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This paper is based on our previous work on neural coding. It is a self-organized model supported by existing evidences. Firstly, we briefly introduce this model in this paper, and then we explain the neural mechanism of language and reasoning with it. Moreover, we find that the position of an area determines its importance. Specifically, language relevant areas are in the capital position of the cortical kingdom. Therefore they are closely related with autonomous consciousness and working memories. In essence, language is a miniature of the real world. Briefly, this paper would like to bridge the gap between molecule mechanism of neurons and advanced functions such as language and reasoning.

Based on existing data, we wish to put forward a biological model of motor system on the neuron scale. Then we indicate its implications in statistics and learning. Specifically, neuron’s firing frequency and synaptic strength are probability estimates in essence. And the lateral inhibition also has statistical implications. From the standpoint of learning, dendritic competition through retrograde messengers is the foundation of conditional reflex and “grandmother cell” coding. And they are the kernel mechanisms of motor learning and sensory-motor integration respectively. Finally, we compare motor system with sensory system. In short, we would like to bridge the gap between molecule evidences and computational models.

The paper discusses the utilization of three-dimensional cellular automata employing the two-dimensional totalistic cellular automata to simulate how simple rules could emerge a highly complex architectural designs of some Indonesian heritages. A detailed discussion is brought to see the simple rules applied in Borobudur Temple, the largest ancient Buddhist temple in the country with very complex detailed designs within. The simulation confirms some previous findings related to measurement of the temple as well as some other ancient buildings in Indonesia. This happens to open further exploitation of the explanatory power presented by cellular automata for complex architectural designs built by civilization not having any supporting sophisticated tools, even standard measurement systems.

The self-similarity of Indonesian Borobudur Temple is observed through the dimensionality of stupa that is hypothetically closely related to whole architectural body. Fractal dimension is calculated by using the cube counting method and found that the dimension is 2.325, which is laid between the two-dimensional plane and three dimensional space. The applied fractal geometry and self-similarity of the building is emerged as the building process implement the metric rules, since there is no universal metric standard known in ancient traditional Javanese culture thus the architecture is not based on final master plan. The paper also proposes how the hypothetical algorithmic architecture might be applied computationally in order to see some experimental generations of similar building. The paper ends with some conjectures for further challenge and insights related to fractal geometry in Javanese traditional cultural heritages.