116 results on '"Biological sensing and sensors"'
Search Results
2. Caged-Sphere Optofluidic Sensors: Whispering Gallery Resonators in Wicking Microfluidics.
- Author
-
Riesen, Nicolas, Peterkovic, Zane Q., Guan, Bin, François, Alexandre, Lancaster, David G., and Priest, Craig
- Subjects
- *
WHISPERING gallery modes , *RESONATORS , *LIQUID films , *MICROFLUIDIC devices , *ENVIRONMENTAL sampling , *MICROFLUIDICS - Abstract
The rapid development of optofluidic technologies in recent years has seen the need for sensing platforms with ease-of-use, simple sample manipulation, and high performance and sensitivity. Herein, an integrated optofluidic sensor consisting of a pillar array-based open microfluidic chip and caged dye-doped whispering gallery mode microspheres is demonstrated and shown to have potential for simple real-time monitoring of liquids. The open microfluidic chip allows for the wicking of a thin film of liquid across an open surface with subsequent evaporation-driven flow enabling continuous passive flow for sampling. The active dye-doped whispering gallery mode microspheres placed between pillars, avoid the use of cumbersome fibre tapers to couple light to the resonators as is required for passive microspheres. The performance of this integrated sensor is demonstrated using glucose solutions (0.05–0.3 g/mL) and the sensor response is shown to be dynamic and reversible. The sensor achieves a refractive index sensitivity of ~40 nm/RIU, with Q-factors of ~5 × 103 indicating a detection limit of ~3 × 10−3 RIU (~20 mg/mL glucose). Further enhancement of the detection limit is expected by increasing the microsphere Q-factor using high-index materials for the resonators, or alternatively, inducing lasing. The integrated sensors are expected to have significant potential for a host of downstream applications, particularly relating to point-of-care diagnostics. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
3. Slow light Mach-Zehnder interferometer as label-free biosensor with scalable sensitivity
- Author
-
Weiss, Sharon [Vanderbilt Univ., Nashville, TN (United States)]
- Published
- 2016
- Full Text
- View/download PDF
4. Spider Silk-Based Improved Multimode Interference Structure for Humidity Sensing.
- Author
-
Zhang, Yu, Zhang, Min, Li, Jiapeng, Zhang, Yaxun, Liu, Zhihai, Yang, Xinghua, Zhang, Jianzhong, Yang, Jun, and Yuan, Libo
- Abstract
We propose and demonstrate an improved multimode interference (MMI) structure based on a spider dragline silk (SDS) for relative humidity (RH) sensing. We configure the MMI structure by connecting a section of single-mode fiber, a section of no-core fiber (NCF), and a section of single-mode fiber sequentially, and then obtain the interference spectrum. We spirally wrap the dragline silk on the NCF to improve the MMI and help the interference dips to be significant and identifiable. The refractive index and diameter of the SDS will change due to the change of the RH around the SDS, which will cause the improved interference dips to shift. The experimental results indicate that the average sensitivity of the proposed SDS-based sensor is 1.15 nm/%RH in the range of 33%RH-98%RH and the maximum sensitivity is 2.02 nm/%RH in the range of 83% RH-98%RH. The larger the RH, the larger the sensitivity. The proposed sensor also performs good repeatability with a fluctuation of less than 2.6% and a response time of 558ms. Spider dragline silk has proven itself the right candidate for RH sensing application and promises a way to fabricate environmental-friendly, bio-absorbable and biocompatible protein-based devices for biochemical sensing that uses natural materials as their constituent. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
5. Synthesis of Electrical Conductive Silica Nanofiber/Gold Nanoparticle Composite by Laser Pulses and Sputtering Technique
- Author
-
Sarah Hamza, Anna Ignaszak, and Amirkianoosh Kiani
- Subjects
Nanomaterials ,Silicon ,Laser materials processing ,Biological sensing and sensors ,Materials and process characterization ,Nanostructure fabrication ,Materials of engineering and construction. Mechanics of materials ,TA401-492 - Abstract
Abstract Biocompatible-sensing materials hold an important role in biomedical applications where there is a need to translate biological responses into electrical signals. Increasing the biocompatibility of these sensing devices generally causes a reduction in the overall conductivity due to the processing techniques. Silicon is becoming a more feasible and available option for use in these applications due to its semiconductor properties and availability. When processed to be porous, it has shown promising biocompatibility; however, a reduction in its conductivity is caused by its oxidization. To overcome this, gold embedding through sputtering techniques are proposed in this research as a means of controlling and further imparting electrical properties to laser induced silicon oxide nanofibers. Single crystalline silicon wafers were laser processed using an Nd:YAG pulsed nanosecond laser system at different laser parameters before undergoing gold sputtering. Controlling the scanning parameters (e.g., smaller line spacings) was found to induce the formation of nanofibrous structures, whose diameters grew with increasing overlaps (number of laser beam scanning through the same path). At larger line spacings, nano and microparticle formation was observed. Overlap (OL) increases led to higher light absorbance’s by the wafers. The gold sputtered samples resulted in greater conductivities at higher gold concentrations, especially in samples with smaller fiber sizes. Overall, these findings show promising results for the future of silicon as a semiconductor and a biocompatible material for its use and development in the improvement of sensing applications.
- Published
- 2017
- Full Text
- View/download PDF
6. A General Description of the Performance of Surface Plasmon Sensors Using a Transmission Line Resonant Circuit Model.
- Author
-
Shen, Mengqi and Somekh, Michael G.
- Abstract
We analyze the response of surface plasmon (SP) sensors using a transmission line model. We illustrate this analysis with particular reference to a layered structure in which plasmon hybridization occurs. By applying the appropriate resonant condition to the system, we derive a circuit model which predicts the responsivity of different modes. This gives new physical insight into the sensing process. We discuss how the change in the sample region may be modeled as a change in the reactance in the equivalent circuit and from this, it follows that a single parameter can determine the change in resonance position with reactance. This approach is used to predict the response of a generic sensor to binding of an analyte and the bulk change of refractive index. This parameter arises naturally from the circuit representation in a way not readily accessible with the transfer matrix approach. The parameters can be expressed in terms of the ${Q}$ of a resonant circuit and confirms the intuition that a high ${Q}$ is associated with poor responsivity, however, we demonstrate that there is another circuit parameter, the resistance at resonance, that can mitigate this effect, providing a route for optimization of the sensor properties. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
7. Hollow Core Inhibited Coupling Fibers for Biological Optical Sensing.
- Author
-
Giovanardi, Fabio, Cucinotta, Annamaria, Rozzi, Andrea, Corradini, Roberto, Benabid, Fetah, Rosa, Lorenzo, and Vincetti, Luca
- Abstract
In this paper, we report how tube lattice hollow-core fibers can be successfully used to build sensors for molecule detection. The inner silica surface of the fiber is functionalized and coated with a probe layer, which permits to bond only with a particular molecule (the target). When the fiber is infiltrated with a solution containing the target, an additional layer is created on the silica surface, causing a redshift of the fiber transmission spectrum. The technique does not require any additional transducer component, such as Bragg gratings, amplifying techniques, such as nano-particles, nor coherent sources. It simply consists of the measurement of the transmission spectrum of a piece of fiber some tens of centimeters long. The principle is validated with experimental results showing the detection of the streptavidin protein. A solution containing streptavidin was flowed through the hollow core of the fiber coated with biotin. The measurement of the transmitted spectrum before and after the infiltration showed the presence of a few nanometer thick bio-layer. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
8. Reflection-Based Thin-Core Modal Interferometry Optical Fiber Functionalized With PAA-PBA/PVA for Glucose Detection Under Physiological pH.
- Author
-
Wang, Yan Ru, Tou, Zhi Qiang, Ravikumar, Raghunandhan, Lim, Yi Yin, Ding, Zhe Wen, Zhao, Chun Liu, So, Ping Lam, and Chan, Chi Chiu
- Abstract
A phenylboronic-acid-derivatized poly (acrylic acid) (PAA-PBA)/poly(vinyl alcohol) (PVA) functionalized thin-core fiber (TCF) optical sensor is proposed for glucose detection. The unique Michelson-type fiber interferometer sensor was fabricated by splicing a short segment of TCF with a single-mode fiber, where the tip of TCF was melted into a rounded shape. PAA-PBA was synthesized by grafting PBA onto the PAA chain using N-hydroxysuccinimide and 1-(3-dimethylaminopropyl)-3-ethylcarbodiimide hydrochloride as coupling reagent. Multilayer films of PAA-PBA and PVA were subsequently functionalized onto the fiber-optic Michelson interferometer structure through layer-by-layer assembly. Experiments showed that the PAA-PBA/PVA functionalized fiber-optic probe exhibits glucose-sensitive behavior under physiological pH. The proposed sensor offers benefits such as simple fabrication, compact size, and glucose selectivity and has potential applications, such as insulin release system, in a biodevice. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
9. Graphene–MoS[formula omitted]–metal hybrid structures for plasmonic biosensors.
- Author
-
Aksimsek, Sinan, Jussila, Henri, and Sun, Zhipei
- Subjects
- *
MOLYBDENUM sulfides , *GRAPHENE , *SURFACE plasmon resonance , *CRYSTAL structure , *BIOSENSORS , *FOOD safety - Abstract
Surface Plasmon Resonance (SPR) biosensors are widely used for real-time label-free detection in medical diagnostics, pharmaceutical researches and food safety. Although there is a growing interest in miniaturization of biosensors for self-detection and diagnostics at out of laboratory, the performance of conventional metal SPR sensors is still limited. In this paper, we propose graphene–MoS 2 – metal hybrid structures based plasmon sensors under the best minimum light intensity approach, which represents the performance analysis in case of the lowest reflected light strength. It is demonstrated that the metal thickness can be reduced from 55 nm to 32 nm and 37 nm meanwhile the performance of the background sensor can be improved by 87% and 13% with the 4 additional MoS 2 and graphene layers, respectively. We show that MoS 2 based SPR devices provide much better sensitivity performance than graphene based devices. Our results reveal the another promising property of MoS 2 : The sensitivity of SPR sensors can be greatly increased with a few number of MoS 2 within the angular SPR system while reducing the size of the device, especially for particular applications such as detecting a single molecule and biosensing at low biomolecule concentration. Furthermore, we show that the equivalent optical properties of multilayered nanostructures also depend on the layer thickness which is a novel knowledge for the next studies on 2D material based SPR plasmonic devices. [ABSTRACT FROM AUTHOR]
- Published
- 2018
- Full Text
- View/download PDF
10. Real-time biodetection using a smartphone-based dual-color surface plasmon resonance sensor.
- Author
-
Qiang Liu, Huizhen Yuan, Yun Liu, Jiabin Wang, Zhenguo Jing, and Wei Peng
- Subjects
- *
SURFACE plasmon resonance , *REFRACTIVE index , *IMMUNOGLOBULIN G , *OPTICAL fiber detectors , *LENSES - Abstract
We proposed a compact and cost-effective red-green dual-color fiber optic surface plasmon resonance (SPR) sensor based on the smartphone. Inherent color selectivity of phone cameras was utilized for realtime monitoring of red and green color channels simultaneously, which can reduce the chance of false detection and improve the sensitivity. Because there are no external prisms, complex optical lenses, or diffraction grating, simple optical configuration is realized. It has a linear response in a refractive index range of 1.326 to 1.351 (R2 = 0.991) with a resolution of 2.3 × 10-4 RIU. We apply it for immunoglobulin G (IgG) concentration measurement. Experimental results demonstrate that a linear SPR response was achieved for IgG concentrations varying from 0.02 to 0.30 mg/ml with good repeatability. It may find promising applications in the fields of public health and environment monitoring owing to its simple optics design and applicability in real-time, label-free biodetection. [ABSTRACT FROM AUTHOR]
- Published
- 2018
- Full Text
- View/download PDF
11. Large Area Nanohole Arrays for Sensing Fabricated by Interference Lithography
- Author
-
Chiara Valsecchi, Luis Enrique Gomez Armas, and Jacson Weber de Menezes
- Subjects
holography ,optics at surfaces ,surface plasmons ,subwavelength structures ,nanostructures ,biological sensing and sensors ,Chemical technology ,TP1-1185 - Abstract
Several fabrication techniques are recently used to produce a nanopattern for sensing, as focused ion beam milling (FIB), e-beam lithography (EBL), nanoimprinting, and soft lithography. Here, interference lithography is explored for the fabrication of large area nanohole arrays in metal films as an efficient, flexible, and scalable production method. The transmission spectra in air of the 1 cm2 substrate were evaluated to study the substrate behavior when hole-size, periodicity, and film thickness are varied, in order to elucidate the best sample for the most effective sensing performance. The efficiency of the nanohole array was tested for bulk sensing and compared with other platforms found in the literature. The sensitivity of ~1000 nm/RIU, achieved with an array periodicity in the visible range, exceeds near infrared (NIR) performances previously reported, and demonstrates that interference lithography is one of the best alternative to other expensive and time-consuming nanofabrication methods.
- Published
- 2019
- Full Text
- View/download PDF
12. Design Parameter Optimization of a Silicon-Based Grating Waveguide for Performance Improvement in Biochemical Sensor Application.
- Author
-
Yoo-Seung Hong, Chun-Hyung Cho, and Hyuk-Kee Sung
- Abstract
We performed numerical analysis and design parameter optimization of a silicon-based grating waveguide refractive index (RI) sensor. The performance of the grating waveguide RI sensor was determined by the full-width at half-maximum (FWHM) and the shift in the resonance wavelength in the transmission spectrum. The transmission extinction, a major figure-of-merit of an RI sensor that reflects both FWHM and resonance shift performance, could be significantly improved by the proper determination of three major grating waveguide parameters: duty ratio, grating period, and etching depth. We analyzed the transmission characteristics of the grating waveguide under various design parameter conditions using a finite-difference time domain method. We achieved a transmission extinction improvement of >26 dB under a given bioenvironmental target change by the proper choice of the design procedure and parameters. This design procedure and choice of appropriate parameters would enable the widespread application of silicon-based grating waveguide in high-performance RI biochemical sensor. [ABSTRACT FROM AUTHOR]
- Published
- 2018
- Full Text
- View/download PDF
13. Synthesis of Electrical Conductive Silica Nanofiber/Gold Nanoparticle Composite by Laser Pulses and Sputtering Technique.
- Author
-
Hamza, Sarah, Ignaszak, Anna, and Kiani, Amirkianoosh
- Subjects
NANOFIBERS ,NANOSTRUCTURED materials synthesis ,ELECTRIC conductivity ,SILICA nanoparticles ,SPUTTERING (Physics) ,GOLD nanoparticles ,COMPOSITE materials ,LASER pulses - Abstract
Biocompatible-sensing materials hold an important role in biomedical applications where there is a need to translate biological responses into electrical signals. Increasing the biocompatibility of these sensing devices generally causes a reduction in the overall conductivity due to the processing techniques. Silicon is becoming a more feasible and available option for use in these applications due to its semiconductor properties and availability. When processed to be porous, it has shown promising biocompatibility; however, a reduction in its conductivity is caused by its oxidization. To overcome this, gold embedding through sputtering techniques are proposed in this research as a means of controlling and further imparting electrical properties to laser induced silicon oxide nanofibers. Single crystalline silicon wafers were laser processed using an Nd:YAG pulsed nanosecond laser system at different laser parameters before undergoing gold sputtering. Controlling the scanning parameters (e.g., smaller line spacings) was found to induce the formation of nanofibrous structures, whose diameters grew with increasing overlaps (number of laser beam scanning through the same path). At larger line spacings, nano and microparticle formation was observed. Overlap (OL) increases led to higher light absorbance's by the wafers. The gold sputtered samples resulted in greater conductivities at higher gold concentrations, especially in samples with smaller fiber sizes. Overall, these findings show promising results for the future of silicon as a semiconductor and a biocompatible material for its use and development in the improvement of sensing applications. [ABSTRACT FROM AUTHOR]
- Published
- 2017
- Full Text
- View/download PDF
14. Disappearance of Plasmonically Induced Reflectance by Breaking Symmetry in Metamaterials.
- Author
-
Vafapour, Z. and Forouzeshfard, M.
- Subjects
- *
OPTICAL properties , *METAMATERIALS , *PLASMONICS , *BIOSENSORS , *SYMMETRY breaking , *REFLECTANCE spectroscopy - Abstract
Although, using cut-out I-II and H-II structures, it has been proved that symmetry broken is necessitous to have a plasmonically induced reflectance (PIR) but it is also possible to create PIR effect in a symmetric cut-out H-II structure. In this paper, in addition to reaffirming the possibility of creating PIR effect in symmetric structure using I-II structure, it is also proved, for both the I-II and H-II structures, that the created PIR effect in symmetric case can be vanished by breaking the symmetry. The created PIR effect in the two I-II and H-II structures will be compared in different situations. [ABSTRACT FROM AUTHOR]
- Published
- 2017
- Full Text
- View/download PDF
15. Optimization of Surface Plasmon Resonance Biosensor with Ag/Au Multilayer Structure and Fiber-Optic Miniaturization.
- Author
-
Lu, Mengdi, Liang, Yuzhang, Qian, Siyu, Li, Lixia, Jing, Zhenguo, Masson, Jean-Francois, and Peng, Wei
- Subjects
- *
SURFACE plasmon resonance , *REFRACTIVE index measurement , *OPTICAL fibers , *COST effectiveness , *OPTICAL fiber detectors - Abstract
In this paper, we report a novel wavelength interrogation-based surface plasmon resonance (SPR) system, in which a film of three Ag layers and three Au layers are alternately deposited on a Kretschmann configuration as sensing element. This multilayer film shows higher sensitivity for refractive index (RI) measurement by comparing with single Au layer structure, which is consistent with its theoretical calculation. A sensitivity range of 2056-5893 nm/RIU can be achieved, which is comparable to RI sensitivities of other wavelength-modulated SPR sensors. Compared with Ag film, this Ag/Au multilayer arrangement offers anti-oxidant protection. This SPR biosensor based on a cost-effective Ag/Au multilayer structure is applicable to the real-time detection of specific interactions and dissociation of low protein concentrations. To extend the application of this highly-sensitive metal film device, we integrated this concept on an optical fiber. The range of RI sensitivities with Ag/Au multilayer was 1847-3309 nm/RIU. This miniaturized Ag/Au multilayer-based fiber optic sensor has a broad application in chemical and biological sensing. [ABSTRACT FROM AUTHOR]
- Published
- 2017
- Full Text
- View/download PDF
16. On-line dynamic detection in the electrophoretic separation by tapered optical fiber interferometer.
- Author
-
Yang, Xinghua, Zhou, Meihua, Li, Song, Liu, Zhihai, Yang, Jun, Zhang, Yu, Yuan, Tingting, Qi, Xiuxiu, Li, Hanyang, and Yuan, Libo
- Subjects
- *
ELECTROPHORETIC deposition , *SEPARATION (Technology) , *OPTICAL interferometers , *MIXTURES , *ELECTROPHORESIS - Abstract
We demonstrate a tapered optical fiber interferometer integrated electrophoretic trace mixture separating and on-line detecting device. In this design, we first introduce tapered optical fiber interferometer into electrophoresis system to dynamically on-line monitor the separation of the proteins. The tapered optical fiber interferometer is embedded into the separating medium of the electrophoresis system. The mixture of the proteins with negative charge driven by electric field in the separation gel can be separated and contact with the embedded fiber taper. When the separated components pass through the taper, the refractive index (RI) of the gel around the taper was dynamically adjusted and the interference spectra will present a reversible shift. To visually display the on-line separation and detection process, two kinds of simple proteins of Bovine serum albumin (BSA) and Chicken egg albumin (CEA) labeled with fluorescence indicator are adopted as the analytes in the device. Results show that a trace amount of the proteins (5 μl) can be completely separated in the separation gel. Simultaneously, when each component contacts with the tapered region of the optical fiber, interference spectra immediately presents an obvious change because of the dynamic change of the refractive index of the transparent polymer gel. In addition, the complex fixing and developing steps in traditional electrophoresis analysis can be replaced by on-line detection through interference spectra. Then, simultaneous separating treatment and dynamic detection of the proteins are first realized in this experiment. Significantly, this fiber taper integrated separating and on-line detecting device can find great potentials in various analysis fields involves composite samples such as DNA separation and even the virus and cell research. [ABSTRACT FROM AUTHOR]
- Published
- 2017
- Full Text
- View/download PDF
17. Measurement of Fluorescence in a Rhodamine-123 Doped Self-Assembled 'Giant' Mesostructured Silica Sphere Using a Smartphone as Optical Hardware
- Author
-
Ingemar Petermann, Maxwell J. Crossley, Masood Naqshbandi, Angelica Lau, and John Canning
- Subjects
biological sensing and sensors ,optical diagnostics for medicine ,fluorescence ,optoelectronics ,light-emitting diodes ,fluorescence microscopy ,nanomaterials ,silica ,optical instruments ,smartphones ,mobile platforms ,Chemical technology ,TP1-1185 - Abstract
The blue OLED emission from a mobile phone was characterised, revealing a sharp emission band centred at λ = 445 nm with a 3dB bandwidth Δλ ~ 20 nm. It was used to excite Rhodamine 123 doped within a “giant” mesostructured silica sphere during fabrication through evaporative self-assembly of silica nanoparticles. Fluorescence was able to be detected using a standard optical microscope fitted with a green transmission pass filter and cooled CCD and with 1 ms exposure time demonstrating the potential of mobile platforms as the basis for portable diagnostics in the field.
- Published
- 2011
- Full Text
- View/download PDF
18. An Ultrasensitive and Multispectral Refractive Index Sensor Design Based on Quad-Supercell Metamaterials.
- Author
-
Xiao, Shuyuan, Wang, Tao, Liu, Yuebo, Han, Xu, and Yan, Xicheng
- Subjects
- *
PLASMONICS , *METAMATERIALS , *SURFACE plasmon resonance , *ASYMMETRY (Chemistry) , *POLARIZATION spectroscopy - Abstract
Plasmonic metamaterials support the localized surface plasmon resonance (LSPR), which is sensitive to the change in the dielectric environment and highly desirable for ultrasensitive biochemical sensing. In this work, a novel design of supercell metamaterials of four mutually rotating split ring resonators (SRRs) is proposed, where simultaneous excitations of odd ( N = 1 and N = 3) and even ( N = 2) resonance modes are realized due to additional asymmetry from the rotation and show insensitivity to two orthogonal polarizations. The full utilization of these three resonance dips show bright prospects for multispectral application. As a refractive index (RI) sensor, ultrahigh sensitivities ∼1000 nm/RIU for LC mode ( N = 1) and ∼500 nm/RIU for plasmon mode ( N = 2) are obtained in the near infrared (NIR) spectrum. [ABSTRACT FROM AUTHOR]
- Published
- 2017
- Full Text
- View/download PDF
19. Dual-channel fiber surface plasmon resonance biological sensor based on a hybrid interrogation of intensity and wavelength modulation.
- Author
-
Lixia Li, Xinpu Zhang, Yuzhang Liang, Jianye Guang, and Wei Peng
- Subjects
- *
BIOSENSORS , *SURFACE plasmons , *SURFACE plasmon resonance , *GOLD nanoparticles , *INDIUM tin oxide - Abstract
We investigate an intensity and wavelength modulation combined plasmon resonance-based fiberoptic sensor technology. Composed of gold nanoparticles (GNPs) and sandwich configuration of Au/indium tin oxide (ITO)/Au film, two sensing regions are fabricated separately along with unclad portions of the fiber-optic probe. It can simultaneously monitor both the light intensity from the Au NP channel and the wavelength from the Au/ITO/Au film channel with a single detector. As the refractive index (RI) of the external environment changes, the transmission intensity and resonance wavelength in the two channels are modified, which provides an interrogation of intensity and wavelength modulation. The sandwich film structure is formed using magnetron sputtering technology, and the GNPs functioning as localized surface plasmon resonators are coated on a multimode optical fiber via the layer-by-layer method. The experimental results reveal that the RI sensitivities of the two sensing channels are 334.1% RIU-1 and 1963.2 nm/RIU, respectively. Based on the above sensing design, we conduct real-time and label-free monitoring of IgG/anti-IgG and Con A/RNase B biomolecular interaction. The resonant dips excited by different sensing modes make it more attractive as a multichannel surface plasmon resonance analysis technology, which is valuable in biological and life sciences research and rapid diagnostics. [ABSTRACT FROM AUTHOR]
- Published
- 2016
- Full Text
- View/download PDF
20. Discrete dipole approximation simulation of bead enhanced diffraction grating biosensor.
- Author
-
Arif, Khalid Mahmood
- Subjects
- *
DIFFRACTION gratings , *BIOSENSORS , *LIGHT scattering , *DIPOLE moments , *APPROXIMATION theory - Abstract
We present the discrete dipole approximation simulation of light scattering from bead enhanced diffraction biosensor and report the effect of bead material, number of beads forming the grating and spatial randomness on the diffraction intensities of 1st and 0th orders. The dipole models of gratings are formed by volume slicing and image processing while the spatial locations of the beads on the substrate surface are randomly computed using discrete probability distribution. The effect of beads reduction on far-field scattering of 632.8 nm incident field, from fully occupied gratings to very coarse gratings, is studied for various bead materials. Our findings give insight into many difficult or experimentally impossible aspects of this genre of biosensors and establish that bead enhanced grating may be used for rapid and precise detection of small amounts of biomolecules. The results of simulations also show excellent qualitative similarities with experimental observations. [ABSTRACT FROM AUTHOR]
- Published
- 2016
- Full Text
- View/download PDF
21. Tunable Plasmonic Resonances in the Hexagonal Nanoarrays of Annular Aperture for Biosensing.
- Author
-
Liang, Yuzhang, Lu, Mengdi, Chu, Shuwen, Li, Lixia, and Peng, Wei
- Subjects
- *
BIOSENSORS , *MICROARRAY technology , *SURFACE plasmons , *RESONANT states , *SURFACE states , *SURFACE plasmon resonance , *PLASMONICS - Abstract
In this paper, we demonstrate a nanostructure sensor based on hexagonal arrays of annular aperture operating in the near-infrared wavelength range. The strong coupling interaction between propagating surface plasmons (PSP) mode and localized surface plasmons (LSP) mode in the designed structure generates two sharp spectral features under normal incidence. The mode coupling strongly enhances the electromagnetic fields and increases the interaction volume of the analyte and optical field. A high refractive index sensitivity of 623 nm/RIU is demonstrated in a wide refractive index range of 1.33 to 1.40. Due to the excitation of sharp spectral feature, as narrow as 7 nm, high figure of merits of 93 was obtained in the refractive index range, which is nearly 10 times larger than that from hole arrays and disk arrays. Furthermore, sharp spectral feature in the designed structure provides more error margin for structure parameters, which is advantageous for experimental realization of systems without requiring challenging fabrication resolution. The sensor is promising for biosensing applications with high sensitivity and low limit of detection. [ABSTRACT FROM AUTHOR]
- Published
- 2016
- Full Text
- View/download PDF
22. Efficient Simulation for Light Scattering from Plasmonic Core-Shell Nanospheres on a Substrate for Biosensing.
- Author
-
Xie, Huai-Yi, Chen, Minfeng, Chang, Yia-Chung, and Moirangthem, Rakesh
- Subjects
- *
METAL nanoparticles , *PLASMONICS , *LIGHT scattering , *SUBSTRATES (Materials science) , *BIOSENSORS , *GREEN'S functions , *SIMULATION methods & models - Abstract
We have developed an efficient numerical method to investigate light scattering from plasmonic nanospheres on a substrate covered by a shell, based on the half-space Green's function approach. We use this method to study optical scattering from DNA molecules attached to metallic nanoparticles on a substrate and compare with the experiment. We obtain fairly good agreement between theoretical predictions and the measured ellipsometric spectra. The metallic nanoparticles were used to detect the binding with DNA molecules in a microfluidic setup via spectroscopic ellipsometry (SE), and a detectable change in ellipsometric spectra was found when DNA molecules are captured on a Au nanoparticle surface. Our theoretical simulation indicates that the coverage of the Au nanosphere by a submonolayer of DNA molecules, which is modeled by a thin layer of dielectric material, can indeed lead to a small but detectable change in ellipsometric spectra. Our studies demonstrated the ultrasensitive capability of SE for sensing the submonolayer coverage of DNA molecules on Au nanospheres. [ABSTRACT FROM AUTHOR]
- Published
- 2015
- Full Text
- View/download PDF
23. Characterization of a Functional Hydrogel Layer on a Silicon-Based Grating Waveguide for a Biochemical Sensor
- Author
-
Yoo-Seung Hong, Jongseong Kim, and Hyuk-Kee Sung
- Subjects
waveguides ,diffraction gratings ,biological sensing and sensors ,optical sensing and sensors ,Chemical technology ,TP1-1185 - Abstract
We numerically demonstrated the characteristics of a functional hydrogel layer on a silicon-based grating waveguide for a simple, cost-effective refractive index (RI) biochemical sensor. The RI of the functional hydrogel layer changes when a specific biochemical interaction occurs between the hydrogel-linked receptors and injected ligand molecules. The transmission spectral profile of the grating waveguide shifts depends on the amount of RI change caused by the functional layer. Our characterization includes the effective RI change caused by the thickness, functional volume ratio, and functional strength of the hydrogel layer. The results confirm the feasibility of, and set design rules for, hydrogel-assisted silicon-based grating waveguides.
- Published
- 2016
- Full Text
- View/download PDF
24. Metallic Nanowire Array-Polymer Hybrid Film for Surface Plasmon Resonance Sensitivity Enhancement and Spectral Range Enlargement.
- Author
-
Peng, Wei, Liang, Yuzhang, Li, Lixia, and Masson, Jean-Francois
- Subjects
- *
POLYMER film analysis , *METALLIC films , *SURFACE plasmon resonance , *NANOSTRUCTURES , *BIOSENSORS - Abstract
In this paper, the coupling interaction is investigated between a metallic nanowire array and a metal film under the Kretschmann condition. The plasmonic multilayer is composed of a metallic nanowire array embedded in a polymer layer positioned above a metal film, exploiting the classical surface plasmon resonance (SPR) configuration. We analyze the influence of various structural parameters of the metallic nanowire array on the SPR spectrum of thin metal film. The results show that the coupling interactions of nanowires with the metal film can greatly affect SPR resonance wavelength and increase SPR sensitivity. The coupling strength of metallic nanowire array and metal film also impacts resonance wavelength, which can be used to adjust SPR range but have little effect on its sensitivity. The results are confirmed using a dipole coupling resonance model of metallic nanowire. We demonstrated that this nanostructured hybrid structure can be used for high sensitivity SPR monitoring in a large spectral range, which is important for advanced SPR measurement including fiber-optic SPR sensing technology. [ABSTRACT FROM AUTHOR]
- Published
- 2014
- Full Text
- View/download PDF
25. Performance of Refractive Index Sensors Based On Directional Couplers in Photonic Crystal Fibers.
- Author
-
Wu, Darran K. C., Lee, Kwang Jo, Pureur, Vincent, and Kuhlmey, Boris T.
- Abstract
We present a systematic analytic and numerical study of the detection limit of a refractive index sensor employing a directional coupler architecture within a photonic crystal fiber (PCF). The device is based on the coupling between the core mode and a copropagating mode of a satellite waveguide formed by a single hole of the PCF infiltrated by a high-index analyte. Using coupled mode theory as well as full simulations, we investigate the influence of changes in the geometrical parameters of the PCF and the analyte's refractive index on sensor performance, including sensitivity, resonance width, and detection limit. We show that regardless of the details of the sensor's implementation, the smallest detectable refractive index change is inversely proportional to the coupling length and the overlap integral of the satellite mode with the analyte, so that best performance comes at the cost of long analyte infiltration lengths. This is experimentally confirmed in our dip sensor configuration, where the lowest detection limit achievable for realistic implementation is estimated to 7 × 10 ^-8 refractive index units (RIU) based on realistic signal to noise ratios in a commercially available PCF. [ABSTRACT FROM PUBLISHER]
- Published
- 2013
- Full Text
- View/download PDF
26. Model and Analysis of a High Sensitivity Resonant Optical Read-Out Approach Suitable for Cantilever Sensor Arrays.
- Author
-
Putrino, Gino, Keating, A., Martyniuk, M., Faraone, L., and Dell, J.
- Abstract
We investigate an optically resonant cavity which is created between a reflecting micro-cantilever and a diffraction grating etched into a silicon waveguide. Changes in cavity resonance, induced by small deflections of the micro-cantilever result in large changes in an optical signal transmitted through the waveguide. An analytical model can predict the cantilever position for maximum and minimum transmission and is confirmed by three-dimensional finite difference time domain (FDTD) simulations. This approach can be used to accurately determine the position of a micro-cantilever with a predicted optimal shot noise limited deflection noise density of 4.1 fm/ Hz. [ABSTRACT FROM PUBLISHER]
- Published
- 2012
- Full Text
- View/download PDF
27. Graphene–MoS2–metal hybrid structures for plasmonic biosensors
- Subjects
ta114 ,Mathematical methods in optics ,Multilayers ,ta221 ,Biological sensing and sensors ,Surface plasmons ,ta216 ,Nanomaterials - Published
- 2018
28. Large Area Nanohole Arrays for Sensing Fabricated by Interference Lithography
- Author
-
J. W. Menezes, Chiara Valsecchi, and Luis Enrique Gomez Armas
- Subjects
Fabrication ,Materials science ,Holography ,optics at surfaces ,02 engineering and technology ,Substrate (electronics) ,010402 general chemistry ,lcsh:Chemical technology ,01 natural sciences ,Biochemistry ,Focused ion beam ,Article ,Soft lithography ,Analytical Chemistry ,Interference lithography ,law.invention ,biological sensing and sensors ,law ,nanostructures ,lcsh:TP1-1185 ,Electrical and Electronic Engineering ,Instrumentation ,Lithography ,business.industry ,surface plasmons ,021001 nanoscience & nanotechnology ,Atomic and Molecular Physics, and Optics ,0104 chemical sciences ,subwavelength structures ,Nanolithography ,Optoelectronics ,holography ,0210 nano-technology ,business - Abstract
Several fabrication techniques are recently used to produce a nanopattern for sensing, as focused ion beam milling (FIB), e-beam lithography (EBL), nanoimprinting, and soft lithography. Here, interference lithography is explored for the fabrication of large area nanohole arrays in metal films as an efficient, flexible, and scalable production method. The transmission spectra in air of the 1 cm2 substrate were evaluated to study the substrate behavior when hole-size, periodicity, and film thickness are varied, in order to elucidate the best sample for the most effective sensing performance. The efficiency of the nanohole array was tested for bulk sensing and compared with other platforms found in the literature. The sensitivity of ~1000 nm/RIU, achieved with an array periodicity in the visible range, exceeds near infrared (NIR) performances previously reported, and demonstrates that interference lithography is one of the best alternative to other expensive and time-consuming nanofabrication methods.
- Published
- 2019
29. Reflection-based thin-core modal interferometry optical fiber functionalized with PAA-PBA/PVA for glucose detection under physiological pH
- Author
-
Yan Ru Wang, Chi Chiu Chan, Zhe Wen Ding, Chun Liu Zhao, Yi Yin Lim, R.V.S.S.N. Ravikumar, Ping Lam So, Zhi Qiang Tou, School of Chemical and Biomedical Engineering, and School of Electrical and Electronic Engineering
- Subjects
Vinyl alcohol ,Materials science ,Optical fiber ,Chemical engineering [Engineering] ,Michelson interferometer ,Biological Sensing and Sensors ,02 engineering and technology ,biochemical phenomena, metabolism, and nutrition ,Atomic and Molecular Physics, and Optics ,Fiber Optics ,law.invention ,Core (optical fiber) ,chemistry.chemical_compound ,Interferometry ,020210 optoelectronics & photonics ,chemistry ,Chemical engineering ,Fiber optic sensor ,law ,parasitic diseases ,0202 electrical engineering, electronic engineering, information engineering ,Fiber ,Acrylic acid - Abstract
A phenylboronic-acid-derivatized poly (acrylic acid) (PAA-PBA)/poly(vinyl alcohol) (PVA) functionalized thin-core fiber (TCF) optical sensor is proposed for glucose detection. The unique Michelson-type fiber interferometer sensor was fabricated by splicing a short segment of TCF with a single-mode fiber, where the tip of TCF was melted into a rounded shape. PAA-PBA was synthesized by grafting PBA onto the PAA chain using N-hydroxysuccinimide and 1-(3-dimethylaminopropyl)-3-ethylcarbodiimide hydrochloride as coupling reagent. Multilayer films of PAA-PBA and PVA were subsequently functionalized onto the fiber-optic Michelson interferometer structure through layer-by-layer assembly. Experiments showed that the PAA-PBA/PVA functionalized fiber-optic probe exhibits glucose-sensitive behavior under physiological pH. The proposed sensor offers benefits such as simple fabrication, compact size, and glucose selectivity and has potential applications, such as insulin release system, in a biodevice. Accepted version
- Published
- 2019
30. Hollow Core Inhibited Coupling Fibers for Biological Optical Sensing
- Author
-
Roberto Corradini, Fetah Benabid, Fabio Giovanardi, Luca Vincetti, Andrea Rozzi, Lorenzo Rosa, and Annamaria Cucinotta
- Subjects
Streptavidin ,Physics::Optics ,02 engineering and technology ,Coupled mode theory ,chemistry.chemical_compound ,020210 optoelectronics & photonics ,0202 electrical engineering, electronic engineering, information engineering ,Molecule ,Silicon compounds ,Oscillators ,Propagation losses ,Biological sensing and sensors ,Biology ,Coupling ,Hollow core ,business.industry ,Sensors ,Fiber optics sensors ,Dispersion ,Atomic and Molecular Physics, and Optics ,Transducer ,chemistry ,Sensors, Couplings, Silicon compounds, Biology, Dispersion, Oscillators, Propagation losses, Fiber optics sensors, Biological sensing and sensors, Microstructured fibers ,Couplings ,Optoelectronics ,Nanometre ,Microstructured fibers ,business ,Refractive index - Abstract
In this paper, we report how tube lattice hollow-core fibers can be successfully used to build sensors for molecule detection. The inner silica surface of the fiber is functionalized and coated with a probe layer, which permits to bond only with a particular molecule (the target). When the fiber is infiltrated with a solution containing the target, an additional layer is created on the silica surface, causing a redshift of the fiber transmission spectrum. The technique does not require any additional transducer component, such as Bragg gratings, amplifying techniques, such as nano-particles, nor coherent sources. It simply consists of the measurement of the transmission spectrum of a piece of fiber some tens of centimeters long. The principle is validated with experimental results showing the detection of the streptavidin protein. A solution containing streptavidin was flowed through the hollow core of the fiber coated with biotin. The measurement of the transmitted spectrum before and after the infiltration showed the presence of a few nanometer thick bio-layer.
- Published
- 2019
31. Graphene–MoS2–metal hybrid structures for plasmonic biosensors
- Author
-
Aksimsek, Sinan, Jussila, Henri, Sun, Zhipei, Istanbul Kultur University, Department of Electronics and Nanoengineering, Aalto-yliopisto, and Aalto University
- Subjects
Mathematical methods in optics ,Multilayers ,Biological sensing and sensors ,Surface plasmons ,Nanomaterials - Abstract
Surface Plasmon Resonance (SPR) biosensors are widely used for real-time label-free detection in medical diagnostics, pharmaceutical researches and food safety. Although there is a growing interest in miniaturization of biosensors for self-detection and diagnostics at out of laboratory, the performance of conventional metal SPR sensors is still limited. In this paper, we propose graphene–MoS 2 – metal hybrid structures based plasmon sensors under the best minimum light intensity approach, which represents the performance analysis in case of the lowest reflected light strength. It is demonstrated that the metal thickness can be reduced from 55 nm to 32 nm and 37 nm meanwhile the performance of the background sensor can be improved by 87% and 13% with the 4 additional MoS2 and graphene layers, respectively. We show that MoS2 based SPR devices provide much better sensitivity performance than graphene based devices. Our results reveal the another promising property of MoS2: The sensitivity of SPR sensors can be greatly increased with a few number of MoS2 within the angular SPR system while reducing the size of the device, especially for particular applications such as detecting a single molecule and biosensing at low biomolecule concentration. Furthermore, we show that the equivalent optical properties of multilayered nanostructures also depend on the layer thickness which is a novel knowledge for the next studies on 2D material based SPR plasmonic devices.
- Published
- 2018
32. Characteristics of a refractometer based on Michelson interferometer integrated with a Fabry-Perot interferometer.
- Author
-
Al-Saeed, Tarek A. and Khalil, Diaa A.
- Subjects
- *
MICHELSON interferometer , *FABRY-Perot interferometers , *REFRACTOMETERS , *BIOSENSORS - Abstract
In this work we consider a refractometer based on a Michelson interferometer (MI) integrated with a Fabry-Perot interferometer (FPI). In one arm of the MI there is a moving mirror and in the second arm there is an FPI. As the mirror is scanned, we get the interferogram of the first harmonic and the peak position is extracted for the calculation the refractive index. Then we study the characteristics of this refractometer. We discuss different parameters of such a refractometer. We consider peak position and resolution as a function of refractive index, center wavelength, bandwidth and reflection coefficient of the plates of the FPI. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
33. High signal-to-noise ratio ultra-compact lab-on-a-chip microflow cytometer enabled by silicon optical antennas
- Author
-
Universitat Politècnica de València. Departamento de Comunicaciones - Departament de Comunicacions, Universitat Politècnica de València. Instituto Universitario de Tecnología Nanofotónica - Institut Universitari de Tecnologia Nanofotònica, Generalitat Valenciana, Agencia Estatal de Investigación, European Commission, Ministerio de Economía, Industria y Competitividad, Lechago-Buendia, Sergio, García Meca, Carlos, Sánchez Losilla, Nuria, Griol Barres, Amadeu, Martí Sendra, Javier, Universitat Politècnica de València. Departamento de Comunicaciones - Departament de Comunicacions, Universitat Politècnica de València. Instituto Universitario de Tecnología Nanofotónica - Institut Universitari de Tecnologia Nanofotònica, Generalitat Valenciana, Agencia Estatal de Investigación, European Commission, Ministerio de Economía, Industria y Competitividad, Lechago-Buendia, Sergio, García Meca, Carlos, Sánchez Losilla, Nuria, Griol Barres, Amadeu, and Martí Sendra, Javier
- Abstract
[EN] We experimentally demonstrate an all-silicon nanoantenna-based micro-optofluidic cytometer showing a combination of high signal-to-noise ratio (SNR) > 14 dB and ultra-compact size. Thanks to the ultra-high directivity of the antennas (>150), which enables a state-of-the-art sub-micron resolution, we are able to avoid the use of the bulky devices typically employed to collimate light on chip (such as lenses or fibers). The nm-scale antenna cross section allows a dramatic reduction of the optical system footprint, from the mm-scale of previous approaches to a few mu m(2), yielding a notable reduction in the fabrication costs. This scheme paves the way to ultra-compact lab-on-a-chip devices that may enable new applications with potential impact on all branches of biological and health science.
- Published
- 2018
34. Design Parameter Optimization of a Silicon-Based Grating Waveguide for Performance Improvement in Biochemical Sensor Application
- Author
-
Chun-Hyung Cho, Yoo-Seung Hong, and Hyuk-Kee Sung
- Subjects
Materials science ,Physics::Optics ,02 engineering and technology ,Grating ,lcsh:Chemical technology ,01 natural sciences ,Biochemistry ,Article ,Analytical Chemistry ,010309 optics ,biological sensing and sensors ,Optics ,Etching (microfabrication) ,0103 physical sciences ,Waveguide (acoustics) ,optical sensing and sensors ,lcsh:TP1-1185 ,Time domain ,Electrical and Electronic Engineering ,Instrumentation ,Diffraction grating ,business.industry ,refractive index sensor ,diffraction gratings ,021001 nanoscience & nanotechnology ,Atomic and Molecular Physics, and Optics ,Transmission (telecommunications) ,grating waveguide ,Duty cycle ,0210 nano-technology ,business ,Refractive index - Abstract
We performed numerical analysis and design parameter optimization of a silicon-based grating waveguide refractive index (RI) sensor. The performance of the grating waveguide RI sensor was determined by the full-width at half-maximum (FWHM) and the shift in the resonance wavelength in the transmission spectrum. The transmission extinction, a major figure-of-merit of an RI sensor that reflects both FWHM and resonance shift performance, could be significantly improved by the proper determination of three major grating waveguide parameters: duty ratio, grating period, and etching depth. We analyzed the transmission characteristics of the grating waveguide under various design parameter conditions using a finite-difference time domain method. We achieved a transmission extinction improvement of >26 dB under a given bioenvironmental target change by the proper choice of the design procedure and parameters. This design procedure and choice of appropriate parameters would enable the widespread application of silicon-based grating waveguide in high-performance RI biochemical sensor.
- Published
- 2018
35. A Fluorescence Sensor for Pb 2+ Detection Based on Liquid Crystals and Aggregation-Induced Emission Luminogens.
- Author
-
Du X, Liu Y, Wang F, Zhao D, Gleeson HF, and Luo D
- Subjects
- Biosensing Techniques methods, Fluorescence, Limit of Detection, Spectrometry, Fluorescence methods, Fluorescent Dyes chemistry, Lead analysis, Liquid Crystals chemistry
- Abstract
Heavy metals, such as lead ions, are regarded as the main environmental contaminants and have a negative impact on human bodies, making detection technologies of lead ions critical. However, most existing detection methods suffer from time consumption, complicated sample pretreatment, and expensive equipment, which hinder their broad use in real-time detection. Herein, we show a new fluorescence sensor for detecting lead ions derived from liquid crystals doped with an aggregation-induced emission luminogen. The mechanism is based on the variation of fluorescence intensity caused by the disturbance of an ordered liquid crystal configuration in the presence of Pb
2+ , induced by DNAzyme and its catalytic cleavage. The proposed fluorescence sensor exhibits a low detection limit of 0.65 nM, which is 2 orders of magnitude lower than that previously reported in an optical sensor based on liquid crystals. The detection range of the Pb2+ fluorescence sensor is broad, from 20 nM to 100 μM, and it also selects lead ions from numerous metal ions exactly, resulting in a highly sensitive, highly selective, simple, and low-cost detection strategy of Pb2+ with potential applications in chemical and biological fields. This approach to designing a liquid crystal fluorescence sensor offers an inspiring stage for detecting biomacromolecules or other heavy metal ions by varying decorated molecules.- Published
- 2021
- Full Text
- View/download PDF
36. Tunable Resonant Graphene Plasmons for Mid-infrared Biosensing
- Author
-
Tingting Wu, Lei Wei, and School of Electrical and Electronic Engineering
- Subjects
Nanostructure ,Materials science ,Surface Plasmons ,Mid infrared ,Physics::Optics ,Biological Sensing and Sensors ,Nanotechnology ,02 engineering and technology ,010402 general chemistry ,01 natural sciences ,law.invention ,symbols.namesake ,Optics ,law ,Electric field ,0103 physical sciences ,Physics::Atomic and Molecular Clusters ,Sensitivity (control systems) ,Physics::Chemical Physics ,010306 general physics ,Nanoscopic scale ,Plasmon ,chemistry.chemical_classification ,Quantitative Biology::Biomolecules ,Graphene ,business.industry ,Biomolecule ,Fermi level ,Surface plasmon ,021001 nanoscience & nanotechnology ,Atomic and Molecular Physics, and Optics ,0104 chemical sciences ,chemistry ,symbols ,Optoelectronics ,0210 nano-technology ,business ,Biosensor ,Refractive index - Abstract
Tunable resonant surface plasmons (SPs) based on graphene nanoribbon are studied to detect nanoscale protein molecules in mid-infrared (mid-IR) region. The two-dimensional nature of the collective oscillations of Dirac quasi-particles result in a strong electric field confinement of graphene plasmons, and lead to a large light overlap with the nanoscale biomolecules, which plays an essential role in the demonstrated high sensitivity in the detection of the refractive index of the nanometric-scale targeted protein molecule. Furthermore, Fermi level controlled resonant SPs in graphene nanostructure provide a unique capacity to control light in nanoscale to probe the protein chemical vibrations. Tunable resonant spectra selectivity combined with the super ambient condition sensitivity promise the graphene plasmons based device exciting prospects in future nanoscale biosensing. MOE (Min. of Education, S’pore)
- Published
- 2017
- Full Text
- View/download PDF
37. ICL-based TDLAS sensor for real-time breath gas analysis of carbon monoxide isotopes
- Author
-
Ramin Ghorbani and Florian M. Schmidt
- Subjects
Materials science ,Fysiologi ,Semiconductor lasers - quantum cascade ,Physiology ,Atom and Molecular Physics and Optics ,Medical Laboratory and Measurements Technologies ,Analytical chemistry ,Laser sensors ,Nanotechnology ,Interband cascade laser ,Mass spectrometry ,01 natural sciences ,Physical Chemistry ,law.invention ,Cavity ring-down spectroscopy ,010309 optics ,chemistry.chemical_compound ,Optics ,Spectroscopy - laser ,law ,0103 physical sciences ,Biological sensing and sensors ,Medicinsk laboratorie- och mätteknik ,Fysikalisk kemi ,Isotope ,business.industry ,010401 analytical chemistry ,Atomic and Molecular Physics, and Optics ,0104 chemical sciences ,Breath gas analysis ,chemistry ,Spectroscopy - infrared ,Modulation spectroscopy ,Atom- och molekylfysik och optik ,business ,Carbon monoxide - Abstract
We present a compact sensor for carbon monoxide (CO) in air and exhaled breath based on a room temperature interband cascade laser (ICL) operating at 4.69 µm, a low-volume circular multipass cell and wavelength modulation absorption spectroscopy. A fringe-limited (1σ) sensitivity of 6.5 × 10−8 cm−1Hz-1/2 and a detection limit of 9 ± 5 ppbv at 0.07 s acquisition time are achieved, which constitutes a 25-fold improvement compared to direct absorption spectroscopy. Integration over 10 s increases the precision to 0.6 ppbv. The setup also allows measuring the stable isotope 13CO in breath. We demonstrate quantification of indoor air CO and real-time detection of CO expirograms from healthy non-smokers and a healthy smoker before and after smoking. Isotope ratio analysis indicates depletion of 13CO in breath compared to natural abundance.
- Published
- 2017
38. Design rules for combined label-free and fluorescence Bloch surface wave biosensors
- Author
-
Peter Munzert, Riccardo Rizzo, Norbert Danz, Alberto Sinibaldi, Francesco Michelotti, Christoph Wächter, and Publica
- Subjects
Optics and Photonics ,Materials science ,Fabrication ,Physics::Optics ,Biosensing Techniques ,02 engineering and technology ,01 natural sciences ,Fluorescence ,010309 optics ,Photonic crystals ,Finesse ,Optics ,0103 physical sciences ,Optical sensing and sensors ,Biological sensing and sensors ,Biochip ,Photonic crystal ,Photons ,business.industry ,Resonance ,Surface waves ,021001 nanoscience & nanotechnology ,Atomic and Molecular Physics, and Optics ,Surface wave ,0210 nano-technology ,business ,Electromagnetic Phenomena ,Biosensor ,Excitation - Abstract
We report on the fabrication and physical characterization of optical biosensors implementing simultaneous label-free and fluorescence detection and taking advantage of the excitation of Bloch surface waves at a photonic crystal's truncation interface. Two types of purposely designed one-dimensional photonic crystals on molded organic substrates with micro-optics were fabricated. These crystals feature either high or low finesse of the Bloch surface wave resonances and were tested on the same optical readout system. The experimental results show that designing biochips with a large resonance quality factor does not necessarily lead in the real case to an improvement of the biosensor performance. The conditions for optimal biochip design and operation of the complete bio-sensing platform are established.
- Published
- 2017
39. Photonic Crystal Fiber as a Robust Raman Biosensor
- Author
-
Khetani, Altaf
- Subjects
biological sensing and sensors ,Raman scattering ,SERS ,cell analysis ,hollow core photonic crystal fiber ,Raman spectroscopy ,surface-enhanced ,biosensor ,optical sensor ,bandgap fiber ,PCF - Abstract
This thesis focuses on the investigation and development of an integrated optical biosensor based on enhanced Raman techniques that will provide label-free detection of biomolecules. This is achieved by using hollow core photonic crystal fibers (HC-PCF), nanoparticles, or both. HC-PCF is a unique type of optical fiber, with continuous ‘channels’ of air (typically) running the entire length. The channels serve to confine electromagnetic waves in the core of the fiber, and tailor its transmission properties. Using HC-PCF as a biosensor requires development of a robust technique to fill hollow-core photonic crystal fibers. Though several groups have reported selective filling of HC-PCF’s core, the processes are cumbersome and limit the choice of liquid to avoid multimode behavior. In my Master’s thesis, I presented a simple technique to non-selectively fill all the HC-PCF channels with samples. The non-selective filling preserves the photonic bandgap property of the fiber, and yields an extremely strong interaction of light and the sample that produces considerable enhancement of the Raman signal from the analyte. Up to now, non-selective filling was accomplished through capillary action and it delivered a Raman signal enhancement of approximately 30-fold, which is not sensitive enough to detect biomolecules at the clinical level. Moreover, there were issues of reliability and reproducibility, due to evaporation, filling and coupling light into the fiber. The objective of this PhD research was to overcome these problems by developing a robust optical fiber platform based on Raman spectroscopy that can be used in a clinical setting. I initially focused on heparin, an important blood anti-coagulant that requires precise monitoring and control in patients undergoing cardiac surgery or dialysis. Since the Raman spectra of heparin-serum mixtures exhibits Raman peaks of heparin with poor signal-to-noise ratios, I concentrated on enhancing the heparin Raman signal and filtering out the spectral background of the serum to improve detection sensitivity. Reaching maximum enhancement of the Raman signal required a strong interaction of light and analyte, which can be achieved by using hollow core photonic crystal fiber as I had used in my Master’s research. Using a small piece of HC-PCF I was able to reach an enhancement in the heparin Raman signal of greater than 90-fold. With this degree of enhancement, I was able to successfully detect and monitor heparin in serum at clinical levels, something that had never been accomplished previously. After developing HC-PCF as a Raman signal enhancer, I focused on making the HC-PCF sensor robust, reliable and reusable. This was achieved by integrating the HC-PCF with a differential pressure system that allowed effective filling, draining and refilling of the samples in an HC-PCF, under identical optical conditions. To demonstrate the device’s detection capabilities, various concentrations of aqueous ethanol and isopropanol, followed by different concentrations of heparin and adenosine in serum, were successfully monitored. To further improve the sensitivity of the HC-PCF based Raman sensor, I incorporated surface enhanced Raman scattering (SERS), by introducing nanoparticles into the HC-PCF fibers. The research focused on determining the optimal volume and size of silver nanoparticles to achieve maximum enhancement of the Raman signal in the HC-PCF. The HC-PCF enhanced the Raman signal of Rhodamine 6G (R6G) approximately 90-fold. In addition, the optimal size and volume of AgNP enhanced the Raman signal of R6G approximately 40-fold, leading to a total enhancement of approximately 4,000 in HC-PCF. This was then used to demonstrate the application of a SERS based HC-PCF sensing platform in monitoring adenosine (a clinically important molecule), as well as malignant cells such as leukemia. Finally, I used hollow core crystal fibers to significantly enhance the efficiency of two-photon photochemistry. Although two-photon photochemical reactions are difficult to achieve with a small volume, I accomplished it by using a novel platform of HC-PCF to efficiently execute the two-photon induced photodecarbonylation reaction of cyclopropenone 1, and its conversion to the corresponding acetylene. The simple optical design configuration involved coupling an 800-nm tsunami laser to a short piece of HC-PCF filled with the sample. This allowed me to increase the efficiency of two-photon induced photochemistry by 80-fold, compared to a conventional spectrophotometer cuvette. Thus, this work leads to the use of HC-PCFs to more effectively study two-photon induced photochemistry processes, which was limited due to the difficulty of detecting photochemical events with a small excitation volume.
- Published
- 2016
- Full Text
- View/download PDF
40. Application of Standoff LIF to Living and Inactivated Bacteria Samples
- Author
-
Walter, Arne, Duschek, Frank, Fellner, Lea, Grünewald, Karin, Tomaso, Herbert, Handke, Jürgen, Ambacher, Oliver, Quay, Rüdiger, and Wagner, Joachim
- Subjects
Institut für Technische Physik ,Hazardous material ,Bacteria ,Biological agent ,Biological sensing and sensors ,laser induced ,Standoff detection ,Fluorescence ,Spectroscopy - Abstract
To minimize the impact of an airborne bio-agent output, sensitive, specific and swift detection and identification are essential. A single method can hardly meet all of these requirements. Point sensors allow highly sensitive and specific identification but are localized and comparatively slow. Most laser-based standoff systems lack selectivity and specificity but provide real-time detection and classification in a wide region with additional information about location and propagation. A combination of both methods allows benefiting from their complementary assets and may be a promising solution to optimize detection and identification of hazardous substances. Here, we present progress for an outdoor bio-detector based on laser-induced fluorescence (LIF) developed at the DLR Lampoldshausen. After excitation at 280 and 355 nm, bacteria species express unique fluorescence spectra. Upon deactivation, the spectral features change depending on the applied method.
- Published
- 2016
41. Standoff detection: distinction of bacteria by hyperspectral laser induced fluorescence
- Author
-
Karin M. Grünewald, Carsten Pargmann, Jürgen Handke, Lea Fellner, Sandra Julich, Anita Hausmann, Herbert Tomaso, Frank Duschek, and Arne Walter
- Subjects
0301 basic medicine ,Materials science ,laser induced ,01 natural sciences ,Fluorescence ,law.invention ,010309 optics ,03 medical and health sciences ,law ,0103 physical sciences ,Biological agent ,Biological sensing and sensors ,Standoff detection ,Laser-induced fluorescence ,Spectroscopy ,Remote sensing ,Test facility ,Bacteria ,Atmosphärische Propagation und Wirkung ,Hyperspectral imaging ,Laser ,Fluorescence spectra ,Rapid identification ,Hazardous material ,Identification (information) ,030104 developmental biology ,Wide area - Abstract
Sensitive detection and rapid identification of hazardous bioorganic material with high sensitivity and specificity are essential topics for defense and security. A single method can hardly cover these requirements. While point sensors allow a highly specific identification, they only provide localized information and are comparatively slow. Laser based standoff systems allow almost real-time detection and classification of potentially hazardous material in a wide area and can provide information on how the aerosol may spread. The coupling of both methods may be a promising solution to optimize the acquisition and identification of hazardous substances. The capability of the outdoor LIF system at DLR Lampoldshausen test facility as an online classification tool has already been demonstrated. Here, we present promising data for further differentiation among bacteria. Bacteria species can express unique fluorescence spectra after excitation at 280 nm and 355 nm. Upon deactivation, the spectral features change depending on the deactivation method.
- Published
- 2016
- Full Text
- View/download PDF
42. ICL-based TDLAS sensor for real-time breath gas analysis of carbon monoxide isotopes
- Author
-
Ghorbani, Ramin, Schmidt, Florian M., Ghorbani, Ramin, and Schmidt, Florian M.
- Published
- 2017
- Full Text
- View/download PDF
43. Biological elements carry out optical tasks in coherent imaging systems
- Author
-
Valentina Marchesano, Pietro Ferraro, Francesco Merola, Lisa Miccio, Pasquale Memmolo, Melania Paturzo, and Vittorio Bianco
- Subjects
Image quality ,Computer science ,turbid media ,02 engineering and technology ,01 natural sciences ,Light scattering ,Scattering ,biological sensing and sensors ,010309 optics ,Optics ,0103 physical sciences ,Microscopy ,medical and biological imaging ,Decorrelation ,lens system design ,Microlens ,business.industry ,Digital Holography ,021001 nanoscience & nanotechnology ,Biophotonics ,Imaging through turbid media ,Optoelectronics ,0210 nano-technology ,business ,Digital holography ,Coherence (physics) - Abstract
We show how biological elements, like live bacteria species and Red Blood Cells (RBCs) can accomplish optical functionalities in DH systems. Turbid media allow coherent microscopy despite the strong light scattering these provoke, acting on light just as moving diffusers. Furthermore, a turbid medium can have positive effects on a coherent imaging system, providing resolution enhancement and mimicking the action of noise decorrelation devices, thus yielding an image quality significantly higher than the quality achievable through a transparent medium in similar recording conditions. Besides, suspended RBCs are demonstrated to behave as controllable liquid micro-lenses, opening new possibilities in biophotonics for endoscopy imaging purposes, as well as telemedicine for point-of-care diagnostics in developing countries and low-resource settings.
- Published
- 2016
- Full Text
- View/download PDF
44. Large Area Nanohole Arrays for Sensing Fabricated by Interference Lithography.
- Author
-
Valsecchi, Chiara, Gomez Armas, Luis Enrique, and Weber de Menezes, Jacson
- Subjects
ELECTRON beams ,LITHOGRAPHY ,NANOFABRICATION ,ION beams ,THICKNESS measurement - Abstract
Several fabrication techniques are recently used to produce a nanopattern for sensing, as focused ion beam milling (FIB), e-beam lithography (EBL), nanoimprinting, and soft lithography. Here, interference lithography is explored for the fabrication of large area nanohole arrays in metal films as an efficient, flexible, and scalable production method. The transmission spectra in air of the 1 cm
2 substrate were evaluated to study the substrate behavior when hole-size, periodicity, and film thickness are varied, in order to elucidate the best sample for the most effective sensing performance. The efficiency of the nanohole array was tested for bulk sensing and compared with other platforms found in the literature. The sensitivity of ~1000 nm/RIU, achieved with an array periodicity in the visible range, exceeds near infrared (NIR) performances previously reported, and demonstrates that interference lithography is one of the best alternative to other expensive and time-consuming nanofabrication methods. [ABSTRACT FROM AUTHOR]- Published
- 2019
- Full Text
- View/download PDF
45. A fast Hyperspectral Laser Induced Fluorescence application for standoff detection and online classification of biological hazardous materials
- Author
-
Duschek, Frank, Fischbach, Thomas, Hausmann, Anita, Pargmann, Carsten, Thieser, Jim, Julich, Sandra, Aleksejev, Valeri, Poryvkina, Larisa, Sobolev, Innokenti, Tomaso, Herbert, Babichenko, Sergej, and Handke, Jürgen
- Subjects
Hazardous material detection ,laser-induced ,ultraviolet ,Biological sensing and sensors ,Aerosol detection ,Standoff detection ,Fluorescence ,Spectroscopy - Published
- 2015
46. An Optical Biosensor Towards Urinary Tract Infection Diagnosis
- Author
-
Béland, Paul
- Subjects
Bacteria ,Surface plasmons ,Urology ,Plasmonics ,Integrated optics devices ,Medical optics and biotechnology ,Biological sensing and sensors ,Waveguides, planar - Abstract
We explore a new laboratory technique in the field of urinalysis promising a combination of speed and selectivity in support of urinary tract infection diagnosis. Laboratory experimentation demonstrates long range surface plasmon polaritons (LRSPP) waveguides as a useful biosensor to selectively detect gram negative bacteria or gram positive bacteria in human urine. The biosensor can detect bacteria at concentration of 105 CFU/ml, the internationally recommended threshold for diagnostic of urinary tract infection (UTI). Using a negative control solution at bacterial concentration 1000x higher than the targeted bacteria in urine with a weak concentration of constituents, the power ratio between the negative control signals to the target bacteria signal is measured to be 5.4. Thus we report a conclusive demonstration of the LRSPP waveguide biosensor selectivity to the gram of bacteria in human urine. In addition, the biosensor may prove useful as an alternative urinalysis test method to determine the urine specific gravity, to estimate proteinuria, and to detect biofilm formation on surfaces.
- Published
- 2015
- Full Text
- View/download PDF
47. Standoff detection and classifcation procedure for bioorganic compounds by hyperspectral laser-induced fluorescence
- Author
-
Jürgen Handke, Valeri Aleksejev, Frank Duschek, Carsten Pargmann, Anita Hausmann, Sergey Babichenko, Innokenti Sobolev, Thomas Fischbach, Larisa Poryvkina, and Fountain, Augustus W.
- Subjects
Signal processing ,Materials science ,business.industry ,Atmosphärische Propagation und Wirkung ,Hyperspectral imaging ,Laser ,Fluorescence ,law.invention ,Hazardous material detection ,Optics ,Transmission (telecommunications) ,law ,Hazardous waste ,laser-induced ,ultraviolet ,Sensitivity (control systems) ,False alarm ,Biological sensing and sensors ,Classification procedure ,Standoff detection ,business ,Laser-induced fluorescence ,Spectroscopy - Abstract
The high and still increasing number of attacks by hazardous bioorganic materials makes enormous demands on their detection. A very high detection sensitivity and differentiability are essential, as well as a rapid identification with low false alarm rates. One single technology can hardly achieve this. Point sensors can collect and identify materials, but finding an appropriate position is time consuming and involves several risks. Laser based standoff detection, however, can immediately provide information on propagation and compound type of a released hazardous material. The coupling of both methods may illustrate a solution to optimize the acquisition and detection of hazardous substances. At DLR Lampoldshausen, bioorganic substances are measured, based on laser induced fluorescence (LIF), and subsequently classified. In this work, a procedure is presented, which utilizes lots of information (time-dependent spectral data, local information) and predicts the presence of hazardous substances by statistical data analysis. For that purpose, studies are carried out on a free transmission range at a distance of 22m at two different excitation wavelengths alternating between 280nm and 355 nm. Time-dependent fluorescence spectra are recorded by a gated intensified CCD camera (iCCD). An automated signal processing allows fast and deterministic data collection and a direct subsequent classification of the detected substances. The variation of the substance parameters (physical state, concentration) is included within this method.
- Published
- 2015
48. New miniaturized exhaled nitric oxide sensor based on a high Q/V mid-infrared 1D photonic crystal cavity
- Author
-
Francesco Dell'Olio, Caterina Ciminelli, Mario Nicola Armenise, and Donato Conteduca
- Subjects
Materials science ,business.industry ,Resonance ,Chalcogenide glass ,Nanotechnology ,Integrated optics devices ,Atomic and Molecular Physics, and Optics ,Resonator ,Photonic crystals ,Optics ,Exhaled nitric oxide ,infrared ,Optoelectronics ,Resonators ,Transmission coefficient ,Optical sensing and sensors ,Spectroscopy, infrared ,Biological sensing and sensors ,Electrical and Electronic Engineering ,business ,Engineering (miscellaneous) ,Sensitivity (electronics) ,Order of magnitude ,Spectroscopy ,Photonic crystal - Abstract
A high Q/V mid-infrared 1D photonic crystal cavity in chalcogenide glass AMTIR-1 (Ge33As12Se55) resonating at λR=5.26 μm has been proposed as a key element of a sensor able to evaluate the nitric oxide (NO) concentration in the exhaled breath, namely fraction exhaled NO. The cavity design has been carried out through 3D finite-element method simulations. A Q-factor of 1.1×104 and a mode volume V=0.8 (λ/n)3, corresponding to a Q/V ratio of 1.4×104(λ/n)−3, have been obtained with a resonance transmission coefficient T=15%. A sensitivity of 10 ppb has been calculated with reference to the photothermal physical property of the material. Such a result is lower than the state-of-the-art of NO sensors proposed in literature, where hundreds of parts per trillion-level detection seem to have been achieved, but comparable with the performance obtained by commercial devices. The main advantages of the new device are in terms of footprint (=150 μm2), smaller at least 1 order of magnitude than those in literature, fast response time (only few seconds), and potential low cost. Such properties make possible in a handheld device the sensor integration in a multi-analysis system for detecting the presence of several trace gases, improving prevention, and reducing the duration of drug treatment for asthma and viral infections.
- Published
- 2015
49. Lifetime estimation on moving sub-cellular objects in frequency domain FLIM imaging
- Author
-
Roudot, Philippe, Kervrann, Charles, Blouin, Cedric, Waharte, Francois, Space-timE RePresentation, Imaging and cellular dynamics of molecular COmplexes (SERPICO), Inria Rennes – Bretagne Atlantique, Institut National de Recherche en Informatique et en Automatique (Inria)-Institut National de Recherche en Informatique et en Automatique (Inria), Compartimentation et dynamique cellulaires (CDC), Université Pierre et Marie Curie - Paris 6 (UPMC)-Institut Curie [Paris]-Centre National de la Recherche Scientifique (CNRS), French National Research Agency (ANR-10-INBS-04-07, 'Investmentsfor the future'), and Centre National de la Recherche Scientifique (CNRS)-Institut Curie [Paris]-Université Pierre et Marie Curie - Paris 6 (UPMC)
- Subjects
Fluorescence microscopy ,Lifetime-based sensing ,[PHYS.PHYS.PHYS-OPTICS]Physics [physics]/Physics [physics]/Optics [physics.optics] ,[INFO.INFO-TS]Computer Science [cs]/Signal and Image Processing ,[INFO.INFO-TI]Computer Science [cs]/Image Processing [eess.IV] ,[INFO.INFO-IM]Computer Science [cs]/Medical Imaging ,Biological sensing and sensors ,[PHYS.PHYS.PHYS-INS-DET]Physics [physics]/Physics [physics]/Instrumentation and Detectors [physics.ins-det] ,Motion estimation ,target tracking ,biological imaging - Abstract
International audience; Fluorescence lifetime is usually defined as the average nanosecond-scale delay between excitation and emission of fluorescence. It has been established that lifetime measurement yields numerous indications on cellular processes such as inter-protein and intra-protein mechanisms through fluorescent tagging and Förster resonance energy transfer (FRET). In this area, frequency domain fluorescence lifetime imaging microscopy (FD FLIM) is particularly well appropriate to probe a sample non-invasively and quantify these interactions in living cells. The aim is then to measure fluorescence lifetime in the sample at each location in space from fluorescence variations observed in a temporal sequence of images obtained by phase modulation of the detection signal. This leads to a sensitivity of lifetime determination to other sources of fluorescence variations such as intracellular motion. In this paper, we propose a robust statistical method for lifetime estimation on both background and small moving structures with a focus on intracellular vesicle trafficking.
- Published
- 2015
- Full Text
- View/download PDF
50. Sensitivity analysis for improving nanomechanical photonic transducers biosensors
- Author
-
Carlos Domínguez, Laura M. Lechuga, Mar Álvarez, David Fariña, S. Marquez, Ministerio de Economía y Competitividad (España), Centro de Investigación Biomédica en Red Bioingeniería, Biomateriales y Nanomedicina (España), Instituto de Salud Carlos III, European Commission, and Generalitat de Catalunya
- Subjects
Materials science ,Acoustics and Ultrasonics ,business.industry ,Single-mode optical fiber ,Integrated optics devices ,Condensed Matter Physics ,Signal ,Optomechanics ,Surfaces, Coatings and Films ,Electronic, Optical and Magnetic Materials ,Transducer ,Optoelectronics ,Biological sensing and sensors ,Photonics ,business ,Biosensor ,Sensitivity (electronics) ,Order of magnitude - Abstract
The achievement of high sensitivity and highly integrated transducers is one of the main challenges in the development of high-throughput biosensors. The aim of this study is to improve the final sensitivity of an opto-mechanical device to be used as a reliable biosensor. We report the analysis of the mechanical and optical properties of optical waveguide microcantilever transducers, and their dependency on device design and dimensions. The selected layout (geometry) based on two butt-coupled misaligned waveguides displays better sensitivities than an aligned one. With this configuration, we find that an optimal microcantilever thickness range between 150 nm and 400 nm would increase both microcantilever bending during the biorecognition process and increase optical sensitivity to 4.8 × 10−2 nm−1, an order of magnitude higher than other similar opto-mechanical devices. Moreover, the analysis shows that a single mode behaviour of the propagating radiation is required to avoid modal interference that could misinterpret the readout signal., The authors acknowledge the financial support of Generalitat de Catalunya (2014/SGR/624) and CIBER-BBN and ICN2. CIBER-BBN is an initiative funded by the VI National R&D&i Plan 2008–2011, Iniciativa Ingenio 2010, Consolider Program, CIBER Actions and financed by the Instituto de Salud Carlos III with assistance from the European Regional Development Fund. ICN2 is the recipient of Grant SEV-2013- 0295 from the ‘Severo Ochoa Centers of Excellence’ Program of Spanish MINECO.
- Published
- 2015
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.