1. Application of CRISPR/Cas9 editing and digital droplet PCR in human iPSCs to generate novel knock-in reporter lines to visualize dopaminergic neurons
- Author
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Überbacher, C, Obergasteiger, J, Volta, M, Venezia, S, Müller, S, Pesce, I, Pizzi, S, Lamonaca, G, Picard, A, Cattelan, G, Malpeli, G, Zoli, M, Beccano-Kelly, D, Flynn, R, Wade-Martins, R, Pramstaller, P, Hicks, A, Cowley, S, and Corti, C
- Subjects
0301 basic medicine ,Cell type ,Population ,Green Fluorescent Proteins ,Induced Pluripotent Stem Cells ,Biology ,Polymerase Chain Reaction ,Article ,Flow cytometry ,Cell Line ,03 medical and health sciences ,0302 clinical medicine ,Gene knockin ,medicine ,CRISPR ,Humans ,Gene Knock-In Techniques ,Transgenes ,Induced pluripotent stem cell ,education ,CRISPR/Cas9 ,lcsh:QH301-705.5 ,Gene Editing ,education.field_of_study ,Tyrosine hydroxylase ,medicine.diagnostic_test ,Cas9 ,Dopaminergic Neurons ,Human induced pluripotent stem cells ,Cell Biology ,General Medicine ,Knock-in, Digital droplet PCR, Fluorescent reporter, FACS ,3. Good health ,Cell biology ,030104 developmental biology ,Microscopy, Fluorescence ,lcsh:Biology (General) ,Dopaminergic neurons ,CRISPR-Cas Systems ,030217 neurology & neurosurgery ,Developmental Biology - Abstract
Highlights • ddPCR is a highly sensitive and accurate screening tool for CRISPR/Cas9 engineering. • Dopaminergic differentiation results in faithful co-expression of TH and reporter. • Endogenous fluorescence detectable in dopaminergic neurons by flow cytometry., Human induced pluripotent stem cells (hiPSCs) have become indispensable for disease modelling. They are an important resource to access patient cells harbouring disease-causing mutations. Derivation of midbrain dopaminergic (DAergic) neurons from hiPSCs of PD patients represents the only option to model physiological processes in a cell type that is not otherwise accessible from human patients. However, differentiation does not produce a homogenous population of DA neurons and contaminant cell types may interfere with the readout of the in vitro system. Here, we use CRISPR/Cas9 to generate novel knock-in reporter lines for DA neurons, engineered with an endogenous fluorescent tyrosine hydroxylase – enhanced green fluorescent protein (TH-eGFP) reporter. We present a reproducible knock-in strategy combined with a highly specific homologous directed repair (HDR) screening approach using digital droplet PCR (ddPCR). The knock-in cell lines that we created show a functioning fluorescent reporter system for DA neurons that are identifiable by flow cytometry.
- Published
- 2019
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