.
- Author
-
Lakshman DK, Singh V, and Camacho ME
- Subjects
- Ascomycota cytology, Ascomycota growth & development, Basidiomycota cytology, Basidiomycota growth & development, Basidiomycota physiology, DNA, Fungal chemistry, DNA, Fungal genetics, DNA, Ribosomal Spacer chemistry, DNA, Ribosomal Spacer genetics, Mutation, Sequence Analysis, DNA, Ascomycota isolation & purification, Ascomycota physiology, Basidiomycota isolation & purification, Cryopreservation methods, Microbial Viability, Microbiological Techniques methods, Plant Diseases microbiology
- Abstract
Long-term preservation of experimental fungi without genetic, morphological, and pathogenic changes is of paramount importance in mycological and plant pathological investigations. Several cryogenic and non-cryogenic methods are available for the preservation of fungi, but the methods can be cumbersome, hazardous, expensive, and often not suitable for long-term storage of non-spore-forming (sterile) fungi. A method of preservation of spore-forming fungi in commercially available porous beads (Micrbank™) under cryogenic condition was successfully tested for three non-spore-forming basidiomycetes genera: Rhizoctonia solani (teleomorph: Thanatephorus cucumeris) (n = 19), Ceratobasidium species (n = 1), and Waitea circinata (n = 3), and a non-spore forming ascomycetes, Sclerotinia sclerotiorum (n = 1). For comparison, spore-forming ascomycetous fungi, Alternaria alternata (n = 1), Bauveria basiana (n = 2), Botrytis cinerea (n = 1), Fusarium oxysporum f.sp. gladiolii (n = 1), Trichoderma spp. (n = 3), and Thielaviopsis basicola (n = 2) were also cryopreserved in Microbank beads. Viable fungal isolates of all test species were retrieved after five years of storage at -80 °C, which was longer than the viabilities of the corresponding isolates cryopreserved in agar plugs or colonized wheat seeds. Fungi revived from the Microbank beads maintained identical morphology and cultural characteristics of the parent isolates. Randomly selected Rhizoctonia isolates revived from the Microbank beads maintained respective pathological properties of the parent isolates; also, no mutation was detected in the internal transcribed spacer (ITS) ribosomal DNA when compared with respective cultures maintained at ambient temperature. This finding demonstrated the utility of cryopreservation in Microbank beads as a convenient alternative to conventional long-term preservation of a wide group of fungal cultures for plant pathological investigations and serves as the first report of using porous beads under cryogenic conditions for long-term storage of sterile fungi., (Published by Elsevier B.V.)
- Published
- 2018
- Full Text
- View/download PDF
31. Fungal spore diversity reflects substrate-specific deposition challenges.
- Author
-
Calhim S, Halme P, Petersen JH, Læssøe T, Bässler C, and Heilmann-Clausen J
- Subjects
- Ascomycota cytology, Basidiomycota cytology, Mycorrhizae cytology, Population Dynamics, Soil Microbiology, Spores, Fungal cytology, Ascomycota classification, Basidiomycota classification, Spores, Fungal classification
- Abstract
Sexual spores are important for the dispersal and population dynamics of fungi. They show remarkable morphological diversity, but the underlying forces driving spore evolution are poorly known. We investigated whether trophic status and substrate associations are associated with morphology in 787 macrofungal genera. We show that both spore size and ornamentation are associated with trophic specialization, so that large and ornamented spores are more probable in ectomycorrhizal than in saprotrophic genera. This suggests that spore ornamentation facilitates attachment to arthropod vectors, which ectomycorrhizal species may need to reach lower soil layers. Elongated spore shapes are more common in saprotrophic taxa, and genera associated with above ground substrates are more likely to have allantoid (curved elongated) spores, probably to lower the risk of wash out by precipitation. Overall, our results suggest that safe arrival on specific substrates is a more important driver of evolution in spore morphology than dispersal per se.
- Published
- 2018
- Full Text
- View/download PDF
32. Two new endophytic Atractiellomycetes, Atractidochium hillariae and Proceropycnis hameedii.
- Author
-
Aime MC, Urbina H, Liber JA, Bonito G, and Oono R
- Subjects
- Animals, Basidiomycota cytology, Basidiomycota genetics, Cluster Analysis, DNA, Fungal chemistry, DNA, Fungal genetics, DNA, Ribosomal chemistry, DNA, Ribosomal genetics, DNA, Ribosomal Spacer chemistry, DNA, Ribosomal Spacer genetics, Endophytes genetics, Genes, rRNA, Microbiological Techniques, Microscopy, Plant Leaves microbiology, Plant Roots microbiology, RNA, Fungal genetics, RNA, Ribosomal, 18S genetics, RNA, Ribosomal, 28S genetics, RNA, Ribosomal, 5.8S genetics, Sequence Analysis, DNA, Basidiomycota classification, Basidiomycota isolation & purification, Endophytes classification, Endophytes isolation & purification, Phylogeny, Pinus taeda microbiology, Populus microbiology
- Abstract
Sterile fungal isolates are often recovered in leaf and root endophytic studies, although these seldom play a significant role in downstream analyses. The authors sought to identify and characterize two such endophytes-one representing the most commonly recovered fungal isolate in recent studies of needle endophytes of Pinus taeda and the other representing a rarely isolated root endophyte of Populus trichocarpa. Both are shown by DNA sequencing to be undescribed species of Atractiellomycetes (Pucciniomycotina, Basidiomycota), a poorly characterized class of mostly plant-associated and presumably saprobic microfungi. The authors describe the new genus and species Atractidochium hillariae (Phleogenaceae) and the new species Proceropycnis hameedii (Hoehnelomycetaceae), both in the Atractiellales, to accommodate these unusual isolates. Following incubations of 1-2 mo, A. hillariae produces minute white sporodochia, similar to those produced by several other members of Atractiellales, whereas Pr. hameedii forms conidia singly or in chains in a manner similar to its sister species Pr. pinicola. Additionally, we provide a taxonomic revision of Atractiellomycetes based on multilocus analyses and propose the new genera Neogloea (Helicogloeaceae) and Bourdotigloea (Phleogenaceae) to accommodate ex-Helicogloea species that are not congeneric with the type H. lagerheimii. Atractiellomycetes consists of a single order, Atractiellales, and three families, Hoehnelomycetaceae, Phleogenaceae, and Helicogloeaceae. Accumulated evidence suggests that Atractiellomycetes species are common but infrequently isolated members of plant foliar and root endobiomes.
- Published
- 2018
- Full Text
- View/download PDF
33. Cell-specific expression of plant nutrient transporter genes in orchid mycorrhizae.
- Author
-
Fochi V, Falla N, Girlanda M, Perotto S, and Balestrini R
- Subjects
- Basidiomycota cytology, Biological Transport, Laser Capture Microdissection, Mycorrhizae cytology, Nitrogen metabolism, Orchidaceae cytology, Orchidaceae microbiology, Organ Specificity, Plant Proteins genetics, Plant Roots cytology, Plant Roots genetics, Plant Roots microbiology, Up-Regulation, Basidiomycota physiology, Gene Expression Regulation, Plant, Membrane Transport Proteins genetics, Mycorrhizae physiology, Orchidaceae genetics, Symbiosis
- Abstract
Orchid mycorrhizal protocorms and roots are heterogeneous structures composed of different plant cell-types, where cells colonized by intracellular fungal coils (the pelotons) are close to non-colonized plant cells. Moreover, the fungal coils undergo rapid turnover inside the colonized cells, so that plant cells containing coils at different developmental stages can be observed in the same tissue section. Here, we have investigated by laser microdissection (LMD) the localization of specific plant gene transcripts in different cell-type populations collected from mycorrhizal protocorms and roots of the Mediterranean orchid Serapias vomeracea colonized by Tulasnella calospora. RNAs extracted from the different cell-type populations have been used to study plant gene expression, focusing on genes potentially involved in N uptake and transport and previously identified as up-regulated in symbiotic protocorms. Results clearly showed that some plant N transporters are differentially expressed in cells containing fungal coils at different developmental stages, as well as in non-colonized cells, and allowed the identification of new functional markers associated to coil-containing cells., (Copyright © 2017 Elsevier B.V. All rights reserved.)
- Published
- 2017
- Full Text
- View/download PDF
34. Use of the yeast-like cells of Tremella fuciformis as a cell factory to produce a Pleurotus ostreatus hydrophobin.
- Author
-
Zhu H, Liu D, Wang Y, Ren D, Zheng L, Chen L, and Ma A
- Subjects
- Agrobacterium genetics, Emulsifying Agents, Fungal Proteins metabolism, Recombinant Proteins metabolism, Yeasts, Agaricales genetics, Basidiomycota cytology, Basidiomycota genetics, Basidiomycota metabolism, Fungal Proteins genetics, Recombinant Proteins genetics
- Abstract
Objectives: To obtain hydrophobin, a Class I hydrophobin gene, Po.hyd from Pleurotus ostreatus, was transformed into the yeast-like cells of Tremella fuciformis using Agrobacterium tumefaciens., Results: The hydrophobin Po.HYD from P. ostreatus was heterogeneously expressed by the yeast-like cells of T. fuciformis. Plasmids harboring the Po.hyd gene driven by endogenous glyceraldehyde-3-phosphate dehydrogenase promoter were transformed by A. tumefaciens. The integration and expression of the rPo.HYD in the T. fuciformis cells were confirmed by PCR, Southern blot, fluorescence microscopy and quantitative real-time PCR. SDS-PAGE demonstrated that the rPo.HYD was extracted with the expected MW of 14 kDa. The yield of purified rPo.HYD was 0.58 mg/g dry wt. The protein, with its ability to stabilize oil droplets, exhibited a better emulsifying activity than the typical food emulsifiers Tween 20 and sodium caseinate., Conclusion: Tremella fuciformis can be used as a cell factory to produce hydrophobin on a large scale for the food industry.
- Published
- 2017
- Full Text
- View/download PDF
35. Phylogeny and taxonomy of Echinodontium and related genera.
- Author
-
Liu SL, Zhao Y, Dai YC, Nakasone KK, and He SH
- Subjects
- Basidiomycota cytology, Basidiomycota genetics, Basidiomycota isolation & purification, China, Classification, DNA, Fungal genetics, DNA, Ribosomal Spacer genetics, Fruiting Bodies, Fungal, RNA, Ribosomal, 28S genetics, Spores, Fungal, Taiwan, Basidiomycota classification, Phylogeny
- Abstract
The phylogenetic relationship of eight species of Echinodontium, Laurilia, and Perplexostereum of Russulales were analyzed based on sequences of the nuc rDNA ITS1-5.8S-ITS2 (ITS [internal transcribed spacer]) and D1-D2 domains of nuc 28S rDNA (28S). Our results show that Echinodontium tinctorium, E. ryvardenii, and E. tsugicola represent Echinodontium sensu stricto. Based on morphological and phylogenetic evidence, the new genus Echinodontiellum is established to accommodate Echinodontium japonicum. Amylostereum, Echinodontium, Echinodontiellum, and Larssoniporia form the Echinodontiaceae clade. The Bondarzewiaceae clade includes Bondarzewia, Heterobasidion, Laurilia, and Lauriliella. The new genus Lauriliella is established for the species initially described as Stereum taxodii and Lauriliella taiwanensis new to science. The monotypic genus Perplexostereum forms a distinct clade. A key to the genera in the Echinodontiaceae and Bondarzewiaceae as well to Perplexostereum is provided.
- Published
- 2017
- Full Text
- View/download PDF
36. Entyloma helianthi: identification and characterization of the causal agent of sunflower white leaf smut.
- Author
-
Rooney-Latham S, Lutz M, Blomquist CL, Romberg MK, Scheck HJ, and Piątek M
- Subjects
- Basidiomycota cytology, Basidiomycota genetics, California, Cluster Analysis, DNA, Fungal chemistry, DNA, Fungal genetics, DNA, Plant chemistry, DNA, Plant genetics, DNA, Ribosomal Spacer chemistry, DNA, Ribosomal Spacer genetics, Microscopy, Phylogeny, RNA, Ribosomal, 5.8S genetics, Sequence Analysis, DNA, Spores, Fungal cytology, Basidiomycota classification, Basidiomycota isolation & purification, Helianthus microbiology, Plant Diseases microbiology
- Abstract
White leaf smut is a minor foliar disease of sunflower (Helianthus annuus) in the United States. The disease occurs primarily in greenhouse-grown sunflowers in California and causes leaf spot, defoliation, and a reduction in yield and crop value. Historically, many Entyloma specimens with similar morphological characters, but infecting diverse plant genera including Helianthus, were called Entyloma polysporum. Recent comparative morphological and molecular work has shown that Entyloma species infect hosts within a single genus or species, suggesting that the sunflower Entyloma species may not be E. polysporum. In 2015, sunflower leaf smut material was collected from ornamental sunflowers in a greenhouse in Santa Barbara County, California. Morphologically, this species differed from E. polysporum in having smaller, more regular-shaped teliospores and prominently developed conidiophores with cylindrical conidia. The rDNA ITS1-5.8S-ITS2 (internal transcribed spacer [ITS]) region of the sunflower leaf smut was phylogenetically distinct from all previously sequenced Entyloma species and found only on H. annuus. This study confirms that the sunflower leaf smut pathogen represents a novel species, Entyloma helianthi. Possible misidentification of the anamorphic stage of Entyloma helianthi as another leaf spot pathogen, Ramularia helianthi, is also discussed.
- Published
- 2017
- Full Text
- View/download PDF
37. The genus Pulveroboletus (Boletaceae, Boletales) in China.
- Author
-
Zeng NK, Liang ZQ, Tang LP, Li YC, and Yang ZL
- Subjects
- Basidiomycota cytology, Basidiomycota genetics, China, Cluster Analysis, DNA, Fungal chemistry, DNA, Fungal genetics, DNA, Ribosomal chemistry, DNA, Ribosomal genetics, Microscopy, Peptide Elongation Factor 1 genetics, Phylogeny, RNA, Ribosomal, 28S genetics, RNA, Ribosomal, 5.8S genetics, Sequence Analysis, DNA, Basidiomycota classification, Basidiomycota isolation & purification
- Abstract
Species of Pulveroboletus (Boletaceae, Boletales) in China are investigated on the basis of morphology and molecular phylogenetic analyses of DNA sequences from nuc rDNA region encompassing the internal transcribed spacers 1 and 2, along with the 5.8S rDNA (ITS) and nuc 28S rDNA D1-D2 domains (28S) and sequences from the translation elongation factor 1-α gene (TEF1). Nine species are recognized in the country, three of them are described as new: P. flaviscabrosus, P. rubroscabrosus, and P. subrufus, five of them are previous described taxa: P. brunneopunctatus, P. brunneoscabrosus, P. macrosporus, P. reticulopileus, and P. sinensis, the remaining one is tentatively named P. cf. ridleyi, which will be further studied in the future. A key to the Chinese taxa of the genus is provided. Unexpectedly, the current study did not identify disjunct populations of Pulveroboletus species in East Asia and North/Central America.
- Published
- 2017
- Full Text
- View/download PDF
38. Chromium tolerance, oxidative stress response, morphological characteristics, and FTIR studies of phytopathogenic fungus Sclerotium rolfsii.
- Author
-
Rafi S, Shoaib A, Awan ZA, Rizvi NB, Nafisa, and Shafiq M
- Subjects
- Antioxidants analysis, Basidiomycota cytology, Basidiomycota enzymology, Culture Media chemistry, Hyphae cytology, Hyphae drug effects, Spectroscopy, Fourier Transform Infrared, Temperature, Basidiomycota drug effects, Basidiomycota physiology, Chromium metabolism, Growth Inhibitors metabolism, Growth Substances metabolism, Oxidative Stress
- Abstract
Sclerotium rolfsii is one of the most destructive fungal plant pathogens that can infect over 500 plants and can adapt to diverse environmental conditions. The present research work was carried out to evaluate the impact of both hexa- and trivalent chromium (Cr) on growth, morphology, enzymatic characteristics, and metal accumulation in S. rolfsii under laboratory conditions. Experiments were performed in both malt extract broth and agar growth medium amended with six different concentrations (10, 20, 40, 60, 80, and 100 ppm) of each Cr(III) and Cr(VI) ions inoculated with fungus and incubated for 6-7 days at 25 ± 3 °C. In broth medium, the total protein content was declined and activities of antioxidant enzymes were increased with an increase in metal concentrations. Lower concentrations (10 ppm) of the metal ions stimulated the growth of fungus and higher concentrations (60-100) inhibited it. The Fourier transform infrared spectroscopy (FTIR) assessment showed hydroxyl, carboxyl, and amine groups as major metal binding sites. In agar medium, tolerance index was decreased up to 0.56 at 10-80 ppm of Cr(III) and up to 0.62 at 10-60 ppm of Cr(VI). Considerable modifications were observed in hyphal and sclerotial morphology with an increase in concentration of metal ions. The current study concluded that interference of Cr with growth and physiological process of S. rolfsii could affect its infection level on its host plant. This study provides important information regarding cultivation of susceptible plant varieties in Cr-polluted soil as evidenced by pathogen growth up to 50 ppm of Cr(III) and Cr(VI) ions.
- Published
- 2017
- Full Text
- View/download PDF
39. Optimization of laccase production from Marasmiellus palmivorus LA1 by Taguchi method of Design of experiments.
- Author
-
Chenthamarakshan A, Parambayil N, Miziriya N, Soumya PS, Lakshmi MS, Ramgopal A, Dileep A, and Nambisan P
- Subjects
- Bioreactors standards, Cell Proliferation physiology, Computer Simulation, Culture Media metabolism, Culture Media standards, Hydrogen-Ion Concentration, India, Industrial Microbiology methods, Industrial Microbiology standards, Laccase isolation & purification, Models, Biological, Quality Control, Temperature, Basidiomycota cytology, Basidiomycota metabolism, Bioreactors microbiology, Galactose metabolism, Laccase biosynthesis, Models, Statistical
- Abstract
Background: Fungal laccase has profound applications in different fields of biotechnology due to its broad specificity and high redox potential. Any successful application of the enzyme requires large scale production. As laccase production is highly dependent on medium components and cultural conditions, optimization of the same is essential for efficient product production., Results: Production of laccase by fungal strain Marasmiellus palmivorus LA1 under solid state fermentation was optimized by the Taguchi design of experiments (DOE) methodology. An orthogonal array (L8) was designed using Qualitek-4 software to study the interactions and relative influence of the seven selected factors by one factor at a time approach. The optimum condition formulated was temperature (28 °C), pH (5), galactose (0.8%w/v), cupric sulphate (3 mM), inoculum concentration (number of mycelial agar pieces) (6Nos.) and substrate length (0.05 m). Overall yield increase of 17.6 fold was obtained after optimization. Statistical optimization leads to the elimination of an insignificant medium component ammonium dihydrogen phosphate from the process and contributes to a 1.06 fold increase in enzyme production. A final production of 667.4 ± 13 IU/mL laccase activity paves way for the application of this strain for industrial applications., Conclusion: Study optimized lignin degrading laccases from Marasmiellus palmivorus LA1. This laccases can thus be used for further applications in different scales of production after analyzing the properties of the enzyme. Study also confirmed the use of taguchi method for optimizations of product production.
- Published
- 2017
- Full Text
- View/download PDF
40. Azomethine based nano-chemicals: Development, in vitro and in vivo fungicidal evaluation against Sclerotium rolfsii, Rhizoctonia bataticola and Rhizoctonia solani.
- Author
-
Mondal P, Kumar R, and Gogoi R
- Subjects
- Basidiomycota cytology, Micelles, Nanoparticles chemistry, Nanoparticles toxicity, Nanoparticles ultrastructure, Nanotechnology, Polyethylene Glycols chemistry, Polyethylene Glycols toxicity, Rhizoctonia cytology, Azo Compounds chemistry, Azo Compounds toxicity, Basidiomycota drug effects, Fungicides, Industrial chemistry, Fungicides, Industrial toxicity, Rhizoctonia drug effects, Thiosemicarbazones chemistry, Thiosemicarbazones toxicity
- Abstract
Fungal diseases posing a severe threat to the production of pulses, a major protein source, necessitates the need of new highly efficient antifungal agents. The present study was aimed to develop azomethine based nano-fungicides for protecting the crop from fungal pathogens and subsequent yield losses. The protocol for the formation of nano-azomethines was generated and standardized. Technically pure azomethines were transformed into their nano-forms exploiting polyethylene glycol as the surface stabilizer. Characterization was performed by optical (imaging) probe (Zetasizer) and electron probe (TEM) characterization techniques. The mean particle sizes of all nano-fungicides were below 100nm. In vitro fungicidal potential of nano-chemicals was increased by 2 times in comparison to that of conventional sized azomethines against pathogenic fungi, namely, Rhizoctonia solani, Rhizoctonia bataticola and Sclerotium rolfsii. The performance of nano-chemicals in pot experiment study was also superior to conventional ones as antifungal agent., (Copyright © 2016 Elsevier Inc. All rights reserved.)
- Published
- 2017
- Full Text
- View/download PDF
41. Cladosporium cladosporioides and Cladosporium pseudocladosporioides as potential new fungal antagonists of Puccinia horiana Henn., the causal agent of chrysanthemum white rust.
- Author
-
Torres DE, Rojas-Martínez RI, Zavaleta-Mejía E, Guevara-Fefer P, Márquez-Guzmán GJ, and Pérez-Martínez C
- Subjects
- Actins genetics, Basidiomycota cytology, Basidiomycota drug effects, Bayes Theorem, Biological Assay, Cellulase metabolism, Chitinases pharmacology, Chrysanthemum drug effects, Cladosporium cytology, Cladosporium isolation & purification, Cladosporium ultrastructure, Culture Media pharmacology, DNA, Intergenic genetics, Peptide Elongation Factor 1 genetics, Phylogeny, Sequence Analysis, DNA, Basidiomycota physiology, Chrysanthemum microbiology, Cladosporium physiology, Plant Diseases microbiology
- Abstract
Puccinia horiana Hennings, the causal agent of chrysanthemum white rust, is a worldwide quarantine organism and one of the most important fungal pathogens of Chrysanthemum × morifolium cultivars, which are used for cut flowers and as potted plants in commercial production regions of the world. It was previously reported to be controlled by Lecanicillium lecanii, Cladosporium sphaerospermum, C. uredinicola and Aphanocladium album, due to their antagonistic and hyperparasitic effects. We report novel antagonist species on Puccinia horiana. Fungi isolated from rust pustules in a commercial greenhouse from Villa Guerrero, México, were identified as Cladosporium cladosporioides and Cladosporium pseudocladosporioides based upon molecular analysis and morphological characters. The antagonism of C. cladosporioides and C. pseudocladosporioides on chrysanthemum white rust was studied using light and electron microscopy in vitro at the host/parasite interface. Cladosporium cladosporioides and C. pseudocladosporioides grew towards the white rust teliospores and colonized the sporogenous cells, but no direct penetration of teliospores was observed; however, the structure and cytoplasm of teliospores were altered. The two Cladosporium spp. were able to grow on media containing laminarin, but not when chitin was used as the sole carbon source; these results suggest that they are able to produce glucanases. Results from the study indicate that both Cladosporium species had potential as biological control agents of chrysanthemum white rust., Competing Interests: The authors have declared that no competing interests exist.
- Published
- 2017
- Full Text
- View/download PDF
42. Morphological and molecular evidence for three new species of Coltricia (Hymenochaetaceae, Basidiomycota) from southern China.
- Author
-
Bian LS and Dai YC
- Subjects
- Basidiomycota cytology, Basidiomycota genetics, China, Cluster Analysis, DNA, Fungal chemistry, DNA, Fungal genetics, DNA, Ribosomal chemistry, DNA, Ribosomal genetics, DNA, Ribosomal Spacer chemistry, DNA, Ribosomal Spacer genetics, Microscopy, Phylogeny, RNA Polymerase II genetics, RNA, Ribosomal, 28S genetics, RNA, Ribosomal, 5.8S genetics, Sequence Analysis, DNA, Basidiomycota classification, Basidiomycota isolation & purification
- Abstract
Three new species of Coltricia from southern China are described on the basis of morphological characters and molecular analyses. Phylogenetic analyses based on nuc rDNA ITS1-5.8S-ITS2 and partial 28S rDNA, and partial sequences of genes for RNA polymerase II subunits 1 and 2 confirmed the generic placement of the three new species. Coltricia lateralis is characterized by small, laterally stipitate basidiocarps, obtuse pileus margin, cinnamon-buff to honey yellow pore surface, and broadly ellipsoid basidiospores that measure 7-8 × 5-6 µm. Coltricia rigida is characterized by large, woody-hard fan-shaped basidiocarps, small pores (7-8 per mm), presence of septate sclerified hyphae, and subglobose to globose basidiospores that measure 6-7 × 5-6.5 μm. Coltricia wenshanensis is characterized by centrally stipitate basidiocarps, a distinctly concentrically zonate and sulcate pileal surface, large pores (0.5-2 per mm), and broadly ellipsoid to subglobose basidiospores that measure 7.5-8 × 6-7 µm.
- Published
- 2017
- Full Text
- View/download PDF
43. Two new species of Phylloporus from Bangladesh, with morphological and molecular evidence.
- Author
-
Hosen I and Li TH
- Subjects
- Bangladesh, Basidiomycota cytology, Basidiomycota genetics, DNA, Fungal genetics, DNA, Ribosomal genetics, DNA, Ribosomal Spacer genetics, Dipterocarpaceae microbiology, Fruiting Bodies, Fungal cytology, Mycological Typing Techniques, Peptide Elongation Factor 1 genetics, Species Specificity, Spores, Fungal cytology, Basidiomycota classification, Phylogeny
- Abstract
Two new species of Phylloporus from Bangladesh forests dominated by Shorea robusta are described and illustrated, based on morphological and molecular phylogenetic evidence. Phylloporus attenuatus is characterized by its wine-red to brownish-red pilei, decurrent lamellae that stain blue, downwards tapering stipe, a trichodermium pileipellis, and ellipsoidal-ovoid to ellipsoidal basidiospores (7-8 × 4-5 µm). Phylloporus catenulatus is characterized by its small-sized basidiomata with reddish-brown pilei, narrowly decurrent with distant lamellae that stain blue, a subepithelium pileipellis, and ellipsoidal to ellipsoidal-ovoid basidiospores (8-9.5 × 4-5 µm). Both new species of Phylloporus are distinctive from any known taxa based on phylogenetic analyses of partial sequences of the nuc rDNA internal transcribed spacer (ITS; including ITS1-ITS2 but not 5.8S) region, partial sequence of nuclear ribosomal large subunit (28S) domains D1 and D2, and translation elongation factor 1-α (TEF1α). Both species are compared with phenotypically similar taxa and illustrated with line drawings and photographs. A key to the species of Phylloporus known from Bangladesh is provided.
- Published
- 2017
- Full Text
- View/download PDF
44. Three new species of Phylloporia (Hymenochaetales) with dimitic hyphal systems from tropical China.
- Author
-
Chen Y, Zhu L, Xing J, and Cui B
- Subjects
- Basidiomycota cytology, Basidiomycota genetics, China, Cluster Analysis, DNA, Fungal chemistry, DNA, Fungal genetics, DNA, Ribosomal chemistry, DNA, Ribosomal genetics, DNA, Ribosomal Spacer chemistry, DNA, Ribosomal Spacer genetics, Hyphae cytology, Phylogeny, RNA, Ribosomal, 28S genetics, RNA, Ribosomal, 5.8S genetics, Sequence Analysis, DNA, Spores, Fungal cytology, Tropical Climate, Basidiomycota classification, Basidiomycota isolation & purification
- Abstract
Three new species of Phylloporia from tropical China are described in this study: P. manglietiae, P. pendula, and P. pseudopectinata. Phylloporia manglietiae is characterized by triquetrous to ungulate basidiomata, with 6-8 pores/mm, a monomitic to dimitic hyphal system, and broadly ellipsoidal basidiospores, 3-3.5 × 2-2.5 μm. Phylloporia pendula has small, imbricate, and pendent basidiomata, with 7-9 pores/mm, a dimitic hyphal system, and broadly ellipsoidal basidiospores, 3.5-4 × 2.5-3 μm. Phylloporia pseudopectinata differs from other species of Phylloporia by its applanate basidiomata, with 8-9 pores/mm, a dimitic hyphal system, and subglobose basidiospores, 3-3.5 × 2-3 μm. Phylogenetic analyses, based on sequences from the D1-D2 domains of the 28S gene and the internal transcribed spacer (ITS) region (ITS1-5.8S-ITS2 = ITS) of the nuc rDNA, support the classification of the three new species in Phylloporia.
- Published
- 2017
- Full Text
- View/download PDF
45. Fistulinella ruschii, sp. nov., and a new record of Fistulinella campinaranae var. scrobiculata for the Atlantic Forest, Brazil.
- Author
-
Magnago AC, Neves MA, and da Silveira RMB
- Subjects
- Basidiomycota cytology, Basidiomycota genetics, Brazil, Cluster Analysis, DNA, Fungal chemistry, DNA, Fungal genetics, DNA, Ribosomal chemistry, DNA, Ribosomal genetics, DNA, Ribosomal Spacer chemistry, DNA, Ribosomal Spacer genetics, Forests, Microscopy, Microscopy, Electron, Scanning, Photography, Phylogeny, RNA, Ribosomal, 28S genetics, RNA, Ribosomal, 5.8S genetics, Sequence Analysis, DNA, Spores, Fungal cytology, Basidiomycota classification, Basidiomycota isolation & purification
- Abstract
Fistulinella is a small genus of boletoid fungi in the subfamily Austroboletoideae in the order Boletales. In this paper, F. ruschii from the Atlantic Forest is proposed as new to science and F. campinaranae var. scrobiculata, known from the Brazilian Amazon forest, is recorded for the first time in the Atlantic Forest. Macro- and microscopic descriptions, molecular data (nuc rDNA ITS1-5.8S-ITS2 and nuc 28S rDNA), photographs of the basidiomata, and scanning electron microscopy images of basidiospores are provided for both species. Based on sampling of six taxa, New World Fistulinella is found to be a strongly supported monophyletic group, but the genus at large is nonmonophyletic.
- Published
- 2017
- Full Text
- View/download PDF
46. Phellinopsis lonicericola and P. tibetica spp. nov. (Hymenochaetales, Basidiomycota), from Tibet, with a key to worldwide species.
- Author
-
Zhou LW and Song J
- Subjects
- Basidiomycota cytology, Basidiomycota genetics, DNA, Fungal genetics, DNA, Ribosomal Spacer genetics, Hyphae, Mycological Typing Techniques, Sequence Analysis, DNA, Spores, Fungal, Tibet, Basidiomycota classification, Phylogeny
- Abstract
Phellinopsis (Hymenochaetaceae) was recently segregated from Phellinus. Phellinopsis differs from other genera segregated from Phellinus in a combination of hymenial setae, if present, mostly originating from tramal hyphae and hyaline basidiospores becoming pale yellowish with age. In this study, two new species of Phellinopsis, P. lonicericola and P. tibetica, from Tibet in southwestern China were described and illustrated. Morphological data and sequences of the nuc rDNA ITS1-5.8S-ITS2 region (internal transcribed spacer [ITS] barcode) support the recognition of these taxa as distinct. They are morphologically compared with other species of Phellinopsis. Notably, P. lonicericola was often found on Lonicera together with Sanghuangporus alpinus, which was originally described from the same locality. In addition, Phellinopsis helwingiae, known from a single collection from Sichuan Province in midwestern China, is reported from Tibet. Eight accepted species of Phellinopsis worldwide, each forming a terminal lineage, grouped together as a strongly supported clade distinct from the clade representing Phellinus. A key to the eight species of Phellinopsis is provided.
- Published
- 2017
- Full Text
- View/download PDF
47. Efficacy of propidium iodide and FUN-1 stains for assessing viability in basidiospores of Rhizopogon roseolus.
- Author
-
Fernández-Miranda E, Majada J, and Casares A
- Subjects
- Basidiomycota metabolism, Basidiomycota ultrastructure, Fluorescent Dyes metabolism, Intercalating Agents metabolism, Spores, Fungal cytology, Spores, Fungal growth & development, Spores, Fungal metabolism, Basidiomycota cytology, Benzothiazoles metabolism, Microbial Viability, Propidium metabolism, Quinolinium Compounds metabolism, Staining and Labeling methods
- Abstract
The use of spores in applications of ectomycorrhizal fungi requires information regarding spore viability and germination, especially in genera such as Rhizopogon with high rates of spore dormancy. The authors developed a protocol to assess spore viability of Rhizopogon roseolus using four vital stains to quantify spore viability and germination and to optimize storage procedures. They showed that propidium iodide is an excellent stain for quantifying nonviable spores. Observing red fluorescent intravacuolar structures following staining with 2-chloro-4-(2,3-dihydro-3-methyl-(benzo-1,3-thiazol-2-yl)-methylidene)-1-phenylquinolinium iodide (FUN-1) can help identify viable spores that are activated. At 6 mo and 1 y, the spores kept in a water suspension survived better than those left within intact, dry gasterocarps. Our work highlights the importance of temperature, nutrients, and vitamins for maturation and germination of spores of R. roseolus during 1 y of storage.
- Published
- 2017
- Full Text
- View/download PDF
48. Unique phylogenetic position of the African truffle-like fungus, Octaviania ivoryana (Boletaceae, Boletales), and the proposal of a new genus, Afrocastellanoa.
- Author
-
Orihara T and Smith ME
- Subjects
- Africa South of the Sahara, Basidiomycota cytology, Basidiomycota genetics, DNA, Fungal genetics, DNA, Ribosomal genetics, DNA, Ribosomal Spacer genetics, Genetic Variation, Mycological Typing Techniques, Mycorrhizae cytology, Mycorrhizae genetics, Peptide Elongation Factor 1 genetics, Sequence Analysis, DNA, Species Specificity, Spores, Fungal cytology, Basidiomycota classification, Phylogeny
- Abstract
The sequestrate (truffle-like) basidiomycete Octaviania ivoryana was originally described based on collections from Zimbabwe, Kenya, Guinea, and Senegal. This species has basidiomes that stain blue-green and basidiospores with crowded spines that are characteristic of the genus Octaviania. However, O. ivoryana is the only Octaviania species described from sub-Saharan Africa, and the phylogenetic relationship of the species to other species of Octaviania sensu stricto has not been previously investigated. We examined the phylogenetic position of the isotype and paratype specimens of O. ivoryana based on two nuc rDNA loci-ITS1-5.8S-ITS2 (internal transcribed spacer [ITS]) and partial 28S-and the translation elongation factor 1-α gene. The resultant phylogenies indicate that O. ivoryana does not belong to Octaviania s. s. but instead forms a clade with the epigeous bolete genus, Porphyrellus sensu stricto (i.e., P. porphyrosporus and allies). The internal transcribed spacer phylogeny also recovers a monophyletic clade that includes sequences from O. ivoryana basidiomes as well as sequences from ectomycorrhizal root tips of Uapaca, Anthonotha, and assorted ectomycorrhizal Fabaceae species, suggesting that there is likely additional undescribed diversity within the lineage. We accordingly propose a new genus, Afrocastellanoa M.E. Sm. & Orihara, to accommodate the species O. ivoryana. Afrocastellanoa is morphologically distinct from Octaviania in the combination of a solid gleba, multilayered peridium, and the lack of distinct hymenium within the gleba. Our data suggest that the genus Afrocastellanoa is a unique sequestrate lineage with one described species and several undescribed species, all of which likely form ectomycorrhizas with African trees.
- Published
- 2017
- Full Text
- View/download PDF
49. Global diversity and phylogeny of Onnia (Hymenochaetaceae) species on gymnosperms.
- Author
-
Ji XH, He SH, Chen JJ, Si J, Wu F, Zhou LW, Vlasák J, Tian XM, and Dai YC
- Subjects
- Basidiomycota cytology, Basidiomycota isolation & purification, Cluster Analysis, DNA, Fungal chemistry, DNA, Fungal genetics, DNA, Ribosomal chemistry, DNA, Ribosomal genetics, DNA, Ribosomal Spacer chemistry, DNA, Ribosomal Spacer genetics, Europe, Asia, Eastern, Microscopy, North America, Picea microbiology, Pinus microbiology, RNA, Ribosomal, 28S genetics, RNA, Ribosomal, 5.8S genetics, Sequence Analysis, DNA, Basidiomycota classification, Basidiomycota genetics, Genetic Variation, Phylogeography
- Abstract
Onnia includes white rotting polypores with annual basidiocarps, a duplex context, monomitic hyphal structure, hymenial setae, and hyaline, thin-walled, smooth basidiospores. Specimens of Onnia, originating mainly from East Asia, Europe, and North America, were studied using both morphology and phylogenetic analyses. Our concatenated data set was derived from 25 collections and included (i) 25 nuc rDNA internal transcribed spacer region sequences (ITS1-5.8S-ITS2 = ITS), 17 generated in this study; and (ii) 14 nuc rDNA 28S rDNA sequences, including the D1-D2 domains, 11 of them generated in this study. The resulting maximum likelihood and Bayesian phylogenies recovered all sampled collections of Onnia as a well-supported clade. In this clade, three previously accepted species, viz., Onnia leporina, O. tomentosa, and O. triquetra, received strong support, whereas three additional lineages with strong support represent the new species described in this paper, O. subtriquetra, O. microspora, and O. tibetica. Of the six Onnia species occurring on gymnosperms, O. tomentosa and O. leporina grow mainly on Picea and have circumboreal distribution in the Northern Hemisphere. In contrast, other species that mostly grow on Pinus are geographically restricted to limited regions, viz., O. triquetra in Europe, O. subtriquetra in North America, and O. microspora and O. tibetica in Asia.
- Published
- 2017
- Full Text
- View/download PDF
50. Polyozellus multiplex (Thelephorales) is a species complex containing four new species.
- Author
-
Voitk A, Saar I, Trudell S, Spirin V, Beug M, and Kõljalg U
- Subjects
- Asia, Basidiomycota cytology, Basidiomycota physiology, Cluster Analysis, DNA, Fungal chemistry, DNA, Fungal genetics, DNA, Plant chemistry, DNA, Plant genetics, DNA, Ribosomal Spacer chemistry, DNA, Ribosomal Spacer genetics, Fruiting Bodies, Fungal, North America, Pigments, Biological metabolism, Sequence Analysis, DNA, Spores, Fungal cytology, Basidiomycota classification, Basidiomycota genetics, Phylogeography
- Abstract
Geographic, morphological, and internal transcribed spacer (ITS)-based molecular review of collections identified as Polyozellus multiplex revealed that it is a complex of five phylogenetic species. Average spore size-either less or more than 7 × 6 µm-splits the complex into a small-spored group of two (P. multiplex and P. atrolazulinus) and a large-spored group of three (P. mariae, P. marymargaretae, and P. purpureoniger). Basidiocarps of the small-spored species are somewhat smaller than the large-spored ones, are various shades of blue, dark all the way to black, with brownish tomentum only in early growth, have dark context, and have pilei that tend to flare out at the edge. The large-spored species produce somewhat larger sporocarps, have light or lighter context than the pileipelis, and usually retain some brown on the mature pileipellis, the edge of which tends to curl like a cabbage leaf. All will darken or blacken with age. The species of the P. multiplex complex are distributed in the northern coniferous region, with the exception of Europe. One species (P. atrolazulinus) is known from three regions, eastern Asia, western North America, and northeastern North America. Two species are known from two regions: P. purpureoniger in eastern Asia and northwestern North America and P. multiplex in eastern Asia and eastern North America. Two species have been documented in one region only: P. mariae in northeastern North America and P. marymargaretae in western North America. A combination of location, macromorphology, and spore size will usually differentiate the species of the complex.
- Published
- 2017
- Full Text
- View/download PDF
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.