1. Parallel pattern of differentiation at a genomic island shared between clinal and mosaic hybrid zones in a complex of cryptic seahorse lineages
- Author
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Florentine Riquet, Philippe Aublanc, Cathy Liautard-Haag, Bojan Hamer, Khalid Belkhir, Sophie Arnaud-Haond, Patrick Louisy, Tahani El Ayari, Pierre-Alexandre Gagnaire, Lucy C. Woodall, Carmen Bouza, Olivier Briard, Vickie Beduneau, Nicolas Bierne, Francisco Otero-Ferrer, Sandra Hochscheid, Institut des Sciences de l'Evolution de Montpellier (UMR ISEM), École pratique des hautes études (EPHE), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Université de Montpellier (UM)-Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Centre National de la Recherche Scientifique (CNRS)-Institut de recherche pour le développement [IRD] : UR226, University of Oxford [Oxford], The Natural History Museum [London] (NHM), Universidade de Santiago de Compostela [Spain] (USC ), Ecosystèmes Côtiers Marins et Réponses aux Stress (ECOMERS), Université Nice Sophia Antipolis (... - 2019) (UNS), COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-Université Côte d'Azur (UCA), Center for Marine and Environmental Research 'Ruðer Bošković' Institute, Universidad de Las Palmas de Gran Canaria, University of Las Palmas de Gran Canaria (ULPGC), Institut Océanographique Paul Ricard, Océarium du Croisic, Aquarium de Biarritz, Stazione Zoologica Anton Dohrn (SZN), MARine Biodiversity Exploitation and Conservation (UMR MARBEC), Centre National de la Recherche Scientifique (CNRS)-Université de Montpellier (UM)-Institut Français de Recherche pour l'Exploitation de la Mer (IFREMER)-Institut de Recherche pour le Développement (IRD), Universidad de las Palmas de Gran Canaria (ULPGC), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-École Pratique des Hautes Études (EPHE), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Université de Montpellier (UM)-Institut de recherche pour le développement [IRD] : UR226-Centre National de la Recherche Scientifique (CNRS), University of Oxford, Université Nice Sophia Antipolis (1965 - 2019) (UNS), Institut de Recherche pour le Développement (IRD)-Institut Français de Recherche pour l'Exploitation de la Mer (IFREMER)-Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-École pratique des hautes études (EPHE)-Université de Montpellier (UM)-Institut de recherche pour le développement [IRD] : UR226-Centre National de la Recherche Scientifique (CNRS), and Université Côte d'Azur (UCA)-Université Côte d'Azur (UCA)
- Subjects
Gene Flow ,0301 basic medicine ,0106 biological sciences ,Sympatry ,parallel evolution ,reproductive isolation ,Introgression ,Parapatric speciation ,Clinal hybrid zone ,010603 evolutionary biology ,01 natural sciences ,Ecological speciation ,03 medical and health sciences ,Genomic island ,Genetics ,ecological speciation ,Animals ,14. Life underwater ,ComputingMilieux_MISCELLANEOUS ,Ecology, Evolution, Behavior and Systematics ,030304 developmental biology ,Local adaptation ,0303 health sciences ,Panmixia ,Genome ,[SDV.GEN.GPO]Life Sciences [q-bio]/Genetics/Populations and Evolution [q-bio.PE] ,biology ,mosaic hybrid zone ,[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE] ,Reproductive isolation ,biology.organism_classification ,Biological Evolution ,Smegmamorpha ,Europe ,030104 developmental biology ,Evolutionary biology ,local adaptation ,Hybridization, Genetic ,Hippocampus guttulatus ,Parallel evolution ,[SDE.BE]Environmental Sciences/Biodiversity and Ecology ,General Agricultural and Biological Sciences - Abstract
This preprint has been peer-reviewed and recommended by Peer Community in Evolutionary Biology (PCI Evol Biol, doi: 10.24072/pci.evolbiol.100056). Diverging semi-isolated lineages either meet in narrow clinal hybrid zones, or have a mosaic distribution associated with environmental variation. Intrinsic reproductive isolation is often emphasized in the former and local adaptation in the latter, although both can contribute to isolation. Rarely these two patterns of spatial distribution are reported in the same study system. Here we report that the long-snouted seahorse Hippocampus guttulatus is subdivided into discrete panmictic entities by both types of hybrid zones. Along the European Atlantic coasts, a northern and a southern lineage meet in the southwest of France where they coexist in sympatry with little hybridization. In the Mediterranean Sea, two lineages have a mosaic distribution, associated with lagoon-like and marine habitats. A fifth lineage was identified in the Black Sea. Genetic homogeneity over large spatial scales contrasts with isolation maintained in sympatry or close parapatry at a fine scale. A high variation in locus-specific introgression rates provides additional evidence that partial reproductive isolation must be maintaining the divergence. Surprisingly, fixed differences between lagoon and marine populations in the Mediterranean Sea belong to the most differentiated SNPs between the two Atlantic lineages, against the genome-wide pattern of structure. These parallel outlier SNPs cluster on a single chromosome-wide island of differentiation. Since Atlantic lineages do not match the lagoon-sea habitat variation, genetic parallelism at the genomic island suggests a shared genetic barrier contributes to reproductive isolation in contrasting contexts -i.e. spatial vs. ecological. We discuss how a genomic hotspot of parallel differentiation could have evolved and become associated either with space or with a patchy environment in a single study system.
- Published
- 2018
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