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In this research, canola meal was densified using bio-additives including alkali lignin, glycerol, and l -proline. The fuel pellet's formulation was optimized. The best fuel pellet demonstrated relaxed density and mechanical durability of 1015 kg/m3 and 99.0%, respectively. Synchrotron-based computer tomography technique indicated that lack of water in pellet formulation resulted in a twofold increase in pellet porosity. Thermogravimetric analysis showed that ignition temperature (240 °C) and burn-out temperature (640 °C) for fuel pellet were smaller than those for coal. Impacts of process parameters were evaluated on the quality of the gas product obtained from pellet's steam gasification and hydrothermal gasification. The gasification experiments showed production of untreated syngas with a suitable range of H2/CO molar ratio (1.3–1.6) using steam gasification. Hydro-thermal gasification produced a larger molar ratio of H2/CO (1.8–51.2) for the gas product. Modeling of pellet's steam gasification showed an excellent agreement with experimental results of steam gasification.

De-methyl esterification of homogalacturonan and subsequent cross-linking with Ca2+ is hypothesized to enhance the freezing survival of cold acclimated plants by reducing the porosity of primary cell walls. To test this theory, we collected leaf epidermal peels from non- (23/18 °C) and cold acclimated (2 weeks at 12/4 °C) Japanese bunching onion (Allium fistulosum L.). Cold acclimation enhanced the temperature at which half the cells survived freezing injury by 8 °C (LT50 =–20 °C), and reduced tissue permeability by 70-fold compared with non-acclimated epidermal cells. These effects were associated with greater activity of pectin methylesterase (PME) and a reduction in the methyl esterification of homogalacturonan. Non-acclimated plants treated with 50 mM CaCl2 accumulated higher concentrations of galacturonic acid, Ca2+ in the cell wall, and a lower number of visible cell wall pores compared with that observed in cold acclimated plants. Using cryo-microscopy, we observed that 50 mM CaCl2 treatment did not lower the LT50 of non-acclimated cells, but reduced the lethal intracellular ice nucleation to temperatures observed in cold acclimated epidermal cells. We postulate that the PME-homogalacturonan-mediated reduction in cell wall porosity is integral to intracellular freezing avoidance strategies in cold acclimated herbaceous cells.

Plant cell walls (CW) are composed mainly of cellulose–hemicellulose networks embedded in a pectin matrix. CW apposition, including papilla formation, is often associated with plant defence...

Agricultural residues can be converted to value-added products such as fuel pellets. Bio-based additives, including alkali lignin, glycerol and l -proline were used for binding formulation of canola hull fuel pellets. The binding formulation was optimized to produce pellet with the mechanical durability (by drop test) of 99%, relaxed density of 1,110 kg/m3, and energy density of 18,603 MJ/m3. l -proline showed the best performance in the enhancement of mechanical properties of pellet when compared with other two amino acids. Comparing with pure glycerol, use of crude glycerol decreased compression energy required for pelletization, but resultant pellet had lower tensile strength. SEM and light microscopy showed the effects of lacking moisture, lignin and l -proline in the formulation. Synchrotron-based computed tomography was used for 3D imaging of fuel pellets yielding estimated porosity values over a range of 1.3–5.7% for different fuel pellets. The effects of pelletization operating conditions were also investigated on the pellets.

Agricultural processing residues, as renewable sources of energy, can be converted to value-added products such as fuel pellets with the wide applications in the production of heat and power. In this research, densification/torrefaction of canola meal and canola hull was investigated. A bench-scale extruder was used for densification of canola hull and canola meal. Then, to increase the hydrophobicity and heating value of pellets, they were torrefied. For pelletization of canola meal, an increase in canola meal to water mass ratio resulted in an increase in the mechanical strength of pellets. Canola meal was also used to facilitate pelletization of canola hull. Co-pelletization of canola hull with canola meal was successful for canola hull mass percentage up to 60 wt% in the feedstock. In general, torrefied pellets showed lower moisture adsorption (up to 59%), higher carbon content (in the range of 21–25%), lower oxygen content (35–46%), and higher heating value (up to 22%) compared with their respective precursors. To study the effects of operating conditions and additives, different characterization techniques were used to evaluate the thermal, chemical, mechanical, and physical properties of pellets. Synchrotron-based computed tomography showed that after torrefaction, porosity increased by 10% for pellets from canola meal and increased by 22–30% for pellets prepared by co-pelletization. Addition of alkali lignin to canola meal precursor helped to increase the mechanical strength of torrefied pellet produced from canola meal. The use of binders such as alkali lignin and crude glycerol had no effect on the relaxed density of torrefied pellets and resulted in higher moisture adsorption.

The Indian MRO sector is expected to become Asia's center, but the lack of quality in aircraft maintenance training has become a major bottleneck for future development. This paper explores the summary of the prospects for the Indian MRO sector to maintain its $900 million USD business and to overcome the binding partnership that is dragging the development process. The needs of human factors in Indian aircraft maintenance programs and their effect on profitability and protection by maintenance are studied.

Advances in Infrared (IR) spectroscopies have entered a new era of research with applications in phytobiome, plant microbiome and health. Fusarium graminearum 3-ADON is the most aggressive mycotoxigenic chemotype causing Fusarium head blight (FHB) in cereals, while Sphaerodes mycoparasitica is the specific Fusarium mycoparasite with biotrophic lifestyle discovered in cereal seeds and roots. Fourier transform infrared (FTIR) spectroscopy analyses depicted shifts in the spectral peaks related to mycoparasitism mainly within the region of proteins, lipids, also indicating a link between carbohydrates and protein regions, involving potential phenolic compounds. Especially, S. mycoparasitica contributes to significant changes in lipid region 3050–2800 cm−1, while in the protein region, an increasing trend was observed for the peaks 1655–1638 cm−1 (amide I) and 1549–1548 cm−1 (amide II) with changes in indicative protein secondary structures. Besides, the peak extending on the region 1520–1500 cm−1 insinuates a presence of aromatic compounds in presence of mycoparasite on the F. graminearum root sample. Monitoring shift in improved seed germination, fungus-fungus interface through scanning electron microscopy (SEM) and confocal laser scanning microscopy (CLSM), and FTIR molecular signatures combined with principal component analysis (PCA) proved useful tools to detect an early mycoparasitism as a vital asset of the preventive biocontrol strategy against plant pathogens.

This view point focuses on increasing and retaining Indian MRO market within India by improving the maintenance standard through EASA approved maintenance organizations and by change in existing investment approach. An overview on MRO market demand and the market retention with respect to outsourced services during pre covid-19 is detailed. The existing standard of maintenance with respect to global standards was compared to identify the well-focused training need. Need of EASA framework implementation for maintenance training to improve existing training standard are detailed. Focus to improve leasing and investment approaches in MRO are discussed to retain and increase the MRO market. Effective business retention and focused growth to become a global MRO hub can be achieved by adopting EASA regulatory framework for maintenance training and MRO, supported by the developments in aircraft leasing sector. Addressing the EASA training need and leasing opportunities can be helpful in convincing authorities and market leaders to realize the potential of India to be a global MRO hub. This view point can be thought provoking in retaining the Indian MRO market by addressing the need of EASA standardization in maintenance training with respect to improve the maintenance quality and to attract investment and leasing. Ways of increasing the MRO business through change in existing aircraft leasing approach and need of EASA framework in maintenance training and standardization are provided to convince authorities and market leaders to realize that India can become future global MRO hub.

Clubroot [Plasmodiophora brassica] severity in canola (Brassica napus) can be suppressed by addition of boron (B), but excess B produces phytotoxicity. However, some lines of a closely related species, B. rapa, are relatively insensitive to high levels of B. Assessment of 150 accessions of B. napus and B. rapa treated with 0, 8 and 16 kg B ha-1 as disodium octaborate tetrahydrate (trade name Solubor) identified several lines that were relatively insensitive to high levels of B. In 2015, 88 lines were planted in a clubroot-infested plot in Ontario, Canada in a replicated split-plot design, where the subplot treatments were 8 kg ha-1 of B versus a non-treated control. Boron-insensitive lines generally had slightly lower clubroot severity than sensitive lines, even in the control with no added B. Application of B reduced clubroot slightly in the most sensitive lines, but produced a large and significant reduction in severity in the most insensitive lines. Assessment of five insensitive lines under controlled conditions supported the observation that application of B substantially reduced clubroot severity in insensitive lines. Comparison of two sensitive and two insensitive lines each of B. napus and B. rapa using Boron K-edge X-ray absorption near-edge structure (XANES) spectra from a synchrotron-based soft-X-ray beamline showed that some insensitive lines were able to extract B efficiently from a soil that contained very low levels of B. The spectra of sensitive and insensitive lines differed when additional B was applied, which demonstrated that the insensitive lines stored B (and other elements such as S and P) differently than the sensitive lines. Differences in the amount and type of storage likely affect the susceptibility to clubroot, and merits further study.

Despite the extensive use of synchrotron radiation in material and biomedical sciences, it has only recently been utilized to expand our understanding of plant responses to environmental stress. Recent advances have led to the development of phenotyping platforms to identify chemical and morphological differences in breeding plant material. While these methodologies are applicable for and tested with a variety of abiotic and biotic stresses, they are particularly useful as a first step to identify cold-induced chemical and morphological changes in plants. Here, we describe two methods to determine cold acclimation-induced changes at the cellular and tissue levels. First, we illustrate how to quantify and visualize changes in tissue chemistry using Fourier-transform infrared spectroscopy. Second, we describe how to nondestructively prepare, analyze, and interpret X-ray phase contrast images and render this data as two- or three-dimensional models. While these techniques utilize synchrotron radiation, the methodology and standard practices are applicable for handheld and laboratory bench-top equipment operating with conventional light sources.

Despite the extensive use of synchrotron radiation in material and biomedical sciences, it has only recently been utilized to expand our understanding of plant responses to environmental stress. Recent advances have led to the development of phenotyping platforms to identify chemical and morphological differences in breeding plant material. While these methodologies are applicable for and tested with a variety of abiotic and biotic stresses, they are particularly useful as a first step to identify cold-induced chemical and morphological changes in plants. Here, we describe two methods to determine cold acclimation-induced changes at the cellular and tissue levels. First, we illustrate how to quantify and visualize changes in tissue chemistry using Fourier-transform infrared spectroscopy. Second, we describe how to nondestructively prepare, analyze, and interpret X-ray phase contrast images and render this data as two- or three-dimensional models. While these techniques utilize synchrotron radiation, the methodology and standard practices are applicable for handheld and laboratory bench-top equipment operating with conventional light sources.

Direct evidence-based approaches are vital to evaluating newly proposed theories on the persistence of soil organic carbon and establishing the contributions of abiotic and biotic controls. Our primary goal was to directly identify the mechanisms of organic carbon stabilization in native-state, free soil microaggregates without disrupting the aggregate microstructure using scanning transmission x-ray microscopy coupled with near edge x-ray absorption fine structure spectroscopy (STXM-NEXAFS). The influence of soil management practices on microaggregate associated-carbon was also assessed. Free, stable soil microaggregates were collected from a tropical agro-ecosystem in Cruz Alta, Brazil. The long-term experimental plots (>25 years) comparing two tillage systems: no-till and till with a complex crop rotation. Based on simultaneously collected multi-elemental associations and speciation, STXM-NEXAFS successfully provided submicron level information on organo-mineral associations. Simple organic carbon sources were found preserved within microaggregates; some still possessing original morphology, suggesting that their stabilization was not entirely governed by the substrate chemistry. Bulk analysis showed higher and younger organic carbon in microaggregates from no-till systems than tilled systems. These results provide direct submicron level evidence that the surrounding environment is involved in stabilizing organic carbon, thus favoring newly proposed concepts on the persistence of soil organic carbon.

Fusarium head blight, caused primarily by Fusarium graminearum (Fg), is one of the most devastating diseases of wheat. Host resistance in wheat is classified into five types (Type-I to Type-V), and a majority of moderately resistant genotypes carry Type-II resistance (resistance to pathogen spread in the rachis) alleles, mainly from the Chinese cultivar Sumai 3. Histopathological studies in the past failed to identify the key tissue in the spike conferring resistance to pathogen spread, and most of the studies used destructive techniques, potentially damaging the tissue(s) under study. In the present study, nondestructive synchrotron-based phase contrast X-ray imaging and computed tomography techniques were used to confirm the part of the wheat spike conferring Type-II resistance to Fg spread, thus showcasing the application of synchrotron-based techniques to image host-pathogen interactions. Seven wheat genotypes of moderate resistance to Fusarium head blight were studied for changes in the void space volume fraction and grayscale/voxel intensity following Fg inoculation. Cell-wall biopolymeric compounds were quantified using Fourier-transform midinfrared spectroscopy for all genotype-treatment combinations. The study revealed that the rachilla and rachis nodes together are structurally important in conferring Type-II resistance. The structural reinforcement was not necessarily observed from lignin deposition but rather from an unknown mechanism.

Field pea (Pisum sativum), a major grain legume crop, is autogamous and adapted to temperate climates. The objectives of this study were to investigate effects of high temperature stress on stamen chemical composition, anther dehiscence, pollen viability, pollen interactions with pistil and ovules, and ovule growth and viability. Two cultivars ("CDC Golden" and "CDC Sage") were exposed to 24/18°C (day/night) continually or to 35/18°C for 4 or 7 days. Heat stress altered stamen chemical composition, with lipid composition of "CDC Sage" being more stable compared with "CDC Golden." Heat stress reduced pollen viability and the proportion of ovules that received a pollen tube. After 4 days at 35°C, pollen viability in flower buds decreased in "CDC Golden," but not in "CDC Sage." After 7 days, partial to full failure of anthers to dehisce resulted in subnormal pollen loads on stigmas. Although growth (ovule size) of fertilized ovules was stimulated by 35°C, heat stress tended to decrease ovule viability. Pollen appears susceptible to stress, but not many grains are needed for successful fertilization. Ovule fertilization and embryos are less susceptible to heat, but further research is warranted to link the exact degree of resilience to stress intensity.

Raffia palm fibers are potential reinforcement materials for making cost-effective polymer-based composite. This paper presents the results obtained from a study of physical, chemical, thermal and mechanical properties of raffia palm fibers (RPFs) derived from the raffia palm tree (Raphia farinifera). The as-received RPFs had their remnant binders manually removed and was subsequently cleaned in a 2% detergent solution before drying in an air oven at 70 °C for 24 h. Evaluation of the properties of the dried samples was carried out using a combination of characterization techniques including chemical composition determination, density measurement, moisture adsorption and water absorption measurements, tensile testing, scanning electron microscopy (SEM), differential scanning calorimetry (DSC), Raman spectroscopy, X-ray diffractometry, and Fourier transform infrared spectromicroscopy. The main constituents of RPFs were found to be cellulose, hemicellulose and lignin. The average diameter and average density were 1.53 ± 0.29 mm and 1.50 ± 0.01 g/cm3, respectively. The average breaking strength of the fibers ranged from 152 ± 22 to 270 ± 39 MPa; it did not vary significantly with fiber length and cross-head speed during tensile testing. The results of scanning electron microscopic investigation of the fibers showed that they comprise several elemental fibers which are tightly packed together with each having its own lumen. Synchrotron-based Fourier-transform infrared spectromicroscopy of a cross-section of the fiber showed that lignin is concentrated mostly on the outside while cellulose and pectin are concentrated in the mid-section. A two-stage water sorption behavior was observed for the fibers.

Soil salinity is a global concern and often the primary factor contributing to land degradation, limiting crop growth and production. Alfalfa (Medicago sativa L.) is a low input high value forage legume with a wide adaptation. Examining the tissue-specific responses to salt stress will be important to understanding physiological changes of alfalfa. The responses of two alfalfa cultivars (salt tolerant ‘Halo’, salt intolerant ‘Vernal’) were studied for 12 weeks in five gradients of salt stress in a sand based hydroponic system in the greenhouse. The accumulation and localization of elements and organic compounds in different tissues of alfalfa under salt stress were evaluated using synchrotron beamlines. The pattern of chlorine accumulation for ‘Halo’ was: root > stem ~ leaf at 8 dSm−1, and root ~ leaf > stem at 12 dSm−1, potentially preventing toxic ion accumulation in leaf tissues. In contrast, for ‘Vernal’, it was leaf > stem ~ root at 8 dSm−1 and leaf > root ~ stem at 12 dSm−1. The distribution of chlorine in ‘Halo’ was relatively uniform in the leaf surface and vascular bundles of the stem. Amide concentration in the leaf and stem tissues was greater for ‘Halo’ than ‘Vernal’ at all salt gradients. This study determined that low ion accumulation in the shoot was a common strategy in salt tolerant alfalfa up to 8 dSm−1 of salt stress, which was then replaced by shoot tissue tolerance at 12 dSm−1.

Arabidopsis eceriferum (cer) mutants with unique alterations in their rosette leaf cuticular wax accumulation and composition established by gas chromatography have been investigated using attenuated total reflection (ATR)-Fourier transform infrared (FTIR) spectroscopy in combination with univariate and multivariate analysis. Objectives of this study were to evaluate the utility of ATR-FTIR for detection of chemical diversity in leaf cuticles, obtain spectral profiles of cer mutants in comparison with the wild type, and identify changes in leaf cuticles caused by drought stress. FTIR spectra revealed both genotype- and treatment-dependent differences in the chemical make-up of Arabidopsis leaf cuticles. Drought stress caused specific changes in the integrated area of the CH3 peak, asymmetrical and symmetrical CH2 peaks, ester carbonyl peak and the peak area ratio of ester CO to CH2 asymmetrical vibration. CH3 peak positively correlated with the total wax accumulation. Thus, ATR-FTIR spectroscopy is a valuable tool that can advance our understanding of the role of cuticle chemistry in plant response to drought and allow selection of superior drought-tolerant varieties from large genetic resources.

Simple plant cell morphologies, such as cylindrical shoot cells, are determined by the extensibility pattern of the primary cell wall, which is thought to be largely dominated by cellulose microfibrils, but the mechanism leading to more complex shapes, such as the interdigitated patterns in the epidermis of many eudicotyledon leaves, is much less well understood. Details about the manner in which cell wall polymers at the periclinal wall regulate the morphogenetic process in epidermal pavement cells and mechanistic information about the initial steps leading to the characteristic undulations in the cell borders are elusive. Here, we used genetics and recently developed cell mechanical and imaging methods to study the impact of the spatio-temporal dynamics of cellulose and homogalacturonan pectin distribution during lobe formation in the epidermal pavement cells of Arabidopsis (Arabidopsis thaliana) cotyledons. We show that nonuniform distribution of cellulose microfibrils and demethylated pectin coincides with spatial differences in cell wall stiffness but may intervene at different developmental stages. We also show that lobe period can be reduced when demethyl-esterification of pectins increases under conditions of reduced cellulose crystallinity. Our data suggest that lobe initiation involves a modulation of cell wall stiffness through local enrichment in demethylated pectin, whereas subsequent increase in lobe amplitude is mediated by the stress-induced deposition of aligned cellulose microfibrils. Our results reveal a key role of noncellulosic polymers in the biomechanical regulation of cell morphogenesis.

The effect of microwave treatment to reduce the cooking times of five pulses, namely red lentil, chickpea, pigeon pea, mung bean, and pinto bean, were determined in this study. Pulses from 10 to 18% moisture contents were treated using 400 to 600 W microwaves for 14 to 56 s. The cooking times of microwave-treated pulses were significantly lower than that of the control samples. The lowest cooking time was observed for 18% moisture content chickpea and pigeon pea treated with 600 W for 56 s. The Fourier transform mid-infrared spectra in both lipids and fingerprint regions showed the macronutrients differences among the five pulses. Major changes were observed in the amide I region of microwave treated pulses. This effect of microwave treatment was higher in red lentil, chickpea, and mung bean than in pigeon pea and pinto bean at 10% moisture content. At 18% moisture content, the change of β-sheets to aggregates was observed in all pulses due to microwave treatment.

The carbon matrix in cell walls of lignocellulosic plants has high recalcitrance to chemical and biological decomposition. Thermal treatments, such as torrefaction and pyrolysis are therefore of in ...

Modern infrared (IR) spectroscopy and imaging has a wide range of applications in health and plant sciences. Initially, it was extensively used for the study of proteins, nucleotides, lipids and carbohydrates. With time, its use has extended to disease assessment to discriminate healthy and diseased samples on the basis of chemical changes. The application of an advanced focal plane array detector, which is able to scan a large area of samples in a short time, helps in investigating specific changes that could be correlated with different environmental stresses. An IR microscope connected with a synchrotron light source further enhances the lateral spatial resolution at diffraction limit because of the compact beam size. For example, synchrotron-based IR spectroscopy imaging in combination with multivariate statistical analysis has been proven to be a powerful non-destructive analytical tool to probe changes in plant cell wall composition/structure in response to biological processes and environme...

A cryo scanning transmission X-ray microscope, the cryo-STXM, has been designed and commissioned at the Canadian Light Source synchrotron. The instrument is designed to operate from 100 - 4000 eV (lambda = 12.4 - 0.31 nm). Users can insert a previously frozen sample, through a load lock, and rotate it plus minus 70 degrees in the beam to collect tomographic data sets. The sample can be maintained for extended periods at 92 K primarily to suppress radiation damage, and a pressure on the order of 10-9 Torr to suppress sample contamination. The achieved spatial resolution (30 nm) and spectral resolution (0.1 eV) are similar to other current soft X-ray STXMs, as demonstrated by measurements on known samples and test patterns. The data acquisition efficiency is significantly more favorable for both imaging and tomography. 2D images, 3D tomograms and 4D chemical maps of automotive hydrogen fuel cell thin sections are presented to demonstrate current performance and new capabilities, namely cryo-spectrotomography in the soft X-ray region., 56 pages

ATR-FTIR spectroscopy in combination with uni- and multivariate analysis was used to quantify the spectral–chemical composition of the leaf cuticle of pea, investigating the effects of variety and heat stress. Field pea (Pisum sativum L.) is sensitive to heat stress and our goal was to improve canopy cooling and flower retention by investigating the protective role of lipid-related compounds in leaf cuticle, and to use results in the future to identify heat resistant genotypes. The objective was to use Attenuated Total Reflection (ATR)-Fourier Transform Infrared (FTIR) spectroscopy, a non-invasive technique, to investigate and quantify changes in adaxial cuticles of fresh leaves of pea varieties that were subjected to heat stress. Eleven varieties were grown under control (24/18 °C day/night) and heat stress conditions (35/18 °C day/night, for 5 days at the early flowering stage). These 11 had significant spectral differences in the integrated area of the main lipid region, CH2 region, CH3 peak, asymmetric and symmetric CH2 peaks, ester carbonyl peak, and the peak area ratio of CH2 to CH3 and ester carbonyl to CH2 asymmetric peak, indicating that cuticles had spectral–chemical diversity of waxes, cutin, and polysaccharides. Results indicated considerable diversity in spectral–chemical makeup of leaf cuticles within commercially available field pea varieties and they responded differently to high growth temperature, revealing their diverse potential to resist heat stress. The ATR-FTIR spectral technique can, therefore, be further used as a medium-throughput approach for rapid screening of superior cultivars for heat tolerance.

In the present study, FTIR spectroscopy and hyperspectral imaging was introduced as a non-destructive, sensitive-reliable tool for assessing the tripartite kernel-fungal endophyte environment interaction. Composition of coleorhizae of Triticum durum was studied under ambient and drought stress conditions. The OH-stretch IR absorption spectrum suggests that the water-deficit was possibly improved or moderated by kernel’s endophytic partner. The OH-stretch frequency pattern coincides with other (growth and stress) related molecular changes. Analysis of lipid (3100–2800 cm−1) and protein (1700–1550 cm−1) regions seems to demonstrate that drought has a positive impact on lipids. The fungal endosymbiont direct contact with kernel during germination had highest effect on both lipid and protein (Amide I and II) groups, indicating an increased stress resistance in inoculated kernel. Compared to the indirect kernel-fungus interaction and to non-treated kernels (control), direct interaction produced highest effect on lipids. Among treatments, the fingerprint region (1800–800 cm−1) and SEM images indicated an important shift in glucose oligosaccharides, possibly linked to coleorhiza-polymer layer disappearance. Acquired differentiation in coleorhiza composition of T. durum, between ambient and drought conditions, suggests that FTIR spectroscopy could be a promising tool for studying endosymbiont-plant interactions within a changing environment.

Fusarium head blight, caused primarily by Fusarium graminearum (Fg), is one of the most devastating diseases of wheat. Host resistance in wheat is classified into five types (Type-I to Type-V), and a majority of moderately resistant genotypes carry Type-II resistance (resistance to pathogen spread in the rachis) alleles, mainly from the Chinese cultivar Sumai 3. Histopathological studies in the past failed to identify the key tissue in the spike conferring resistance to pathogen spread, and most of the studies used destructive techniques, potentially damaging the tissue(s) under study. In the present study, nondestructive synchrotron-based phase contrast X-ray imaging and computed tomography techniques were used to confirm the part of the wheat spike conferring Type-II resistance to Fg spread, thus showcasing the application of synchrotron-based techniques to image host-pathogen interactions. Seven wheat genotypes of moderate resistance to Fusarium head blight were studied for changes in the void space volume fraction and grayscale/voxel intensity following Fg inoculation. Cell-wall biopolymeric compounds were quantified using Fourier-transform midinfrared spectroscopy for all genotype-treatment combinations. The study revealed that the rachilla and rachis nodes together are structurally important in conferring Type-II resistance. The structural reinforcement was not necessarily observed from lignin deposition but rather from an unknown mechanism.

Pea (Pisum sativum L.) is a major legume crop grown in a semi-arid climate in Western Canada, where heat stress affects pollination, seed set and yield. Seed set and pod growth characteristics, along with in vitro percentage pollen germination, pollen tube growth and pollen surface composition, were measured in two pea cultivars (CDC Golden and CDC Sage) subjected to five maximum temperature regimes ranging from 24 to 36 °C. Heat stress reduced percentage pollen germination, pollen tube length, pod length, seed number per pod, and the seed-ovule ratio. Percentage pollen germination of CDC Sage was greater than CDC Golden at 36 °C. No visible morphological differences in pollen grains or the pollen surface were observed between the heat and control-treated pea. However, pollen wall (intine) thickness increased due to heat stress. Mid-infrared attenuated total reflectance (MIR-ATR) spectra revealed that the chemical composition (lipid, proteins and carbohydrates) of each cultivar's pollen grains responded differently to heat stress. The lipid region of the pollen coat and exine of CDC Sage was more stable compared with CDC Golden at 36 °C. Secondary derivatives of ATR spectra indicated the presence of two lipid types, with different amounts present in pollen grains from each cultivar.

Clubroot disease is a serious threat to canola production in western Canada and many parts of the world. Rcr1 is a clubroot resistance (CR) gene identified recently and its molecular mechanisms in mediating CR have been studied using several omics approaches. The current study aimed to characterize the biochemical changes in the cell wall of canola roots connecting to key molecular mechanisms of this CR gene identified in prior studies using Fourier transform infrared (FTIR) spectroscopy. The expression of nine genes involved in phenylpropanoid metabolism was also studied using qPCR. Between susceptible (S) and resistance (R) samples, the most notable biochemical changes were related to an increased biosynthesis of lignin and phenolics. These results were supported by the transcription data on higher expression of BrPAL1. The up-regulation of PAL is indicative of an inducible defence response conferred by Rcr1; the activation of this basal defence gene via the phenylpropanoid pathway may contribute to clubroot resistance conferred by Rcr1. The data indicate that several cell-wall components, including lignin and pectin, may play a role in defence responses against clubroot. Principal components analysis of FTIR data separated non-inoculated samples from inoculated samples, but not so much between inoculated S and inoculated R samples. It is also shown that FTIR spectroscopy can be a useful tool in studying plant-pathogen interaction at cellular levels.

A new scanning transmission X-ray microscope (STXM) optimized for cryo-spectro-tomography with soft X-rays has been designed, built and commissioned at Canadian Light Source (CLS) beamline 10ID1 (130-2700 eV). It is controlled via a new python-based software package, pySTXM. A liquid N2 goniometer (Gatan 630, -80° to 80°), mounted on a computer controlled (x,y,Theta) tilt stage allows for spectro-tomographic measurements at cryogenic temperatures (-180°C) which reduces radiation damage. The CLS cryo-STXM is unique among the set of soft X-ray STXMs currently installed around the world. Details of the cryo-STXM design and examples of its performance will be presented.