1. Deep metabolic phenotyping of humans with protein-altering variants in TM6SF2 using a genome-first approach
- Author
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Helen Ye Rim Huang, Cecilia Vitali, David Zhang, Nicholas J. Hand, Michael C. Phillips, Kate Townsend Creasy, Eleonora Scorletti, Joseph Park, Regeneron Centre, Kai Markus Schneider, Daniel J. Rader, and Carolin Victoria Schneider
- Subjects
TM6SF2 ,MASLD ,MASH ,HCC ,Lipid metabolism ,Genome-first ,Diseases of the digestive system. Gastroenterology ,RC799-869 - Abstract
Background & Aim: An unbiased genome-first approach can expand the molecular understanding of specific genes in disease-agnostic biobanks for deeper phenotyping. TM6SF2 represents a good candidate for this approach due to its known association with steatotic liver disease (SLD). Methods: We screened participants with whole-exome sequences in the Penn Medicine Biobank (PMBB, n >40,000) and the UK Biobank (UKB, n >200,000) for protein-altering variants in TM6SF2 and evaluated their association with liver phenotypes and clinical outcomes. Results: Missense variants in TM6SF2 (E167K, L156P, P216L) were associated with an increased risk of clinically diagnosed and imaging-proven steatosis, independent of the PNPLA3 I48M risk allele and hepatitis B/C (p
- Published
- 2025
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