714 results on '"Chan, Jefferson"'
Search Results
2. A novel nonsense variant in the NFE2L1 transcription factor in a patient with developmental delay, hypotonia, genital anomalies, and failure to thrive
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Wang, Julia M, Ho, Daniel V, Kritzer, Amy, and Chan, Jefferson Y
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Biological Sciences ,Biomedical and Clinical Sciences ,Genetics ,2.1 Biological and endogenous factors ,Aetiology ,Failure to Thrive ,Gene Expression Regulation ,Genitalia ,Humans ,Male ,Muscle Hypotonia ,NF-E2-Related Factor 1 ,Transcription Factors ,NFE2L1 ,dominant negative ,global developmental delay ,nonsense variant ,transcription factor ,Clinical Sciences ,Genetics & Heredity ,Clinical sciences - Abstract
The NFE2L1 transcription factor (also known as Nrf1 for nuclear factor erythroid 2-related factor-1) is a broadly expressed basic leucine zipper protein that performs a critical role in the cellular stress response pathway. Here, we identified a heterozygous nonsense mutation located in the last exon of the gene that terminates translation prematurely, resulting in the production of a truncated peptide devoid of the carboxyl-terminal region containing the DNA-binding and leucine-zipper dimerization interface of the protein. Variant derivatives were well expressed in vitro, and they inhibited the transactivation function of wild-type proteins in luciferase reporter assays. Our studies suggest that this dominant-negative effect of truncated variants is through the formation of inactive heterodimers with wild-type proteins preventing the expression of its target genes. These findings suggest the potential role of diminished NFE2L1 function as an explanation for the developmental delay, hypotonia, hypospadias, bifid scrotum, and failure to thrive observed in the patient.
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- 2022
3. The Nrf1 transcription factor is induced by patulin and protects against patulin cytotoxicity.
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Han, John, Nguyen, Carolyn, Thrasher, Julianna, DeGuzman, Anna, and Chan, Jefferson
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Cellular stress ,Mycotoxin ,Nrf1 ,Protein homeostasis ,Transcription factor - Abstract
Patulin is a mycotoxin produced by a variety of molds that is found in various food products. The adverse health effects associated with exposure to patulin has led to many investigations into the biological basis driving the toxicity of patulin. Nevertheless, the mechanisms through which mammalian cells resists patulin-mediated toxicity is poorly understood. Here, we show that loss of the Nrf1 transcription factor renders cells sensitive to the acute cytotoxic effects of patulin. Nrf1 deficiency leads to accumulation of ubiquitinated proteins and protein aggregates in response to patulin exposure. Nrf1 expression is induced by patulin, and activation of proteasome genes by patulin is Nrf1-dependent. These findings suggest the Nrf1 transcription factor plays a crucial role in modulating cellular stress response against patulin cytotoxicity.
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- 2022
4. Functional Dyes
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Chan, Jefferson, speaker, Yang, Youjun, speaker, Fan, Jiangli, speaker, Chen, Zhixing, speaker, New, Elizabeth, speaker, Li, Ang, moderator, and Li, Lin, speaker
- Abstract
Functional dyes possess the ability to absorb light within the visible spectrum but are harnessed for their unique properties in their excited states, such as heat generation or light emission. Today, functional dyes represent a vibrant and evolving field of research, where scientists are continually exploring novel molecules capable of harnessing light energy for diverse functional applications.
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- 2023
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5. The deubiquitinating enzyme USP7 regulates the transcription factor Nrf1 by modulating its stability in response to toxic metal exposure
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Han, John JW, Ho, Daniel V, Kim, Hyun M, Lee, Jun Y, Jeon, Yerin S, and Chan, Jefferson Y
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Genetics ,Biotechnology ,Generic health relevance ,Animals ,Cell Line ,HCT116 Cells ,HEK293 Cells ,Humans ,Metals ,Mice ,NF-E2-Related Factor 1 ,Protein Interaction Maps ,Protein Stability ,Ubiquitin-Specific Peptidase 7 ,cellular stress ,deubiquitinase ,protein stability ,toxic metals ,transcription factor ,Chemical Sciences ,Biological Sciences ,Medical and Health Sciences ,Biochemistry & Molecular Biology - Abstract
The nuclear factor E2-related factor 1 (Nrf1) transcription factor performs a critical role in regulating cellular homeostasis as part of the cellular stress response and drives the expression of antioxidants and detoxification enzymes among many other functions. Ubiquitination plays an important role in controlling the abundance and thus nuclear accumulation of Nrf1 proteins, but the regulatory enzymes that act on Nrf1 are not fully defined. Here, we identified ubiquitin specific protease 7 (USP7), a deubiquitinating enzyme, as a novel regulator of Nrf1 activity. We found that USP7 interacts with Nrf1a and TCF11-the two long protein isoforms of Nrf1. Expression of wildtype USP7, but not its catalytically defective mutant, resulted in decreased ubiquitination of TCF11 and Nrf1a, leading to their increased stability and increased transactivation of reporter gene expression by TCF11 and Nrf1a. In contrast, knockdown or pharmacologic inhibition of USP7 dramatically increased ubiquitination of TCF11 and Nrf1a and reduction of their steady state levels. Loss of USP7 function attenuated the induction of Nrf1 protein expression in response to treatment with arsenic and other toxic metals, and inhibition of USP7 activity significantly sensitized cells to arsenic treatment. Collectively, these findings suggest that USP7 may act to modulate abundance of Nrf1 protein to induce gene expression in response to toxic metal exposure.
- Published
- 2021
6. Leveraging coordination chemistry to visualize metal ions via photoacoustic imaging
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Swartchick, Chelsea B. and Chan, Jefferson
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- 2023
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7. Activity-based bioluminescence probes for in vivo sensing applications
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Yadav, Anuj K. and Chan, Jefferson
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- 2023
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8. Acoustogenic Probes: A Demonstration to Introduce the Photoacoustic Effect 'via' Analyte Sensing
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Tapia Hernandez, Rodrigo, Forzano, Joseph A., Lucero, Melissa Y., Anorma, Chelsea, and Chan, Jefferson
- Abstract
Photoacoustic imaging is a state-of-the-art technique that combines light excitation with ultrasound generation "via" the photoacoustic effect. Since sound waves at clinically relevant frequencies undergo minimal perturbation as they pass through the body, photoacoustic imaging is ideal for deep-tissue imaging applications "in vivo." Despite its utility in the biomedical field, it is unlikely that undergraduate students will ever experience this technology firsthand in a classroom setting owing to the delicate and expensive nature of the instrumentation. Likewise, students will not be exposed to acoustogenic probes, which are specialized chemicals designed to detect biologically relevant analytes using photoacoustic imaging. With the goal of introducing new chemical analysis and imaging techniques to the undergraduate chemistry curricula, we present a simple and inexpensive setup (all materials were purchased for less than $48 USD) to demonstrate the photoacoustic effect through g.
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- 2021
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9. Activity-based photoacoustic probe for biopsy-free assessment of copper in murine models of Wilson’s disease and liver metastasis
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Lucero, Melissa Y., Tang, Yuqi, Zhang, Chloe J., Su, Shengzhang, Forzano, Joseph A., Garcia, Valeria, Huang, Xin, Moreno, David, and Chan, Jefferson
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- 2021
10. The Nrf1 transcription factor is induced by patulin and protects against patulin cytotoxicity
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Han, John J.W., Nguyen, Carolyn D., Thrasher, Julianna P., DeGuzman, Anna, and Chan, Jefferson Y.
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- 2022
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11. Copper regulates rest-activity cycles through the locus coeruleus-norepinephrine system.
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Xiao, Tong, Ackerman, Cheri M, Carroll, Elizabeth C, Jia, Shang, Hoagland, Adam, Chan, Jefferson, Thai, Bao, Liu, Christine S, Isacoff, Ehud Y, and Chang, Christopher J
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Locus Coeruleus ,Animals ,Zebrafish ,Copper ,Norepinephrine ,Biochemistry & Molecular Biology ,Medicinal and Biomolecular Chemistry ,Biochemistry and Cell Biology - Abstract
The unusually high demand for metals in the brain, along with insufficient understanding of how their dysregulation contributes to neurological diseases, motivates the study of how inorganic chemistry influences neural circuitry. We now report that the transition metal copper is essential for regulating rest-activity cycles and arousal. Copper imaging and gene expression analysis in zebrafish identifies the locus coeruleus-norepinephrine (LC-NE) system, a vertebrate-specific neuromodulatory circuit critical for regulating sleep, arousal, attention, memory and emotion, as a copper-enriched unit with high levels of copper transporters CTR1 and ATP7A and the copper enzyme dopamine β-hydroxylase (DBH) that produces NE. Copper deficiency induced by genetic disruption of ATP7A, which loads copper into DBH, lowers NE levels and hinders LC function as manifested by disruption in rest-activity modulation. Moreover, LC dysfunction caused by copper deficiency from ATP7A disruption can be rescued by restoring synaptic levels of NE, establishing a molecular CTR1-ATP7A-DBH-NE axis for copper-dependent LC function.
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- 2018
12. Photoacoustic imaging of elevated glutathione in models of lung cancer for companion diagnostic applications
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Lucero, Melissa Y. and Chan, Jefferson
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- 2021
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13. A PGAM5–KEAP1–Nrf2 complex is required for stress-induced mitochondrial retrograde trafficking
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O'Mealey, Gary B, Plafker, Kendra S, Berry, William L, Janknecht, Ralf, Chan, Jefferson Y, and Plafker, Scott M
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Biochemistry and Cell Biology ,Biological Sciences ,Neurodegenerative ,Underpinning research ,1.1 Normal biological development and functioning ,Generic health relevance ,Animals ,Biological Transport ,Female ,HEK293 Cells ,Humans ,Kelch-Like ECH-Associated Protein 1 ,Membrane Potential ,Mitochondrial ,Mice ,Inbred C57BL ,Microtubules ,Mitochondria ,Mitochondrial Dynamics ,Mitochondrial Proteins ,NF-E2-Related Factor 2 ,Oxidative Stress ,Phosphoprotein Phosphatases ,Protein Domains ,Proteolysis ,rho GTP-Binding Proteins ,Clustering ,Miro2 ,Nrf2 ,Proteasome ,Ubiquitin ,Medical and Health Sciences ,Developmental Biology ,Biochemistry and cell biology - Abstract
The Nrf2 transcription factor is a master regulator of the cellular anti-stress response. A population of the transcription factor associates with the mitochondria through a complex with KEAP1 and the mitochondrial outer membrane histidine phosphatase, PGAM5. To determine the function of this mitochondrial complex, we knocked down each component and assessed mitochondrial morphology and distribution. We discovered that depletion of Nrf2 or PGAM5, but not KEAP1, inhibits mitochondrial retrograde trafficking induced by proteasome inhibition. Mechanistically, this disrupted motility results from aberrant degradation of Miro2, a mitochondrial GTPase that links mitochondria to microtubules. Rescue experiments demonstrate that this Miro2 degradation involves the KEAP1-cullin-3 E3 ubiquitin ligase and the proteasome. These data are consistent with a model in which an intact complex of PGAM5-KEAP1-Nrf2 preserves mitochondrial motility by suppressing dominant-negative KEAP1 activity. These data further provide a mechanistic explanation for how age-dependent declines in Nrf2 expression impact mitochondrial motility and induce functional deficits commonly linked to neurodegeneration.
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- 2017
14. Nuclear factor-erythroid-2 related transcription factor-1 (Nrf1) is regulated by O-GlcNAc transferase.
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Han, Jeong Woo, Valdez, Joshua L, Ho, Daniel V, Lee, Candy S, Kim, Hyun Min, Wang, Xiaorong, Huang, Lan, and Chan, Jefferson Y
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Humans ,Oximes ,Phenylcarbamates ,N-Acetylglucosaminyltransferases ,Acetylglucosamine ,Recombinant Proteins ,Cloning ,Molecular ,Transfection ,Sequence Alignment ,Gene Expression ,Protein Processing ,Post-Translational ,Binding Sites ,Amino Acid Sequence ,Protein Binding ,Sequence Homology ,Amino Acid ,Glycosylation ,Plasmids ,Nuclear Respiratory Factor 1 ,Host Cell Factor C1 ,Protein Interaction Domains and Motifs ,Ubiquitination ,Transcriptional Activation ,Protein Stability ,HEK293 Cells ,Proteolysis ,O-GlcNAcylation ,OGT ,Oxidative stress ,Protein stability ,Transcription factor ,1.1 Normal biological development and functioning ,2.1 Biological and endogenous factors ,Generic health relevance ,Biochemistry & Molecular Biology ,Medicinal and Biomolecular Chemistry ,Biochemistry and Cell Biology ,Medical Biochemistry and Metabolomics - Abstract
The Nrf1 (Nuclear factor E2-related factor 1) transcription factor performs a critical role in regulating cellular homeostasis. Using a proteomic approach, we identified Host Cell Factor-1 (HCF1), a co-regulator of transcription, and O-GlcNAc transferase (OGT), the enzyme that mediates protein O-GlcNAcylation, as cellular partners of Nrf1a, an isoform of Nrf1. Nrf1a directly interacts with HCF1 through the HCF1 binding motif (HBM), while interaction with OGT is mediated through HCF1. Overexpression of HCF1 and OGT leads to increased Nrf1a protein stability. Addition of O-GlcNAc decreases ubiquitination and degradation of Nrf1a. Transcriptional activation by Nrf1a is increased by OGT overexpression and treatment with PUGNAc. Together, these data suggest that OGT can act as a regulator of Nrf1a.
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- 2017
15. The deubiquitinating enzyme USP7 regulates the transcription factor Nrf1 by modulating its stability in response to toxic metal exposure
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Han, John J.W., Ho, Daniel V., Kim, Hyun M., Lee, Jun Y., Jeon, Yerin S., and Chan, Jefferson Y.
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- 2021
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16. Acoustic-based chemical tools for profiling the tumor microenvironment
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Yadav, Anuj K., Hernandez, Selena, Su, Shengzhang, and Chan, Jefferson
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- 2020
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17. Copper regulates cyclic-AMP-dependent lipolysis
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Krishnamoorthy, Lakshmi, Cotruvo, Joseph A, Chan, Jefferson, Kaluarachchi, Harini, Muchenditsi, Abigael, Pendyala, Venkata S, Jia, Shang, Aron, Allegra T, Ackerman, Cheri M, Wal, Mark N Vander, Guan, Timothy, Smaga, Lukas P, Farhi, Samouil L, New, Elizabeth J, Lutsenko, Svetlana, and Chang, Christopher J
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Biochemistry and Cell Biology ,Biological Sciences ,3T3-L1 Cells ,Animals ,Copper ,Cyclic AMP ,Cyclic Nucleotide Phosphodiesterases ,Type 3 ,Dose-Response Relationship ,Drug ,Lipolysis ,Mice ,Molecular Structure ,Phosphodiesterase 3 Inhibitors ,Structure-Activity Relationship ,Medicinal and Biomolecular Chemistry ,Biochemistry & Molecular Biology ,Biochemistry and cell biology ,Medicinal and biomolecular chemistry - Abstract
Cell signaling relies extensively on dynamic pools of redox-inactive metal ions such as sodium, potassium, calcium and zinc, but their redox-active transition metal counterparts such as copper and iron have been studied primarily as static enzyme cofactors. Here we report that copper is an endogenous regulator of lipolysis, the breakdown of fat, which is an essential process in maintaining body weight and energy stores. Using a mouse model of genetic copper misregulation, in combination with pharmacological alterations in copper status and imaging studies in a 3T3-L1 white adipocyte model, we found that copper regulates lipolysis at the level of the second messenger, cyclic AMP (cAMP), by altering the activity of the cAMP-degrading phosphodiesterase PDE3B. Biochemical studies of the copper-PDE3B interaction establish copper-dependent inhibition of enzyme activity and identify a key conserved cysteine residue in a PDE3-specific loop that is essential for the observed copper-dependent lipolytic phenotype.
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- 2016
18. Nuclear Factor Erythroid-2 Like 1 (NFE2L1): Structure, function and regulation
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Kim, Hyun Min, Han, Jeong Woo, and Chan, Jefferson Y
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Biochemistry and Cell Biology ,Biological Sciences ,Genetics ,Rare Diseases ,Underpinning research ,2.1 Biological and endogenous factors ,1.1 Normal biological development and functioning ,Aetiology ,Generic health relevance ,Animals ,Gene Expression Regulation ,Homeostasis ,Humans ,NF-E2-Related Factor 1 ,Protein Conformation ,Antioxidant ,Antioxidant response element ,CNC-bZIP ,Cellular stress response ,Proteostasis ,Transcription factor ,proteasome regulation ,Physiology ,Medical Microbiology ,Developmental Biology ,Biochemistry and cell biology ,Bioinformatics and computational biology - Abstract
Nrf1 (also referred to as NFE2L1) is a member of the CNC-bZIP family of transcription factors that are characterized by a highly conserved CNC-domain, and a basic-leucine zipper domain required for dimerization and DNA binding. Nrf1 is ubiquitously expressed across tissue and cell types as various isoforms, and is induced by stress signals from a broad spectrum of stimuli. Evidence indicates that Nrf1 plays an important role in regulating a range of cellular functions including oxidative stress response, differentiation, inflammatory response, metabolism, and maintaining proteostasis. Thus, Nrf1 has been implicated in the pathogenesis of various disease processes including cancer development, and degenerative and metabolic disorders. This review summarizes our current understanding of Nrf1 and the molecular mechanism underlying its regulation and action in different cellular functions.
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- 2016
19. Increased Energy Expenditure, Ucp1 Expression, and Resistance to Diet-induced Obesity in Mice Lacking Nuclear Factor-Erythroid-2-related Transcription Factor-2 (Nrf2)*
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Schneider, Kevin, Valdez, Joshua, Nguyen, Janice, Vawter, Marquis, Galke, Brandi, Kurtz, Theodore W, and Chan, Jefferson Y
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Biochemistry and Cell Biology ,Biomedical and Clinical Sciences ,Biological Sciences ,Genetics ,Obesity ,Diabetes ,Nutrition ,2.1 Biological and endogenous factors ,Aetiology ,Cancer ,Metabolic and endocrine ,Oral and gastrointestinal ,Stroke ,Cardiovascular ,Adipogenesis ,Animals ,Diet ,Fibroblasts ,Free Radical Scavengers ,Gene Expression Regulation ,Ion Channels ,Mice ,Mice ,Knockout ,Mitochondrial Proteins ,NF-E2-Related Factor 2 ,Oxidative Stress ,Oxygen Consumption ,Uncoupling Protein 1 ,adipose tissue ,antioxidant ,oxidative stress ,reactive oxygen species ,uncoupling protein ,Chemical Sciences ,Medical and Health Sciences ,Biochemistry & Molecular Biology ,Biological sciences ,Biomedical and clinical sciences ,Chemical sciences - Abstract
The NRF2 (also known as NFE2L2) transcription factor is a critical regulator of genes involved in defense against oxidative stress. Previous studies suggest thatNrf2plays a role in adipogenesisin vitro, and deletion of theNrf2gene protects against diet-induced obesity in mice. Here, we demonstrate that resistance to diet-induced obesity inNrf2(-/-)mice is associated with a 20-30% increase in energy expenditure. Analysis of bioenergetics revealed thatNrf2(-/-)white adipose tissues exhibit greater oxygen consumption. White adipose tissue showed a >2-fold increase inUcp1gene expression. Oxygen consumption is also increased nearly 2.5-fold inNrf2-deficient fibroblasts. Oxidative stress induced by glucose oxidase resulted in increasedUcp1expression. Conversely, antioxidant chemicals (such asN-acetylcysteine and Mn(III)tetrakis(4-benzoic acid)porphyrin chloride) and SB203580 (a known suppressor ofUcp1expression) decreasedUcp1and oxygen consumption inNrf2-deficient fibroblasts. These findings suggest that increasing oxidative stress by limitingNrf2function in white adipocytes may be a novel means to modulate energy balance as a treatment of obesity and related clinical disorders.
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- 2016
20. Effects of deletion of the transcription factor Nrf2 and benzo [a]pyrene treatment on ovarian follicles and ovarian surface epithelial cells in mice
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Lim, Jinhwan, Ortiz, Laura, Nakamura, Brooke N, Hoang, Yvonne D, Banuelos, Jesus, Flores, Victoria N, Chan, Jefferson Y, and Luderer, Ulrike
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Reproductive Medicine ,Biomedical and Clinical Sciences ,Genetics ,Aging ,Endocrine Disruptors ,1.1 Normal biological development and functioning ,Generic health relevance ,Animals ,Antioxidants ,Apoptosis ,Benzo(a)pyrene ,Cell Proliferation ,Cellular Senescence ,DNA Adducts ,Dose-Response Relationship ,Drug ,Environmental Pollutants ,Epithelial Cells ,Female ,Gene Deletion ,Genotype ,Mice ,Inbred C57BL ,Mice ,Knockout ,NF-E2-Related Factor 2 ,Ovarian Follicle ,Ovarian Reserve ,Ovary ,Oxidative Stress ,Phenotype ,NRF2 ,Ovarian aging ,Benzo[a]pyrene ,Oxidative stress ,Polycyclic aromatic hydrocarbon ,DNA adduct ,Paediatrics and Reproductive Medicine ,Pharmacology and Pharmaceutical Sciences ,Public Health and Health Services ,Toxicology ,Pharmacology and pharmaceutical sciences ,Reproductive medicine - Abstract
Polycyclic aromatic hydrocarbons, like benzo[a]pyrene (BaP), are ubiquitous environmental pollutants and potent ovarian toxicants. The transcription factor NRF2 is an important regulator of the cellular response to electrophilic toxicants like BaP and to oxidative stress. NRF2 regulates transcription of genes involved in the detoxification of reactive metabolites of BaP and reactive oxygen species. We therefore hypothesized that Nrf2-/- mice have accelerated ovarian aging and increased sensitivity to the ovarian toxicity of BaP. A single injection of BaP dose-dependently depleted ovarian follicles in Nrf2+/+ and Nrf2-/- mice, but the effects of BaP were not enhanced in the absence of Nrf2. Similarly, Nrf2-/- mice did not have increased ovarian BaP DNA adduct formation compared to Nrf2+/+ mice. Ovarian follicle numbers did not differ between peripubertal Nrf2-/- and Nrf2+/+ mice, but by middle age, Nrf2-/- mice had significantly fewer primordial follicles than Nrf2+/+ mice, consistent with accelerated ovarian aging.
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- 2015
21. Role of Nrf2 dysfunction in uremia-associated intestinal inflammation and epithelial barrier disruption.
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Lau, Wei Ling, Liu, Shu-Man, Pahlevan, Sogol, Yuan, Jun, Khazaeli, Mahyar, Ni, Zhenmin, Chan, Jefferson Y, and Vaziri, Nosratola D
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Intestinal Mucosa ,Colon ,Tight Junctions ,Animals ,Rats ,Sprague-Dawley ,Colitis ,Uremia ,Disease Models ,Animal ,Oleanolic Acid ,Anti-Inflammatory Agents ,Inflammation Mediators ,Nephrectomy ,Case-Control Studies ,Signal Transduction ,Oxidative Stress ,Male ,NF-E2-Related Factor 2 ,Renal Insufficiency ,Chronic ,Tight Junction Proteins ,Biomarkers ,Autoimmune Disease ,Cancer ,Colo-Rectal Cancer ,Inflammatory Bowel Disease ,Digestive Diseases ,Kidney Disease ,Colon inflammation ,Epithelial tight junction ,Chronic kidney disease ,Nrf2 ,Clinical Sciences ,Gastroenterology & Hepatology - Abstract
BackgroundGut inflammation is prevalent in chronic kidney disease (CKD) and likely contributes to systemic inflammation via disruption of the epithelial tight junction with subsequent endotoxin and bacterial translocation.AimsTo study the expression profile of inflammatory and tight junction proteins in the colon from CKD rats compared to healthy controls, and demonstrate the role of Nrf2 (transcription factor nuclear factor erythroid 2-related factor 2) using a potent Nrf2 activator.MethodsCKD was induced via 5/6 nephrectomy in Sprague-Dawley rats, and dh404 (2 mg/kg/day) was used to study the effects of systemic Nrf2 activation. The experimental groups included sham, CKD and CKD+ dh404 rats. Blood and colon tissues were analyzed after a 10-week study period.ResultsColon from CKD rats showed histological evidence of colitis, depletion of epithelial tight junction proteins, significant reduction of Nrf2 and its measured target gene products (NQO1, catalase, and CuZn SOD), activation of NFkB, and upregulation of pro-inflammatory molecules (COX-2, MCP-1, iNOS, and gp91(phox)). Treatment with dh404 attenuated colonic inflammation, restored Nrf2 activity and levels of NQO1, catalase and CuZn SOD, decreased NFkB and lowered expression of COX-2, MCP-1, iNOS, and gp91(phox). This was associated with restoration of colonic epithelial tight junction proteins (occludin and claudin-1).ConclusionsCKD rats exhibited colitis, disruption of colonic epithelial tight junction, activation of inflammatory mediators, and impairment of Nrf2 pathway. Treatment with an Nrf2 activator restored Nrf2 activity, attenuated colonic inflammation, and restored epithelial tight junction proteins.
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- 2015
22. Subcellular metal imaging identifies dynamic sites of Cu accumulation in Chlamydomonas.
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Hong-Hermesdorf, Anne, Miethke, Marcus, Gallaher, Sean D, Kropat, Janette, Dodani, Sheel C, Chan, Jefferson, Barupala, Dulmini, Domaille, Dylan W, Shirasaki, Dyna I, Loo, Joseph A, Weber, Peter K, Pett-Ridge, Jennifer, Stemmler, Timothy L, Chang, Christopher J, and Merchant, Sabeeha S
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Biochemistry & Molecular Biology ,Medicinal and Biomolecular Chemistry ,Biochemistry and Cell Biology - Published
- 2015
23. Erratum: Subcellular metal imaging identifies dynamic sites of Cu accumulation in Chlamydomonas
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Hong-Hermesdorf, Anne, Miethke, Marcus, Gallaher, Sean D, Kropat, Janette, Dodani, Sheel C, Chan, Jefferson, Barupala, Dulmini, Domaille, Dylan W, Shirasaki, Dyna I, Loo, Joseph A, Weber, Peter K, Pett-Ridge, Jennifer, Stemmler, Timothy L, Chang, Christopher J, and Merchant, Sabeeha S
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Medicinal and Biomolecular Chemistry ,Chemical Sciences ,Biochemistry and Cell Biology ,Biochemistry & Molecular Biology ,Biochemistry and cell biology ,Medicinal and biomolecular chemistry - Published
- 2015
24. Induction of Herpud1 expression by ER stress is regulated by Nrf1
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Ho, Daniel V and Chan, Jefferson Y
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Biochemistry and Cell Biology ,Biological Sciences ,Brain Disorders ,Genetics ,Rare Diseases ,Aetiology ,2.1 Biological and endogenous factors ,Generic health relevance ,Blotting ,Western ,Chromatin Immunoprecipitation ,Endoplasmic Reticulum Stress ,Humans ,Membrane Proteins ,Nuclear Respiratory Factor 1 ,Promoter Regions ,Genetic ,Real-Time Polymerase Chain Reaction ,Transcriptional Activation ,ER stress ,Nuclear factor erythroid-derived 2-related factor 1 ,Transcriptional regulation ,Medicinal and Biomolecular Chemistry ,Evolutionary Biology ,Biochemistry & Molecular Biology ,Biochemistry and cell biology - Abstract
Herpud1 is an ER-localized protein that contributes to endoplasmic reticulum (ER) homeostasis by participating in the ER-associated protein degradation pathway. The Nrf1 transcription factor is important in cellular stress pathways. We show that loss of Nrf1 function results in decreased Herpud1 expression in cells and liver tissues. Expression of Herpud1 increases in response to ER stress, but not in Nrf1 knockout cells. Transactivation studies show that Nrf1 acts through antioxidant response elements located in the Herpud1 promoter, and chromatin immunoprecipitation demonstrates that Herpud1 is a direct Nrf1 target gene. These results indicate that Nrf1 is a transcriptional activator of Herpud1 expression during ER stress, and they suggest Nrf1 is a key player in the regulation of the ER stress response in cells.
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- 2015
25. Nrf2 is essential for timely M phase entry of replicating hepatocytes during liver regeneration
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Zou, Yuhong, Hu, Min, Lee, Joonyong, Nambiar, Shashank Manohar, Garcia, Veronica, Bao, Qi, Chan, Jefferson Y, and Dai, Guoli
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Medical Physiology ,Biomedical and Clinical Sciences ,Clinical Sciences ,Regenerative Medicine ,Chronic Liver Disease and Cirrhosis ,Digestive Diseases ,Liver Disease ,Genetics ,Underpinning research ,1.1 Normal biological development and functioning ,Generic health relevance ,Oral and gastrointestinal ,Animals ,CDC2 Protein Kinase ,Cell Cycle Proteins ,Cell Division ,Cyclin A2 ,Cyclin B1 ,Gene Expression Regulation ,Hepatectomy ,Hepatocytes ,Kinetics ,Liver ,Liver Regeneration ,Male ,Mice ,129 Strain ,Mice ,Inbred C57BL ,Mice ,Knockout ,Mitosis ,NF-E2-Related Factor 2 ,Nuclear Proteins ,Protein-Tyrosine Kinases ,RNA ,Messenger ,nuclear factor erythroid 2-related factor 2 ,hepatocyte mitosis ,hepatocyte proliferation ,Physiology ,Gastroenterology & Hepatology ,Clinical sciences ,Medical physiology - Abstract
The transcription factor nuclear factor erythroid 2-related factor 2 (Nrf2) regulates various cellular activities, including redox balance, detoxification, metabolism, autophagy, proliferation, and apoptosis. Several studies have demonstrated that Nrf2 regulates hepatocyte proliferation during liver regeneration. The aim of this study was to investigate how Nrf2 modulates the cell cycle of replicating hepatocytes in regenerating livers. Wild-type and Nrf2 null mice were subjected to 2/3 partial hepatectomy (PH) and killed at multiple time points for various analyses. Nrf2 null mice exhibited delayed liver regrowth, although the lost liver mass was eventually restored 7 days after PH. Nrf2 deficiency did not affect the number of hepatocytes entering the cell cycle but did delay hepatocyte mitosis. Mechanistically, the lack of Nrf2 resulted in increased mRNA and protein levels of hepatic cyclin A2 when the remaining hepatocytes were replicating in response to PH. Moreover, Nrf2 deficiency in regenerating livers caused dysregulation of Wee1, Cdc2, and cyclin B1 mRNA and protein expression, leading to decreased Cdc2 activity. Thus, Nrf2 is required for timely M phase entry of replicating hepatocytes by ensuring proper regulation of cyclin A2 and the Wee1/Cdc2/cyclin B1 pathway during liver regeneration.
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- 2015
26. Pharmacological activation of Nrf2 pathway improves pancreatic islet isolation and transplantation.
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Li, Shiri, Vaziri, Nosratola D, Masuda, Yuichi, Hajighasemi-Ossareh, Mohammad, Robles, Lourdes, Le, Aimee, Vo, Kelly, Chan, Jefferson Y, Foster, Clarence E, Stamos, Michael J, and Ichii, Hirohito
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Islets of Langerhans ,Animals ,Mice ,Mice ,Nude ,Rats ,Rats ,Sprague-Dawley ,Diabetes Mellitus ,Oleanolic Acid ,Streptozocin ,Islets of Langerhans Transplantation ,Signal Transduction ,Cell Survival ,Oxidative Stress ,Male ,NF-E2-Related Factor 2 ,Reactive oxygen species ,Oxidative stress ,Islet ,Isolation ,Transplantation ,Nuclear erythroid 2-related factor 2 ,Nude ,Sprague-Dawley ,Diabetes ,Digestive Diseases ,Metabolic and Endocrine ,Neurology & Neurosurgery ,Biological Sciences ,Technology ,Medical and Health Sciences - Abstract
Oxidative stress is a major cause of islet damage and loss during the islet isolation process. The Nrf2 pathway plays a critical role in protecting the cells against oxidative stress. The aim of this study was to investigate the effect of an Nrf2 activator (dh404) on islet isolation and transplantation in a rodent model. Islet isolation was conducted using Nrf2-deficient and wild-type mice and vehicle-treated and Nrf2 activator (dh404)-treated rats. Islet yield, viability, and Nrf2 pathway activity were determined. An in vivo islet potency test was done. Islet yield and viability in Nrf2-deficient mice was significantly lower compared to wild-type (p
- Published
- 2015
27. Optical imaging probes for selective detection of butyrylcholinesterase
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Dirak, Musa, primary, Chan, Jefferson, additional, and Kolemen, Safacan, additional
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- 2024
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28. Subcellular metal imaging identifies dynamic sites of Cu accumulation in Chlamydomonas
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Hong-Hermesdorf, Anne, Miethke, Marcus, Gallaher, Sean D, Kropat, Janette, Dodani, Sheel C, Chan, Jefferson, Barupala, Dulmini, Domaille, Dylan W, Shirasaki, Dyna I, Loo, Joseph A, Weber, Peter K, Pett-Ridge, Jennifer, Stemmler, Timothy L, Chang, Christopher J, and Merchant, Sabeeha S
- Subjects
Medicinal and Biomolecular Chemistry ,Chemical Sciences ,Cations ,Divalent ,Chlamydomonas reinhardtii ,Copper ,Gene Expression Profiling ,Homeostasis ,Hydrogen-Ion Concentration ,Isotope Labeling ,Isotopes ,Lysosomes ,Molecular Imaging ,Plastocyanin ,Polyphosphates ,Transcription Factors ,Transcriptome ,Zinc ,Biochemistry and Cell Biology ,Biochemistry & Molecular Biology ,Biochemistry and cell biology ,Medicinal and biomolecular chemistry - Abstract
We identified a Cu-accumulating structure with a dynamic role in intracellular Cu homeostasis. During Zn limitation, Chlamydomonas reinhardtii hyperaccumulates Cu, a process dependent on the nutritional Cu sensor CRR1, but it is functionally Cu deficient. Visualization of intracellular Cu revealed major Cu accumulation sites coincident with electron-dense structures that stained positive for low pH and polyphosphate, suggesting that they are lysosome-related organelles. Nano-secondary ion MS showed colocalization of Ca and Cu, and X-ray absorption spectroscopy was consistent with Cu(+) accumulation in an ordered structure. Zn resupply restored Cu homeostasis concomitant with reduced abundance of these structures. Cu isotope labeling demonstrated that sequestered Cu(+) became bioavailable for the synthesis of plastocyanin, and transcriptome profiling indicated that mobilized Cu became visible to CRR1. Cu trafficking to intracellular accumulation sites may be a strategy for preventing protein mismetallation during Zn deficiency and enabling efficient cuproprotein metallation or remetallation upon Zn resupply.
- Published
- 2014
29. Copper is an endogenous modulator of neural circuit spontaneous activity.
- Author
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Dodani, Sheel C, Firl, Alana, Chan, Jefferson, Nam, Christine I, Aron, Allegra T, Onak, Carl S, Ramos-Torres, Karla M, Paek, Jaeho, Webster, Corey M, Feller, Marla B, and Chang, Christopher J
- Subjects
Hippocampus ,Neurons ,Retina ,Animals ,Mice ,Inbred C57BL ,Mice ,Transgenic ,Mice ,Knockout ,Mice ,Rats ,Rats ,Sprague-Dawley ,Copper ,Molybdenum ,Stilbenes ,Cation Transport Proteins ,Chelating Agents ,Fluorescent Dyes ,Microscopy ,Fluorescence ,Calcium Signaling ,Structure-Activity Relationship ,Action Potentials ,Dose-Response Relationship ,Drug ,Female ,Male ,copper signaling ,fluorescent sensor ,molecular imaging ,neural activity ,Copper Transporter 1 ,Inbred C57BL ,Transgenic ,Knockout ,Sprague-Dawley ,Microscopy ,Fluorescence ,Dose-Response Relationship ,Drug ,Neurosciences ,2.1 Biological and endogenous factors ,1.1 Normal biological development and functioning ,Neurological - Abstract
For reasons that remain insufficiently understood, the brain requires among the highest levels of metals in the body for normal function. The traditional paradigm for this organ and others is that fluxes of alkali and alkaline earth metals are required for signaling, but transition metals are maintained in static, tightly bound reservoirs for metabolism and protection against oxidative stress. Here we show that copper is an endogenous modulator of spontaneous activity, a property of functional neural circuitry. Using Copper Fluor-3 (CF3), a new fluorescent Cu(+) sensor for one- and two-photon imaging, we show that neurons and neural tissue maintain basal stores of loosely bound copper that can be attenuated by chelation, which define a labile copper pool. Targeted disruption of these labile copper stores by acute chelation or genetic knockdown of the CTR1 (copper transporter 1) copper channel alters the spatiotemporal properties of spontaneous activity in developing hippocampal and retinal circuits. The data identify an essential role for copper neuronal function and suggest broader contributions of this transition metal to cell signaling.
- Published
- 2014
30. Peptidoglycan recognition proteins kill bacteria by inducing oxidative, thiol, and metal stress.
- Author
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Kashyap, Des Raj, Rompca, Annemarie, Gaballa, Ahmed, Helmann, John D, Chan, Jefferson, Chang, Christopher J, Hozo, Iztok, Gupta, Dipika, and Dziarski, Roman
- Subjects
Humans ,Bacillus subtilis ,Escherichia coli ,Metals ,Reactive Oxygen Species ,Sulfhydryl Compounds ,Carrier Proteins ,Gene Expression Regulation ,Bacterial ,Oxidative Stress ,Virology ,Microbiology ,Immunology ,Medical Microbiology - Abstract
Mammalian Peptidoglycan Recognition Proteins (PGRPs) are a family of evolutionary conserved bactericidal innate immunity proteins, but the mechanism through which they kill bacteria is unclear. We previously proposed that PGRPs are bactericidal due to induction of reactive oxygen species (ROS), a mechanism of killing that was also postulated, and later refuted, for several bactericidal antibiotics. Here, using whole genome expression arrays, qRT-PCR, and biochemical tests we show that in both Escherichia coli and Bacillus subtilis PGRPs induce a transcriptomic signature characteristic of oxidative stress, as well as correlated biochemical changes. However, induction of ROS was required, but not sufficient for PGRP killing. PGRPs also induced depletion of intracellular thiols and increased cytosolic concentrations of zinc and copper, as evidenced by transcriptome changes and supported by direct measurements. Depletion of thiols and elevated concentrations of metals were also required, but by themselves not sufficient, for bacterial killing. Chemical treatment studies demonstrated that efficient bacterial killing can be recapitulated only by the simultaneous addition of agents leading to production of ROS, depletion of thiols, and elevation of intracellular metal concentrations. These results identify a novel mechanism of bacterial killing by innate immunity proteins, which depends on synergistic effect of oxidative, thiol, and metal stress and differs from bacterial killing by antibiotics. These results offer potential targets for developing new antibacterial agents that would kill antibiotic-resistant bacteria.
- Published
- 2014
31. Methylglyoxal induces endoplasmic reticulum stress and DNA demethylation in the Keap1 promoter of human lens epithelial cells and age-related cataracts
- Author
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Palsamy, Periyasamy, Bidasee, Keshore R, Ayaki, Masahiko, Augusteyn, Robert C, Chan, Jefferson Y, and Shinohara, Toshimichi
- Subjects
Biochemistry and Cell Biology ,Biomedical and Clinical Sciences ,Biological Sciences ,Biotechnology ,Eye Disease and Disorders of Vision ,Genetics ,Human Genome ,Aetiology ,2.1 Biological and endogenous factors ,Aging ,Animals ,Blotting ,Western ,Cataract ,Cells ,Cultured ,DNA Methylation ,Diabetes Mellitus ,Experimental ,Endoplasmic Reticulum Stress ,Epithelial Cells ,Humans ,Intracellular Signaling Peptides and Proteins ,Kelch-Like ECH-Associated Protein 1 ,Lens ,Crystalline ,Mice ,Mice ,Inbred C57BL ,Mice ,Knockout ,Promoter Regions ,Genetic ,Pyruvaldehyde ,Real-Time Polymerase Chain Reaction ,Reverse Transcriptase Polymerase Chain Reaction ,Unfolded Protein Response ,Cataracts ,DNA methylation ,ER stress ,Free radicals ,Keap1 promoter demethylation ,Methylglyoxal ,Nrf2-dependent antioxidant protection ,Unfolded protein response ,Medicinal and Biomolecular Chemistry ,Medical Biochemistry and Metabolomics ,Biochemistry & Molecular Biology ,Biochemistry and cell biology ,Medical biochemistry and metabolomics - Abstract
Age-related cataracts are a leading cause of blindness. Previously, we have demonstrated the association of the unfolded protein response with various cataractogenic stressors. However, DNA methylation alterations leading to suppression of lenticular antioxidant protection remains unclear. Here, we report the methylglyoxal-mediated sequential events responsible for Keap1 promoter DNA demethylation in human lens epithelial cells, because Keap1 is a negative regulatory protein that regulates the Nrf2 antioxidant protein. Methylglyoxal induces endoplasmic reticulum stress and activates the unfolded protein response leading to overproduction of reactive oxygen species before human lens epithelial cell death. Methylglyoxal also suppresses Nrf2 and DNA methyltransferases but activates the DNA demethylation pathway enzyme TET1. Bisulfite genomic DNA sequencing confirms the methylglyoxal-mediated Keap1 promoter DNA demethylation leading to overexpression of Keap1 mRNA and protein. Similarly, bisulfite genomic DNA sequencing shows that human clear lenses (n = 15) slowly lose 5-methylcytosine in the Keap1 promoter throughout life, at a rate of 1% per year. By contrast, diabetic cataractous lenses (n = 21) lose an average of 90% of the 5-methylcytosine regardless of age. Overexpressed Keap1 protein is responsible for decreasing Nrf2 by proteasomal degradation, thereby suppressing Nrf2-dependent stress protection. This study demonstrates for the first time the associations of unfolded protein response activation, Nrf2-dependent antioxidant system failure, and loss of Keap1 promoter methylation because of altered active and passive DNA demethylation pathway enzymes in human lens epithelial cells by methylglyoxal. As an outcome, the cellular redox balance is altered toward lens oxidation and cataract formation.
- Published
- 2014
32. Wilson disease protein ATP7B utilizes lysosomal exocytosis to maintain copper homeostasis.
- Author
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Polishchuk, Elena V, Concilli, Mafalda, Iacobacci, Simona, Chesi, Giancarlo, Pastore, Nunzia, Piccolo, Pasquale, Paladino, Simona, Baldantoni, Daniela, van IJzendoorn, Sven CD, Chan, Jefferson, Chang, Christopher J, Amoresano, Angela, Pane, Francesca, Pucci, Piero, Tarallo, Antonietta, Parenti, Giancarlo, Brunetti-Pierri, Nicola, Settembre, Carmine, Ballabio, Andrea, and Polishchuk, Roman S
- Subjects
Cells ,Cultured ,Hela Cells ,Lysosomes ,Golgi Apparatus ,Hepatocytes ,Bile ,Animals ,Mice ,Knockout ,Humans ,Mice ,Copper ,Cation Transport Proteins ,Microtubule-Associated Proteins ,RNA ,Small Interfering ,Fluorescent Antibody Technique ,Exocytosis ,Protein Transport ,Homeostasis ,Mutation ,Male ,Basic Helix-Loop-Helix Leucine Zipper Transcription Factors ,Adenosine Triphosphatases ,Hep G2 Cells ,Dynactin Complex ,Copper-transporting ATPases ,HeLa Cells ,Developmental Biology ,Biological Sciences ,Medical and Health Sciences - Abstract
Copper is an essential yet toxic metal and its overload causes Wilson disease, a disorder due to mutations in copper transporter ATP7B. To remove excess copper into the bile, ATP7B traffics toward canalicular area of hepatocytes. However, the trafficking mechanisms of ATP7B remain elusive. Here, we show that, in response to elevated copper, ATP7B moves from the Golgi to lysosomes and imports metal into their lumen. ATP7B enables lysosomes to undergo exocytosis through the interaction with p62 subunit of dynactin that allows lysosome translocation toward the canalicular pole of hepatocytes. Activation of lysosomal exocytosis stimulates copper clearance from the hepatocytes and rescues the most frequent Wilson-disease-causing ATP7B mutant to the appropriate functional site. Our findings indicate that lysosomes serve as an important intermediate in ATP7B trafficking, whereas lysosomal exocytosis operates as an integral process in copper excretion and hence can be targeted for therapeutic approaches to combat Wilson disease.
- Published
- 2014
33. Making light of stress
- Author
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Chan, Jefferson and Chang, Christopher J
- Subjects
Medical Biotechnology ,Biological Sciences ,Biomedical and Clinical Sciences ,Animals ,Chemical and Drug Induced Liver Injury ,Female ,Fluorescence Resonance Energy Transfer ,Liver ,Optical Imaging ,Oxidative Stress - Published
- 2014
34. The circadian clock regulates rhythmic activation of the NRF2/glutathione-mediated antioxidant defense pathway to modulate pulmonary fibrosis
- Author
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Pekovic-Vaughan, Vanja, Gibbs, Julie, Yoshitane, Hikari, Yang, Nan, Pathiranage, Dharshika, Guo, Baoqiang, Sagami, Aya, Taguchi, Keiko, Bechtold, David, Loudon, Andrew, Yamamoto, Masayuki, Chan, Jefferson, van der Horst, Gijsbertus TJ, Fukada, Yoshitaka, and Meng, Qing-Jun
- Subjects
Biochemistry and Cell Biology ,Biomedical and Clinical Sciences ,Biological Sciences ,Sleep Research ,Lung ,Aetiology ,2.1 Biological and endogenous factors ,Underpinning research ,1.1 Normal biological development and functioning ,Respiratory ,Animals ,Anticarcinogenic Agents ,Bleomycin ,Circadian Clocks ,E-Box Elements ,Female ,Gene Expression Regulation ,Glutathione ,Homeostasis ,Isothiocyanates ,Mice ,Mice ,Inbred C57BL ,NF-E2-Related Factor 2 ,Oxidative Stress ,Promoter Regions ,Genetic ,Protein Binding ,Pulmonary Fibrosis ,Sulfoxides ,circadian clock ,glutathione ,NRF2 ,bleomycin ,pulmonary fibrosis ,Medical and Health Sciences ,Psychology and Cognitive Sciences ,Developmental Biology ,Biological sciences ,Biomedical and clinical sciences ,Psychology - Abstract
The disruption of the NRF2 (nuclear factor erythroid-derived 2-like 2)/glutathione-mediated antioxidant defense pathway is a critical step in the pathogenesis of several chronic pulmonary diseases and cancer. While the mechanism of NRF2 activation upon oxidative stress has been widely investigated, little is known about the endogenous signals that regulate the NRF2 pathway in lung physiology and pathology. Here we show that an E-box-mediated circadian rhythm of NRF2 protein is essential in regulating the rhythmic expression of antioxidant genes involved in glutathione redox homeostasis in the mouse lung. Using an in vivo bleomycin-induced lung fibrosis model, we reveal a clock "gated" pulmonary response to oxidative injury, with a more severe fibrotic effect when bleomycin was applied at a circadian nadir in NRF2 levels. Timed administration of sulforaphane, an NRF2 activator, significantly blocked this phenotype. Moreover, in the lungs of the arrhythmic Clock(Δ19) mice, the levels of NRF2 and the reduced glutathione are constitutively low, associated with increased protein oxidative damage and a spontaneous fibrotic-like pulmonary phenotype. Our findings reveal a pivotal role for the circadian control of the NRF2/glutathione pathway in combating oxidative/fibrotic lung damage, which might prompt new chronotherapeutic strategies for the treatment of human lung diseases, including idiopathic pulmonary fibrosis.
- Published
- 2014
35. Copper transporter 2 regulates intracellular copper and sensitivity to cisplatin.
- Author
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Huang, Carlos P, Fofana, Mariama, Chan, Jefferson, Chang, Christopher J, and Howell, Stephen B
- Subjects
Cell Line ,Cell Line ,Tumor ,Animals ,Humans ,Mice ,Neoplasms ,Boron Compounds ,Cisplatin ,Sulfides ,Copper ,Cation Transport Proteins ,Antineoplastic Agents ,Gene Expression Regulation ,Neoplastic ,Up-Regulation ,Drug Resistance ,Neoplasm ,Gene Knockdown Techniques ,SLC31 Proteins ,Tumor ,Gene Expression Regulation ,Neoplastic ,Drug Resistance ,Neoplasm ,Cancer ,2.1 Biological and endogenous factors ,Analytical Chemistry ,Chemical Sciences - Abstract
Mammalian cells express two copper (Cu) influx transporters, CTR1 and CTR2. CTR1 serves as an influx transporter for both Cu and cisplatin (cDDP). In mouse embryo fibroblasts, reduction of CTR1 expression renders cells resistant to cDDP whereas reduction of CTR2 makes them hypersensitive both in vitro and in vivo. To investigate the role of CTR2 on intracellular Cu and cDDP sensitivity its expression was molecularly altered in the human epithelial 2008 cancer cell model. Intracellular exchangeable Cu(+) was measured with the fluorescent probe Coppersensor-3 (CS3). The ability of CS3 to report on changes in intracellular Cu(+) was validated by showing that Cu chelators reduced its signal, and that changes in signal accompanied alterations in expression of the major Cu influx transporter CTR1 and the two Cu efflux transporters, ATP7A and ATP7B. Constitutive knock down of CTR2 mRNA by ∼50% reduced steady-state exchangeable Cu by 22-23% and increased the sensitivity of 2008 cells by a factor of 2.6-2.9 in two separate clones. Over-expression of CTR2 increased exchangeable Cu(+) by 150% and rendered the 2008 cells 2.5-fold resistant to cDDP. The results provide evidence that CS3 can quantitatively assess changes in exchangeable Cu(+), and that CTR2 regulates both the level of exchangeable Cu(+) and sensitivity to cDDP in a model of human epithelial cancer. This study introduces CS3 and related sensors as novel tools for probing and assaying Cu-dependent sensitivity to anticancer therapeutics.
- Published
- 2014
36. A general strategy to optimize the performance of aza-BODIPY-based probes for enhanced photoacoustic properties
- Author
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Yadav, Anuj K., primary, Tapia Hernandez, Rodrigo, additional, and Chan, Jefferson, additional
- Published
- 2021
- Full Text
- View/download PDF
37. Near-infrared II photoacoustic probes for nitric oxide sensing
- Author
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Lucero, Melissa Y., primary, East, Amanda K., additional, and Chan, Jefferson, additional
- Published
- 2021
- Full Text
- View/download PDF
38. Nrf2 is involved in maintaining hepatocyte identity during liver regeneration.
- Author
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Zou, Yuhong, Lee, Joonyong, Nambiar, Shashank Manohar, Hu, Min, Rui, Wenjuan, Bao, Qi, Chan, Jefferson Y, and Dai, Guoli
- Subjects
Liver ,Hepatocytes ,Animals ,Mice ,Knockout ,Mice ,Blotting ,Western ,Immunohistochemistry ,Reverse Transcriptase Polymerase Chain Reaction ,Liver Regeneration ,NF-E2-Related Factor 2 ,General Science & Technology - Abstract
Nrf2, a central regulator of the cellular defense against oxidative stress and inflammation, participates in modulating hepatocyte proliferation during liver regeneration. It is not clear, however, whether Nrf2 regulates hepatocyte growth, an important cellular mechanism to regain the lost liver mass after partial hepatectomy (PH). To determine this, various analyses were performed in wild-type and Nrf2-null mice following PH. We found that, at 60 h post-PH, the vast majority of hepatocytes lacking Nrf2 reduced their sizes, activated hepatic progenitor markers (CD133, TWEAK receptor, and trefoil factor family 3), depleted HNF4α protein, and downregulated the expression of a group of genes critical for their functions. Thus, the identity of hepatocytes deficient in Nrf2 was transiently but massively impaired in response to liver mass loss. This event was associated with the coupling of protein depletion of hepatic HNF4α, a master regulator of hepatocyte differentiation, and concomitant inactivation of hepatic Akt1 and p70S6K, critical hepatocyte growth signaling molecules. We conclude that Nrf2 participates in maintaining newly regenerated hepatocytes in a fully differentiated state by ensuring proper regulation of HNF4α, Akt1, and p70S6K during liver regeneration.
- Published
- 2014
39. Nrf2 is essential for the expression of lipocalin–prostaglandin D synthase induced by prostaglandin D2
- Author
-
Kim, Kyun Ha, Sadikot, Ruxana T, Xiao, Lei, Christman, John W, Freeman, Michael L, Chan, Jefferson Y, Oh, Yu-Kyoung, Blackwell, Timothy S, and Joo, Myungsoo
- Subjects
Biomedical and Clinical Sciences ,Clinical Sciences ,Lung ,Genetics ,2.1 Biological and endogenous factors ,Aetiology ,Amino Acid Sequence ,Animals ,Base Sequence ,Binding Sites ,Cell Line ,Cyclooxygenase 2 ,Intramolecular Oxidoreductases ,Lipocalins ,Lipopolysaccharides ,Macrophages ,Mice ,Mice ,Inbred C57BL ,Mice ,Knockout ,NF-E2-Related Factor 2 ,Neutrophil Infiltration ,Neutrophils ,Pneumonia ,Promoter Regions ,Genetic ,Prostaglandin D2 ,Protein Binding ,RNA Interference ,RNA ,Small Interfering ,Sequence Analysis ,DNA ,Toll-Like Receptor 4 ,Nrf2 ,Lung inflammation ,Lipocalin-prostaglandin D synthase ,Prostaglandin D-2 ,Gene expression ,Free radicals ,Lipocalin–prostaglandin D synthase ,Prostaglandin D(2) ,Medicinal and Biomolecular Chemistry ,Biochemistry and Cell Biology ,Medical Biochemistry and Metabolomics ,Biochemistry & Molecular Biology ,Biochemistry and cell biology ,Medical biochemistry and metabolomics - Abstract
Nrf2 is a transcription factor that protects against inflammatory diseases, but the underlying mechanism of this effect remains unclear. Here, we report that Nrf2 uses lipocalin-prostaglandin D synthase (L-PGDS) as a mechanism for suppressing inflammation. Exogenously added prostaglandin D2 (PGD2) induced L-PGDS expression in bone-marrow-derived macrophages (BMDMs), suggesting a positive feedback loop between L-PGDS expression and PGD2. Unlike lipopolysaccharide (LPS)-induced L-PGDS expression, PGD2-mediated expression was independent of MAPK, PU.1, or TLR4. Sequence analysis located a putative Nrf2 binding site in the murine L-PGDS promoter, to which Nrf2 bound when treated with PGD2. Chemical activation, or overexpression, of Nrf2 was sufficient to induce L-PGDS expression in macrophages, BMDMs, or lungs of Nrf2-knockout (KO) mice, but treatment with PGD2 failed to do so, suggesting a pivotal role for Nrf2 in the expression of L-PGDS. Consistent with this, expression of Nrf2 in the lungs of Nrf2-KO mice was sufficient to induce the expression of L-PGDS and to reduce neutrophilic lung inflammation elicited by LPS. Furthermore, expression of L-PGDS in mouse lungs decreased neutrophilic infiltration, ameliorating lung inflammation in mice. Together, our results show that Nrf2, activated by PGD2, induced L-PGDS expression, resulting in decreased inflammation. We suggest that the positive feedback induction of L-PGDS by PGD2 is part of the mechanism by which Nrf2 regulates inflammation.
- Published
- 2013
40. Molecular Imaging of Labile Iron(II) Pools in Living Cells with a Turn-On Fluorescent Probe
- Author
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Au-Yeung, Ho Yu, Chan, Jefferson, Chantarojsiri, Teera, and Chang, Christopher J
- Subjects
Chemical Sciences ,Nutrition ,1.1 Normal biological development and functioning ,Underpinning research ,Generic health relevance ,Ascorbic Acid ,Cell Survival ,Drug Design ,Fluorescent Dyes ,Hep G2 Cells ,Hepcidins ,Humans ,Iron ,Molecular Imaging ,General Chemistry ,Chemical sciences ,Engineering - Abstract
Iron is an essential metal for living organisms, but misregulation of its homeostasis at the cellular level can trigger detrimental oxidative and/or nitrosative stress and damage events. Motivated to help study the physiological and pathological consequences of biological iron regulation, we now report a reaction-based strategy for monitoring labile Fe(2+) pools in aqueous solution and living cells. Iron Probe 1 (IP1) exploits a bioinspired, iron-mediated oxidative C-O bond cleavage reaction to achieve a selective turn-on response to Fe(2+) over a range of cellular metal ions in their bioavailable forms. We show that this first-generation chemical tool for fluorescence Fe(2+) detection can visualize changes in exchangeable iron stores in living cells upon iron supplementation or depletion, including labile iron pools at endogenous, basal levels. Moreover, IP1 can be used to identify reversible expansion of labile iron pools by stimulation with vitamin C or the iron regulatory hormone hepcidin, providing a starting point for further investigations of iron signaling and stress events in living systems as well as future probe development.
- Published
- 2013
41. Characterization of Nrf1b, a Novel Isoform of the Nuclear Factor-Erythroid-2 Related Transcription Factor-1 That Activates Antioxidant Response Element-Regulated Genes
- Author
-
Kwong, Eric K, Kim, Kyung-Mi, Penalosa, Patrick J, Chan, Jefferson Y, and Tsuji, Yoshiaki
- Subjects
factor e2-related factor-1 ,endoplasmic-reticulum ,alternative promoters ,factor tcf11 ,negative regulation ,expression ,mechanisms ,pathway ,protein ,cells - Published
- 2012
42. Nuclear Factor-E2-Related Factor 2 Expression in Liver Is Critical for Induction of NAD(P)H:quinone Oxidoreductase 1 during Cholestasis
- Author
-
Chan, Jefferson Y. and Klaassen, Curtis D.
- Published
- 2006
43. Liver-Specific Inactivation of the Nrf1 Gene in Adult Mouse Leads to Nonalcoholic Steatohepatitis and Hepatic Neoplasia
- Author
-
Xu, Zhenrong, Chen, Linyun, Leung, Laura, Lee, Candy, Chan, Jefferson Y., and Kan, Yuet Wai
- Published
- 2005
44. Knockout of the transcription factor NRF2 disrupts spermatogenesis in an age-dependent manner
- Author
-
Nakamura, Brooke N, Lawson, Gregory, Chan, Jefferson Y, Banuelos, Jésus, Cortés, Mabel M, Hoang, Yvonne D, Ortiz, Laura, Rau, Bogdan A, and Luderer, Ulrike
- Subjects
Reproductive Medicine ,Biochemistry and Cell Biology ,Biomedical and Clinical Sciences ,Biological Sciences ,Infertility ,Contraception/Reproduction ,Prevention ,Genetics ,Urologic Diseases ,1.1 Normal biological development and functioning ,Aging ,Animals ,Disease Progression ,Infertility ,Male ,Male ,Mice ,Mice ,Inbred C57BL ,Mice ,Knockout ,NF-E2-Related Factor 2 ,Oxidative Stress ,Reactive Oxygen Species ,Sperm Count ,Sperm Motility ,Spermatogenesis ,Transcription Factors ,Oxidative stress ,NRF2 ,Testis ,Reproduction ,Free radicals ,Medicinal and Biomolecular Chemistry ,Medical Biochemistry and Metabolomics ,Biochemistry & Molecular Biology ,Biochemistry and cell biology ,Medical biochemistry and metabolomics - Abstract
Oxidative stress occurs when generation of reactive oxygen species (ROS) overwhelms antioxidant defenses. Oxidative stress has been associated with male infertility. The transcription factor nuclear factor-erythroid 2-related factor 2 (NRF2) regulates basal and inducible transcription of genes encoding enzymes important for protection against ROS. We hypothesized that deletion of the Nrf2 gene causes testicular and epididymal oxidative stress, which disrupts spermatogenesis. Our results show that male Nrf2(-/-) mice have decreased fertility compared to wild-type and heterozygous littermates, due to accumulating seminiferous tubule damage with increasing age. Testicular sperm head counts, epididymal sperm counts, and epididymal sperm motility in 2-month-old Nrf2(-/-) males did not differ from those of wild-type littermates; however, by age 6 months, Nrf2(-/-) males had 44% lower testicular sperm head counts, 65% lower epididymal sperm counts, and 66% lower epididymal sperm motility than wild-type males. Two- to 4-month-old Nrf2(-/-) males had elevated levels of testicular and epididymal lipid peroxidation and testicular germ cell apoptosis, and decreased levels of antioxidants, compared to wild-type males. These results provide evidence that oxidative stress has deleterious effects on the testis and epididymis and demonstrate a critical role for the transcription factor NRF2 in preventing oxidative disruption of spermatogenesis.
- Published
- 2010
45. Long Isoforms of NRF1 Contribute to Arsenic-Induced Antioxidant Response in Human Keratinocytes
- Author
-
Zhao, Rui, Hou, Yongyong, Xue, Peng, Woods, Courtney G, Fu, Jingqi, Feng, Bo, Guan, Dawei, Sun, Guifan, Chan, Jefferson Y, Waalkes, Michael P, Andersen, Melvin E, and Pi, Jingbo
- Subjects
endoplasmic-reticulum stress ,element-mediated expression ,bzip transcription factor ,oxidative dna-damage ,adaptive response ,embryonic lethality ,molecular-cloning ,drinking-water ,low-level ,activation - Abstract
BACKGROUND: Human exposure to inorganic arsenic (iAs), a potent oxidative stressor, causes various dermal disorders, including hyperkeratosis and skin cancer. Nuclear factor-erythroid 2-related factor 1 (NRF1, also called NFE2L1) plays a critical role in regulating the expression of many antioxidant response element (ARE)-dependent genes. OBJECTIVES: We investigated the role of NRF1 in arsenic-induced antioxidant response and cytotoxicity in human keratinocytes. RESULTS: In cultured human keratinocyte HaCaT cells, inorganic arsenite (iAs(3+)) enhanced the protein accumulation of long isoforms (120-140 kDa) of NRF1 in a dose-and time-dependent fashion. These isoforms accumulated mainly in the nuclei of HaCaT cells. Selective deficiency of NRF1 by lentiviral short-hairpin RNAs in HaCaT cells [NRF1-knockdown (KD)] led to decreased expression of gamma-glutamate cysteine ligase catalytic subunit (GCLC) and regulatory subunit (GCLM) and a reduced level of intra-cellular glutathione. In response to acute iAs(3+) exposure, induction of some ARE-dependent genes, including NAD(P)H:quinone oxidoreductase 1 (NQO1), GCLC, and GCLM, was significantly attenuated in NRF1-KD cells. However, the iAs(3)-induced expression of heme oxygenase 1 (HMOX-1) was unaltered by silencing NRF1, suggesting that HMOX-1 is not regulated by NRF1. In addition, the lack of NRF1 in HaCaT cells did not disturb iAs(3+)-induced NRF2 accumulation but noticeably decreased Kelch-like ECH-associated protein 1 (KEAP1) levels under basal and iAs(3+)-exposed conditions, suggesting a potential interaction between NRF1 and KEAP1. Consistent with the critical role of NRF1 in the transcriptional regulation of some ARE-bearing genes, knockdown of NRF1 significantly increased iAs(3+)-induced cytotoxicity and apoptosis. CONCLUSIONS: Here, we demonstrate for the first time that long isoforms of NRF1 contribute to arsenic-induced antioxidant response in human keratinocytes and protect the cells from acute arsenic cytotoxicity.
- Published
- 2010
46. NADPH oxidase limits innate immune responses in the lungs in mice.
- Author
-
Segal, Brahm H, Han, Wei, Bushey, Jennifer J, Joo, Myungsoo, Bhatti, Zahida, Feminella, Joy, Dennis, Carly G, Vethanayagam, R Robert, Yull, Fiona E, Capitano, Maegan, Wallace, Paul K, Minderman, Hans, Christman, John W, Sporn, Michael B, Chan, Jefferson, Vinh, Donald C, Holland, Steven M, Romani, Luigina R, Gaffen, Sarah L, Freeman, Michael L, and Blackwell, Timothy S
- Subjects
Lung ,Macrophages ,Animals ,Mice ,Granulomatous Disease ,Chronic ,Inflammation ,NF-kappa B ,Membrane Glycoproteins ,Cytokines ,Gene Expression Regulation ,Enzymologic ,Oxidation-Reduction ,NF-E2-Related Factor 2 ,Immunity ,Innate ,NADPH Oxidase 2 ,NADPH Oxidases ,Granulomatous Disease ,Chronic ,NADPH Oxidase ,Gene Expression Regulation ,Enzymologic ,Immunity ,Innate ,General Science & Technology - Abstract
BackgroundChronic granulomatous disease (CGD), an inherited disorder of the NADPH oxidase in which phagocytes are defective in generating superoxide anion and downstream reactive oxidant intermediates (ROIs), is characterized by recurrent bacterial and fungal infections and by excessive inflammation (e.g., inflammatory bowel disease). The mechanisms by which NADPH oxidase regulates inflammation are not well understood.Methodology/principal findingsWe found that NADPH oxidase restrains inflammation by modulating redox-sensitive innate immune pathways. When challenged with either intratracheal zymosan or LPS, NADPH oxidase-deficient p47(phox-/-) mice and gp91(phox)-deficient mice developed exaggerated and progressive lung inflammation, augmented NF-kappaB activation, and elevated downstream pro-inflammatory cytokines (TNF-alpha, IL-17, and G-CSF) compared to wildtype mice. Replacement of functional NADPH oxidase in bone marrow-derived cells restored the normal lung inflammatory response. Studies in vivo and in isolated macrophages demonstrated that in the absence of functional NADPH oxidase, zymosan failed to activate Nrf2, a key redox-sensitive anti-inflammatory regulator. The triterpenoid, CDDO-Im, activated Nrf2 independently of NADPH oxidase and reduced zymosan-induced lung inflammation in CGD mice. Consistent with these findings, zymosan-treated peripheral blood mononuclear cells from X-linked CGD patients showed impaired Nrf2 activity and increased NF-kappaB activation.Conclusions/significanceThese studies support a model in which NADPH oxidase-dependent, redox-mediated signaling is critical for termination of lung inflammation and suggest new potential therapeutic targets for CGD.
- Published
- 2010
47. Prognostic Significance of Tumor-infiltrating Lymphocytes and Anti-programmed Death-ligand 1 Therapy in Sinonasal Mucosal Melanoma: A 10-year Experience at a Single Institution
- Author
-
Tarabay, Jana, primary, Ren, Dong, additional, Ifegu, Ibe, additional, Zada, Sherehan, additional, Edwards, Robert, additional, Chan, Jefferson, additional, Kuan, Edward C., additional, and Wang, Beverly, additional
- Published
- 2023
- Full Text
- View/download PDF
48. Development of Nitroreductase‐Activatable Fluoroquinolone Prodrugs Exhibiting Attenuated Magnesium Ion Binding
- Author
-
Zhao, Zhenxiang, primary, Yadav, Anuj K., additional, Weng, Yourong, additional, and Chan, Jefferson, additional
- Published
- 2023
- Full Text
- View/download PDF
49. Near-infrared photoactivatable nitric oxide donors with photoacoustic readout
- Author
-
Zhou, Effie Y., primary, Knox, Hailey J., additional, Reinhardt, Christopher J., additional, Partipilo, Gina, additional, and Chan, Jefferson, additional
- Published
- 2020
- Full Text
- View/download PDF
50. The Intestinal Copper Exporter CUA-1 Is Required for Systemic Copper Homeostasis in Caenorhabditis elegans
- Author
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Chun, Haarin, Sharma, Anuj Kumar, Lee, Jaekwon, Chan, Jefferson, Jia, Shang, and Kim, Byung-Eun
- Published
- 2017
- Full Text
- View/download PDF
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