1. Analysis of gene expression and histone modification between C and non-C homologous genes of PPDK and PCK in maize.
- Author
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Dong, Xiu-mei, Li, Yuan, Chao, Qing, Shen, Jie, Gong, Xiu-jie, Zhao, Biligen-gaowa, and Wang, Bai-chen
- Abstract
More efficient photosynthesis has allowed C plants to adapt to more diverse ecosystems (such as hot and arid conditions) than C plants. To better understand C photosynthesis, we investigated the expression patterns of C genes ( C4PPDK and PCK1) and their non-C homologous genes ( CyPPDK1, CyPPDK2, and PCK2) in the different organs of maize ( Zea mays). Both C genes and non-C genes showed organ-dependent expression patterns. The mRNA levels of C genes were more abundant in leaf organ than in seeds at 25 days after pollination (DAP), while non-C genes were mainly expressed in developing seeds. Further, acetylation of histone H3 lysine 9 (H3K9ac) positively correlates with mRNA levels of C genes ( C4PPDK and PCK1) in roots, stems, leaves, and seeds at 25 DAP, acetylation of histone H4 lysine 5 (H4K5ac) in the promoter regions of both C ( C4PPDK and PCK1) and non-C genes ( CyPPDK1, CyPPDK2, and PCK2) correlated well with their transcripts abundance in stems. In photosynthetic organs (stems and leaves), dimethylation of histone H3 lysine 9 (H3K9me2) negatively correlated with mRNA levels of both C and non-C genes. Taken together, our data suggest that histone modification was involved in the transcription regulation of both C genes and non-C genes, which might provide a clue of the functional evolution of C genes. [ABSTRACT FROM AUTHOR]
- Published
- 2016
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