20 results on '"Bongiorni C"'
Search Results
2. Alterations of hemostasis after laparoscopic and open surgery
- Author
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Diamanti, T. Tsiminikakis, N. Skordylaki, A. Samiotaki, F. and Vernadakis, S. Bongiorni, C. Tsagarakis, N. Marikakis, F. Bramis, I. Bastounis, E.
- Abstract
Background: After tissue injury caused by trauma or surgery, alterations of hemostasis are observed and there is a risk for postoperative thromboembolic complications. Laparoscopic surgery, by causing limited tissue injury, appears to be associated with a lower risk for thromboembolism than open surgery. We conducted a prospective randomized study in order to detect potentially existing differences in activation of coagulation and fibrinolytic pathways between open and laparoscopic surgery. Methods: Forty patients suffering from chronic cholelithiasis were randomly assigned to undergo open (group A n = 20) or laparoscopic cholecystectomy (group B n = 20) by the same surgical and anesthesiology team. Demographic data were comparable. Blood samples were taken (a) preoperatively, (b) at the end of the procedure, (c).24 h postoperatively and (d) 72 h postoperatively. The following parameters were measured and compared within each group and between groups: platelets (PLT), soluble fibrin monomer complexes (SFMC), fibrin degradation products (FDP), D-dimers (D-D), fibrinogen (FIB), activated partial thromboplastin time (APTT), prothrombin time (PT). Thrombin-antithrombin III complexes (TAT) were measured at 24 and 72h postoperatively. Prothrombin fragment 1 + 2 (F1 + 2) was measured at 24 and 72h postoperatively in 11 patients of group A and 13 patients of group B, respectively. Results: Demographics were comparable between groups. Immediately postoperatively, TAT and F1 + 2 were significantly higher in group A as compared to group B (p < 0.05). They also increased significantly postoperatively as compared to preoperative levels within each group (p < 0.05). D-dimers were significantly higher in group A as compared to group B (p < 0.01) immediately postoperatively. D-dimers also increased significantly postoperatively in group B as compared to preoperative levels (p < 0.001). FIB decreased slightly in both groups at 24 h postoperatively but there was a significant increase in group A as compared to group B (p < 0.01). SFMC were detected twice in group A and only once group B. FDP levels over 5 mu g/ml were detected more often in group A than in group B (p < 0.05). No patient from either group suffered thromboembolism or abnormal bleeding as a postoperative complication. Conclusions: Open surgery as compared to laparoscopic procedures leads to activation of the clotting system of a higher degree. Although of a lower degree, hypercoagulability is still observed in patients undergoing laparoscopic surgery and, therefore, routine thromboembolic prophylaxis should be considered. more...
- Published
- 2007
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3. Structural Characterization of Spo0E-like Protein-aspartic Acid Phosphatases That Regulate Sporulation in Bacilli
- Author
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Grenha, R., Rzechorzek, N.J., Brannigan, J.A., de Jong, R.N., AB, E., Diercks, T., Truffault, V.P.M., Ladds, J.C., Fogg, M.J., Bongiorni, C., Perego, M., Kaptein, R., Wilson, K.S., Folkers, G.E., Wilkinson, A.J., NMR-spectroscopie, and Dep Scheikunde more...
- Subjects
fungi - Published
- 2006
4. Structural Characterization of Spo0E-like Protein-aspartic Acid Phosphatases That Regulate Sporulation in Bacilli
- Author
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NMR-spectroscopie, Dep Scheikunde, Grenha, R., Rzechorzek, N.J., Brannigan, J.A., de Jong, R.N., AB, E., Diercks, T., Truffault, V.P.M., Ladds, J.C., Fogg, M.J., Bongiorni, C., Perego, M., Kaptein, R., Wilson, K.S., Folkers, G.E., Wilkinson, A.J., NMR-spectroscopie, Dep Scheikunde, Grenha, R., Rzechorzek, N.J., Brannigan, J.A., de Jong, R.N., AB, E., Diercks, T., Truffault, V.P.M., Ladds, J.C., Fogg, M.J., Bongiorni, C., Perego, M., Kaptein, R., Wilson, K.S., Folkers, G.E., and Wilkinson, A.J. more...
- Published
- 2006
5. Alterations of hemostasis after laparoscopic and open surgery
- Author
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Diamantis, T., primary, Tsiminikakis, N., additional, Skordylaki, A., additional, Samiotaki, F., additional, Vernadakis, S., additional, Bongiorni, C., additional, Tsagarakis, N., additional, Marikakis, F., additional, Bramis, I., additional, and Bastounis, E., additional more...
- Published
- 2007
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- View/download PDF
6. Clitoromegaly due to an epidermal inclusion cyst: A case report.
- Author
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Fux-Otta C, Fuster M, Ramos N, Trezza C, Ñañez M, Fonseca I, Dicuatro N, Di Carlo M, Bongiorni C, Ochoa J, Rosato O, and Chedraui P
- Abstract
Background: Clitoromegaly is often a sign of androgen excess; however, non-hormonal causes must be ruled out. We report the case of an adolescent with isolated clitoromegaly without clinical or biochemical evidence of hyperandrogenism., Case: A 16-year-old female was referred due to a clitoromegaly of 12 months of evolution. Examination of the pubic region revealed normal female genitalia with an enlarged clitoris, 4 cm long and 2.5 cm wide. The clitoris was painless, soft on palpation, and mobile over deeper layers. There were no signs of virilization, and the patient did not report dysuria or difficulties with sexual intercourse. Her medical record was also unremarkable, with no female circumcision, family history of birth defects, or genital abnormalities. Hormone profile blood tests were normal. Pelvic ultrasound examination was normal, but a high-resolution scan with a linear transducer confirmed the presence of a cyst, lying anterior to the clitoral body and glans. The cyst was surgically removed with special care to preserve the clitoral neurovasculature. The pathological report disclosed an epidermoid clitoral cyst. The patient described emotional well-being, satisfactory sexual function, and no discomfort after a year of follow-up., Conclusion: Epidermal clitoral cysts represent an unusual cause of clitoromegaly. These cysts should be ruled out as a differential diagnosis after an exhaustive semiological and endocrinological examination., (© 2022 The Author(s).) more...
- Published
- 2022
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7. A procedure for removal of cyanuric acid in swimming pools using a cell-free thermostable cyanuric acid hydrolase.
- Author
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Guo F, McAuliffe JC, Bongiorni C, Latone JA, Pepsin MJ, Chow MS, Dhaliwal RS, Hoffmann KM, Brazil BT, Heng MH, Robinson SL, Wackett LP, and Whited GM
- Subjects
- Chlorine, Hydrolases genetics, Hydrolases metabolism, Hypochlorous Acid, Triazines, Biuret metabolism, Swimming Pools
- Abstract
Cyanuric acid (CYA) is used commercially for maintaining active chlorine to inactivate microbial and viral pathogens in swimming pools and hot tubs. Repeated CYA addition can cause a lack of available chlorine and adequate disinfection. Acceptable CYA levels can potentially be restored via cyanuric acid hydrolases (CAH), enzymes that hydrolyze CYA to biuret under mild conditions. Here we describe a previously unknown CAH enzyme from Pseudolabrys sp. Root1462 (CAH-PR), mined from public databases by bioinformatic analysis of potential CAH genes, which we show to be suitable in a cell-free form for industrial applications based upon favorable enzymatic and physical properties, combined with high-yield expression in aerobic cell culture. The kinetic parameters and modeled structure were similar to known CAH enzymes, but the new enzyme displayed a surprising thermal and storage stability. The new CAH enzyme was applied, following addition of inexpensive sodium sulfite, to hydrolyze CYA to biuret. At the desired endpoint, hypochlorite addition inactivated remaining enzyme and oxidized biuret to primarily dinitrogen and carbon dioxide gases. The mechanism of biuret oxidation with hypochlorite under conditions relevant to recreational pools is described., (© The Author(s) 2021. Published by Oxford University Press on behalf of Society of Industrial Microbiology and Biotechnology.) more...
- Published
- 2022
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8. Relative contributions of non-essential Sec pathway components and cell envelope-associated proteases to high-level enzyme secretion by Bacillus subtilis.
- Author
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Neef J, Bongiorni C, Schmidt B, Goosens VJ, and van Dijl JM
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- Adenosine Triphosphatases genetics, Adenosine Triphosphatases metabolism, Bacillus subtilis genetics, Bacterial Proteins genetics, Bacterial Proteins metabolism, Gene Expression Regulation, Bacterial, Membrane Transport Proteins genetics, Membrane Transport Proteins metabolism, Molecular Chaperones genetics, Molecular Chaperones metabolism, Peptide Hydrolases genetics, Protein Transport, SEC Translocation Channels genetics, SEC Translocation Channels metabolism, Serine Endopeptidases genetics, Serine Endopeptidases metabolism, alpha-Amylases genetics, Bacillus subtilis enzymology, Cell Membrane enzymology, Peptide Hydrolases biosynthesis, Secretory Pathway
- Abstract
Background: Bacillus subtilis is an important industrial workhorse applied in the production of many different commercially relevant proteins, especially enzymes. Virtually all of these proteins are secreted via the general secretion (Sec) pathway. Studies from different laboratories have demonstrated essential or non-essential contributions of various Sec machinery components to protein secretion in B. subtilis. However, a systematic comparison of the impact of each individual Sec machinery component under conditions of high-level protein secretion was so far missing., Results: In the present study, we have compared the contributions of non-essential Sec pathway components and cell envelope-associated proteases on the secretion efficiency of three proteins expressed at high level. This concerned the α-amylases AmyE from B. subtilis and AmyL from Bacillus licheniformis, and the serine protease BPN' from Bacillus amyloliquefaciens. We compared the secretion capacity of mutant strains in shake flask cultures, and the respective secretion kinetics by pulse-chase labeling experiments. The results show that secDF, secG or rasP mutations severely affect AmyE, AmyL and BPN' secretion, but the actual effect size depends on the investigated protein. Additionally, the chaperone DnaK is important for BPN' secretion, while AmyE or AmyL secretion are not affected by a dnaK deletion. Further, we assessed the induction of secretion stress responses in mutant strains by examining AmyE- and AmyL-dependent induction of the quality control proteases HtrA and HtrB. Interestingly, the deletion of certain sip genes revealed a strong differential impact of particular signal peptidases on the magnitude of the secretion stress response., Conclusions: The results of the present study highlight the importance of SecDF, SecG and RasP for protein secretion and reveal unexpected differences in the induction of the secretion stress response in different mutant strains. more...
- Published
- 2020
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9. Intramembrane protease RasP boosts protein production in Bacillus.
- Author
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Neef J, Bongiorni C, Goosens VJ, Schmidt B, and van Dijl JM
- Subjects
- Bacillus genetics, Bacillus metabolism, Bacillus amyloliquefaciens enzymology, Bacillus amyloliquefaciens genetics, Bacillus subtilis enzymology, Bacillus subtilis genetics, Bacterial Proteins metabolism, Gene Expression Regulation, Bacterial, Protein Sorting Signals genetics, Protein Transport genetics, alpha-Amylases genetics, Bacillus enzymology, Bacterial Proteins genetics, Cell Membrane enzymology, Peptide Hydrolases genetics, Peptide Hydrolases metabolism, Secretory Pathway genetics
- Abstract
Background: The microbial cell factory Bacillus subtilis is a popular industrial platform for high-level production of secreted technical enzymes. Nonetheless, the effective secretion of particular heterologous enzymes remains challenging. Over the past decades various studies have tackled this problem, and major improvements were achieved by optimizing signal peptides or removing proteases involved in product degradation. On the other hand, serious bottlenecks in the protein export process per se remained enigmatic, especially for protein secretion at commercially significant levels by cells grown to high density. The aim of our present study was to assess the relevance of the intramembrane protease RasP for high-level protein production in B. subtilis., Results: Deletion of the rasP gene resulted in reduced precursor processing and extracellular levels of the overproduced α-amylases AmyE from B. subtilis and AmyL from Bacillus licheniformis. Further, secretion of the overproduced serine protease BPN' from Bacillus amyloliquefaciens was severely impaired in the absence of RasP. Importantly, overexpression of rasP resulted in threefold increased production of a serine protease from Bacillus clausii, and 2.5- to 10-fold increased production of an AmyAc α-amylase from Paenibacillus curdlanolyticus, depending on the culture conditions. Of note, growth defects due to overproduction of the two latter enzymes were suppressed by rasP-overexpression., Conclusion: Here we show that an intramembrane protease, RasP, sets a limit to high-level production of two secreted heterologous enzymes that are difficult to produce in the B. subtilis cell factory. This finding was unexpected and suggests that proteolytic membrane sanitation is key to effective enzyme production in Bacillus. more...
- Published
- 2017
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10. Possible Rickettsia massiliae Infection in Greece: an Imported Case.
- Author
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Chochlakis D, Bongiorni C, Partalis N, Tselentis Y, and Psaroulaki A
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- Animals, Anti-Bacterial Agents therapeutic use, Cross Reactions, Greece, Humans, Male, Middle Aged, Rickettsia genetics, Rickettsia immunology, Rickettsia Infections drug therapy, Rickettsia Infections microbiology, Rickettsia Infections physiopathology, Travel, United Kingdom, Antibodies, Bacterial blood, DNA, Bacterial genetics, Rickettsia isolation & purification, Rickettsia Infections diagnosis, Ticks microbiology
- Abstract
Tick-borne rickettsioses are endemic in Greece; however, until recently, only Rickettsia typhi and R. conorii were tested routinely in human samples arriving at the National Reference Center. During the last few years, the identification of different rickettsia species in ticks led to the introduction of other spotted fever group rickettsiae in routine analysis. Under the new scheme, R. massiliae is now tested routinely in human samples; herein, we describe a human case of this infection. more...
- Published
- 2016
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11. Glucose-dependent activation of Bacillus anthracis toxin gene expression and virulence requires the carbon catabolite protein CcpA.
- Author
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Chiang C, Bongiorni C, and Perego M
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- Animals, Antigens, Bacterial genetics, Bacillus anthracis genetics, Bacillus anthracis pathogenicity, Bacterial Proteins genetics, Bacterial Toxins genetics, Female, Gene Expression Regulation, Bacterial physiology, Mice, Signal Transduction, Time Factors, Trans-Activators genetics, Trans-Activators metabolism, Virulence, Antigens, Bacterial metabolism, Bacillus anthracis drug effects, Bacillus anthracis metabolism, Bacterial Proteins metabolism, Bacterial Toxins metabolism, Gene Expression Regulation, Bacterial drug effects, Glucose pharmacology
- Abstract
Sensing environmental conditions is an essential aspect of bacterial physiology and virulence. In Bacillus anthracis, the causative agent of anthrax, transcription of the two major virulence factors, toxin and capsule, is triggered by bicarbonate, a major compound in the mammalian body. Here it is shown that glucose is an additional signaling molecule recognized by B. anthracis for toxin synthesis. The presence of glucose increased the expression of the protective antigen toxin component-encoding gene (pagA) by stimulating induction of transcription of the AtxA virulence transcription factor. Induction of atxA transcription by glucose required the carbon catabolite protein CcpA via an indirect mechanism. CcpA did not bind specifically to any region of the extended atxA promoter. The virulence of a B. anthracis strain from which the ccpA gene was deleted was significantly attenuated in a mouse model of infection. The data demonstrated that glucose is an important host environment-derived signaling molecule and that CcpA is a molecular link between environmental sensing and B. anthracis pathogenesis. more...
- Published
- 2011
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12. Fibrinolytic and coagulation pathways after laparoscopic and open surgery: a prospective randomized trial.
- Author
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Tsiminikakis N, Chouillard E, Tsigris C, Diamantis T, Bongiorni C, Ekonomou C, Antoniou C, and Bramis I
- Subjects
- Adult, Aged, Aged, 80 and over, Cholecystectomy, Laparoscopic, Cholelithiasis surgery, Chronic Disease, Female, Fibrinolysis physiology, Humans, Male, Middle Aged, Prospective Studies, Prothrombin Time, Blood Coagulation physiology, Blood Proteins metabolism, Cholecystectomy, Cholelithiasis blood
- Abstract
Background: Tissue injury poses increased risk for postoperative thromboembolic complications. Laparoscopic surgery, by causing limited tissue injury, is associated with lower risk for thromboembolism than is open surgery. We conducted a prospective randomized study in order to detect potentially existing differences in activation of coagulation and fibrinolytic pathways between open and laparoscopic surgery., Methods: Forty patients with chronic cholelithiasis were randomly assigned to undergo open (group A) or laparoscopic cholecystectomy (group B). Blood samples were taken preoperatively, at the end of the procedure, and at 24 and 72 h postoperatively. Prothrombin time (PT), activated partial thromboplastin time (APTT), international normalized ratio (INR), platelets (PLT), soluble fibrin monomer complexes (F.S. test), fibrin degradation products (FDP), D-dimers (D-D), and fibrinogen (FIB) were measured and compared within each group and between groups: Thrombin-antithrombin complexes (TAT) and prothrombin fragments (F1 + 2) were measured at 24 and 72 h postoperatively., Results: Demographics were comparable between groups. Immediately postoperatively, TAT and F1 + 2 were significantly higher in group A (p < 0.05). They also increased significantly postoperatively as compared with preoperative levels within each group (p < 0.05). D-dimers were significantly higher in group A (p < 0.01) immediately postoperatively. D-dimers also increased significantly postoperatively in group B as compared with preoperative levels (p < 0.001). FIB decreased slightly in both groups at 24 h postoperatively but there was a significant increase in group A (p < 0.01). Soluble fibrin monomer complexes (SFMC) were detected twice in group A and only once in group B. FDP levels over 5 μg/ml were detected more often in group A (p < 0.05). There was not any case of thromboembolism or abnormal bleeding., Conclusions: Open surgery leads to higher activation of the clotting system than do laparoscopic procedures. Although of a lower degree, hypercoagulability is still observed in patients undergoing laparoscopic surgery and therefore routine thromboembolic prophylaxis should be considered. more...
- Published
- 2009
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13. Dual promoters control expression of the Bacillus anthracis virulence factor AtxA.
- Author
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Bongiorni C, Fukushima T, Wilson AC, Chiang C, Mansilla MC, Hoch JA, and Perego M
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- Base Sequence, Blotting, Western, Gene Expression Regulation, Bacterial, Genes, Bacterial genetics, Models, Genetic, Molecular Sequence Data, Reverse Transcriptase Polymerase Chain Reaction, Transcription, Genetic, Bacillus anthracis genetics, Bacterial Proteins genetics, Promoter Regions, Genetic genetics, Trans-Activators genetics
- Abstract
The AtxA virulence regulator of Bacillus anthracis is required for toxin and capsule gene expression. AtxA is a phosphotransferase system regulatory domain-containing protein whose activity is regulated by phosphorylation/dephosphorylation of conserved histidine residues. Here we report that transcription of the atxA gene occurs from two independent promoters, P1 (previously described by Dai et al. [Z. Dai, J. C. Sirard, M. Mock, and T. M. Koehler, Mol. Microbiol. 16:1171-1181, 1995]) and P2, whose transcription start sites are separated by 650 bp. Both promoters have -10 and -35 consensus sequences compatible with recognition by sigma(A)-containing RNA polymerase, and neither promoter depends on the sporulation sigma factor SigH. The dual promoter activity and the extended untranslated mRNA suggest that as-yet-unknown regulatory mechanisms may act on this region to influence the level of AtxA in the cell. more...
- Published
- 2008
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14. Temporal separation of distinct differentiation pathways by a dual specificity Rap-Phr system in Bacillus subtilis.
- Author
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Smits WK, Bongiorni C, Veening JW, Hamoen LW, Kuipers OP, and Perego M
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- Bacillus subtilis growth & development, Bacillus subtilis physiology, Bacterial Proteins genetics, Microscopy, Fluorescence, Phosphoprotein Phosphatases genetics, Phosphoprotein Phosphatases metabolism, Spores, Bacterial physiology, Transcription Factors genetics, Transcription Factors metabolism, Bacillus subtilis cytology, Bacillus subtilis genetics, Bacterial Proteins metabolism, Cell Differentiation, Gene Expression Regulation, Bacterial
- Abstract
In bacterial differentiation, mechanisms have evolved to limit cells to a single developmental pathway. The establishment of genetic competence in Bacillus subtilis is controlled by a complex regulatory circuit that is highly interconnected with the developmental pathway for spore formation, and the two pathways appear to be mutually exclusive. Here we show by in vitro and in vivo analyses that a member of the Rap family of proteins, RapH, is activated directly by the late competence transcription factor ComK, and is capable of inhibiting both competence and sporulation. Importantly, RapH is the first member of the Rap family that demonstrates dual specificity, by dephosphorylating the Spo0F-P response regulator and inhibiting the DNA-binding activity of ComA. The protein thus acts at the stage where competence is well initiated, and prevents initiation of sporulation in competent cells as well as contributing to the escape from the competent state. A deletion of rapH induces both differentiation pathways and interferes with their temporal separation. Together, these results indicate that RapH is an integral part of a multifactorial regulatory circuit affecting the cell's decision between distinct developmental pathways. more...
- Published
- 2007
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15. Negative regulation of Bacillus anthracis sporulation by the Spo0E family of phosphatases.
- Author
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Bongiorni C, Stoessel R, and Perego M
- Subjects
- Amino Acid Sequence, Bacillus anthracis genetics, Bacillus anthracis growth & development, Bacterial Proteins genetics, Kinetics, Molecular Sequence Data, Phosphoric Monoester Hydrolases metabolism, Protein Biosynthesis, Recombinant Proteins metabolism, Sequence Deletion, Transcription, Genetic, Bacillus anthracis physiology, Bacterial Proteins metabolism, DNA-Binding Proteins metabolism, Spores, Bacterial physiology
- Abstract
The initiation of sporulation in Bacillus species is controlled by the phosphorelay signal transduction system. Multiple regulatory elements act on the phosphorelay to modulate the level of protein phosphorylation in response to cellular, environmental, and metabolic signals. In Bacillus anthracis nine possible histidine sensor kinases can positively activate the system, while two response regulator aspartyl phosphate phosphatases of the Rap family negatively impact the pathway by dephosphorylating the Spo0F intermediate response regulator. In this study, we have characterized the B. anthracis members of the Spo0E family of phosphatases that specifically dephosphorylate the Spo0A response regulator of the phosphorelay and master regulator of sporulation. The products of four genes were able to promote the dephosphorylation of Spo0A approximately P in vitro. The overexpression of two of these B. anthracis Spo0E-like proteins from a multicopy vector consistently resulted in a sporulation-deficient phenotype. A third gene was found to be not transcribed in vivo. A fourth gene encoded a prematurely truncated protein due to a base pair deletion that nevertheless was subject to translational frameshift repair in an Escherichia coli protein expression system. A fifth Spo0E-like protein has been structurally and functionally characterized as a phosphatase of Spo0A approximately P by R. N. Grenha et al. (J. Biol. Chem. 281:37993-38003, 2006). We propose that these proteins may contribute to maintain B. anthracis in the transition phase of growth during an active infection and therefore contribute to the virulence of this organism. more...
- Published
- 2007
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16. Opposing effects of histidine phosphorylation regulate the AtxA virulence transcription factor in Bacillus anthracis.
- Author
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Tsvetanova B, Wilson AC, Bongiorni C, Chiang C, Hoch JA, and Perego M
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- Amino Acid Sequence, Amino Acid Substitution, Bacillus anthracis genetics, Bacterial Toxins, Gene Expression Regulation, Bacterial, Histidine metabolism, Molecular Sequence Data, Phenotype, Phosphorylation, Protein Structure, Tertiary, Transcription, Genetic, Virulence genetics, Virulence Factors genetics, Bacillus anthracis metabolism, Bacillus anthracis pathogenicity, Bacterial Proteins metabolism, Protein Processing, Post-Translational, Trans-Activators metabolism
- Abstract
Expression of genes for Bacillus anthracis toxin and capsule virulence factors are dependent upon the AtxA transcription factor. The mechanism by which AtxA regulates the transcription of its target genes is unknown. Here we report that bioinformatic analyses suggested the presence in AtxA of two PTS (phosphenolpyruvate : sugar phosphotransferase system) regulation domains (PRD) generally regulated by phosphorylation/dephosphorylation at conserved histidine residues. By means of amino acid substitutions that mimic the phosphorylated (H to D) or the unphosphorylated (H to A) state of the protein, we showed that phosphorylation of H199 of PRD1 is likely to be necessary for AtxA activation while phosphorylation of H379 in PRD2 is inhibitory to toxin gene transcription. In vivo labelling experiments with radioactive phosphate allowed us to propose that H199 and H379 are AtxA residues subject to regulated phosphorylation. In support to these notions, we also show that deletion of ptsHI, encoding the HPr intermediate and the EI enzymes of PTS, or growth in the presence of glucose affect positively and negatively, respectively, the activity of AtxA. Our results link virulence factor production in B. anthracis to carbohydrate metabolism and, for the first time, provide a mechanistic explanation for AtxA transcriptional activity. more...
- Published
- 2007
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17. Structural characterization of Spo0E-like protein-aspartic acid phosphatases that regulate sporulation in bacilli.
- Author
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Grenha R, Rzechorzek NJ, Brannigan JA, de Jong RN, Ab E, Diercks T, Truffault V, Ladds JC, Fogg MJ, Bongiorni C, Perego M, Kaptein R, Wilson KS, Folkers GE, and Wilkinson AJ
- Subjects
- Amino Acid Motifs, Amino Acid Sequence, Bacillus anthracis genetics, Bacillus anthracis physiology, Bacterial Proteins genetics, Bacterial Proteins physiology, Base Sequence, DNA, Bacterial genetics, Dimerization, Genes, Bacterial, Models, Molecular, Molecular Sequence Data, Nuclear Magnetic Resonance, Biomolecular, Phosphoric Monoester Hydrolases genetics, Phosphoric Monoester Hydrolases physiology, Protein Structure, Quaternary, Protein Structure, Secondary, Recombinant Proteins chemistry, Recombinant Proteins genetics, Sequence Homology, Amino Acid, Spores, Bacterial enzymology, Spores, Bacterial genetics, Spores, Bacterial physiology, Bacillus anthracis enzymology, Bacterial Proteins chemistry, Phosphoric Monoester Hydrolases chemistry
- Abstract
Spore formation is an extreme response of many bacterial species to starvation. In the case of pathogenic species of Bacillus and Clostridium, it is also a component of disease transmission. Entry into the pathway of sporulation in Bacillus subtilis and its relatives is controlled by an expanded two-component system in which starvation signals lead to the activation of sensor kinases and phosphorylation of the master sporulation response regulator Spo0A. Accumulation of threshold concentrations of Spo0A approximately P heralds the commitment to sporulation. Countering the activities of the sensor kinases are phosphatases such as Spo0E, which dephosphorylate Spo0A approximately P and inhibit sporulation. Spo0E-like protein-aspartic acid-phosphate phosphatases, consisting of 50-90 residues, are conserved in sporeforming bacteria and unrelated in sequence to proteins of known structure. Here we determined the structures of the Spo0A approximately P phosphatases BA1655 and BA5174 from Bacillus anthracis using nuclear magnetic resonance spectroscopy. Each is composed of two anti-parallel alpha-helices flanked by flexible regions at the termini. The signature SQELD motif (SRDLD in BA1655) is situated in the middle of helix alpha2 with its polar residues projecting outward. BA5174 is a monomer, whereas BA1655 is a dimer. The four-helix bundle structure in the dimer is reminiscent of the phosphotransferase Spo0B and the chemotaxis phosphatase CheZ, although in contrast to these systems, the subunits in BA1655 are in head-to-tail rather than head-to-head apposition. The implications of the structures for interactions between the phosphatases and their substrate Spo0A approximately P are discussed. more...
- Published
- 2006
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18. Rap phosphatase of virulence plasmid pXO1 inhibits Bacillus anthracis sporulation.
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Bongiorni C, Stoessel R, Shoemaker D, and Perego M
- Subjects
- Amino Acid Sequence, Bacillus anthracis chemistry, Bacillus anthracis pathogenicity, Bacterial Proteins genetics, Deoxyribodipyrimidine Photo-Lyase genetics, Gene Expression Regulation, Bacterial, Genes, Bacterial, Molecular Sequence Data, Sequence Alignment, Spores, Bacterial, Virulence, Bacillus anthracis physiology, Bacterial Proteins metabolism, Deoxyribodipyrimidine Photo-Lyase metabolism, Down-Regulation, Plasmids chemistry
- Abstract
This study shows that the Bacillus anthracis pXO1 virulence plasmid carries a Rap-Phr system, BXA0205, which regulates sporulation initiation in this organism. The BXA0205Rap protein was shown to dephosphorylate the Spo0F response regulator intermediate of the phosphorelay signal transduction system that regulates the initiation of the developmental pathway in response to environmental, metabolic, and cell cycle signals. The activity of the Rap protein was shown to be inhibited by the carboxy-terminal pentapeptide generated through an export-import processing pathway from the associated BXA0205Phr protein. Deregulation of the Rap activity by either overexpression or lack of the Phr pentapeptide resulted in severe inhibition of sporulation. Five additional Rap-Phr encoding systems were identified on the chromosome of B. anthracis, one of which, BA3790-3791, also affected sporulation initiation. The results suggest that the plasmid-borne Rap-Phr system may provide a selective advantage to the virulence of B. anthracis. more...
- Published
- 2006
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- View/download PDF
19. Low-molecular-weight protein tyrosine phosphatases of Bacillus subtilis.
- Author
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Musumeci L, Bongiorni C, Tautz L, Edwards RA, Osterman A, Perego M, Mustelin T, and Bottini N
- Subjects
- Amino Acid Sequence, Bacillus subtilis genetics, Base Sequence, Cations, Divalent pharmacology, Computational Biology, Conserved Sequence, DNA Primers, Escherichia coli enzymology, Escherichia coli genetics, Humans, Kinetics, Molecular Sequence Data, Molecular Weight, Protein Tyrosine Phosphatases chemistry, Protein Tyrosine Phosphatases genetics, Restriction Mapping, Reverse Transcriptase Polymerase Chain Reaction, Sequence Alignment, Sequence Homology, Amino Acid, Transformation, Bacterial, Bacillus subtilis enzymology, Protein Tyrosine Phosphatases metabolism
- Abstract
In gram-negative organisms, enzymes belonging to the low-molecular-weight protein tyrosine phosphatase (LMPTP) family are involved in the regulation of important physiological functions, including stress resistance and synthesis of the polysaccharide capsule. LMPTPs have been identified also in gram-positive bacteria, but their functions in these organisms are presently unknown. We cloned two putative LMPTPs from Bacillus subtilis, YfkJ and YwlE, which are highly similar to each other in primary structure as well as to LMPTPs from gram-negative bacteria. When purified from overexpressing Escherichia coli strains, both enzymes were able to dephosphorylate p-nitrophenyl-phosphate and phosphotyrosine-containing substrates in vitro but showed significant differences in kinetic parameters and sensitivity to inhibitors. Transcriptional analyses showed that yfkJ was transcribed at a low level throughout the growth cycle and underwent a sigma(B)-dependent transcriptional upregulation in response to ethanol stress. The transcription of ywlE was growth dependent but stress insensitive. Genomic deletion of each phosphatase-encoding gene led to a phenotype of reduced bacterial resistance to ethanol stress, which was more marked in the ywlE deletion strain. Our study suggests that YfkJ and YwlE play roles in B. subtilis stress resistance. more...
- Published
- 2005
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20. Synergistic regulation of competence development in Bacillus subtilis by two Rap-Phr systems.
- Author
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Bongiorni C, Ishikawa S, Stephenson S, Ogasawara N, and Perego M
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- Amino Acid Sequence, Bacterial Proteins genetics, DNA-Binding Proteins genetics, DNA-Binding Proteins metabolism, Esterases genetics, Membrane Proteins genetics, Molecular Sequence Data, Repressor Proteins genetics, Sequence Alignment, Bacillus subtilis genetics, Bacterial Proteins metabolism, Deoxyribodipyrimidine Photo-Lyase genetics, Gene Expression Regulation, Bacterial, Membrane Proteins metabolism, Transformation, Bacterial genetics
- Abstract
The 11 Rap proteins of Bacillus subtilis comprise a conserved family of tetratricopeptide (TPR)-containing regulatory proteins. Their activity is inhibited by specific Phr pentapeptides produced from the product of phr genes through an export-import maturation process. We found that one of the proteins, namely RapF, is involved in the regulation of competence to DNA transformation. The ComA response regulator and transcription factor for initiation of competence development is the target of RapF. Specific binding of RapF to the carboxy-terminal DNA-binding domain of ComA inhibits the response regulator's ability to bind its target DNA promoters. The PhrF C-terminal pentapeptide, QRGMI, inhibits RapF activity. The activity of RapF and PhrF in regulating competence development is analogous to the previously described activity of RapC and PhrC (L. J. Core and M. Perego, Mol. Microbiol. 49:1509-1522, 2003). In fact, the RapF and PhrF pair of proteins acts synergistically with RapC and PhrC in the overall regulation of the ComA transcription factor. Since the transcription of the RapC- and RapF-encoding genes is positively regulated by their own target ComA, an autoregulatory circuit must exist for the competence transcription factor in order to modulate its activity. more...
- Published
- 2005
- Full Text
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