101 results on '"Bram F Coolen"'
Search Results
2. Ultra-high resolution, 3-dimensional magnetic resonance imaging of the atherosclerotic vessel wall at clinical 7T.
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Martin J Willemink, Bram F Coolen, Hadrien Dyvorne, Philip M Robson, Ilda Bander, Seigo Ishino, Alison Pruzan, Arthi Sridhar, Bei Zhang, Priti Balchandani, Venkatesh Mani, Gustav J Strijkers, Aart J Nederveen, Tim Leiner, Zahi A Fayad, Willem J M Mulder, and Claudia Calcagno
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Medicine ,Science - Abstract
Accurate quantification and characterization of atherosclerotic plaques with MRI requires high spatial resolution acquisitions with excellent image quality. The intrinsically better signal-to-noise ratio (SNR) at high-field clinical 7T compared to the widely employed lower field strengths of 1.5 and 3T may yield significant improvements to vascular MRI. However, 7T atherosclerosis imaging also presents specific challenges, related to local transmit coils and B1 field inhomogeneities, which may overshadow these theoretical gains. We present the development and evaluation of 3D, black-blood, ultra-high resolution vascular MRI on clinical high-field 7T in comparison lower-field 3T. These protocols were applied for in vivo imaging of atherosclerotic rabbits, which are often used for development, testing, and validation of translatable cardiovascular MR protocols. Eight atherosclerotic New Zealand White rabbits were imaged on clinical 7T and 3T MRI scanners using 3D, isotropic, high (0.63 mm3) and ultra-high (0.43 mm3) spatial resolution, black-blood MR sequences with extensive spatial coverage. Following imaging, rabbits were sacrificed for validation using fluorescence imaging and histology. Image quality parameters such as SNR and contrast-to-noise ratio (CNR), as well as morphological and functional plaque measurements (plaque area and permeability) were evaluated at both field strengths. Using the same or comparable imaging parameters, SNR and CNR were in general higher at 7T compared to 3T, with a median (interquartiles) SNR gain of +40.3 (35.3-80.1)%, and a median CNR gain of +68.1 (38.5-95.2)%. Morphological and functional parameters, such as vessel wall area and permeability, were reliably acquired at 7T and correlated significantly with corresponding, widely validated 3T vessel wall MRI measurements. In conclusion, we successfully developed 3D, black-blood, ultra-high spatial resolution vessel wall MRI protocols on a 7T clinical scanner. 7T imaging was in general superior to 3T with respect to image quality, and comparable in terms of plaque area and permeability measurements.
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- 2020
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3. Comparison of four MR carotid surface coils at 3T.
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Qinwei Zhang, Bram F Coolen, Sandra van den Berg, Gyula Kotek, Debra S Rivera, Dennis W J Klomp, Gustav J Strijkers, and Aart J Nederveen
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Medicine ,Science - Abstract
BACKGROUND:The quality of carotid wall MRI can benefit substantially from a dedicated RF coil that is tailored towards the human neck geometry and optimized for image signal-to-noise ratio (SNR), parallel imaging performance and RF penetration depth and coverage. In last decades, several of such dedicated carotid coils were introduced. However, a comparison of the more successful designs is still lacking. OBJECTIVE:To perform a head-to-head comparison over four dedicated MR carotid surface coils with 4, 6, 8 and 30 coil elements, respectively. MATERIAL AND METHODS:Ten volunteers were scanned on a 3T scanner. For each subject, multiple black-blood carotid vessel wall images were measured using the four coils with different parallel imaging settings. The performance of the coils was evaluated and compared in terms of image coverage, penetration depth and noise correlations between elements. Vessel wall of a common carotid section was delineated manually. Subsequently, images were assessed based on vessel wall morphology and image quality parameters. The morphological parameters consisted of the vessel wall area, thickness, and normalized wall index (wall area/total vessel area). Image quality parameters consisted of vessel wall SNR, wall-lumen contrast-to-noise ratio (CNR), the vessel g-factor, and CNRindex ((wall-lumen signal) / (wall+lumen signal)). Repeated measures analysis of variance (rmANOVA) was applied for each parameter for the averaged 10 slices for all volunteers to assess effect of coil and SENSE factor. If the rmANOVA was significant, post-hoc comparisons were conducted. RESULTS:No significant coil effect were found for vessel wall morphological parameters. SENSE acceleration affected some morphological parameters for 6- and 8-channel coils, but had no effect on the 30-channel coil. The 30-channel coil achieved high acceleration factors (10x) with significantly lower vessel g-factor values (ps ≤ 0.01), but lower vessel wall SNR and CNR values (ps ≤ 0.01). CONCLUSION:All four coils were capable of high-quality carotid MRI. The 30-channel coil is recommended when rapid image acquisition acceleration is required for 3D measurements, whereas 6- and 8-channel coils demonstrated the highest SNR performance.
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- 2019
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4. Embryonic cardiomyocyte, but not autologous stem cell transplantation, restricts infarct expansion, enhances ventricular function, and improves long-term survival.
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Leonie E Paulis, Alexandra M Klein, Alexander Ghanem, Tessa Geelen, Bram F Coolen, Martin Breitbach, Katrin Zimmermann, Klaas Nicolay, Bernd K Fleischmann, Wilhelm Roell, and Gustav J Strijkers
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Medicine ,Science - Abstract
AimsControversy exists in regard to the beneficial effects of transplanting cardiac or somatic progenitor cells upon myocardial injury. We have therefore investigated the functional short- and long-term consequences after intramyocardial transplantation of these cell types in a murine lesion model.Methods and resultsMyocardial infarction (MI) was induced in mice (n = 75), followed by the intramyocardial injection of 1-2×10(5) luciferase- and GFP-expressing embryonic cardiomyocytes (eCMs), skeletal myoblasts (SMs), mesenchymal stem cells (MSCs) or medium into the infarct. Non-treated healthy mice (n = 6) served as controls. Bioluminescence and fluorescence imaging confirmed the engraftment and survival of the cells up to seven weeks postoperatively. After two weeks MRI was performed, which showed that infarct volume was significantly decreased by eCMs only (14.8±2.2% MI+eCM vs. 26.7±1.6% MI). Left ventricular dilation was significantly decreased by transplantation of any cell type, but most efficiently by eCMs. Moreover, eCM treatment increased the ejection fraction and cardiac output significantly to 33.4±2.2% and 22.3±1.2 ml/min. In addition, this cell type exclusively and significantly increased the end-systolic wall thickness in the infarct center and borders and raised the wall thickening in the infarct borders. Repetitive echocardiography examinations at later time points confirmed that these beneficial effects were accompanied by better survival rates.ConclusionCellular cardiomyoplasty employing contractile and electrically coupling embryonic cardiomyocytes (eCMs) into ischemic myocardium provoked significantly smaller infarcts with less adverse remodeling and improved cardiac function and long-term survival compared to transplantation of somatic cells (SMs and MSCs), thereby proving that a cardiomyocyte phenotype is important to restore myocardial function.
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- 2013
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5. Altered brain fluid management in a rat model of arterial hypertension
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Daphne M. P. Naessens, Bram F. Coolen, Judith de Vos, Ed VanBavel, Gustav J. Strijkers, and Erik N. T. P. Bakker
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Aquaporin 4 ,Cerebral oedema ,Cerebrospinal fluid ,Hypertension ,Interstitial fluid ,Neurology. Diseases of the nervous system ,RC346-429 - Abstract
Abstract Background Proper neuronal function is directly dependent on the composition, turnover, and amount of interstitial fluid that bathes the cells. Most of the interstitial fluid is likely to be derived from ion and water transport across the brain capillary endothelium, a process that may be altered in hypertension due to vascular pathologies as endothelial dysfunction and arterial remodelling. In the current study, we investigated the effects of hypertension on the brain for differences in the water homeostasis. Methods Magnetic resonance imaging (MRI) was performed on a 7T small animal MRI system on male spontaneously hypertensive rats (SHR) and normotensive Wistar Kyoto rats (WKY) of 10 months of age. The MRI protocol consisted of T2-weighted scans followed by quantitative apparent diffusion coefficient (ADC) mapping to measure volumes of different anatomical structures and water diffusion respectively. After MRI, we assessed the spatial distribution of aquaporin 4 expression around blood vessels. Results MRI analysis revealed a significant reduction in overall brain volume and remarkably higher cerebroventricular volume in SHR compared to WKY. Whole brain ADC, as well as ADC values of a number of specific anatomical structures, were significantly lower in hypertensive animals. Additionally, SHR exhibited higher brain parenchymal water content. Immunohistochemical analysis showed a profound expression of aquaporin 4 around blood vessels in both groups, with a significantly larger area of influence around arterioles. Evaluation of specific brain regions revealed a decrease in aquaporin 4 expression around capillaries in the corpus callosum of SHR. Conclusion These results indicate a shift in the brain water homeostasis of adult hypertensive rats.
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- 2020
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6. Effect of long-term antihypertensive treatment on cerebrovascular structure and function in hypertensive rats
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Daphne M. P. Naessens, Judith de Vos, Edo Richard, Micha M. M. Wilhelmus, Cornelis A. M. Jongenelen, Edwin R. Scholl, Nicole N. van der Wel, Johannes A. Heijst, Charlotte E. Teunissen, Gustav J. Strijkers, Bram F. Coolen, Ed VanBavel, Erik N. T. P. Bakker, Anatomy and neurosciences, Amsterdam Neuroscience - Neurodegeneration, CCA - Imaging and biomarkers, Neurochemistry Laboratory, and Amsterdam Neuroscience - Neuroinfection & -inflammation
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All institutes and research themes of the Radboud University Medical Center ,Multidisciplinary ,Disorders of movement Donders Center for Medical Neuroscience [Radboudumc 3] - Abstract
Contains fulltext : 291340.pdf (Publisher’s version ) (Open Access) Midlife hypertension is an important risk factor for cognitive impairment and dementia, including Alzheimer's disease. We investigated the effects of long-term treatment with two classes of antihypertensive drugs to determine whether diverging mechanisms of blood pressure lowering impact the brain differently. Spontaneously hypertensive rats (SHR) were either left untreated or treated with a calcium channel blocker (amlodipine) or beta blocker (atenolol) until one year of age. The normotensive Wistar Kyoto rat (WKY) was used as a reference group. Both drugs lowered blood pressure equally, while only atenolol decreased heart rate. Cerebrovascular resistance was increased in SHR, which was prevented by amlodipine but not atenolol. SHR showed a larger carotid artery diameter with impaired pulsatility, which was prevented by atenolol. Cerebral arteries demonstrated inward remodelling, stiffening and endothelial dysfunction in SHR. Both treatments similarly improved these parameters. MRI revealed that SHR have smaller brains with enlarged ventricles. In addition, neurofilament light levels were increased in cerebrospinal fluid of SHR. However, neither treatment affected these parameters. In conclusion, amlodipine and atenolol both lower blood pressure, but elicit a different hemodynamic profile. Both medications improve cerebral artery structure and function, but neither drug prevented indices of brain damage in this model of hypertension.
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- 2023
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7. An isolated beating pig heart platform for a comprehensive evaluation of intracardiac blood flow with 4D flow MRI: a feasibility study
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Eva S. Peper, Alberto M. Leopaldi, Sjoerd van Tuijl, Bram F. Coolen, Gustav J. Strijkers, Jan Baan, R. Nils Planken, Arend de Weger, Aart J. Nederveen, Henk A. Marquering, and Pim van Ooij
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Heart valve diseases ,Isolated heart preparation ,Magnetic resonance imaging (4D flow) ,Swine ,Transcatheter aortic valve replacement ,Medical physics. Medical radiology. Nuclear medicine ,R895-920 - Abstract
Abstract Background Cardiac magnetic resonance imaging (MRI) in large animals is cumbersome for various reasons, including ethical considerations, costs of housing and maintenance, and need for anaesthesia. Our primary purpose was to show the feasibility of an isolated beating pig heart model for four-dimensional (4D) flow MRI for investigating intracardiac blood flow patterns and flow parameters using slaughterhouse side products. In addition, the feasibility of evaluating transcatheter aortic valve replacement (TAVR) in the model was investigated. Methods Seven slaughterhouse pig hearts were installed in the MRI-compatible isolated beating pig heart platform. First, Langendorff perfusion mode was established; then, the system switched to working mode, in which blood was actively pumped by the left ventricle. A pacemaker ensured a stable HR during 3-T MRI scanning. All hearts were submitted to human physiological conditions of cardiac output and stayed vital for several hours. Aortic flow was measured from which stroke volume, cardiac output, and regurgitation fraction were calculated. Results 4D flow MRI acquisitions were successfully conducted in all hearts. Stroke volume was 31 ± 6 mL (mean ± standard deviation), cardiac output 3.3 ± 0.9 L/min, and regurgitation fraction 16% ± 9%. With 4D flow, intracardiac and coronary flow patterns could be visualised in all hearts. In addition, we could study valve function and regurgitation in two hearts after TAVR. Conclusions The feasibility of 4D flow MRI in an isolated beating pig heart loaded to physiological conditions was demonstrated. The platform is promising for preclinical assessment of cardiac blood flow and function.
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- 2019
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8. Regional assessment of carotid artery pulse wave velocity using compressed sensing accelerated high temporal resolution 2D CINE phase contrast cardiovascular magnetic resonance
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Eva S. Peper, Gustav J. Strijkers, Katja Gazzola, Wouter V. Potters, Abdallah G. Motaal, Ilse K. Luirink, Barbara A. Hutten, Albert Wiegman, Pim van Ooij, Bert-Jan H. van den Born, Aart J. Nederveen, and Bram F. Coolen
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Arterial stiffness ,Pulse wave velocity ,Compressed sensing ,Phase contrast MRI ,Carotid atherosclerosis ,Diseases of the circulatory (Cardiovascular) system ,RC666-701 - Abstract
Abstract Background Cardiovascular magnetic resonance (CMR) allows for non-invasive assessment of arterial stiffness by means of measuring pulse wave velocity (PWV). PWV can be calculated from the time shift between two time-resolved flow curves acquired at two locations within an arterial segment. These flow curves can be derived from two-dimensional CINE phase contrast CMR (2D CINE PC CMR). While CMR-derived PWV measurements have proven to be accurate for the aorta, this is more challenging for smaller arteries such as the carotids due to the need for both high spatial and temporal resolution. In this work, we present a novel method that combines retrospectively gated 2D CINE PC CMR, high temporal binning of data and compressed sensing (CS) reconstruction to accomplish a temporal resolution of 4 ms. This enables accurate flow measurements and assessment of PWV in regional carotid artery segments. Methods Retrospectively gated 2D CINE PC CMR data acquired in the carotid artery was binned into cardiac frames of 4 ms length, resulting in an incoherently undersampled ky-t-space with a mean undersampling factor of 5. The images were reconstructed by a non-linear CS reconstruction using total variation over time as a sparsifying transform. PWV values were calculated from flow curves by using foot-to-foot and cross-correlation methods. Our method was validated against ultrasound measurements in a flow phantom setup representing the carotid artery. Additionally, PWV values of two groups of 23 young (30 ± 3 years, 12 [52%] women) and 10 elderly (62 ± 10 years, 5 [50%] women) healthy subjects were compared using the Wilcoxon rank-sum test. Results Our proposed method produced very similar flow curves as those measured using ultrasound at 1 ms temporal resolution. Reliable PWV estimation proved possible for transit times down to 7.5 ms. Furthermore, significant differences in PWV values between healthy young and elderly subjects were found (4.7 ± 1.0 m/s and 7.9 ± 2.4 m/s, respectively; p
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- 2018
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9. A unified model for reconstruction and R2* mapping of accelerated 7T data using the quantitative recurrent inference machine.
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Chaoping Zhang, Dimitrios Karkalousos, Pierre-Louis Bazin, Bram F. Coolen, Hugo Vrenken, Jan-Jakob Sonke, Birte U. Forstmann, Dirk H. J. Poot, and Matthan W. A. Caan
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- 2022
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10. Comparative in vitro and in vivo Evaluation of Different Iron Oxide-Based Contrast Agents to Promote Clinical Translation in Compliance with Patient Safety
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Harald Unterweger, Christina Janko, Tamara Folk, Iwona Cicha, Noémi Kovács, Gyula Gyebnár, Ildikó Horváth, Domokos Máthé, Kang H Zheng, Bram F Coolen, Erik Stroes, János Szebeni, Christoph Alexiou, László Dézsi, and Stefan Lyer
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Biomaterials ,International Journal of Nanomedicine ,Organic Chemistry ,Drug Discovery ,Biophysics ,Pharmaceutical Science ,Bioengineering ,General Medicine - Abstract
Harald Unterweger,1,* Christina Janko,1,* Tamara Folk,1 Iwona Cicha,1 Noémi Kovács,2 Gyula Gyebnár,3 Ildikó Horváth,4 Domokos Máthé,2,3 Kang H Zheng,5 Bram F Coolen,6 Erik Stroes,5 János Szebeni,7,8 Christoph Alexiou,1 László Dézsi,7,8,* Stefan Lyer1,* 1ENT-Department, Section of Experimental Oncology und Nanomedicine (SEON), Universitätsklinikum Erlangen, Erlangen, Germany; 2Hungarian Centre of Excellence for Molecular Medicine, Semmelweis University, Budapest, Hungary; 3Medical Imaging Centre, Semmelweis University, Budapest, Hungary; 4Department Biophysics and Radiation Biology, Semmelweis University, Budapest, Hungary; 5Department of Vascular Medicine, Amsterdam University Medical Centers, Amsterdam Cardiovascular Sciences, University of Amsterdam, Amsterdam, the Netherlands; 6Department of Biomedical Engineering and Physics, Amsterdam University Medical Centers, Amsterdam Cardiovascular Sciences, University of Amsterdam, Amsterdam, the Netherlands; 7Nanomedicine Research and Education Center, Institute of Translational Medicine, Semmelweis University, Budapest, Hungary; 8SeroScience Ltd, Budapest, Hungary*These authors contributed equally to this workCorrespondence: Harald Unterweger, Universitätsklinikum Erlangen, Glueckstr. 10a, Erlangen, 91054, Germany, Tel +49 9131 85-33142, Fax +49 9131 85-34828, Email harald.unterweger@uk-erlangen.deIntroduction: One of the major challenges in the clinical translation of nanoparticles is the development of formulations combining favorable efficacy and optimal safety. In the past, iron oxide nanoparticles have been introduced as an alternative for gadolinium-containing contrast agents; however, candidates available at the time were not free from adverse effects.Methods: Following the development of a potent iron oxide-based contrast agent SPIONDex, we now performed a systematic comparison of this formulation with the conventional contrast agent ferucarbotran and with ferumoxytol, taking into consideration their physicochemical characteristics, bio- and hemocompatibility in vitro and in vivo, as well as their liver imaging properties in rats.Results: The results demonstrated superior in vitro cyto-, hemo- and immunocompatibility of SPIONDex in comparison to the other two formulations. Intravenous administration of ferucarbotran or ferumoxytol induced strong complement activation-related pseudoallergy in pigs. In contrast, SPIONDex did not elicit any hypersensitivity reactions in the experimental animals. In a rat model, comparable liver imaging properties, but a faster clearance was demonstrated for SPIONDex.Conclusion: The results indicate that SPIONDex possess an exceptional safety compared to the other two formulations, making them a promising candidate for further clinical translation.Keywords: magnetic resonance imaging, MRI, nanomedicine, nanoparticles, complement activation, CARPA
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- 2023
11. PCA-based groupwise image registration for quantitative MRI.
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Wyke Huizinga, Dirk H. J. Poot, Jean-Marie Guyader, R. Klaassen, Bram F. Coolen, Matthijs van Kranenburg, Robert Jan van Geuns, André Uitterdijk, Mathias Polfliet, Jef Vandemeulebroucke, Alexander Leemans, Wiro J. Niessen, and Stefan Klein 0001
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- 2016
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12. Non-rigid Groupwise Image Registration for Motion Compensation in Quantitative MRI.
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Wyke Huizinga, Dirk H. J. Poot, Jean-Marie Guyader, Henk Smit, Matthijs van Kranenburg, Robert Jan van Geuns, André Uitterdijk, Heleen M. M. van Beusekom, Bram F. Coolen, Alexander Leemans, Wiro J. Niessen, and Stefan Klein 0001
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- 2014
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13. Whole-Heart 4D Flow MRI for Evaluation of Normal and Regurgitant Valvular Flow
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Bram F. Coolen, Jos J.M. Westenberg, Pim van Ooij, Carmen P.S. Blanken, Gustav J. Strijkers, Eva S. Peper, Aart J. Nederveen, R. Nils Planken, Lukas M. Gottwald, Graduate School, Radiology and Nuclear Medicine, ACS - Atherosclerosis & ischemic syndromes, ACS - Diabetes & metabolism, ACS - Pulmonary hypertension & thrombosis, Amsterdam Neuroscience - Brain Imaging, Amsterdam Movement Sciences, Biomedical Engineering and Physics, ACS - Heart failure & arrhythmias, AMS - Musculoskeletal Health, AMS - Sports, and AMS - Ageing & Vitality
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Intraclass correlation ,Population ,Imaging, Three-Dimensional ,Medicine ,Humans ,Radiology, Nuclear Medicine and imaging ,Prospective Studies ,education ,Stroke ,compressed sensing reconstruction ,education.field_of_study ,medicine.diagnostic_test ,whole-heart 4D flow MRI ,business.industry ,Echo-Planar Imaging ,Repeated measures design ,Reproducibility of Results ,Magnetic resonance imaging ,Stroke Volume ,Blood flow ,medicine.disease ,Magnetic Resonance Imaging ,sparse sampling ,EPI readout ,valvular regurgitation ,Undersampling ,Ventricular Function, Right ,business ,Nuclear medicine ,Beat (music) ,Blood Flow Velocity - Abstract
Background Pseudo-spiral Cartesian sampling with compressed sensing reconstruction has facilitated highly accelerated 4D flow magnetic resonance imaging (MRI) in various cardiovascular structures. However, unlike echo planar imaging (EPI)-accelerated 4D flow MRI, it has not been validated in whole-heart applications. Hypothesis Pseudo-spiral 4D flow MRI (PROUD [PROspective Undersampling in multiple Dimensions]) is comparable to EPI in robustness of valvular flow measurements and remains comparable as the undersampling factor is increased and scan time reduced. Study Type Prospective. Population Twelve healthy subjects and eight patients with valvular regurgitation. Field Strength/Sequence 3.0 T; PROUD and EPI 4D flow sequences, 2D flow and balanced steady-state free precession sequences. Assessment Valvular blood flow was quantified using valve tracking. PROUD- and EPI-based measurements of aortic (AV) and pulmonary (PV) flow volumes and left and right ventricular stroke volumes were tested for agreement with 2D MRI-based measurements. PROUD reconstructions with undersampling factors (R) of 9, 14, 28, and 56 were tested for intervalve consistency (per valve, compared to the other valves) and preservation of peak velocities and E/A ratios. Statistical Tests We used repeated measures ANOVA, Bland-Altman, Wilcoxon signed rank, and intraclass correlation coefficients. P < 0.05 was considered statistically significant. Results PROUD and EPI intervalve consistencies were not significantly different both in healthy subjects (valve-averaged mean difference [limits of agreement width]: 3.2 +/- 0.8 [8.7 +/- 1.1] mL/beat for PROUD, 5.5 +/- 2.9 [13.7 +/- 2.3] mL/beat for EPI, P = 0.07) and in patients with valvular regurgitation (2.3 +/- 1.2 [15.3 +/- 5.9] mL/beat for PROUD, 0.6 +/- 0.6 [19.3 +/- 2.9] mL/beat for EPI, P = 0.47). Agreement between EPI and PROUD was higher than between 4D flow (EPI or PROUD) and 2D MRI for forward flow, stroke volumes, and regurgitant volumes. Up to R = 28 in healthy subjects and R = 14 in patients with valvular regurgitation, PROUD intervalve consistency remained comparable to that of EPI. Peak velocities and E/A ratios were preserved up to R = 9. Conclusion PROUD is comparable to EPI in terms of intervalve consistency and may be used with higher undersampling factors to shorten scan times further. Level of Evidence 1 Technical Efficacy Stage 2
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- 2022
14. Iron Oxide Nanoparticle Uptake in Mouse Brachiocephalic Artery Atherosclerotic Plaque Quantified by T2-Mapping MRI
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Rik P. M. Moonen, Bram F. Coolen, Judith C. Sluimer, Mat J. A. P. Daemen, and Gustav J. Strijkers
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T2 mapping ,quantitative MRI ,USPIO ,atherosclerosis ,inflammation ,macrophages ,Pharmacy and materia medica ,RS1-441 - Abstract
The purpose of our study was to monitor the iron oxide contrast agent uptake in mouse brachiocephalic artery (BCA) atherosclerotic plaques in vivo by quantitative T2-mapping magnetic resonance imaging (MRI). Female ApoE−/− mice (n = 32) on a 15-week Western-type diet developed advanced plaques in the BCA and were injected with ultra-small superparamagnetic iron oxides (USPIOs). Quantitative in vivo MRI at 9.4 T was performed with a Malcolm-Levitt (MLEV) prepared T2-mapping sequence to monitor the nanoparticle uptake in the atherosclerotic plaque. Ex vivo histology and particle electron paramagnetic resonance (pEPR) were used for validation. Longitudinal high-resolution in vivo T2-value maps were acquired with consistent quality. Average T2 values in the plaque decreased from a baseline value of 34.5 ± 0.6 ms to 24.0 ± 0.4 ms one day after injection and partially recovered to an average T2 of 27 ± 0.5 ms after two days. T2 values were inversely related to iron levels in the plaque as determined by ex vivo particle electron paramagnetic resonance (pEPR). We concluded that MRI T2 mapping facilitates a robust quantitative readout for USPIO uptake in atherosclerotic plaques in arteries near the mouse heart.
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- 2021
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15. Comparative Analysis of Blood <scp> T 2 </scp> Values Measured by <scp> T 2 ‐TRIR </scp> and <scp>TRUST</scp>
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Koen P. A. Baas, Bram F. Coolen, Esben T. Petersen, Bart J. Biemond, Gustav J. Strijkers, and Aart J. Nederveen
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Radiology, Nuclear Medicine and imaging - Published
- 2022
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16. Self-gated, dynamic contrast-enhanced magnetic resonance imaging with compressed-sensing reconstruction for evaluating endothelial permeability in the aortic root of atherosclerotic mice
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Claudia Calcagno, John A. David, Abdallah G. Motaal, Bram F. Coolen, Thijs Beldman, Alexandra Corbin, Arnav Kak, Sarayu Ramachandran, Alison Pruzan, Arthi Sridhar, Raphael Soler, Christopher M. Faries, Zahi A. Fayad, Willem J. M. Mulder, Gustav J. Strijkers, Centre de résonance magnétique biologique et médicale (CRMBM), Aix Marseille Université (AMU)-Assistance Publique - Hôpitaux de Marseille (APHM)-Centre National de la Recherche Scientifique (CNRS), Service de Chirurgie vasculaire (Hôpital de la Timone adultes), Hôpital de la Timone [CHU - APHM] (TIMONE), Academic Medical Center - Academisch Medisch Centrum [Amsterdam] (AMC), University of Amsterdam [Amsterdam] (UvA), Biomedical Engineering and Physics, ACS - Atherosclerosis & ischemic syndromes, ANS - Brain Imaging, Medical Biochemistry, AMS - Musculoskeletal Health, and AMS - Sports
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[SDV.IB.IMA]Life Sciences [q-bio]/Bioengineering/Imaging ,DCE-MRI ,Contrast Media ,Aorta, Thoracic ,Magnetic Resonance Imaging ,Mice ,All institutes and research themes of the Radboud University Medical Center ,inflammation ,microvascularization ,self-gated ,Disease Progression ,Animals ,Molecular Medicine ,Female ,Radiology, Nuclear Medicine and imaging ,atherosclerosis ,Nanomedicine Radboud Institute for Molecular Life Sciences [Radboudumc 19] ,mouse ,Spectroscopy - Abstract
Contains fulltext : 290957.pdf (Publisher’s version ) (Open Access) High-risk atherosclerotic plaques are characterized by active inflammation and abundant leaky microvessels. We present a self-gated, dynamic contrast-enhanced magnetic resonance imaging (DCE-MRI) acquisition with compressed sensing reconstruction and apply it to assess longitudinal changes in endothelial permeability in the aortic root of Apoe(-/-) atherosclerotic mice during natural disease progression. Twenty-four, 8-week-old, female Apoe(-/-) mice were divided into four groups (n = 6 each) and imaged with self-gated DCE-MRI at 4, 8, 12, and 16 weeks after high-fat diet initiation, and then euthanized for CD68 immunohistochemistry for macrophages. Eight additional mice were kept on a high-fat diet and imaged longitudinally at the same time points. Aortic-root pseudo-concentration curves were analyzed using a validated piecewise linear model. Contrast agent wash-in and washout slopes (b(1) and b(2) ) were measured as surrogates of aortic root endothelial permeability and compared with macrophage density by immunohistochemistry. b(2) , indicating contrast agent washout, was significantly higher in mice kept on an high-fat diet for longer periods of time (p = 0.03). Group comparison revealed significant differences between mice on a high-fat diet for 4 versus 16 weeks (p = 0.03). Macrophage density also significantly increased with diet duration (p = 0.009). Spearman correlation between b(2) from DCE-MRI and macrophage density indicated a weak relationship between the two parameters (r = 0.28, p = 0.20). Validated piecewise linear modeling of the DCE-MRI data showed that the aortic root contrast agent washout rate is significantly different during disease progression. Further development of this technique from a single-slice to a 3D acquisition may enable better investigation of the relationship between in vivo imaging of endothelial permeability and atherosclerotic plaques' genetic, molecular, and cellular makeup in this important model of disease. 01 januari 2023
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- 2023
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17. Higher spatial resolution improves the interpretation of the extent of ventricular trabeculation
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Mary N. Sheppard, Allard C. van der Wal, Steffen E. Petersen, Vincent M. Christoffels, Bram F. Coolen, Hanne C. E. Riekerk, Gustav J. Strijkers, Roelof-Jan Oostra, Bjarke Jensen, Biomedical Engineering and Physics, ACS - Atherosclerosis & ischemic syndromes, AMS - Amsterdam Movement Sciences, Pathology, ACS - Heart failure & arrhythmias, Medical Biology, ACS - Amsterdam Cardiovascular Sciences, and ARD - Amsterdam Reproduction and Development
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Histology ,Heart Ventricles ,Population ,Cardiomyopathy ,Autopsy ,Context (language use) ,heart ,medicine ,Humans ,magnetic resonance imaging ,noncompaction ,education ,Molecular Biology ,Ecology, Evolution, Behavior and Systematics ,Original Paper ,education.field_of_study ,Isolated Noncompaction of the Ventricular Myocardium ,medicine.diagnostic_test ,business.industry ,Human heart ,Magnetic resonance imaging ,Cell Biology ,Anatomy ,medicine.disease ,Left ventricular noncompaction cardiomyopathy ,Original Papers ,medicine.anatomical_structure ,Ventricle ,Cardiomyopathies ,business ,cardiomyopathy ,Developmental Biology - Abstract
The ventricular walls of the human heart comprise an outer compact layer and an inner trabecular layer. In the context of an increased pre‐test probability, diagnosis left ventricular noncompaction cardiomyopathy is given when the left ventricle is excessively trabeculated in volume (trabecular vol >25% of total LV wall volume) or thickness (trabecular/compact (T/C) >2.3). Here, we investigated whether higher spatial resolution affects the detection of trabeculation and thus the assessment of normal and excessively trabeculated wall morphology. First, we screened left ventricles in 1112 post‐natal autopsy hearts. We identified five excessively trabeculated hearts and this low prevalence of excessive trabeculation is in agreement with pathology reports but contrasts the prevalence of approximately 10% of the population found by in vivo non‐invasive imaging. Using macroscopy, histology and low‐ and high‐resolution MRI, the five excessively trabeculated hearts were compared with six normal hearts and seven abnormally trabeculated and excessive trabeculation‐negative hearts. Some abnormally trabeculated hearts could be considered excessively trabeculated macroscopically because of a trabecular outflow or an excessive number of trabeculations, but they were excessive trabeculation‐negative when assessed with MRI‐based measurements (T/C, Jensen et al. show that higher spatial resolution may affect the sensitivity of diagnostic measurements of noncompaction and in addition could allow for novel measurements such as counting of trabeculations.
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- 2021
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18. A 72-channel receive array coil allows whole-heart cine MRI in two breath holds
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Hugo Klarenberg, Mark Gosselink, Bram F. Coolen, Tim Leiner, Aart J. Nederveen, Adrianus J. Bakermans, Hildo J. Lamb, S. Matthijs Boekholdt, Martijn Froeling, Gustav J. Strijkers, Biomedical Engineering and Physics, Cardiology, Graduate School, ACS - Heart failure & arrhythmias, ACS - Atherosclerosis & ischemic syndromes, Amsterdam Neuroscience - Brain Imaging, Radiology and Nuclear Medicine, ACS - Diabetes & metabolism, AMS - Ageing & Vitality, AMS - Sports, and AMS - Musculoskeletal Health
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Magnetic resonance imaging (cine) ,Stroke volume ,Heart ventricles ,Humans ,Magnetic Resonance Imaging, Cine ,Reproducibility of Results ,Radiology, Nuclear Medicine and imaging ,Healthy volunteers ,Ventricular Function, Left ,Breath holding - Abstract
Background A new 72-channel receive array coil and sensitivity encoding, compressed (C-SENSE) and noncompressed (SENSE), were investigated to decrease the number of breath-holds (BHs) for cardiac magnetic resonance (CMR). Methods Three-T CMRs were performed using the 72-channel coil with SENSE-2/4/6 and C-SENSE-2/4/6 accelerated short-axis cine two-dimensional balanced steady-state free precession sequences. A 16-channel coil with SENSE-2 served as reference. Ten healthy subjects were included. BH-time was kept under 15 s. Data were compared in terms of image quality, biventricular function, number of BHs, and scan times. Results BHs decreased from 7 with C-SENSE-2 (scan time 70 s, 2 slices/BH) to 3 with C-SENSE-4 (scan time 42 s, 4–5 slices/BH) and 2 with C-SENSE-6 (scan time 28 s, 7 slices/BH). Compared to reference, image sharpness was similar for SENSE-2/4/6, slightly inferior for C-SENSE-2/4/6. Blood-to-myocardium contrast was unaffected. C-SENSE-4/6 was given lower qualitative median scores, but images were considered diagnostically adequate to excellent, with C-SENSE-6 suboptimal. Biventricular end-diastolic (EDV), end-systolic (ESV) and stroke volumes, ejection fractions (EF), cardiac outputs, and left ventricle (LV)-mass were similar for SENSE-2/4/6 with no systematic bias and clinically appropriate limits of agreements. C-SENSE slightly underestimated LV-EDV (-6.38 ± 6.0 mL, p < 0.047), LV-ESV (-7.94 ± 6.0 mL, p < 0.030) and overestimated LV-EF (3.16 ± 3.10%; p < 0.047) with C-SENSE-4. Bland-Altman analyses revealed minor systematic biases in these variables with C-SENSE-2/4/6 and for LV-mass with C-SENSE-6. Conclusions Using the 72-channel coil, short-axis CMR for quantifying biventricular function was feasible in two BHs where SENSE slightly outperformed C-SENSE.
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- 2022
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19. Acceleration of neuromelanin-sensitive MRI sequences in the substantia nigra using standard MRI options
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Marieke, van der Pluijm, Elon D, Wallert, Bram F, Coolen, Kaithlyn T, Tjong Tjin Joe, Lieuwe, de Haan, Jan, Booij, and Elsmarieke, van de Giessen
- Abstract
Neuromelanin MRI (NM-MRI) is applied as a proxy measurement of dopaminergic functioning of the substantia nigra pars compacta (SN). To increase its clinical applicability, a fast and easily applicable NM-MRI sequence is needed. This study therefore compared accelerated NM-MRI sequences using standard available MRI options with a validated 2D gradient recalled echo NM-MRI sequence with off-resonance magnetization transfer (MT) pulse (2D-MToffRes).We used different combinations of compressed sense (CS) acceleration, repetition times (TR), and MT pulse to accelerate the validated 2D-MToffRes. In addition, we compared a recently introduced 3D sequence with the 2D-MToffRes.Our results show that the 2D sequences perform best with good to excellent reliability. Only excellent intraclass correlation coefficients were found for the CS factor 2 sequences.We conclude that there are several reliable approaches to accelerate NM-MRI, in particular by using CS.
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- 2022
20. Quantification of mouse heart left ventricular function, myocardial strain, and hemodynamic forces by cardiovascular magnetic resonance imaging
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Rob C. I. Wüst, Mariah R R Daal, David Hautemann, Bram F. Coolen, Ruslan R Garipov, Claudia Calcagno, Gustav J. Strijkers, Graduate School, ACS - Atherosclerosis & ischemic syndromes, ACS - Diabetes & metabolism, ANS - Brain Imaging, AMS - Amsterdam Movement Sciences, Biomedical Engineering and Physics, ACS - Heart failure & arrhythmias, AMS - Musculoskeletal Health, AMS - Sports, Physiology, and AMS - Ageing & Vitality
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Cardiac function curve ,medicine.medical_specialty ,Cardiac output ,Heart disease ,Heart Ventricles ,General Chemical Engineering ,Left ,Magnetic Resonance Imaging, Cine ,Heart Ventricles/diagnostic imaging ,General Biochemistry, Genetics and Molecular Biology ,Ventricular Function, Left ,Mice ,SDG 3 - Good Health and Well-being ,Predictive Value of Tests ,Internal medicine ,medicine ,Animals ,Ventricular Function ,cardiovascular diseases ,Prospective Studies ,Image analysis ,Hemodynamic forces ,Retrospective Studies ,Ejection fraction ,medicine.diagnostic_test ,General Immunology and Microbiology ,business.industry ,General Neuroscience ,Hemodynamics ,Reproducibility of Results ,Magnetic resonance imaging ,Stroke Volume ,medicine.disease ,Magnetic Resonance Imaging ,Myocardial Contraction ,Cine ,Myocardial strain ,Cardiology ,cardiovascular system ,business - Abstract
Mouse models have contributed significantly to understanding genetic and physiological factors involved in healthy cardiac function, how perturbations result in pathology, and how myocardial diseases may be treated. Cardiovascular magnetic resonance imaging (CMR) has become an indispensable tool for a comprehensive in vivo assessment of cardiac anatomy and function. This protocol shows detailed measurements of mouse heart left ventricular function, myocardial strain, and hemodynamic forces using 7-Tesla CMR. First, animal preparation and positioning in the scanner are demonstrated. Survey scans are performed for planning imaging slices in various short- and long-axis views. A series of prospective ECG-triggered short-axis (SA) movies (or CINE images) are acquired covering the heart from apex to base, capturing end-systolic and end-diastolic phases. Subsequently, single-slice, retrospectively gated CINE images are acquired in a midventricular SA view, and in 2-, 3-, and 4-chamber views, to be reconstructed into high-temporal resolution CINE images using custom-built and open-source software. CINE images are subsequently analyzed using dedicated CMR image analysis software. Delineating endomyocardial and epicardial borders in SA end-systolic and end-diastolic CINE images allows for the calculation of end-systolic and end-diastolic volumes, ejection fraction, and cardiac output. The midventricular SA CINE images are delineated for all cardiac time frames to extract a detailed volume-time curve. Its time derivative allows for the calculation of the diastolic function as the ratio of the early filling and atrial contraction waves. Finally, left ventricular endocardial walls in the 2-, 3-, and 4-chamber views are delineated using feature-tracking, from which longitudinal myocardial strain parameters and left ventricular hemodynamic forces are calculated. In conclusion, this protocol provides detailed in vivo quantification of the mouse cardiac parameters, which can be used to study temporal alterations in cardiac function in various mouse models of heart disease.
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- 2021
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21. The antibiotic doxycycline impairs cardiac mitochondrial and contractile function
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Diederik W. D. Kuster, Michel van Weeghel, Vida Alizadeh Tazehkandi, Luciënne Baks-Te Bulte, Gustav J. Strijkers, Bram F. Coolen, Ntsiki M. Held, Bianca J. J. M. Brundel, Riekelt H. Houtkooper, Mariah R R Daal, Marit Wiersma, Rob C. I. Wüst, Biomedical Engineering and Physics, ACS - Atherosclerosis & ischemic syndromes, AMS - Amsterdam Movement Sciences, Graduate School, ACS - Diabetes & metabolism, ANS - Brain Imaging, Laboratory Genetic Metabolic Diseases, AGEM - Amsterdam Gastroenterology Endocrinology Metabolism, ACS - Heart failure & arrhythmias, AMS - Musculoskeletal Health, AMS - Sports, Physiology, AMS - Ageing & Vitality, and Clinical chemistry
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0301 basic medicine ,Cytosol/metabolism ,Electron Transport Complex I/metabolism ,Male ,Aging ,Mitochondrial translation ,030204 cardiovascular system & hematology ,Mitochondrion ,Inbred C57BL ,Mitochondria, Heart ,Oxidative Phosphorylation ,lcsh:Chemistry ,Mitochondria, Heart/drug effects ,Mice ,0302 clinical medicine ,Cytosol ,Diastole ,Glucose/metabolism ,Glycolysis ,Myocytes, Cardiac ,Experimental/pathology ,lcsh:QH301-705.5 ,Spectroscopy ,Oxidative Phosphorylation/drug effects ,Doxycycline ,Ejection fraction ,Chemistry ,Electron Transport Complex II ,Nuclear Proteins ,General Medicine ,Computer Science Applications ,Anti-Bacterial Agents ,Mitochondria ,Drosophila melanogaster ,Drosophila melanogaster/drug effects ,Calcium Signaling/drug effects ,Myocardial Contraction/drug effects ,Electron Transport Complex II/metabolism ,medicine.drug ,medicine.medical_specialty ,Myocytes, Cardiac/drug effects ,Calcium/metabolism ,Mitochondrial Proteins/metabolism ,Cell Respiration ,Oxidative phosphorylation ,Catalysis ,Article ,Diabetes Mellitus, Experimental ,Anti-Bacterial Agents/pharmacology ,Inorganic Chemistry ,Contractility ,Mitochondrial Proteins ,Doxycycline/pharmacology ,03 medical and health sciences ,Glycolysis/drug effects ,SDG 3 - Good Health and Well-being ,Internal medicine ,medicine ,Cell Respiration/drug effects ,Diabetes Mellitus ,Animals ,Diabetes Mellitus, Experimental/pathology ,Calcium Signaling ,Calcium handling ,Physical and Theoretical Chemistry ,Molecular Biology ,Diastole/drug effects ,Nuclear Proteins/metabolism ,Myocytes ,Electron Transport Complex I ,Organic Chemistry ,Myocardial Contraction ,Heart/drug effects ,Rats ,Mice, Inbred C57BL ,Aging/metabolism ,030104 developmental biology ,Endocrinology ,Glucose ,Cardiac/drug effects ,lcsh:Biology (General) ,lcsh:QD1-999 ,Cardiac contractility ,Calcium ,Mitochondrial function - Abstract
Tetracycline antibiotics act by inhibiting bacterial protein translation. Given the bacterial ancestry of mitochondria, we tested the hypothesis that doxycycline—which belongs to the tetracycline class—reduces mitochondrial function, and results in cardiac contractile dysfunction in cultured H9C2 cardiomyoblasts, adult rat cardiomyocytes, in Drosophila and in mice. Ampicillin and carbenicillin were used as control antibiotics since these do not interfere with mitochondrial translation. In line with its specific inhibitory effect on mitochondrial translation, doxycycline caused a mitonuclear protein imbalance in doxycycline-treated H9C2 cells, reduced maximal mitochondrial respiration, particularly with complex I substrates, and mitochondria appeared fragmented. Flux measurements using stable isotope tracers showed a shift away from OXPHOS towards glycolysis after doxycycline exposure. Cardiac contractility measurements in adult cardiomyocytes and Drosophila melanogaster hearts showed an increased diastolic calcium concentration, and a higher arrhythmicity index. Systolic and diastolic dysfunction were observed after exposure to doxycycline. Mice treated with doxycycline showed mitochondrial complex I dysfunction, reduced OXPHOS capacity and impaired diastolic function. Doxycycline exacerbated diastolic dysfunction and reduced ejection fraction in a diabetes mouse model vulnerable for metabolic derangements. We therefore conclude that doxycycline impairs mitochondrial function and causes cardiac dysfunction.
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- 2021
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22. Retrospective Camera‐Based Respiratory Gating in Clinical Whole‐Heart 4D Flow MRI
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Aart J. Nederveen, R. Nils Planken, Lukas M. Gottwald, Carmen P.S. Blanken, Joao Tourais, Bram F. Coolen, S. Matthijs Boekholdt, Lilian J. Meijboom, Jouke Smink, Gustav J. Strijkers, Pim van Ooij, Radiology and nuclear medicine, Amsterdam Movement Sciences, ACS - Atherosclerosis & ischemic syndromes, ACS - Diabetes & metabolism, Amsterdam Neuroscience - Brain Imaging, Graduate School, Radiology and Nuclear Medicine, ACS - Pulmonary hypertension & thrombosis, Cardiology, Biomedical Engineering and Physics, ACS - Heart failure & arrhythmias, AMS - Musculoskeletal Health, AMS - Sports, and AMS - Ageing & Vitality
- Subjects
Respiratory-Gated Imaging Techniques ,Respiratory gating ,Gating ,Signal-To-Noise Ratio ,Respiratory signal ,Imaging ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,0302 clinical medicine ,Image quality analysis ,Imaging, Three-Dimensional ,Motion artifacts ,Medicine ,Humans ,Radiology, Nuclear Medicine and imaging ,Respiratory system ,Research Articles ,Original Research ,Retrospective Studies ,4D flow MRI ,business.industry ,Study Type ,Respiratory motion ,Reproducibility of Results ,Magnetic Resonance Imaging ,respiratory gating ,Three-Dimensional ,Camera ,Nuclear medicine ,business ,navigator ,Artifacts ,Cardiac - Abstract
Background: Respiratory gating is generally recommended in 4D flow MRI of the heart to avoid blurring and motion artifacts. Recently, a novel automated contact-less camera-based respiratory motion sensor has been introduced. Purpose: To compare camera-based respiratory gating (CAM) with liver-lung-navigator-based gating (NAV) and no gating (NO) for whole-heart 4D flow MRI. Study Type: Retrospective. Subjects: Thirty two patients with a spectrum of cardiovascular diseases. Field Strength/Sequence: A 3T, 3D-cine spoiled-gradient-echo-T1-weighted-sequence with flow-encoding in three spatial directions. Assessment: Respiratory phases were derived and compared against each other by cross-correlation. Three radiologists/cardiologist scored images reconstructed with camera-based, navigator-based, and no respiratory gating with a 4-point Likert scale (qualitative analysis). Quantitative image quality analysis, in form of signal-to-noise ratio (SNR) and liver-lung-edge (LLE) for sharpness and quantitative flow analysis of the valves were performed semi-automatically. Statistical Tests: One-way repeated measured analysis of variance (ANOVA) with Wilks's lambda testing and follow-up pairwise comparisons. Significance level of P ≤ 0.05. Krippendorff's-alpha-test for inter-rater reliability. Results: The respiratory signal analysis revealed that CAM and NAV phases were highly correlated (C = 0.93 ± 0.09, P < 0.01). Image scoring showed poor inter-rater reliability and no significant differences were observed (P ≥ 0.16). The image quality comparison showed that NAV and CAM were superior to NO with higher SNR (P = 0.02) and smaller LLE (P < 0.01). The quantitative flow analysis showed significant differences between the three respiratory-gated reconstructions in the tricuspid and pulmonary valves (P ≤ 0.05), but not in the mitral and aortic valves (P > 0.05). Pairwise comparisons showed that reconstructions without respiratory gating were different in flow measurements to either CAM or NAV or both, but no differences were found between CAM and NAV reconstructions. Data Conclusion: Camera-based respiratory gating performed as well as conventional liver-lung-navigator-based respiratory gating. Quantitative image quality analysis showed that both techniques were equivalent and superior to no-gating-reconstructions. Quantitative flow analysis revealed local flow differences (tricuspid/pulmonary valves) in images of no-gating-reconstructions, but no differences were found between images reconstructed with camera-based and navigator-based respiratory gating. Level of Evidence: 3. Technical Efficacy: Stage 2.
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- 2021
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23. Fetal Tricuspid Valve Agenesis/Atresia: Testing Predictions of the Embryonic Etiology
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Jaeike W. Faber, Marieke F. J. Buijtendijk, Hugo Klarenberg, Arja Suzanne Vink, Bram F. Coolen, Antoon F. M. Moorman, Vincent M. Christoffels, Sally-Ann Clur, Bjarke Jensen, Pediatric surgery, Graduate School, Medical Biology, ACS - Heart failure & arrhythmias, Amsterdam Reproduction & Development (AR&D), Cardiology, Paediatric Cardiology, Amsterdam Cardiovascular Sciences, Biomedical Engineering and Physics, ACS - Atherosclerosis & ischemic syndromes, and Amsterdam Movement Sciences
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Congenital malformations ,Morphometry ,Ultrasound ,Pediatrics, Perinatology and Child Health ,cardiovascular system ,cardiovascular diseases ,Development ,Cardiology and Cardiovascular Medicine - Abstract
Tricuspid valve agenesis/atresia (TVA) is a congenital cardiac malformation where the tricuspid valve is not formed. It is hypothesized that TVA results from a failure of the normal rightward expansion of the atrioventricular canal (AVC). We tested predictions of this hypothesis by morphometric analyses of the AVC in fetal hearts. We used high-resolution MRI and ultrasonography on a post-mortem fetal heart with TVA and with tricuspid valve stenosis (TVS) to validate the position of measurement landmarks that were to be applied to clinical echocardiograms. This revealed a much deeper right atrioventricular sulcus in TVA than in TVS. Subsequently, serial echocardiograms of in utero fetuses between 12 and 38 weeks of gestation were included (n = 23 TVA, n = 16 TVS, and n = 74 controls) to establish changes in AVC width and ventricular dimensions over time. Ventricular length and width and estimated fetal weight all increased significantly with age, irrespective of diagnosis. Heart rate did not differ between groups. However, in the second trimester, in TVA, the ratio of AVC to ventricular width was significantly lower compared to TVS and controls. This finding supports the hypothesis that TVA is due to a failed rightward expansion of the AVC. Notably, we found in the third trimester that the AVC to ventricular width normalized in TVA fetuses as their mitral valve area was greater than in controls. Hence, TVA associates with a quantifiable under-development of the AVC. This under-development is obscured in the third trimester, likely because of adaptational growth that allows for increased stroke volume of the left ventricle.
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- 2022
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24. Whole‐Heart 4D Flow MRI for Evaluation of Normal and Regurgitant Valvular Flow: A Quantitative Comparison Between Pseudo‐Spiral Sampling and EPI Readout
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Carmen P.S. Blanken, Lukas M. Gottwald, Jos J.M. Westenberg, Eva S. Peper, Bram F. Coolen, Gustav J. Strijkers, Aart J. Nederveen, R. Nils Planken, and Pim Ooij
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Radiology, Nuclear Medicine and imaging - Published
- 2022
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25. Magnetic Resonance Imaging–Derived Renal Oxygenation and Perfusion During Continuous, Steady‐State Angiotensin‐II Infusion in Healthy Humans
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René van der Bel, Bram F. Coolen, Aart J. Nederveen, Wouter V. Potters, Hein J. Verberne, Liffert Vogt, Erik S. G. Stroes, and C. T. Paul Krediet
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blood oxygen level–dependent ,chronic kidney disease ,magnetic resonance imaging ,renal oxygenation ,renal perfusion ,renin angiotensin system ,Diseases of the circulatory (Cardiovascular) system ,RC666-701 - Abstract
BackgroundThe role of kidney hypoxia is considered pivotal in the progression of chronic kidney disease. A widely used method to assess kidney oxygenation is blood oxygen level dependent (BOLD)–magnetic resonance imaging (MRI), but its interpretation remains problematic. The BOLD‐MRI signal is the result of kidney oxygen consumption (a proxy of glomerular filtration) and supply (ie, glomerular perfusion). Therefore, we hypothesized that with pharmacological modulation of kidney blood flow, renal oxygenation, as assessed by BOLD‐MRI, correlates to filtration fraction (ie, glomerular filtration rate/effective renal plasma flow) in healthy humans. Methods and ResultsEight healthy volunteers were subjected to continuous angiotensin‐II infusion at 0.3, 0.9, and 3.0 ng/kg per minute. At each dose, renal oxygenation and blood flow were assessed using BOLD and phase‐contrast MRI. Subsequently, “gold standard” glomerular filtration rate/effective renal plasma flow measurements were performed under the same conditions. Renal plasma flow decreased dose dependently from 660±146 to 467±103 mL/min per 1.73 m2 (F[3, 21]=33.3, P
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- 2016
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26. High Spatiotemporal Resolution 4D Flow MRI of Intracranial Aneurysms at 7T in 10 Minutes
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Johannes Töger, Eva S. Peper, P. van Ooij, Aart J. Nederveen, Lukas M. Gottwald, K. Markenroth Bloch, Bram F. Coolen, Gustav J. Strijkers, Graduate School, ACS - Atherosclerosis & ischemic syndromes, ACS - Diabetes & metabolism, ANS - Brain Imaging, AMS - Amsterdam Movement Sciences, Biomedical Engineering and Physics, ACS - Heart failure & arrhythmias, Radiology and Nuclear Medicine, and AMS - Sports
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Adult ,Male ,Neuroimaging ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,0302 clinical medicine ,Shear stress ,Humans ,Medicine ,Radiology, Nuclear Medicine and imaging ,Phantoms, Imaging ,business.industry ,Adult Brain ,Hemodynamics ,Intracranial Aneurysm ,Repeatability ,Blood flow ,Stroke volume ,Middle Aged ,Magnetic Resonance Imaging ,Healthy Volunteers ,Volumetric flow rate ,Flow (mathematics) ,Cerebrovascular Circulation ,Temporal resolution ,Female ,Neurology (clinical) ,Spatiotemporal resolution ,business ,Nuclear medicine ,030217 neurology & neurosurgery - Abstract
BACKGROUND AND PURPOSE: Patients with intracranial aneurysms may benefit from 4D flow MR imaging because the derived wall shear stress is considered a useful marker for risk assessment and growth of aneurysms. However, long scan times limit the clinical implementation of 4D flow MR imaging. Therefore, this study aimed to investigate whether highly accelerated, high resolution, 4D flow MR imaging at 7T provides reliable quantitative blood flow values in intracranial arteries and aneurysms. MATERIALS AND METHODS: We used pseudospiral Cartesian undersampling with compressed sensing reconstruction to achieve high spatiotemporal resolution (0.5 mm isotropic, ∼30 ms) in a scan time of 10 minutes. We analyzed the repeatability of accelerated 4D flow scans and compared flow rates, stroke volume, and the pulsatility index with 2D flow and conventional 4D flow MR imaging in a flow phantom and 15 healthy subjects. Additionally, accelerated 4D flow MR imaging with high spatiotemporal resolution was acquired in 5 patients with aneurysms to derive wall shear stress. RESULTS: Flow-rate bias compared with 2D flow was lower for accelerated than for conventional 4D flow MR imaging (0.31 ± 0.13, P = .22, versus 0.79 ± 0.17 mL/s, P
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- 2020
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27. Longitudinal CMR assessment of cardiac global longitudinal strain and hemodynamic forces in a mouse model of heart failure
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Mariah R R, Daal, Gustav J, Strijkers, David J, Hautemann, Aart J, Nederveen, Rob C I, Wüst, and Bram F, Coolen
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Heart Failure ,Mice ,Disease Models, Animal ,Predictive Value of Tests ,Hemodynamics ,Animals ,Stroke Volume ,Retrospective Studies - Abstract
To longitudinally assess left ventricle (LV) global longitudinal strain (GLS) and hemodynamic forces during the early stages of cardiac dysfunction in a mouse model of heart failure with preserved ejection fraction (HFpEF). Cardiac MRI measurements were performed in control mice (n = 6), and db/db mice (n = 7), whereby animals were scanned four times between the age of 11-15 weeks. After the first scan, the db/db animals received a doxycycline intervention to accelerate progression of HFpEF. Systolic function was evaluated based on a series of prospectively ECG-triggered short-axis CINE images acquired from base to apex. Cardiac GLS and hemodynamic forces values were evaluated based on high frame rate retrospectively gated 2-, 3-, and 4-chamber long-axis CINE images. Ejection fraction (EF) was not different between control and db/db animals, despite that cardiac output, as well as end systolic and end diastolic volume were significantly higher in control animals. Whereas GLS parameters were not significantly different between groups, hemodynamic force root mean square (RMS) values, as well as average hemodynamic forces and the ratio between hemodynamic forces in the inferolateral-anteroseptal and apical-basal direction were lower in db/db mice compared to controls. More importantly, hemodynamic forces parameters showed a significant interaction effect between time and group. Our results indicated that hemodynamic forces parameters were the only functional outcome measure that showed distinct temporal differences between groups. As such, changes in hemodynamic forces reflect early alterations in cardiac function which can be of added value in (pre)clinical research on HFpEF.
- Published
- 2022
28. A Randomized Controlled Trial on the Effects of a 12-Week High- vs. Low-Intensity Exercise Intervention on Hippocampal Structure and Function in Healthy, Young Adults
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Antonia Kaiser, Liesbeth Reneman, Michelle M. Solleveld, Bram F. Coolen, Erik J. A. Scherder, Linda Knutsson, Atle Bjørnerud, Matthias J. P. van Osch, Jannie P. Wijnen, Paul J. Lucassen, Anouk Schrantee, Graduate School, Adult Psychiatry, APH - Personalized Medicine, Amsterdam Neuroscience - Brain Imaging, Amsterdam Neuroscience - Compulsivity, Impulsivity & Attention, Amsterdam Neuroscience, Radiology and Nuclear Medicine, APH - Mental Health, Biomedical Engineering and Physics, ACS - Atherosclerosis & ischemic syndromes, Amsterdam Movement Sciences, ACS - Heart failure & arrhythmias, Structural and Functional Plasticity of the nervous system (SILS, FNWI), and Radiology and nuclear medicine
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Psychiatry ,Psychiatry and Mental health ,angiogenesis ,vasculature ,exercise ,hippocampus ,neuro-metabolites ,RC435-571 ,multimodal ,perfusion ,Original Research ,MRI - Abstract
Physical exercise affects hippocampal structure and function, but the underlying neural mechanisms and the effects of exercise intensity remain incompletely understood. Therefore, we undertook a comprehensive, multi-modal 3T and 7T MRI randomized controlled trial (Netherlands Trial Register - NL5847) in which we randomized 52 young, non-athletic volunteers to a 12-week low- or high-intensity exercise program. Using state-of-the-art methods, we investigated changes in hippocampal volume, as well as changes in vasculature, neuro-metabolites, and peripheral growth factors as potential underpinnings. Cardiorespiratory fitness improved over time (p < 0.001), but no interaction with exercise intensity was found (p = 0.48). Accordingly, we did not observe significant interactions between exercise condition and time on MRI measures (all p > 0.06). However, we found a significant decrease in right hippocampal volume (p < 0.01), an increase in left hippocampal glutathione (p < 0.01), and a decrease of left hippocampal cerebral blood volume (p = 0.01) over time, regardless of exercise condition. Additional exploratory analyses showed that changes in brain-derived neurotrophic factor (p = 0.01), insulin-like growth-factor (p = 0.03), and dorsal anterior cingulate cortex N-acetyl-aspartate levels (p = 0.01) were positively associated with cardiorespiratory fitness changes. Furthermore, a trend toward a positive association of fitness and gray-matter cerebral blood flow (p = 0.06) was found. Our results do not provide evidence for differential effects between high-intensity (aerobic) and low-intensity (toning) exercise on hippocampal structure and function in young adults. However, we show small but significant effects of exercise on hippocampal volume, neurometabolism and vasculature across exercise conditions. Moreover, our exploratory results suggest that exercise might not specifically only benefit hippocampal structure and function, but rather has a more widespread effect. These findings suggest that, in agreement with previous MRI studies demonstrating moderate to strong effects in elderly and diseased populations, but none to only mild effects in young healthy cohorts, the benefits of exercise on the studied brain measures may be age-dependent and restorative rather than stimulatory. Our study highlights the importance of a multi-modal, whole-brain approach to assess macroscopic and microscopic changes underlying exercise-induced brain changes, to better understand the role of exercise as a potential non-pharmacological intervention.
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- 2022
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29. Longitudinal CMR assessment of cardiac global longitudinal strain and hemodynamic forces in a mouse model of heart failure
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Mariah R. R. Daal, Gustav J. Strijkers, David J. Hautemann, Aart J. Nederveen, Rob C. I. Wüst, Bram F. Coolen, Biomedical Engineering and Physics, Graduate School, ACS - Atherosclerosis & ischemic syndromes, ACS - Diabetes & metabolism, Amsterdam Neuroscience - Brain Imaging, Amsterdam Movement Sciences, ACS - Heart failure & arrhythmias, AMS - Musculoskeletal Health, AMS - Sports, Radiology and Nuclear Medicine, and AMS - Ageing & Vitality
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Mouse ,Hemodynamic forces ,Diabetes ,Heart failure ,HFpEF ,MRI ,Strain - Abstract
To longitudinally assess left ventricle (LV) global longitudinal strain (GLS) and hemodynamic forces during the early stages of cardiac dysfunction in a mouse model of heart failure with preserved ejection fraction (HFpEF). Cardiac MRI measurements were performed in control mice (n = 6), and db/db mice (n = 7), whereby animals were scanned four times between the age of 11–15 weeks. After the first scan, the db/db animals received a doxycycline intervention to accelerate progression of HFpEF. Systolic function was evaluated based on a series of prospectively ECG-triggered short-axis CINE images acquired from base to apex. Cardiac GLS and hemodynamic forces values were evaluated based on high frame rate retrospectively gated 2-, 3-, and 4-chamber long-axis CINE images. Ejection fraction (EF) was not different between control and db/db animals, despite that cardiac output, as well as end systolic and end diastolic volume were significantly higher in control animals. Whereas GLS parameters were not significantly different between groups, hemodynamic force root mean square (RMS) values, as well as average hemodynamic forces and the ratio between hemodynamic forces in the inferolateral-anteroseptal and apical–basal direction were lower in db/db mice compared to controls. More importantly, hemodynamic forces parameters showed a significant interaction effect between time and group. Our results indicated that hemodynamic forces parameters were the only functional outcome measure that showed distinct temporal differences between groups. As such, changes in hemodynamic forces reflect early alterations in cardiac function which can be of added value in (pre)clinical research on HFpEF.
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- 2022
30. Comparative Analysis of Blood T
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Koen P A, Baas, Bram F, Coolen, Esben T, Petersen, Bart J, Biemond, Gustav J, Strijkers, and Aart J, Nederveen
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Acetazolamide ,Adult ,Oxygen ,Young Adult ,Brain ,Humans ,Female ,Anemia, Sickle Cell ,Oximetry ,Prospective Studies ,Magnetic Resonance Imaging - Abstract
Venous blood oxygenation (Yv), which can be derived from venous blood TTo optimize and compare TProspective.A total of 12 healthy volunteers (six female, 27 ± 3 years old) and 7 patients with sickle cell disease (five female, 32 ± 12 years old).3 T; turbo field echo planar imaging (TFEPI), echo planar imaging (EPI), and fast field echo (FFE).TShapiro-Wilk, one-sample and paired-sample t-test, repeated measures ANOVA, mixed linear model, Bland-Altman analysis and correlation analysis. Sidak multiple-comparison correction was performed. Significance level was 0.05.In controls, TTRUST and T2 TECHNICAL EFFICACY: Stage 2.
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- 2021
31. Double delay alternating with nutation for tailored excitation facilitates banding-free isotropic high-resolution intracranial vessel wall imaging
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Guillaume Gilbert, Jasper Schoormans, Ernst S. Kooreman, Aart J. Nederveen, Olivia Viessmann, Naomi de Winter, Jaco J.M. Zwanenburg, Gustav J. Strijkers, Bram F. Coolen, Charles B. L. M. Majoie, Jeroen C.W. Siero, Biomedical Engineering and Physics, ACS - Atherosclerosis & ischemic syndromes, Amsterdam Movement Sciences, Radiology and Nuclear Medicine, ACS - Microcirculation, Amsterdam Neuroscience - Neurovascular Disorders, ACS - Heart failure & arrhythmias, AMS - Musculoskeletal Health, AMS - Sports, ACS - Diabetes & metabolism, AMS - Ageing & Vitality, and Spinoza Centre for Neuroimaging
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Male ,Materials science ,Image quality ,High resolution ,Signal-To-Noise Ratio ,Slow Flow ,030218 nuclear medicine & medical imaging ,Scan time ,03 medical and health sciences ,0302 clinical medicine ,Humans ,Computer Simulation ,Radiology, Nuclear Medicine and imaging ,Research Articles ,Spectroscopy ,Cerebrospinal Fluid ,Pulse (signal processing) ,Nutation ,Isotropy ,Brain ,Middle Aged ,Magnetic Resonance Imaging ,DANTE ,Feasibility Studies ,Molecular Medicine ,Female ,CSF suppression ,atherosclerosis ,Algorithms ,030217 neurology & neurosurgery ,Excitation ,Research Article ,Biomedical engineering ,intracranial vessel wall imaging - Abstract
The purpose of this study was to evaluate the use of a double delay alternating with nutation for tailored excitation (D‐DANTE)‐prepared sequence for banding‐free isotropic high‐resolution intracranial vessel wall imaging (IC‐VWI) and to compare its performance with regular DANTE in terms of signal‐to‐noise ratio (SNR) as well as cerebrospinal fluid (CSF) and blood suppression efficiency. To this end, a D‐DANTE–prepared 3D turbo spin echo sequence was implemented by interleaving two separate DANTE pulse trains with different RF phase‐cycling schemes, but keeping all other DANTE parameters unchanged, including the total number of pulses and total preparation time. This achieved a reduction of the banding distance compared with regular DANTE enabling banding‐free imaging up to higher resolutions. Bloch simulations assuming static vessel wall and flowing CSF spins were performed to compare DANTE and D‐DANTE in terms of SNR and vessel wall/CSF contrast. Similar image quality measures were assessed from measurements on 13 healthy middle‐aged volunteers. Both simulation and in vivo results showed that D‐DANTE had only slightly lower vessel wall/CSF and vessel wall/blood contrast‐to‐noise ratio values compared with regular DANTE, which originated from a 10%–15% reduction in vessel wall SNR but not from reduced CSF or blood suppression efficiency. As anticipated, IC‐VWI acquisitions showed that D‐DANTE can successfully remove banding artifacts compared with regular DANTE with equal scan time or DANTE preparation length. Moreover, application was demonstrated in a patient with an intracranial aneurysm, indicating improved robustness to slow flow artifacts compared with clinically available 3D turbo spin echo scans. In conclusion, D‐DANTE provides banding artifact‐free IC‐VWI up to higher isotropic resolutions compared with regular DANTE. This allows for a more flexible choice of DANTE preparation parameters in high‐resolution IC‐VWI protocols., An alternative to DANTE‐prepared 3D TSE intracranial vessel wall imaging (IC‐VWI) is presented, called Double DANTE (D‐DANTE). We show that D‐DANTE allows for banding‐free IC‐VWI up to higher resolutions compared with regular DANTE with an equal number of DANTE pulses and preparation length. We additionally assessed the influence of D‐DANTE on SNR and flow‐suppression efficiency.
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- 2021
32. Coronary Flow Assessment Using Accelerated 4D Flow MRI With Respiratory Motion Correction
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Carmen P.S. Blanken, Bram F. Coolen, Aart J. Nederveen, Eric M. Schrauben, Diederik F. van Wijk, Eva S. Peper, R. Nils Planken, Lukas M. Gottwald, Pim van Ooij, Gustav J. Strijkers, Jan J. Piek, Graduate School, Radiology and Nuclear Medicine, ACS - Atherosclerosis & ischemic syndromes, ACS - Diabetes & metabolism, ACS - Pulmonary hypertension & thrombosis, ANS - Brain Imaging, AMS - Amsterdam Movement Sciences, Biomedical Engineering and Physics, ACS - Microcirculation, Cardiology, ACS - Heart failure & arrhythmias, AMS - Musculoskeletal Health, AMS - Sports, and AMS - Ageing & Vitality
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Histology ,Coefficient of variation ,respiratory motion correction ,Biomedical Engineering ,Diastole ,Bioengineering ,Coronary artery disease ,Left coronary artery ,medicine.artery ,medicine ,blood flow quantification ,Original Research ,4D flow MRI ,medicine.diagnostic_test ,business.industry ,2D flow MRI ,Bioengineering and Biotechnology ,left coronary artery ,Magnetic resonance imaging ,Repeatability ,Blood flow ,medicine.disease ,Concordance correlation coefficient ,business ,Nuclear medicine ,TP248.13-248.65 ,Biotechnology - Abstract
Magnetic resonance imaging (MRI) can potentially be used for non-invasive screening of patients with stable angina pectoris to identify probable obstructive coronary artery disease. MRI-based coronary blood flow quantification has to date only been performed in a 2D fashion, limiting its clinical applicability. In this study, we propose a framework for coronary blood flow quantification using accelerated 4D flow MRI with respiratory motion correction and compressed sensing image reconstruction. We investigate its feasibility and repeatability in healthy subjects at rest. Fourteen healthy subjects received 8 times-accelerated 4D flow MRI covering the left coronary artery (LCA) with an isotropic spatial resolution of 1.0 mm3. Respiratory motion correction was performed based on 1) lung-liver navigator signal, 2) real-time monitoring of foot-head motion of the liver and LCA by a separate acquisition, and 3) rigid image registration to correct for anterior-posterior motion. Time-averaged diastolic LCA flow was determined, as well as time-averaged diastolic maximal velocity (VMAX) and diastolic peak velocity (VPEAK). 2D flow MRI scans of the LCA were acquired for reference. Scan-rescan repeatability and agreement between 4D flow MRI and 2D flow MRI were assessed in terms of concordance correlation coefficient (CCC) and coefficient of variation (CV). The protocol resulted in good visibility of the LCA in 11 out of 14 subjects (six female, five male, aged 28 ± 4 years). The other 3 subjects were excluded from analysis. Time-averaged diastolic LCA flow measured by 4D flow MRI was 1.30 ± 0.39 ml/s and demonstrated good scan-rescan repeatability (CCC/CV = 0.79/20.4%). Time-averaged diastolic VMAX (17.2 ± 3.0 cm/s) and diastolic VPEAK (24.4 ± 6.5 cm/s) demonstrated moderate repeatability (CCC/CV = 0.52/19.0% and 0.68/23.0%, respectively). 4D flow- and 2D flow-based diastolic LCA flow agreed well (CCC/CV = 0.75/20.1%). Agreement between 4D flow MRI and 2D flow MRI was moderate for both diastolic VMAX and VPEAK (CCC/CV = 0.68/20.3% and 0.53/27.0%, respectively). In conclusion, the proposed framework of accelerated 4D flow MRI equipped with respiratory motion correction and compressed sensing image reconstruction enables repeatable diastolic LCA flow quantification that agrees well with 2D flow MRI.
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- 2021
33. An isolated beating pig heart platform for a comprehensive evaluation of intracardiac blood flow with 4D flow MRI: a feasibility study
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Jan Baan, Aart J. Nederveen, Bram F. Coolen, Sjoerd van Tuijl, Gustav J. Strijkers, Pim van Ooij, Eva S. Peper, R. Nils Planken, Henk A. Marquering, Alberto Maria Leopaldi, Arend de Weger, Graduate School, Radiology and Nuclear Medicine, ACS - Atherosclerosis & ischemic syndromes, ACS - Diabetes & metabolism, AMS - Restoration & Development, AMS - Sports & Work, ANS - Brain Imaging, Biomedical Engineering and Physics, CCA - Imaging and biomarkers, ACS - Heart failure & arrhythmias, Cardiology, ACS - Pulmonary hypertension & thrombosis, APH - Aging & Later Life, and Cardiovascular Biomechanics
- Subjects
Isolated Heart Preparation ,lcsh:Medical physics. Medical radiology. Nuclear medicine ,Cardiac output ,medicine.medical_specialty ,Swine ,lcsh:R895-920 ,Regurgitation (circulation) ,In Vitro Techniques ,030204 cardiovascular system & hematology ,Intracardiac injection ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,0302 clinical medicine ,Cardiac magnetic resonance imaging ,Internal medicine ,medicine ,Isolated heart preparation ,Animals ,Radiology, Nuclear Medicine and imaging ,medicine.diagnostic_test ,business.industry ,Heart valve diseases ,Heart ,Blood flow ,Stroke volume ,Transcatheter aortic valve replacement ,Coronary Vessels ,Magnetic Resonance Imaging ,Magnetic resonance imaging (4D flow) ,Cardiac Imaging Techniques ,medicine.anatomical_structure ,Regional Blood Flow ,Ventricle ,Cardiology ,cardiovascular system ,Feasibility Studies ,Original Article ,business - Abstract
Background Cardiac magnetic resonance imaging (MRI) in large animals is cumbersome for various reasons, including ethical considerations, costs of housing and maintenance, and need for anaesthesia. Our primary purpose was to show the feasibility of an isolated beating pig heart model for four-dimensional (4D) flow MRI for investigating intracardiac blood flow patterns and flow parameters using slaughterhouse side products. In addition, the feasibility of evaluating transcatheter aortic valve replacement (TAVR) in the model was investigated. Methods Seven slaughterhouse pig hearts were installed in the MRI-compatible isolated beating pig heart platform. First, Langendorff perfusion mode was established; then, the system switched to working mode, in which blood was actively pumped by the left ventricle. A pacemaker ensured a stable HR during 3-T MRI scanning. All hearts were submitted to human physiological conditions of cardiac output and stayed vital for several hours. Aortic flow was measured from which stroke volume, cardiac output, and regurgitation fraction were calculated. Results 4D flow MRI acquisitions were successfully conducted in all hearts. Stroke volume was 31 ± 6 mL (mean ± standard deviation), cardiac output 3.3 ± 0.9 L/min, and regurgitation fraction 16% ± 9%. With 4D flow, intracardiac and coronary flow patterns could be visualised in all hearts. In addition, we could study valve function and regurgitation in two hearts after TAVR. Conclusions The feasibility of 4D flow MRI in an isolated beating pig heart loaded to physiological conditions was demonstrated. The platform is promising for preclinical assessment of cardiac blood flow and function.
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- 2019
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34. An iterative sparse deconvolution method for simultaneous multicolor 19 F‐MRI of multiple contrast agents
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Mariah R R Daal, Zahi A. Fayad, Rob C. I. Wüst, Alexander Maier, Claudia Calcagno, Gustav J. Strijkers, Sonum Naidu, Willem J. M. Mulder, Bram F. Coolen, Jasper Schoormans, Abraham J. P. Teunissen, Aart J. Nederveen, Brenda L. Sanchez-Gaytan, Christopher Faries, AMS - Ageing and Morbidity, Precision Medicine, ICMS Core, Graduate School, ACS - Atherosclerosis & ischemic syndromes, ACS - Diabetes & metabolism, AMS - Restoration & Development, AMS - Sports & Work, ANS - Brain Imaging, Laboratory Genetic Metabolic Diseases, ACS - Heart failure & arrhythmias, AMS - Ageing & Morbidty, Radiology and Nuclear Medicine, CCA - Imaging and biomarkers, Medical Biochemistry, and Biomedical Engineering and Physics
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Male ,Scanner ,SDG 16 - Peace ,Materials science ,Full Papers—Preclinical and Clinical Imaging ,Contrast Media ,deconvolution ,Injections, Intramuscular ,Imaging phantom ,Spectral line ,030218 nuclear medicine & medical imaging ,Fluorine-19 Magnetic Resonance Imaging ,19F ,Mice ,03 medical and health sciences ,0302 clinical medicine ,sparse MRI ,Robustness (computer science) ,Crown Ethers ,Image Processing, Computer-Assisted ,Animals ,Computer Simulation ,Radiology, Nuclear Medicine and imaging ,compressed sensing ,Intravascular injection ,fluorine MRI ,Fluorocarbons ,Full Paper ,Phantoms, Imaging ,SDG 16 - Peace, Justice and Strong Institutions ,Fluorine ,F-19 ,Justice and Strong Institutions ,Hydrocarbons, Brominated ,multiplex ,Compressed sensing ,Liver ,Cell Tracking ,Nanoparticles ,Deconvolution ,Artifacts ,Biological system ,Algorithms ,Spleen ,multicolor ,030217 neurology & neurosurgery ,Preclinical imaging - Abstract
Purpose: 19F-MRI is gaining widespread interest for cell tracking and quantification of immune and inflammatory cells in vivo. Different fluorinated compounds can be discriminated based on their characteristic MR spectra, allowing in vivo imaging of multiple 19F compounds simultaneously, so-called multicolor 19F-MRI. We introduce a method for multicolor 19F-MRI using an iterative sparse deconvolution method to separate different 19F compounds and remove chemical shift artifacts arising from multiple resonances. Methods: The method employs cycling of the readout gradient direction to alternate the spatial orientation of the off-resonance chemical shift artifacts, which are subsequently removed by iterative sparse deconvolution. Noise robustness and separation was investigated by numerical simulations. Mixtures of fluorinated oils (PFCE and PFOB) were measured on a 7T MR scanner to identify the relation between 19F signal intensity and compound concentration. The method was validated in a mouse model after intramuscular injection of fluorine probes, as well as after intravascular injection. Results: Numerical simulations show efficient separation of 19F compounds, even at low signal-to-noise ratio. Reliable chemical shift artifact removal and separation of PFCE and PFOB signals was achieved in phantoms and in vivo. Signal intensities correlated excellently to the relative 19F compound concentrations (r−2 = 0.966/0.990 for PFOB/PFCE). Conclusions: The method requires minimal sequence adaptation and is therefore easily implemented on different MRI systems. Simulations, phantom experiments, and in-vivo measurements in mice showed effective separation and removal of chemical shift artifacts below noise level. We foresee applicability for simultaneous in-vivo imaging of 19F-containing fluorine probes or for detection of 19F-labeled cell populations.
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- 2019
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35. Emerging Magnetic Resonance Imaging Techniques for Atherosclerosis Imaging
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Aart J. Nederveen, Rob C. I. Wüst, Mariah R R Daal, Bram F. Coolen, Claudia Calcagno, Gustav J. Strijkers, and AMS - Ageing and Morbidity
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SDG 16 - Peace ,Population ,030204 cardiovascular system & hematology ,030218 nuclear medicine & medical imaging ,Unmet needs ,Disease activity ,03 medical and health sciences ,0302 clinical medicine ,medicine ,education ,education.field_of_study ,medicine.diagnostic_test ,business.industry ,SDG 16 - Peace, Justice and Strong Institutions ,Magnetic resonance imaging ,equipment and supplies ,Justice and Strong Institutions ,Atherosclerosis imaging ,Treatment evaluation ,Cardiology and Cardiovascular Medicine ,business ,human activities ,Plaque inflammation ,Biomedical engineering - Abstract
Atherosclerosis is a prevalent disease affecting a large portion of the population at one point in their lives. There is an unmet need for noninvasive diagnostics to identify and characterize at-risk plaque phenotypes noninvasively and in vivo, to improve the stratification of patients with cardiovascular disease, and for treatment evaluation. Magnetic resonance imaging is uniquely positioned to address these diagnostic needs. However, currently available magnetic resonance imaging methods for vessel wall imaging lack sufficient discriminative and predictive power to guide the individual patient needs. To address this challenge, physicists are pushing the boundaries of magnetic resonance atherosclerosis imaging to increase image resolution, provide improved quantitative evaluation of plaque constituents, and obtain readouts of disease activity such as inflammation. Here, we review some of these important developments, with specific focus on emerging applications using high-field magnetic resonance imaging, the use of quantitative relaxation parameter mapping for improved plaque characterization, and novel 19 F magnetic resonance imaging technology to image plaque inflammation.
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- 2019
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36. Emerging Magnetic Resonance Imaging Techniques for Atherosclerosis Imaging
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Rob C I, Wüst, Claudia, Calcagno, Mariah R R, Daal, Aart J, Nederveen, Bram F, Coolen, and Gustav J, Strijkers
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Image Interpretation, Computer-Assisted ,Contrast Media ,Humans ,Fluorine ,Atherosclerosis ,equipment and supplies ,Magnetic Resonance Imaging ,Sensitivity and Specificity ,human activities ,Magnetic Resonance Angiography ,Plaque, Atherosclerotic - Abstract
Atherosclerosis is a prevalent disease affecting a large portion of the population at one point in their lives. There is an unmet need for noninvasive diagnostics to identify and characterize at-risk plaque phenotypes noninvasively and in vivo, to improve the stratification of patients with cardiovascular disease, and for treatment evaluation. Magnetic resonance imaging is uniquely positioned to address these diagnostic needs. However, currently available magnetic resonance imaging methods for vessel wall imaging lack sufficient discriminative and predictive power to guide the individual patient needs. To address this challenge, physicists are pushing the boundaries of magnetic resonance atherosclerosis imaging to increase image resolution, provide improved quantitative evaluation of plaque constituents, and obtain readouts of disease activity such as inflammation. Here, we review some of these important developments, with specific focus on emerging applications using high-field magnetic resonance imaging, the use of quantitative relaxation parameter mapping for improved plaque characterization, and novel 19F magnetic resonance imaging technology to image plaque inflammation.
- Published
- 2019
- Full Text
- View/download PDF
37. Impairment of Cerebrovascular Hemodynamics in Patients With Severe and Milder Forms of Sickle Cell Disease
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John C. Wood, Bart J. Biemond, Liza Afzali-Hashemi, Matthias J.P. van Osch, Erfan Nur, Koen P. A. Baas, Anouk Schrantee, Stefan Manfred Spann, Bram F. Coolen, Aart J. Nederveen, Radiology and Nuclear Medicine, APH - Personalized Medicine, ANS - Compulsivity, Impulsivity & Attention, Biomedical Engineering and Physics, ACS - Atherosclerosis & ischemic syndromes, AMS - Amsterdam Movement Sciences, Clinical Haematology, ACS - Diabetes & metabolism, AMS - Ageing & Vitality, AMS - Sports, APH - Mental Health, and ACS - Heart failure & arrhythmias
- Subjects
congenital, hereditary, and neonatal diseases and abnormalities ,vascular reactivity ,medicine.medical_specialty ,arterial spin label (ASL) MRI ,Physiology ,Anemia ,cerebral blood flow ,Hemodynamics ,sickle cell anaemia ,Vasodilation ,hemodynamic abnormalities ,Disease ,cerebrovascular reactivity ,hemic and lymphatic diseases ,Physiology (medical) ,Internal medicine ,Fetal hemoglobin ,QP1-981 ,Medicine ,Original Research ,arterial transit time ,business.industry ,medicine.disease ,nervous system ,Cerebral blood flow ,Cardiology ,Hemoglobin ,business ,Acetazolamide ,medicine.drug - Abstract
In patients with sickle cell disease (SCD), cerebral blood flow (CBF) is elevated to counteract anemia and maintain oxygen supply to the brain. This may exhaust the vasodilating capacity of the vessels, possibly increasing the risk of silent cerebral infarctions (SCI). To further investigate cerebrovascular hemodynamics in SCD patients, we assessed CBF, arterial transit time (ATT), cerebrovascular reactivity of CBF and ATT (CVRCBF and CVRATT) and oxygen delivery in patients with different forms of SCD and matched healthy controls. We analyzed data of 52 patients with severe SCD (HbSS and HbSβ0-thal), 20 patients with mild SCD (HbSC and HbSβ+-thal) and 10 healthy matched controls (HbAA and HbAS). Time-encoded arterial spin labeling (ASL) scans were performed before and after a vasodilatory challenge using acetazolamide (ACZ). To identify predictors of CBF and ATT after vasodilation, regression analyses were performed. Oxygen delivery was calculated and associated with hemoglobin and fetal hemoglobin (HbF) levels. At baseline, severe SCD patients showed significantly higher CBF and lower ATT compared to both the mild SCD patients and healthy controls. As CBFpostACZ was linearly related to CBFpreACZ, CVRCBF decreased with disease severity. CVRATT was also significantly affected in severe SCD patients compared to mild SCD patients and healthy controls. Considering all groups, women showed higher CBFpostACZ than men (p < 0.01) independent of baseline CBF. Subsequently, post ACZ oxygen delivery was also higher in women (p < 0.05). Baseline, but not post ACZ, GM oxygen delivery increased with HbF levels. Our data showed that baseline CBF and ATT and CVRCBF and CVRATT are most affected in severe SCD patients and to a lesser extent in patients with milder forms of SCD compared to healthy controls. Cerebrovascular vasoreactivity was mainly determined by baseline CBF, sex and HbF levels. The higher vascular reactivity observed in women could be related to their lower SCI prevalence, which remains an area of future work. Beneficial effects of HbF on oxygen delivery reflect changes in oxygen dissociation affinity from hemoglobin and were limited to baseline conditions suggesting that high HbF levels do not protect the brain upon a hemodynamic challenge, despite its positive effect on hemolysis.
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- 2021
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38. Iron Oxide Nanoparticle Uptake in Mouse Brachiocephalic Artery Atherosclerotic Plaque Quantified by T2-Mapping MRI
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Judith C. Sluimer, Gustav J. Strijkers, Rik P. M. Moonen, Bram F. Coolen, Mat J.A.P. Daemen, MUMC+: DA BV Research (9), Pathologie, RS: Carim - B07 The vulnerable plaque: makers and markers, Biomedical Engineering and Physics, ACS - Atherosclerosis & ischemic syndromes, Amsterdam Movement Sciences, Pathology, Amsterdam Neuroscience - Neurovascular Disorders, ACS - Heart failure & arrhythmias, AMS - Musculoskeletal Health, and AMS - Sports
- Subjects
Iron oxide ,lcsh:RS1-441 ,Pharmaceutical Science ,Nanoparticle ,030204 cardiovascular system & hematology ,T2 mapping ,quantitative MRI ,Article ,030218 nuclear medicine & medical imaging ,lcsh:Pharmacy and materia medica ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Nuclear magnetic resonance ,In vivo ,medicine.artery ,medicine ,Brachiocephalic artery ,medicine.diagnostic_test ,Iron levels ,Magnetic resonance imaging ,Histology ,USPIO ,macrophages ,t-2 mapping ,chemistry ,inflammation ,atherosclerosis ,Ex vivo - Abstract
The purpose of our study was to monitor the iron oxide contrast agent uptake in mouse brachiocephalic artery (BCA) atherosclerotic plaques in vivo by quantitative T2-mapping magnetic resonance imaging (MRI). Female ApoE-/- mice (n = 32) on a 15-week Western-type diet developed advanced plaques in the BCA and were injected with ultra-small superparamagnetic iron oxides (USPIOs). Quantitative in vivo MRI at 9.4 T was performed with a Malcolm-Levitt (MLEV) prepared T2-mapping sequence to monitor the nanoparticle uptake in the atherosclerotic plaque. Ex vivo histology and particle electron paramagnetic resonance (pEPR) were used for validation. Longitudinal high-resolution in vivo T2-value maps were acquired with consistent quality. Average T2 values in the plaque decreased from a baseline value of 34.5 ± 0.6 ms to 24.0 ± 0.4 ms one day after injection and partially recovered to an average T2 of 27 ± 0.5 ms after two days. T2 values were inversely related to iron levels in the plaque as determined by ex vivo particle electron paramagnetic resonance (pEPR). We concluded that MRI T2 mapping facilitates a robust quantitative readout for USPIO uptake in atherosclerotic plaques in arteries near the mouse heart.
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- 2021
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39. Locally advanced rectal cancer: 3D diffusion-prepared stimulated-echo turbo spin-echo versus 2D diffusion-weighted echo-planar imaging
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Qinwei Zhang, Petra J. van Houdt, Uulke A. van der Heide, Baukelien van Triest, Doenja M. J. Lambregts, Marnix P. M. Kop, Gustav J. Strijkers, Aart J. Nederveen, Bram F. Coolen, Graduate School, ACS - Atherosclerosis & ischemic syndromes, ACS - Diabetes & metabolism, AMS - Restoration & Development, AMS - Sports & Work, Amsterdam Neuroscience - Brain Imaging, CCA - Imaging and biomarkers, Biomedical Engineering and Physics, Amsterdam Movement Sciences, ACS - Heart failure & arrhythmias, Radiology and Nuclear Medicine, and AMS - Sports
- Subjects
lcsh:Medical physics. Medical radiology. Nuclear medicine ,Adult ,Male ,Diffusion (acoustics) ,Colorectal cancer ,Image quality ,Diffusion magnetic resonance imaging ,lcsh:R895-920 ,animal diseases ,Rectum ,Rectal neoplasms ,Imaging, Three-Dimensional ,Magnetic resonance imaging ,medicine ,Humans ,Effective diffusion coefficient ,Radiology, Nuclear Medicine and imaging ,Aged ,Neuroradiology ,Aged, 80 and over ,medicine.diagnostic_test ,business.industry ,Echo-planar imaging ,Ultrasound ,Middle Aged ,medicine.disease ,medicine.anatomical_structure ,Neoplasm staging ,Female ,Original Article ,Nuclear medicine ,business - Abstract
Background Diffusion-weighted imaging (DWI) has shown great value in rectal cancer imaging. However, traditional DWI with echo-planar imaging (DW-EPI) often suffers from geometrical distortions. We applied a three-dimensional diffusion-prepared stimulated-echo turbo spin-echo sequence (DPsti-TSE), allowing geometrically undistorted rectal DWI. We compared DPsti-TSE with DW-EPI for locally advanced rectal cancer DWI. Methods For 33 prior-to-treatment patients, DWI images of the rectum were acquired with DPsti-TSE and DW-EPI at 3 T using b-values of 200 and 1000 s/mm2. Two radiologists conducted a blinded scoring of the images considering nine aspects of image quality and anatomical quality. Tumour apparent diffusion coefficient (ADC) and distortions were compared quantitatively. Results DPsti-TSE scored significantly better than DW-EPI in rectum distortion (p = 0.005) and signal pileup (p = 0.001). DPsti-TSE had better tumour Dice similarity coefficient compared to DW-EPI (0.84 versus 0.80, p = 0.010). Tumour ADC values were higher for DPsti-TSE compared to DW-EPI (1.47 versus 0.86 × 10-3 mm2/s, p < 0.001). Radiologists scored DPsti-TSE significantly lower than DW-EPI on aspects of overall image quality (p = 0.001), sharpness (p < 0.001), quality of fat suppression (p < 0.001), tumour visibility (p = 0.009), tumour conspicuity (p = 0.010) and rectum wall visibility (p = 0.005). Conclusions DPsti-TSE provided geometrically less distorted rectal cancer diffusion-weighted images. However, the image quality of DW-EPI over DPsti-TSE was referred on the basis of several image quality criteria. A significant bias in tumour ADC values from DPsti-TSE was present. Further improvements of DPsti-TSE are needed until it can replace DW-EPI.
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- 2020
40. Hymenophore configuration of the oak mazegill (
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Bjarke, Jensen, Bram F, Coolen, and Theodoor H, Smit
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Quercus ,Denmark ,Genetic Variation ,Fruiting Bodies, Fungal ,Polyporales ,Phylogeny - Abstract
The complex hymenophore configuration of the oak mazegill (
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- 2020
41. Altered brain fluid management in a rat model of arterial hypertension
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Ed VanBavel, Judith de Vos, Daphne M. P. Naessens, Erik N. T. P. Bakker, Bram F. Coolen, Gustav J. Strijkers, Biomedical Engineering and Physics, Graduate School, ACS - Microcirculation, Amsterdam Neuroscience - Neurovascular Disorders, Amsterdam Movement Sciences, ACS - Atherosclerosis & ischemic syndromes, AMS - Sports, and ACS - Heart failure & arrhythmias
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Male ,0301 basic medicine ,Pathology ,medicine.medical_specialty ,Rats, Inbred WKY ,lcsh:RC346-429 ,Cerebral Ventricles ,Corpus Callosum ,03 medical and health sciences ,Cellular and Molecular Neuroscience ,0302 clinical medicine ,Cerebrospinal fluid ,Body Water ,Developmental Neuroscience ,Interstitial fluid ,Rats, Inbred SHR ,medicine ,Animals ,Homeostasis ,Effective diffusion coefficient ,Cerebral oedema ,Arterial Pressure ,Endothelial dysfunction ,lcsh:Neurology. Diseases of the nervous system ,Aquaporin 4 ,Water transport ,medicine.diagnostic_test ,business.industry ,Research ,Brain ,Magnetic resonance imaging ,General Medicine ,medicine.disease ,Magnetic Resonance Imaging ,Rats ,030104 developmental biology ,Neurology ,Brain size ,Hypertension ,business ,030217 neurology & neurosurgery - Abstract
Background Proper neuronal function is directly dependent on the composition, turnover, and amount of interstitial fluid that bathes the cells. Most of the interstitial fluid is likely to be derived from ion and water transport across the brain capillary endothelium, a process that may be altered in hypertension due to vascular pathologies as endothelial dysfunction and arterial remodelling. In the current study, we investigated the effects of hypertension on the brain for differences in the water homeostasis. Methods Magnetic resonance imaging (MRI) was performed on a 7T small animal MRI system on male spontaneously hypertensive rats (SHR) and normotensive Wistar Kyoto rats (WKY) of 10 months of age. The MRI protocol consisted of T2-weighted scans followed by quantitative apparent diffusion coefficient (ADC) mapping to measure volumes of different anatomical structures and water diffusion respectively. After MRI, we assessed the spatial distribution of aquaporin 4 expression around blood vessels. Results MRI analysis revealed a significant reduction in overall brain volume and remarkably higher cerebroventricular volume in SHR compared to WKY. Whole brain ADC, as well as ADC values of a number of specific anatomical structures, were significantly lower in hypertensive animals. Additionally, SHR exhibited higher brain parenchymal water content. Immunohistochemical analysis showed a profound expression of aquaporin 4 around blood vessels in both groups, with a significantly larger area of influence around arterioles. Evaluation of specific brain regions revealed a decrease in aquaporin 4 expression around capillaries in the corpus callosum of SHR. Conclusion These results indicate a shift in the brain water homeostasis of adult hypertensive rats.
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- 2020
42. Inside Cover Image
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Eva S. Peper, Gustav J. Strijkers, Aart J. Nederveen, Pim van Ooij, Qinwei Zhang, Bram F. Coolen, and Lukas M. Gottwald
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Molecular Medicine ,Radiology, Nuclear Medicine and imaging ,Cover (algebra) ,Spectroscopy ,Geology ,Remote sensing ,Image (mathematics) - Published
- 2020
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43. Ultra-high resolution, 3-dimensional magnetic resonance imaging of the atherosclerotic vessel wall at clinical 7T
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Priti Balchandani, Claudia Calcagno, Zahi A. Fayad, Gustav J. Strijkers, Alison Pruzan, Arthi Sridhar, Bei Zhang, Philip M. Robson, Venkatesh Mani, Tim Leiner, Hadrien A. Dyvorne, Willem J. M. Mulder, Martin J. Willemink, Seigo Ishino, Bram F. Coolen, Ilda Bander, Aart J. Nederveen, Biomedical Engineering and Physics, ACS - Atherosclerosis & ischemic syndromes, Amsterdam Movement Sciences, AMS - Musculoskeletal Health, AMS - Sports, ACS - Heart failure & arrhythmias, Radiology and Nuclear Medicine, AMS - Ageing & Vitality, ACS - Diabetes & metabolism, and Medical Biochemistry
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Male ,Fluorescence-lifetime imaging microscopy ,Image quality ,Vascular Permeability ,Vascular permeability ,Signal-To-Noise Ratio ,Vascular Medicine ,Diagnostic Radiology ,Medicine and Health Sciences ,Aorta, Abdominal ,Image resolution ,Aorta ,Mammals ,Multidisciplinary ,medicine.diagnostic_test ,Radiology and Imaging ,Eukaryota ,Animal Models ,Ultra high resolution ,Magnetic Resonance Imaging ,Plaque, Atherosclerotic ,Experimental Organism Systems ,Vertebrates ,Leporids ,Engineering and Technology ,Medicine ,Rabbits ,Anatomy ,Preclinical imaging ,Research Article ,Scanner ,Histology ,Materials science ,Imaging Techniques ,Science ,Diet, High-Fat ,Research and Analysis Methods ,Imaging, Three-Dimensional ,Diagnostic Medicine ,Fluorescence Imaging ,medicine ,Animals ,Humans ,Signal to Noise Ratio ,Organisms ,Reproducibility of Results ,Biology and Life Sciences ,Magnetic resonance imaging ,Atherosclerosis ,Disease Models, Animal ,Amniotes ,Signal Processing ,Animal Studies ,Cardiovascular Anatomy ,Feasibility Studies ,Blood Vessels ,Zoology ,Magnetic Resonance Angiography ,Biomedical engineering - Abstract
Accurate quantification and characterization of atherosclerotic plaques with MRI requires high spatial resolution acquisitions with excellent image quality. The intrinsically better signal-to-noise ratio (SNR) at high-field clinical 7T compared to the widely employed lower field strengths of 1.5 and 3T may yield significant improvements to vascular MRI. However, 7T atherosclerosis imaging also presents specific challenges, related to local transmit coils and B1 field inhomogeneities, which may overshadow these theoretical gains. We present the development and evaluation of 3D, black-blood, ultra-high resolution vascular MRI on clinical high-field 7T in comparison lower-field 3T. These protocols were applied for in vivo imaging of atherosclerotic rabbits, which are often used for development, testing, and validation of translatable cardiovascular MR protocols. Eight atherosclerotic New Zealand White rabbits were imaged on clinical 7T and 3T MRI scanners using 3D, isotropic, high (0.63 mm3) and ultra-high (0.43 mm3) spatial resolution, black-blood MR sequences with extensive spatial coverage. Following imaging, rabbits were sacrificed for validation using fluorescence imaging and histology. Image quality parameters such as SNR and contrast-to-noise ratio (CNR), as well as morphological and functional plaque measurements (plaque area and permeability) were evaluated at both field strengths. Using the same or comparable imaging parameters, SNR and CNR were in general higher at 7T compared to 3T, with a median (interquartiles) SNR gain of +40.3 (35.3–80.1)%, and a median CNR gain of +68.1 (38.5–95.2)%. Morphological and functional parameters, such as vessel wall area and permeability, were reliably acquired at 7T and correlated significantly with corresponding, widely validated 3T vessel wall MRI measurements. In conclusion, we successfully developed 3D, black-blood, ultra-high spatial resolution vessel wall MRI protocols on a 7T clinical scanner. 7T imaging was in general superior to 3T with respect to image quality, and comparable in terms of plaque area and permeability measurements.
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- 2020
44. Compressed sensing MRI with variable density averaging (CS-VDA) outperforms full sampling at low SNR
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Jasper Schoormans, Bram F. Coolen, Aart J. Nederveen, Anders C. Hansen, Gustav J. Strijkers, Amsterdam Neuroscience - Brain Imaging, Graduate School, ACS - Heart failure & arrhythmias, Biomedical Engineering and Physics, AMS - Sports & Work, AMS - Restoration & Development, ACS - Diabetes & metabolism, Radiology and Nuclear Medicine, ACS - Atherosclerosis & ischemic syndromes, and AMS - Sports
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Image quality ,Computer science ,FOS: Physical sciences ,Image processing ,Signal-To-Noise Ratio ,Imaging phantom ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,0302 clinical medicine ,Sampling (signal processing) ,FOS: Electrical engineering, electronic engineering, information engineering ,Image Processing, Computer-Assisted ,Humans ,Radiology, Nuclear Medicine and imaging ,Knee ,compressed sensing ,Retrospective Studies ,Radiological and Ultrasound Technology ,business.industry ,k-space ,Phantoms, Imaging ,Image and Video Processing (eess.IV) ,Brain ,Pattern recognition ,Electrical Engineering and Systems Science - Image and Video Processing ,Physics - Medical Physics ,Magnetic Resonance Imaging ,Compressed sensing ,Signal-to-noise ratio (imaging) ,Undersampling ,data sampling ,030220 oncology & carcinogenesis ,Medical Physics (physics.med-ph) ,Artificial intelligence ,business ,MRI - Abstract
We investigated whether a combination of k-space undersampling and variable density averaging enhances image quality for low-SNR MRI acquisitions. We implemented 3D Cartesian k-space prospective undersampling with a variable number of averages for each k-line. The performance of this compressed sensing with variable-density averaging (CS-VDA) method was evaluated in retrospective analysis of fully sampled phantom MRI measurements, as well as for prospectively accelerated in vivo 3D brain and knee MRI scans. Both phantom and in vivo results showed that acquisitions using the CS-VDA approach resulted in better image quality as compared to full sampling of k-space in the same scan time. Specifically, CS-VDA with a higher number of averages in the center of k-space resulted in the best image quality, apparent from increased anatomical detail with preserved soft-tissue contrast. This novel approach will facilitate improved image quality of inherently low SNR data, such as those with high-resolution or specific contrast-weightings with low SNR efficiency., 11 pages, 9 figures
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- 2019
45. Accelerated 4D phase contrast MRI in skeletal muscle contraction
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Bram F. Coolen, Martijn Froeling, Gustav J. Strijkers, Lukas M. Gottwald, Valentina Mazzoli, Pim van Ooij, Eva S. Peper, Aart J. Nederveen, Nico Verdonschot, André Sprengers, ACS - Atherosclerosis & ischemic syndromes, AMS - Restoration & Development, AMS - Sports & Work, Graduate School, ACS - Diabetes & metabolism, ANS - Brain Imaging, Radiology and Nuclear Medicine, Biomedical Engineering and Physics, and ACS - Heart failure & arrhythmias
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Male ,Future studies ,Muscle, Skeletal/diagnostic imaging ,Skeletal muscle contraction ,Phase contrast microscopy ,UT-Hybrid-D ,phase contrast ,030218 nuclear medicine & medical imaging ,law.invention ,Imaging ,Magnetic Resonance Imaging/methods ,Leg/diagnostic imaging ,03 medical and health sciences ,muscle contraction ,0302 clinical medicine ,Imaging, Three-Dimensional ,law ,Three-Dimensional/methods ,medicine ,Humans ,Skeletal/diagnostic imaging ,Radiology, Nuclear Medicine and imaging ,Muscle, Skeletal ,compressed sensing ,Physics ,Leg ,strain rate ,Strain rate ,Magnetic Resonance Imaging ,Reconstructive and regenerative medicine Radboud Institute for Health Sciences [Radboudumc 10] ,Compressed sensing ,Imaging, Three-Dimensional/methods ,Undersampling ,Muscle ,Female ,medicine.symptom ,Muscle architecture ,030217 neurology & neurosurgery ,skeletal muscles ,Algorithms ,Muscle contraction ,Biomedical engineering ,MRI ,Muscle Contraction/physiology - Abstract
Purpose: 3D time-resolved (4D) phase contrast MRI can be used to study muscle contraction. However, 3D coverage with sufficient spatiotemporal resolution can only be achieved by interleaved acquisitions during many repetitions of the motion task, resulting in long scan times. The aim of this study was to develop a compressed sensing accelerated 4D phase contrast MRI technique for quantification of velocities and strain rate of the muscles in the lower leg during active plantarflexion/dorsiflexion. Methods: Nine healthy volunteers were scanned during active dorsiflexion/plantarflexion task. For each volunteer, we acquired a reference scan, as well as 4 different accelerated scans (k-space undersampling factors: 3.14X, 4.09X, 4.89X, and 6.41X) obtained using Cartesian Poisson disk undersampling schemes. The data was reconstructed using a compressed sensing pipeline. For each scan, velocity and strain rate values were quantified in the gastrocnemius lateralis, gastrocnemius medialis, tibialis anterior, and soleus. Results: No significant differences in velocity values were observed as a function acceleration factor in the investigated muscles. The strain rate calculation resulted in one positive (s+) and one negative (s−) eigenvalue, whereas the third eigenvalue (s3) was consistently 0 for all the acquisitions. No significant differences were observed for the strain rate eigenvalues as a function of acceleration factor. Conclusions: Data undersampling combined with compressed sensing reconstruction allowed obtainment of time-resolved phase contrast acquisitions with 3D coverage and quantitative information comparable to the reference scan. The 3D sensitivity of the method can help in understanding the connection between muscle architecture and muscle function in future studies.
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- 2018
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46. Evaluation of ultrasmall superparamagnetic iron-oxide (USPIO) enhanced MRI with ferumoxytol to quantify arterial wall inflammation
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Kang H. Zheng, Aart J. Nederveen, Erik S.G. Stroes, Bram F. Coolen, Loek P. Smits, Feiko Tiessens, ANS - Brain Imaging, Vascular Medicine, Graduate School, ACS - Amsterdam Cardiovascular Sciences, Radiology and Nuclear Medicine, AMS - Amsterdam Movement Sciences, Biomedical Engineering and Physics, AGEM - Amsterdam Gastroenterology Endocrinology Metabolism, ACS - Diabetes & metabolism, ACS - Atherosclerosis & ischemic syndromes, and ACS - Heart failure & arrhythmias
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Male ,Pathology ,medicine.medical_specialty ,Time Factors ,Contrast Media ,Inflammation ,030204 cardiovascular system & hematology ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,0302 clinical medicine ,Fluorodeoxyglucose F18 ,Predictive Value of Tests ,Positron Emission Tomography Computed Tomography ,medicine ,Humans ,Carotid Stenosis ,Arterial wall ,Infusions, Intravenous ,Magnetite Nanoparticles ,Aged ,Arteritis ,PET-CT ,Ultrasmall superparamagnetic iron oxide ,business.industry ,Dextrans ,Middle Aged ,medicine.disease ,Ferrosoferric Oxide ,Plaque, Atherosclerotic ,Pathophysiology ,Ferumoxytol ,Stenosis ,Carotid Arteries ,Case-Control Studies ,Feasibility Studies ,Female ,Radiopharmaceuticals ,medicine.symptom ,Cardiology and Cardiovascular Medicine ,Nuclear medicine ,business ,Magnetic Resonance Angiography ,Plaque inflammation - Abstract
Background and aims: Inflammation in atherosclerotic plaques is an important determinant of plaque vulnerability, and can be detected non-invasively using ultra-small superparamagnetic iron-oxide (USPIO) enhanced MRI. The aims of the current study were: 1) to determine whether ferumoxytol can be used for USPIO-MRI of atherosclerotic plaques, 2) to establish a protocol for quantitative USPIO-MRI of carotid artery plaques using ferumoxytol, and 3) to study the relation between USPIO uptake and plaque burden and F-18-fluorodeoxyglucose (FDG) uptake (measured by F-18-FDG PET/CT scan) in atherosclerotic plaques. Methods: In 9 patients with carotid artery stenosis >30% and 4 healthy controls, quantitative R2* MRI scans of the carotid arteries were performed before and 72 h after USPIO administration (4 mg/kg ferumoxytol). USPIO uptake was assessed by quantifying the difference in R2* (DR2*) between baseline and post-USPIO scans. In addition to MRI, F-18-FDG PET/CT was performed on both carotid arteries. MR and PET/CT images were co-registered, and F-18-FDG uptake was quantified in all slices containing atherosclerotic plaque. Results: Infusion of ferumoxytol resulted in higher R2* values after 72 h in atherosclerotic plaques (DR2* 24.6 +/- 19.8 s(-1); p = 0.0003), but not in the healthy control vessel wall (DR2* 2.6 +/- 5.6 s(-1), p = 0.23). USPIO uptake in patients was higher in atherosclerotic plaques compared to the patient non-plaque vessel wall (DR2* of 24.6 +/- 19.8 vs. 7.5 +/- 9.3 s(-1), p = 0.004). No correlation was found between USPIO uptake and F-18-FDG uptake in atherosclerotic plaques (R-2 = 0.03, p = 0.55). Conclusions: Ferumoxytol is selectively taken up by atherosclerotic plaques and can thus be used for carotid USPIO-MRI. As USPIO and F-18-FDG uptake in atherosclerotic plaque do not correlate in this cohort, these agents may visualize different pathophysiological aspects of plaque inflammation. (C) 2017 Elsevier B.V. All rights reserved
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- 2017
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47. Investigations of Carotid Stenosis to Identify Vulnerable Atherosclerotic Plaque and Determine Individual Stroke Risk
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Hans Rolf Jäger, Paul J. Nederkoorn, Aad van der Lugt, Leo H. Bonati, Madieke I. Liem, Bram F. Coolen, Fiona Kennedy, Martin M. Brown, Aart J. Nederveen, and Radiology & Nuclear Medicine
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Male ,medicine.medical_specialty ,medicine.medical_treatment ,Carotid arteries ,030204 cardiovascular system & hematology ,Revascularization ,medicine.disease_cause ,Stroke risk ,03 medical and health sciences ,0302 clinical medicine ,Risk Factors ,Internal medicine ,Humans ,Medicine ,Carotid Stenosis ,In patient ,cardiovascular diseases ,Stroke ,Endarterectomy ,business.industry ,General Medicine ,medicine.disease ,Vulnerable plaque ,Plaque, Atherosclerotic ,Stenosis ,Cardiology ,Female ,Cardiology and Cardiovascular Medicine ,business ,030217 neurology & neurosurgery - Abstract
Selection of patients with atherosclerotic carotid stenosis for revascularization is mainly based on the degree of luminal narrowing of the carotid artery. However, identification of other features of plaque apart from the degree of stenosis could enable better selection for intervention if they are also associated with the occurrence of stroke. Before these risk factors can possibly play a role in treatment decisions, their prognostic value needs to be proven. The purpose of this narrative review is to summarize current knowledge regarding the risk factors for stroke in patients with carotid stenosis, how they can be determined, and to what extent they predict stroke, based on recent literature. References for this review were identified by searches of PubMed between 1995 and October, 2016 and references from relevant articles. For each topic in this review different relevant search terms were used. The main search terms were 'carotid stenosis', 'atherosclerosis', 'stroke risk', and 'vulnerable plaque'. Language was restricted to English. The final reference list was generated on the basis of relevance to the topics covered in this review.
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- 2017
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48. Pseudo-spiral sampling and compressed sensing reconstruction provides flexibility of temporal resolution in accelerated aortic 4D flow MRI: A comparison with k-t principal component analysis
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Aart J. Nederveen, Eva S. Peper, Pim van Ooij, Gustav J. Strijkers, Qinwei Zhang, Lukas M. Gottwald, Bram F. Coolen, Graduate School, ACS - Atherosclerosis & ischemic syndromes, ACS - Diabetes & metabolism, AMS - Restoration & Development, AMS - Sports & Work, ANS - Brain Imaging, AMS - Amsterdam Movement Sciences, Radiology and Nuclear Medicine, Biomedical Engineering and Physics, ACS - Heart failure & arrhythmias, and AMS - Sports
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Adult ,Male ,Materials science ,Time Factors ,Systole ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,0302 clinical medicine ,Sampling (signal processing) ,Humans ,Radiology, Nuclear Medicine and imaging ,Spectroscopy ,Spiral ,Aorta ,Research Articles ,compressed sensing ,Principal Component Analysis ,cardiovascular ,Blood flow ,Stroke volume ,Magnetic Resonance Imaging ,sampling strategies ,Flow (mathematics) ,Undersampling ,Temporal resolution ,flow quantitation ,Principal component analysis ,Molecular Medicine ,Female ,Stress, Mechanical ,030217 neurology & neurosurgery ,Biomedical engineering ,Research Article - Abstract
Introduction Time‐resolved three‐dimensional phase contrast MRI (4D flow) of aortic blood flow requires acceleration to reduce scan time. Two established techniques for highly accelerated 4D flow MRI are k‐t principal component analysis (k‐t PCA) and compressed sensing (CS), which employ either regular or random k‐space undersampling. The goal of this study was to gain insights into the quantitative differences between k‐t PCA‐ and CS‐derived aortic blood flow, especially for high temporal resolution CS 4D flow MRI. Methods The scan protocol consisted of both k‐t PCA and CS accelerated 4D flow MRI, as well as a 2D flow reference scan through the ascending aorta acquired in 15 subjects. 4D flow scans were accelerated with factor R = 8. For CS accelerated scans, we used a pseudo‐spiral Cartesian sampling scheme, which could additionally be reconstructed at higher temporal resolution, resulting in R = 13. 4D flow data were compared with the 2D flow scan in terms of flow, peak flow and stroke volume. A 3D peak systolic voxel‐wise velocity and wall shear stress (WSS) comparison between k‐t PCA and CS 4D flow was also performed. Results The mean difference in flow/peak flow/stroke volume between the 2D flow scan and the 4D flow CS with R = 8 and R = 13 was 4.2%/9.1%/3.0% and 5.3%/7.1%/1.9%, respectively, whereas for k‐t PCA with R = 8 the difference was 9.7%/25.8%/10.4%. In the voxel‐by‐voxel 4D flow comparison we found 13.6% and 3.5% lower velocity and WSS values of k‐t PCA compared with CS with R = 8, and 15.9% and 5.5% lower velocity and WSS values of k‐t PCA compared with CS with R = 13. Conclusion Pseudo‐spiral accelerated 4D flow acquisitions in combination with CS reconstruction provides a flexible choice of temporal resolution. We showed that our proposed strategy achieves better agreement in flow values with 2D reference scans compared with using k‐t PCA accelerated acquisitions., The goal of this study was to gain insights in the quantitative differences between compressed sensing and k‐t PCA‐derived aortic blood flow, especially for high temporal resolution compressed sensing 4D flow MRI. Random pseudo‐spiral sampling with compressed sensing reconstruction provides a more flexible choice of temporal resolution compared with regular sampling like k‐t PCA. We showed that our proposed strategy achieves better agreement in peak flow values with 2D reference scans compared with using k‐t PCA accelerated acquisitions.
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- 2019
49. Comparison of four MR carotid surface coils at 3T
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Sandra van den Berg, Qinwei Zhang, Aart J. Nederveen, Dennis W. J. Klomp, Gyula Kotek, Gustav J. Strijkers, Bram F. Coolen, Debra S. Rivera, Amsterdam Neuroscience - Brain Imaging, Graduate School, Biomedical Engineering and Physics, Radiology and Nuclear Medicine, ACS - Diabetes & metabolism, ACS - Atherosclerosis & ischemic syndromes, ACS - Heart failure & arrhythmias, Signal Processing Systems, Radiology & Nuclear Medicine, and Spinoza Centre for Neuroimaging
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Male ,Image quality ,Carotid Arteries/anatomy & histology ,Signal-To-Noise Ratio ,Phantoms ,030218 nuclear medicine & medical imaging ,Diagnostic Radiology ,Imaging ,0302 clinical medicine ,Mathematical and Statistical Techniques ,Medicine and Health Sciences ,Radiographic Image Enhancement/methods ,Penetration depth ,Non-U.S. Gov't ,Magnetic Resonance Imaging/instrumentation ,Multidisciplinary ,medicine.diagnostic_test ,Phantoms, Imaging ,Radiology and Imaging ,Physics ,Research Support, Non-U.S. Gov't ,Statistics ,Classical Mechanics ,Eukaryota ,Arteries ,Magnetic Resonance Imaging ,Healthy Volunteers ,Radiographic Image Enhancement ,Insects ,Carotid Arteries ,In Vivo Imaging ,Moths and Butterflies ,Physical Sciences ,cardiovascular system ,Engineering and Technology ,Medicine ,Female ,Anatomy ,Algorithms ,Research Article ,Adult ,Scanner ,Materials science ,Arthropoda ,Imaging Techniques ,Science ,Acceleration ,Research Support ,Research and Analysis Methods ,03 medical and health sciences ,Young Adult ,Diagnostic Medicine ,medicine ,Journal Article ,Image acquisition ,Animals ,Humans ,Comparative Study ,Statistical Methods ,Signal to Noise Ratio ,Analysis of Variance ,Organisms ,Biology and Life Sciences ,Magnetic resonance imaging ,Invertebrates ,Electromagnetic coil ,Signal Processing ,Cardiovascular Anatomy ,Blood Vessels ,Parallel imaging ,030217 neurology & neurosurgery ,Mathematics ,Radiofrequency coil ,Biomedical engineering - Abstract
Background The quality of carotid wall MRI can benefit substantially from a dedicated RF coil that is tailored towards the human neck geometry and optimized for image signal-to-noise ratio (SNR), parallel imaging performance and RF penetration depth and coverage. In last decades, several of such dedicated carotid coils were introduced. However, a comparison of the more successful designs is still lacking. Objective To perform a head-to-head comparison over four dedicated MR carotid surface coils with 4, 6, 8 and 30 coil elements, respectively. Material and methods Ten volunteers were scanned on a 3T scanner. For each subject, multiple black-blood carotid vessel wall images were measured using the four coils with different parallel imaging settings. The performance of the coils was evaluated and compared in terms of image coverage, penetration depth and noise correlations between elements. Vessel wall of a common carotid section was delineated manually. Subsequently, images were assessed based on vessel wall morphology and image quality parameters. The morphological parameters consisted of the vessel wall area, thickness, and normalized wall index (wall area/total vessel area). Image quality parameters consisted of vessel wall SNR, wall-lumen contrast-to-noise ratio (CNR), the vessel g-factor, and CNR index ((wall–lumen signal) / (wall+lumen signal)). Repeated measures analysis of variance (rmANOVA) was applied for each parameter for the averaged 10 slices for all volunteers to assess effect of coil and SENSE factor. If the rmANOVA was significant, post-hoc comparisons were conducted. Results No significant coil effect were found for vessel wall morphological parameters. SENSE acceleration affected some morphological parameters for 6- and 8-channel coils, but had no effect on the 30-channel coil. The 30-channel coil achieved high acceleration factors (10x) with significantly lower vessel g-factor values (ps 0.01), but lower vessel wall SNR and CNR values (ps 0.01). Conclusion All four coils were capable of high-quality carotid MRI. The 30-channel coil is recommended when rapid image acquisition acceleration is required for 3D measurements, whereas 6- and 8-channel coils demonstrated the highest SNR performance.
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- 2019
50. Evaluation of compressed sensing MRI for accelerated bowel motility imaging
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Abdallah G. Motaal, Eva S. Peper, Aart J. Nederveen, Gustav J. Strijkers, C. S. de Jonge, Bram F. Coolen, C. Y. Nio, Jaap Stoker, I. Somers, AGEM - Endocrinology, metabolism and nutrition, AGEM - Digestive immunity, Radiology and Nuclear Medicine, Graduate School, ACS - Atherosclerosis & ischemic syndromes, Biomedical Engineering and Physics, ANS - Brain Imaging, ACS - Heart failure & arrhythmias, and ACS - Diabetes & metabolism
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lcsh:Medical physics. Medical radiology. Nuclear medicine ,Image quality ,lcsh:R895-920 ,Dynamic imaging ,Bowel motility ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,Magnetic resonance imaging ,0302 clinical medicine ,Abdomen ,medicine ,Radiology, Nuclear Medicine and imaging ,Neuroradiology ,Gastrointestinal motility ,medicine.diagnostic_test ,business.industry ,Ultrasound ,Magnetic resonance imaging (Cine) ,Intestine (small) ,Compressed sensing ,Original Article ,030211 gastroenterology & hepatology ,Parallel imaging ,Artifacts ,business ,Nuclear medicine - Abstract
Background To investigate the feasibility of compressed sensing and parallel imaging (CS-PI)-accelerated bowel motility magnetic resonance imaging (MRI) and to compare its image quality and diagnostic quality to conventional sensitivity encoding (SENSE) accelerated scans. Methods Bowel MRI was performed in six volunteers using a three-dimensional balanced fast field-echo sequence. Static scans were performed after the administration of a spasmolytic agent to prevent bowel motion artefacts. Fully sampled reference scans and multiple prospectively 3× to 7× undersampled CS-PI and SENSE scans were acquired. Additionally, fully sampled CS-PI and SENSE scans were retrospectively undersampled and reconstructed. Dynamic scans were performed using 5× to 7× accelerated scans in the presence of bowel motion. Retrospectively, undersampled scans were compared to fully sampled scans using structural similarity indices. All reconstructions were visually assessed for image quality and diagnostic quality by two radiologists. Results For static imaging, the performance of CS-PI was lower than that of fully sampled and SENSE scans: the diagnostic quality was assessed as adequate or good for 100% of fully sampled scans, 95% of SENSE, but only for 55% of CS-PI scans. For dynamic imaging, CS-PI image quality was scored similar to SENSE at high acceleration. Diagnostic quality of all scans was scored as adequate or good; 55% of CS-PI and 83% of SENSE scans were scored as good. Conclusion Compared to SENSE, current implementation of CS-PI performed less or equally good in terms of image quality and diagnostic quality. CS-PI did not show advantages over SENSE for three-dimensional bowel motility imaging.
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- 2019
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