7 results on '"Chaudhry, Nouman S."'
Search Results
2. VIDIIA Hunter diagnostic platform: a low-cost, smartphone connected, artificial intelligence-assisted COVID-19 rapid diagnostics approved for medical use in the UK
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Poirier, Aurore C., primary, Riaño Moreno, Ruben D., additional, Takaindisa, Leona, additional, Carpenter, Jessie, additional, Mehat, Jai W., additional, Haddon, Abi, additional, Rohaim, Mohammed A., additional, Williams, Craig, additional, Burkhart, Peter, additional, Conlon, Chris, additional, Wilson, Matthew, additional, McClumpha, Matthew, additional, Stedman, Anna, additional, Cordoni, Guido, additional, Branavan, Manoharanehru, additional, Tharmakulasingam, Mukunthan, additional, Chaudhry, Nouman S., additional, Locker, Nicolas, additional, Fernando, Anil, additional, Balachandran, Wamadeva, additional, Bullen, Mark, additional, Collins, Nadine, additional, Rimer, David, additional, Horton, Daniel L., additional, Munir, Muhammad, additional, and La Ragione, Roberto M., additional
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- 2023
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3. VIDIIA Hunter diagnostic platform : a low-cost, smartphone connected, artificial intelligence-assisted COVID-19 rapid diagnostics approved for medical use in the UK
- Author
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Poirier, Aurore C., Riaño Moreno, Ruben D., Takaindisa, Leona, Carpenter, Jessie, Mehat, Jai W., Haddon, Abi, Rohaim, Mohammed A., Williams, Craig, Burkhart, Peter, Conlon, Chris, Wilson, Matthew, McClumpha, Matthew, Stedman, Anna, Cordoni, Guido, Branavan, Manoharanehru, Tharmakulasingam, Mukunthan, Chaudhry, Nouman S., Locker, Nicolas, Fernando, Anil, Balachandran, Wamadeva, Bullen, Mark, Collins, Nadine, Rimer, David, Horton, Daniel L., Munir, Muhammad, La Ragione, Roberto M., Poirier, Aurore C., Riaño Moreno, Ruben D., Takaindisa, Leona, Carpenter, Jessie, Mehat, Jai W., Haddon, Abi, Rohaim, Mohammed A., Williams, Craig, Burkhart, Peter, Conlon, Chris, Wilson, Matthew, McClumpha, Matthew, Stedman, Anna, Cordoni, Guido, Branavan, Manoharanehru, Tharmakulasingam, Mukunthan, Chaudhry, Nouman S., Locker, Nicolas, Fernando, Anil, Balachandran, Wamadeva, Bullen, Mark, Collins, Nadine, Rimer, David, Horton, Daniel L., Munir, Muhammad, and La Ragione, Roberto M.
- Abstract
Introduction: Accurate and rapid diagnostics paired with effective tracking and tracing systems are key to halting the spread of infectious diseases, limiting the emergence of new variants and to monitor vaccine efficacy. The current gold standard test (RT-qPCR) for COVID-19 is highly accurate and sensitive, but is time-consuming, and requires expensive specialised, lab-based equipment. Methods: Herein, we report on the development of a SARS-CoV-2 (COVID-19) rapid and inexpensive diagnostic platform that relies on a reverse-transcription loop-mediated isothermal amplification (RT-LAMP) assay and a portable smart diagnostic device. Automated image acquisition and an Artificial Intelligence (AI) deep learning model embedded in the Virus Hunter 6 (VH6) device allow to remove any subjectivity in the interpretation of results. The VH6 device is also linked to a smartphone companion application that registers patients for swab collection and manages the entire process, thus ensuring tests are traced and data securely stored. Results: Our designed AI-implemented diagnostic platform recognises the nucleocapsid protein gene of SARS-CoV-2 with high analytical sensitivity and specificity. A total of 752 NHS patient samples, 367 confirmed positives for coronavirus disease (COVID-19) and 385 negatives, were used for the development and validation of the test and the AI-assisted platform. The smart diagnostic platform was then used to test 150 positive clinical samples covering a dynamic range of clinically meaningful viral loads and 250 negative samples. When compared to RT-qPCR, our AI-assisted diagnostics platform was shown to be reliable, highly specific (100%) and sensitive (98–100% depending on viral load) with a limit of detection of 1.4 copies of RNA per µL in 30 min. Using this data, our CE-IVD and MHRA approved test and associated diagnostic platform has been approved for medical use in the United Kingdom under the UK Health Security Agency’s Medical Devices (Coronaviru
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- 2023
4. Artificial Intelligence-Assisted Loop Mediated Isothermal Amplification (AI-LAMP) for Rapid Detection of SARS-CoV-2
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Rohaim, Mohammed A., primary, Clayton, Emily, additional, Sahin, Irem, additional, Vilela, Julianne, additional, Khalifa, Manar E., additional, Al-Natour, Mohammad Q., additional, Bayoumi, Mahmoud, additional, Poirier, Aurore C., additional, Branavan, Manoharanehru, additional, Tharmakulasingam, Mukunthan, additional, Chaudhry, Nouman S., additional, Sodi, Ravinder, additional, Brown, Amy, additional, Burkhart, Peter, additional, Hacking, Wendy, additional, Botham, Judy, additional, Boyce, Joe, additional, Wilkinson, Hayley, additional, Williams, Craig, additional, Whittingham-Dowd, Jayde, additional, Shaw, Elisabeth, additional, Hodges, Matt, additional, Butler, Lisa, additional, Bates, Michelle D., additional, La Ragione, Roberto, additional, Balachandran, Wamadeva, additional, Fernando, Anil, additional, and Munir, Muhammad, additional
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- 2020
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5. Artificial Intelligence-Assisted Loop Mediated Isothermal Amplification (ai-LAMP) for Rapid and Reliable Detection of SARS-CoV-2
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Rohaim, Mohammed A, primary, Clayton, Emily, additional, Sahin, Irem, additional, Vilela, Julianne, additional, Khalifa, Manar, additional, Al-Natour, Mohammad, additional, Bayoumi, Mahmoud, additional, Poirier, Aurore, additional, Branavan, Manoharanehru, additional, Tharmakulasingam, Mukunthan, additional, Chaudhry, Nouman S, additional, Sodi, Ravinder, additional, Brown, Amy, additional, Burkhart, Peter, additional, Hacking, Wendy, additional, Botham, Judy, additional, Boyce, Joe, additional, Wilkinson, Hayley, additional, Williams, Craig, additional, Bates, Michelle, additional, La Ragione, Roberto, additional, Balachandran, Wamadeva, additional, Fernando, Anil, additional, and Munir, Muhammad, additional
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- 2020
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6. An Artificial Intelligence-Assisted Portable Low-Cost Device for the Rapid Detection of SARS-CoV-2.
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Tharmakulasingam, Mukunthan, Chaudhry, Nouman S., Branavan, Manoharanehru, Balachandran, Wamadeva, Poirier, Aurore C., Rohaim, Mohammed A., Munir, Muhammad, La Ragione, Roberto M., and Fernando, Anil
- Subjects
SARS-CoV-2 ,COVID-19 ,ARTIFICIAL intelligence ,IMAGE processing ,SENSITIVITY & specificity (Statistics) ,INTELLIGENT buildings ,IMAGE registration - Abstract
An artificial intelligence-assisted low-cost portable device for the rapid detection of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is presented here. This standalone temperature-controlled device houses tubes designed for conducting reverse transcription loop-mediated isothermal amplification (RT-LAMP) assays. Moreover, the device utilises tubes illuminated by LEDs, an in-built camera, and a small onboard computer with automated image acquisition and processing algorithms. This intelligent device significantly reduces the normal assay run time and removes the subjectivity associated with operator interpretation of colourimetric RT-LAMP results. To further improve this device's usability, a mobile app has been integrated into the system to control the LAMP assay environment and to visually display the assay results by connecting the device to a smartphone via Bluetooth. This study was undertaken using ~5000 images produced from the ~200 LAMP amplification assays using the prototype device. Synthetic RNA and a small panel of positive and negative SARS-CoV-2 patient samples were assayed for this study. State-of-the-art image processing and artificial intelligence algorithms were applied to these images to analyse them and to select the most efficient algorithm. The template matching algorithm for image extraction and MobileNet CNN architecture for classification results provided 98.0% accuracy with an average run time of 20 min to confirm the endpoint result. Two working points were chosen based on the best compromise between sensitivity and specificity. The high sensitivity point has a sensitivity value of 99.12% and specificity value of 70.8%, while at the high specificity point, the sensitivity is 96.05% and specificity 93.59%. Furthermore, this device provides an efficient and cost-effective platform for non-health professionals to detect not only SARS-CoV-2 but also other pathogens in resource-limited laboratories, factories, airports, schools, universities, and homes. [ABSTRACT FROM AUTHOR]
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- 2021
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7. Deep Learning for Breast Cancer Risk Prediction: Application to a Large Representative UK Screening Cohort.
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Ellis S, Gomes S, Trumble M, Halling-Brown MD, Young KC, Chaudhry NS, Harris P, and Warren LM
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- Humans, Female, United Kingdom epidemiology, Middle Aged, Aged, Risk Assessment methods, Mass Screening methods, Cohort Studies, Breast Neoplasms diagnosis, Breast Neoplasms epidemiology, Breast Neoplasms diagnostic imaging, Deep Learning, Mammography methods, Early Detection of Cancer methods
- Abstract
Purpose To develop an artificial intelligence (AI) deep learning tool capable of predicting future breast cancer risk from a current negative screening mammographic examination and to evaluate the model on data from the UK National Health Service Breast Screening Program. Materials and Methods The OPTIMAM Mammography Imaging Database contains screening data, including mammograms and information on interval cancers, for more than 300 000 female patients who attended screening at three different sites in the United Kingdom from 2012 onward. Cancer-free screening examinations from women aged 50-70 years were performed and classified as risk-positive or risk-negative based on the occurrence of cancer within 3 years of the original examination. Examinations with confirmed cancer and images containing implants were excluded. From the resulting 5264 risk-positive and 191 488 risk-negative examinations, training ( n = 89 285), validation ( n = 2106), and test ( n = 39 351) datasets were produced for model development and evaluation. The AI model was trained to predict future cancer occurrence based on screening mammograms and patient age. Performance was evaluated on the test dataset using the area under the receiver operating characteristic curve (AUC) and compared across subpopulations to assess potential biases. Interpretability of the model was explored, including with saliency maps. Results On the hold-out test set, the AI model achieved an overall AUC of 0.70 (95% CI: 0.69, 0.72). There was no evidence of a difference in performance across the three sites, between patient ethnicities, or across age groups. Visualization of saliency maps and sample images provided insights into the mammographic features associated with AI-predicted cancer risk. Conclusion The developed AI tool showed good performance on a multisite, United Kingdom-specific dataset. Keywords: Deep Learning, Artificial Intelligence, Breast Cancer, Screening, Risk Prediction Supplemental material is available for this article. ©RSNA, 2024.
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- 2024
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