223 results on '"Christian A. Smith"'
Search Results
2. Successful Wildlife Conservation Requires Good Governance
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Emily F. Pomeranz, Darragh Hare, Daniel J. Decker, Ann B. Forstchen, Cynthia A. Jacobson, Christian A. Smith, and Michael V. Schiavone
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wildlife conservation ,wildlife management ,program evaluation ,public trust ,good governance ,relevancy ,General. Including nature conservation, geographical distribution ,QH1-199.5 - Abstract
Public wildlife management in the United States is transforming as agencies seek relevancy to broader constituencies. State agencies in the United States, while tasked with conserving wildlife for all beneficiaries of the wildlife trust, have tended to manage for a limited range of benefits in part due to a narrow funding model heavily dependent on hunting, fishing, and trapping license buyers. To best meet the needs, interests, and concerns of a broader suite of beneficiaries, agencies will need to reconsider how priorities for management are set. This presents an opportunity for conservation program design and evaluation to be elevated in importance. We argue that success in wildlife conservation in the U.S. requires assessment of both decision-making processes and management results in relation to four questions: conservation of what, under what authority, for what purposes, and for whom?
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- 2021
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3. A functional genomics approach to identify pathways of drug resistance in medulloblastoma
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Kelsey C. Bertrand, Claudia C. Faria, Patryk Skowron, Amanda Luck, Livia Garzia, Xiaochong Wu, Sameer Agnihotri, Christian A. Smith, Michael D. Taylor, Stephen C. Mack, and James T. Rutka
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Cancer ,Brain tumor ,Medulloblastoma ,Drug resistance ,Functional genomics ,Transposon mutagenesis ,Neurology. Diseases of the nervous system ,RC346-429 - Published
- 2018
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4. High-resolution Whole-Genome Analysis of Skull Base Chordomas Implicates FHIT Loss in Chordoma Pathogenesis
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Roberto Jose Diaz, Mustafa Guduk, Rocco Romagnuolo, Christian A. Smith, Paul Northcott, David Shih, Fitim Berisha, Adrienne Flanagan, David G. Munoz, Michael D. Cusimano, M. Necmettin Pamir, and James T. Rutka
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Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Chordoma is a rare tumor arising in the sacrum, clivus, or vertebrae. It is often not completely resectable and shows a high incidence of recurrence and progression with shortened patient survival and impaired quality of life. Chemotherapeutic options are limited to investigational therapies at present. Therefore, adjuvant therapy for control of tumor recurrence and progression is of great interest, especially in skull base lesions where complete tumor resection is often not possible because of the proximity of cranial nerves. To understand the extent of genetic instability and associated chromosomal and gene losses or gains in skull base chordoma, we undertook whole-genome single-nucleotide polymorphism microarray analysis of flash frozen surgical chordoma specimens, 21 from the clivus and 1 from C1 to C2 vertebrae. We confirm the presence of a deletion at 9p involving CDKN2A, CDKN2B, and MTAP but at a much lower rate (22%) than previously reported for sacral chordoma. At a similar frequency (21%), we found aneuploidy of chromosome 3. Tissue microarray immunohistochemistry demonstrated absent or reduced fragile histidine triad (FHIT) protein expression in 98% of sacral chordomas and 67%of skull base chordomas. Our data suggest that chromosome 3 aneuploidy and epigenetic regulation of FHIT contribute to loss of the FHIT tumor suppressor in chordoma. The finding that FHIT is lost in a majority of chordomas provides new insight into chordoma pathogenesis and points to a potential new therapeutic target for this challenging neoplasm.
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- 2012
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5. The Role of Fascin in the Migration and Invasiveness of Malignant Glioma Cells
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Jeong Hyun Hwang, Christian A. Smith, Bodour Salhia, and James T. Rutka
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Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Malignant glioma is the most common primary brain tumor, and its ability to invade the surrounding brain parenchyma is a leading cause of tumor recurrence and treatment failure. Whereas the molecular mechanisms of glioma invasion are incompletely understood, there is growing evidence that cytoskeletal-matrix interactions contribute to this process. Fascin, an actin-bundling protein, induces parallel actin bundles in cell protrusions and increases cell motility in multiple human malignancies. The role of fascin in glioma invasion remains unclear. We demonstrate that fascin is expressed in a panel of human malignant glioma cell lines, and downregulation of fascin expression in glioma cell lines by small interfering RNA (siRNA) is associated with decreased cellular attachment to extracellular matrix (ECM) and reduced migration. Using immunofluorescence analysis, we show that fascin depletion results in a reduced number of filopodia as well as altered glioma cell shape. In vitro invasiveness of U251, U87, and SNB19 glioma cells was inhibited by fascin siRNA treatment by 52.2%, 40.3%, and 23.8% respectively. Finally, we show a decreased invasiveness of U251-GFP cells by fascin knockdown in an ex vivo rat brain slice model system. This is the first study to demonstrate a role for fascin in glioma cell morphology, motility, and invasiveness.
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- 2008
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6. The For-Profit Side of Public U: University Contracts with Online Program Managers
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Laura T. Hamilton, Heather Daniels, Christian Michael Smith, and Charlie Eaton
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Social Sciences ,Sociology (General) ,HM401-1281 - Abstract
Online enrollments in public universities have soared, in part because of universities’ increasing reliance on for-profit online program managers (OPMs) for everything from instructional design to student recruitment. However, scholarship has indicated that OPMs may play a role in producing predatory forms of inclusion in higher education for marginalized students. To identify mechanisms through which this might occur, the authors conduct a mixed-methods analysis of 161 contracts between OPMs and two- and four-year public universities, an original database of third-party financing structure, and university webpages. The analysis identifies several contract features—targeting, extraction, opacity, and captivity—that may help concentrate marginalized students in extractive or exploitative online programs at public universities. The authors also show that OPMs funded by private equity or venture capital are most likely to include contract features that incentivize aggressive revenue production and promote the recruitment of marginalized students in online, but not in-person, programs.
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- 2024
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7. Size and Distribution of Parr Produced from Natural‐ and <scp>Hatchery‐Origin</scp> Steelhead Spawning Naturally in a Small Pacific Northwest Coastal Stream
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Benjamen M. Kennedy, Matt J. Smith, John S. A. Holmes, Roger P. Root, Christian T. Smith, and Douglas P. Peterson
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Aquatic Science ,Ecology, Evolution, Behavior and Systematics - Published
- 2022
8. P2RY2-AKT activation is a therapeutically actionable consequence of XPO1 inhibition in acute myeloid leukemia
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Kevin H. Lin, Justine C. Rutter, Abigail Xie, Shane T. Killarney, Camille Vaganay, Chaima Benaksas, Frank Ling, Gaetano Sodaro, Paul-Arthur Meslin, Christopher F. Bassil, Nina Fenouille, Jacob Hoj, Rachel Washart, Hazel X. Ang, Christian Cerda-Smith, Paul Chaintreuil, Arnaud Jacquel, Patrick Auberger, Antoine Forget, Raphael Itzykson, Min Lu, Jiaxing Lin, Mariaelena Pierobon, Zhecheng Sheng, Xinghai Li, Ashutosh Chilkoti, Kouros Owzar, David A. Rizzieri, Timothy S. Pardee, Lina Benajiba, Emanuel Petricoin, Alexandre Puissant, and Kris C. Wood
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Receptors, Purinergic P2Y2 ,Leukemia, Myeloid, Acute ,Mice ,Cancer Research ,Oncology ,Antineoplastic Combined Chemotherapy Protocols ,Animals ,Receptors, Cytoplasmic and Nuclear ,Karyopherins ,Proto-Oncogene Proteins c-akt ,United States - Abstract
Selinexor is a first-in-class inhibitor of the nuclear exportin XPO1 that was recently approved by the US Food and Drug Administration for the treatment of multiple myeloma and diffuse large B-cell lymphoma. In relapsed/refractory acute myeloid leukemia (AML), selinexor has shown promising activity, suggesting that selinexor-based combination therapies may have clinical potential. Here, motivated by the hypothesis that selinexor's nuclear sequestration of diverse substrates imposes pleiotropic fitness effects on AML cells, we systematically catalog the pro- and anti-fitness consequences of selinexor treatment. We discover that selinexor activates PI3Kγ-dependent AKT signaling in AML by upregulating the purinergic receptor P2RY2. Inhibiting this axis potentiates the anti-leukemic effects of selinexor in AML cell lines, patient-derived primary cultures and multiple mouse models of AML. In a syngeneic, MLL-AF9-driven mouse model of AML, treatment with selinexor and ipatasertib outperforms both standard-of-care chemotherapy and chemotherapy with selinexor. Together, these findings establish drug-induced P2RY2-AKT signaling as an actionable consequence of XPO1 inhibition in AML.
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- 2022
9. Diversity, Identity, and Data
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Chad M. Topaz, Heather Z. Brooks, Unchitta Kan, Björn Sandstede, and Christian Michael Smith
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While quantitative approaches cannot replace disciplinary insights from the social sciences and humanities, they can sometimes provide new perspectives. Building upon research from psychology and organizational theory that demonstrates how interacting groups may benefit both from diversity and from shared identity, we present a mathematical framework to explore the interplay of these collective attributes. We define intersecting diversity to capture the distribution of multidimensional identity traits and shared identity to describe the extent to which traits are shared amongst individuals. Although these two quantities are theoretically independent, we find a strong negative correlation between them in two sample data sets: principal creative contributors to Hollywood box office movies and American Community Survey data on state populations. This apparent trade-off between group diversity and shared identity poses a dilemma as both attributes are beneficial for group functioning.
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- 2023
10. Promising or Predatory? Online Education in Non-Profit and For-Profit Universities
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Christian Michael Smith, Amber D Villalobos, Laura T Hamilton, and Charlie Eaton
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History ,Sociology and Political Science ,Anthropology - Abstract
Online education is a rapidly growing segment of the postsecondary system, and recent growth is concentrated at non-profit universities. Research shows that Black and low-income students are disproportionately represented in online programs; however, research on the outcomes of exclusively online education, especially at four-year non-profit universities, has been limited. Two narratives have emerged about the consequences of the access that online education provides: one describing it as promising and the other describing it as predatory. We harness both institution-level data and individual-level data to intervene in this debate. We show that online education is related to worse educational outcomes in non-profit and for-profit sectors, including lower retention and graduation rates. A sensitivity analysis suggests that selection into online education is unlikely to explain these results. Attending online is also related to some less desirable student loan repayment outcomes across sectors. Our results suggest that online education is a form of “predatory inclusion,” in that access is coupled with increased risks for students relative to comparable peers attending in-person. In light of our findings, we propose that the provision of online education by for-profit entities—even in the non-profit sector—may play a central role in producing poor student outcomes.
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- 2023
11. Suplemental Figure Legends from PINK1 Is a Negative Regulator of Growth and the Warburg Effect in Glioblastoma
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James T. Rutka, Gelareh Zadeh, Michael D. Taylor, William L. Stanford, Cynthia Hawkins, Gregory N. Fuller, Paul S. Mischel, Michael S. Taccone, Vijay Ramaswamy, Patricia Rakopoulos, Danielle Mackenzie, Stacey-Lynn Krumholtz, Christian A. Smith, Alan Chalil, Rob A. Cairns, Susan Younger, Marc Remke, Xi Huang, Brian Golbourn, and Sameer Agnihotri
- Abstract
Suplemental Figure Legends for supplemental data
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- 2023
12. Supplemental Figures from PINK1 Is a Negative Regulator of Growth and the Warburg Effect in Glioblastoma
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James T. Rutka, Gelareh Zadeh, Michael D. Taylor, William L. Stanford, Cynthia Hawkins, Gregory N. Fuller, Paul S. Mischel, Michael S. Taccone, Vijay Ramaswamy, Patricia Rakopoulos, Danielle Mackenzie, Stacey-Lynn Krumholtz, Christian A. Smith, Alan Chalil, Rob A. Cairns, Susan Younger, Marc Remke, Xi Huang, Brian Golbourn, and Sameer Agnihotri
- Abstract
Supplemental Figure 1: Related to Figure 1: Characterization of Gene-Trapped Clones Supplemental Figure 2 Related to Figure 2: PINK1 alters normal astrocyte metabolism Supplemental Figure 3 Related to Figure 2: PINK1 alters normal astrocyte metabolism Supplemental Figure 4: Related to Figure 3: PINK1 alters normal astrocyte metabolism and stabilizes HIF1a Supplemental Figure 5: Related to Figure 3: PINK1 overexpression stops GBM cell growth and inhibits glycolysis. Supplemental Figure 6: Related to Figure 3: PINK1 overexpression inhibits glycolysis. Supplemental Figure 7: Related to Figure 3: PINK1 overexpression inhibits glycolysis. Supplemental Figure 8: Related to Figure 4: Selective targeting in PINK1 expressing GBM cells leads to reduced viability Supplemental Figure 9: Related to Figure 4: Targeting of PINK1 in GBM cells leads to reduced colony formation and caspase activity Supplemental Figure 10: Related to Figure 5 and 6. PINK1 expression in vivo. Supplemental Table 1: Genes identified from gene-trap screen.
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- 2023
13. Data from PINK1 Is a Negative Regulator of Growth and the Warburg Effect in Glioblastoma
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James T. Rutka, Gelareh Zadeh, Michael D. Taylor, William L. Stanford, Cynthia Hawkins, Gregory N. Fuller, Paul S. Mischel, Michael S. Taccone, Vijay Ramaswamy, Patricia Rakopoulos, Danielle Mackenzie, Stacey-Lynn Krumholtz, Christian A. Smith, Alan Chalil, Rob A. Cairns, Susan Younger, Marc Remke, Xi Huang, Brian Golbourn, and Sameer Agnihotri
- Abstract
Proliferating cancer cells are characterized by high rates of glycolysis, lactate production, and altered mitochondrial metabolism. This metabolic reprogramming provides important metabolites for proliferation of tumor cells, including glioblastoma. These biological processes, however, generate oxidative stress that must be balanced through detoxification of reactive oxygen species (ROS). Using an unbiased retroviral loss-of-function screen in nontransformed human astrocytes, we demonstrate that mitochondrial PTEN-induced kinase 1 (PINK1) is a regulator of the Warburg effect and negative regulator of glioblastoma growth. We report that loss of PINK1 contributes to the Warburg effect through ROS-dependent stabilization of hypoxia-inducible factor-1A and reduced pyruvate kinase muscle isozyme 2 activity, both key regulators of aerobic glycolysis. Mechanistically, PINK1 suppresses ROS and tumor growth through FOXO3a, a master regulator of oxidative stress and superoxide dismutase 2. These findings highlight the importance of PINK1 and ROS balance in normal and tumor cells. PINK1 loss was observed in a significant number of human brain tumors including glioblastoma (n > 900) and correlated with poor patient survival. PINK1 overexpression attenuates in vivo glioblastoma growth in orthotopic mouse xenograft models and a transgenic glioblastoma model in Drosophila. Cancer Res; 76(16); 4708–19. ©2016 AACR.
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- 2023
14. Suplemental methods from PINK1 Is a Negative Regulator of Growth and the Warburg Effect in Glioblastoma
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James T. Rutka, Gelareh Zadeh, Michael D. Taylor, William L. Stanford, Cynthia Hawkins, Gregory N. Fuller, Paul S. Mischel, Michael S. Taccone, Vijay Ramaswamy, Patricia Rakopoulos, Danielle Mackenzie, Stacey-Lynn Krumholtz, Christian A. Smith, Alan Chalil, Rob A. Cairns, Susan Younger, Marc Remke, Xi Huang, Brian Golbourn, and Sameer Agnihotri
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Suplemental methods for experiments appearing in supplemental data and expanded details from methods in main manuscript.
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- 2023
15. Supplementary Figure S5 from Foretinib Is Effective Therapy for Metastatic Sonic Hedgehog Medulloblastoma
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James T. Rutka, Michael D. Taylor, Christian A. Smith, Andrey Korshunov, Marcel Kool, Sidney E. Croul, Stefan M. Pfister, Paul A. Northcott, Martin Post, Leonardo Ermini, Denis Reynaud, Michael Leadley, Xin Wang, Stephen C. Mack, Vijay Ramaswamy, Livia Garzia, Xiaochong Wu, Samantha Olsen, Nesrin Sabha, Amanda Luck, Sameer Agnihotri, Roberto J. Diaz, Marc Remke, Adrian M. Dubuc, Brian J. Golbourn, and Claudia C. Faria
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Supplementary Figure S5. PDGFRÃ? pathway inhibition in foretinib treated Daoy and D425 medulloblastoma cells
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- 2023
16. Supplementary Table S1 from Foretinib Is Effective Therapy for Metastatic Sonic Hedgehog Medulloblastoma
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James T. Rutka, Michael D. Taylor, Christian A. Smith, Andrey Korshunov, Marcel Kool, Sidney E. Croul, Stefan M. Pfister, Paul A. Northcott, Martin Post, Leonardo Ermini, Denis Reynaud, Michael Leadley, Xin Wang, Stephen C. Mack, Vijay Ramaswamy, Livia Garzia, Xiaochong Wu, Samantha Olsen, Nesrin Sabha, Amanda Luck, Sameer Agnihotri, Roberto J. Diaz, Marc Remke, Adrian M. Dubuc, Brian J. Golbourn, and Claudia C. Faria
- Abstract
Supplementary Table S1. Foretinib concentrations in mouse brain, mouse plasma and the brain-plasma ratio
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- 2023
17. Supplementary Figures 1-5 from An Epigenetic Genome-Wide Screen Identifies SPINT2 as a Novel Tumor Suppressor Gene in Pediatric Medulloblastoma
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James T. Rutka, Michael D. Taylor, Christian A. Smith, Sidney E. Croul, Todd G. Mainprize, Yukiko Nakahara, Young Shin Ra, Paul A. Northcott, and Paul N. Kongkham
- Abstract
Supplementary Figures 1-5 from An Epigenetic Genome-Wide Screen Identifies SPINT2 as a Novel Tumor Suppressor Gene in Pediatric Medulloblastoma
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- 2023
18. Data from An Epigenetic Genome-Wide Screen Identifies SPINT2 as a Novel Tumor Suppressor Gene in Pediatric Medulloblastoma
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James T. Rutka, Michael D. Taylor, Christian A. Smith, Sidney E. Croul, Todd G. Mainprize, Yukiko Nakahara, Young Shin Ra, Paul A. Northcott, and Paul N. Kongkham
- Abstract
Medulloblastoma (MB) is a malignant cerebellar tumor that occurs primarily in children. The hepatocyte growth factor (HGF)/MET pathway has an established role in both normal cerebellar development as well as the development and progression of human brain tumors, including MB. To identify novel tumor suppressor genes involved in MB pathogenesis, we performed an epigenome-wide screen in MB cell lines, using 5-aza-2′deoxycytidine to identify genes aberrantly silenced by promoter hypermethylation. Using this technique, we identified an inhibitor of HGF/MET signaling, serine protease inhibitor kunitz-type 2 (SPINT2/HAI-2), as a putative tumor suppressor silenced by promoter methylation in MB. In addition, based on single nucleotide polymorphism array analysis in primary MB samples, we identified hemizygous deletions targeting the SPINT2 locus in addition to gains on chromosome 7 encompassing the HGF and MET loci. SPINT2 gene expression was down-regulated and MET expression was up-regulated in 73.2% and 45.5% of tumors, respectively, by quantitative real-time PCR. SPINT2 promoter methylation was detected in 34.3% of primary MBs examined by methylation-specific PCR. SPINT2 reexpression in MB cell lines reduced proliferative capacity, anchorage independent growth, cell motility in vitro, and increased overall survival times in vivo in a xenograft model (P < 0.0001). Taken together, these data support the role of SPINT2 as a putative tumor suppressor gene in MB, and further implicate dysregulation of the HGF/MET signaling pathway in the pathogenesis of MB. [Cancer Res 2008;68(23):9945–53]
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- 2023
19. Supplementary Methods and Figure Legends from Foretinib Is Effective Therapy for Metastatic Sonic Hedgehog Medulloblastoma
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James T. Rutka, Michael D. Taylor, Christian A. Smith, Andrey Korshunov, Marcel Kool, Sidney E. Croul, Stefan M. Pfister, Paul A. Northcott, Martin Post, Leonardo Ermini, Denis Reynaud, Michael Leadley, Xin Wang, Stephen C. Mack, Vijay Ramaswamy, Livia Garzia, Xiaochong Wu, Samantha Olsen, Nesrin Sabha, Amanda Luck, Sameer Agnihotri, Roberto J. Diaz, Marc Remke, Adrian M. Dubuc, Brian J. Golbourn, and Claudia C. Faria
- Abstract
Supplementary Methods and Figure Legends
- Published
- 2023
20. Supplementary Figure 7 from An Epigenetic Genome-Wide Screen Identifies SPINT2 as a Novel Tumor Suppressor Gene in Pediatric Medulloblastoma
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James T. Rutka, Michael D. Taylor, Christian A. Smith, Sidney E. Croul, Todd G. Mainprize, Yukiko Nakahara, Young Shin Ra, Paul A. Northcott, and Paul N. Kongkham
- Abstract
Supplementary Figure 7 from An Epigenetic Genome-Wide Screen Identifies SPINT2 as a Novel Tumor Suppressor Gene in Pediatric Medulloblastoma
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- 2023
21. Supplementary Figure 6 from An Epigenetic Genome-Wide Screen Identifies SPINT2 as a Novel Tumor Suppressor Gene in Pediatric Medulloblastoma
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James T. Rutka, Michael D. Taylor, Christian A. Smith, Sidney E. Croul, Todd G. Mainprize, Yukiko Nakahara, Young Shin Ra, Paul A. Northcott, and Paul N. Kongkham
- Abstract
Supplementary Figure 6 from An Epigenetic Genome-Wide Screen Identifies SPINT2 as a Novel Tumor Suppressor Gene in Pediatric Medulloblastoma
- Published
- 2023
22. MCB-613 exploits a collateral sensitivity in drug resistantEGFR-mutant non-small cell lung cancer through covalent inhibition of KEAP1
- Author
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Christopher F. Bassil, Gray R. Anderson, Benjamin Mayro, Kayleigh N. Askin, Peter S. Winter, Samuel Gruber, Tierney M. Hall, Jacob P. Hoj, Christian Cerda-Smith, Haley M. Hutchinson, Shane T. Killarney, Katherine R. Singleton, Li Qin, Kévin Jubien-Girard, Cécile Favreau, Anthony R. Martin, Guillaume Robert, Rachid Benhida, Patrick Auberger, Ann Marie Pendergast, David M. Lonard, Alexandre Puissant, and Kris C. Wood
- Abstract
Targeted therapies have revolutionized cancer chemotherapy. Unfortunately, most patients develop multifocal resistance to these drugs within a matter of months. Here, we used a high-throughput phenotypic small molecule screen to identify MCB-613 as a compound that selectively targetsEGFR-mutant, EGFR inhibitor-resistant non-small cell lung cancer (NSCLC) cells harboring diverse resistance mechanisms. Subsequent proteomic and functional genomic screens involving MCB-613 identified its target in this context to be KEAP1, revealing that this gene is selectively essential in the setting of EGFR inhibitor resistance. In-depth molecular characterization demonstrated that (1) MCB-613 binds KEAP1 covalently; (2) a single molecule of MCB-613 is capable of bridging two KEAP1 monomers together; and, (3) this modification interferes with the degradation of canonical KEAP1 substrates such as NRF2. Surprisingly, NRF2 knockout sensitizes cells to MCB-613, suggesting that the drug functions through modulation of an alternative KEAP1 substrate. Together, these findings advance MCB-613 as a new tool for exploiting the selective essentiality of KEAP1 in drug-resistant,EGFR-mutant NSCLC cells.
- Published
- 2023
23. Mixed Signals? Economically (Dis)advantaged Students’ College Attendance under Mandatory College and Career Readiness Assessments
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Christian Michael Smith and Noah Hirschl
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Education - Abstract
In 2015, Wisconsin began mandating the ACT college entrance exam and the WorkKeys career readiness assessment. With population-level data and several quasi-experimental designs, we assess how this policy affected college attendance. We estimate a positive policy effect for middle/high-income students, no effect for low-income students, and greater effects at high schools that had lower ACT participation before the policy. We further find little evidence that being deemed college-ready by one’s ACT scores or career-ready by one’s WorkKeys scores affects college attendance probabilities. Pragmatically, the findings highlight the policy’s excellence and equity consequences, which are complex given that the policy has principally helped advantaged students. Theoretically, the findings shed light on students’ (dis)inclinations to update educational beliefs in light of new signals.
- Published
- 2022
24. Advanced Placement Gatekeeping and Racialized Tracking
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Noah Hirschl and Christian Michael Smith
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Sociology and Political Science ,Education - Abstract
Racialized tracking is central to sociological explanations for racially stratified educational outcomes. However, school officials’ decision-making is of debated importance for explaining racialized tracking. We contribute to this literature by examining the effects of schools’ enrollment policies for Advanced Placement (AP) courses. Using a unique combination of school survey data and administrative data from Wisconsin, we examine what happens to racial inequality in AP participation when school officials enforce performance-based selection criteria, which we call “course gatekeeping.” We find that course gatekeeping has racially disproportionate effects. Although racialized differences in prior achievement partially explain the especially large negative effects among students of color, course gatekeeping producesBlack-white and Hispanic-white disparities in participation even among students with similar, relatively low prior achievement. We further find that course gatekeeping has longer-run effects, particularly discouraging Black and Asian or Pacific Islander students from attending highly selective four-year colleges.
- Published
- 2023
25. Modeling human brain tumors in flies, worms, and zebrafish: From proof of principle to novel therapeutic targets
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Christian A. Smith, Hidehiro Okura, James T. Rutka, Madeline Hayes, Michael S. Taccone, Uswa Shahzad, Xi Huang, W. Brent Derry, Joji Ishida, Stacey Krumholtz, Julia Edgar, Kyle Gouveia, Sachin Kumar, Coco Mine, and Michael D. Taylor
- Subjects
Cancer Research ,High-throughput screening ,Cell ,Danio ,Review ,Computational biology ,Mice ,03 medical and health sciences ,0302 clinical medicine ,RNA interference ,medicine ,Animals ,Humans ,Caenorhabditis elegans ,Zebrafish ,030304 developmental biology ,0303 health sciences ,biology ,Brain Neoplasms ,biology.organism_classification ,3. Good health ,Drosophila melanogaster ,medicine.anatomical_structure ,Oncology ,030220 oncology & carcinogenesis ,Neurology (clinical) ,Signal transduction ,Signal Transduction - Abstract
For decades, cell biologists and cancer researchers have taken advantage of non-murine species to increase our understanding of the molecular processes that drive normal cell and tissue development, and when perturbed, cause cancer. The advent of whole-genome sequencing has revealed the high genetic homology of these organisms to humans. Seminal studies in non-murine organisms such as Drosophila melanogaster, Caenorhabditis elegans, and Danio rerio identified many of the signaling pathways involved in cancer. Studies in these organisms offer distinct advantages over mammalian cell or murine systems. Compared to murine models, these three species have shorter lifespans, are less resource intense, and are amenable to high-throughput drug and RNA interference screening to test a myriad of promising drugs against novel targets. In this review, we introduce species-specific breeding strategies, highlight the advantages of modeling brain tumors in each non-mammalian species, and underscore the successes attributed to scientific investigation using these models. We conclude with an optimistic proposal that discoveries in the fields of cancer research, and in particular neuro-oncology, may be expedited using these powerful screening tools and strategies.
- Published
- 2020
26. Accelerating development of fish and wildlife professionals will take more than training
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William F. Siemer, Meghan S. Baumer, Emily F. Pomeranz, Daniel J. Decker, Ann B. Forstchen, Shawn J. Riley, Michael V. Schiavone, Christian A. Smith, and Patrick E. Lederle
- Published
- 2022
27. Overlap of Spatial and Temporal Spawning Distributions of Spring and Summer Chinook Salmon Results in Hybridization in the Upper Columbia River
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Christian T. Smith, Thomas J. Desgrosseillier, Mathew R. Cooper, Jennifer Von Bargen, Patrick W. DeHaan, and Gregory S. Fraser
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geography ,Chinook wind ,geography.geographical_feature_category ,Oceanography ,Spring (hydrology) ,Aquatic Science ,Biology ,Ecology, Evolution, Behavior and Systematics - Published
- 2020
28. Well-Placed: The Geography of Opportunity and High School Effects on College Attendance
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Christian Michael Smith and Noah Hirschl
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Higher education ,education ,Predictor variables ,Academic achievement ,Education ,SocArXiv|Social and Behavioral Sciences|Sociology ,0502 economics and business ,SocArXiv|Social and Behavioral Sciences|Sociology|Sociology of Education ,050207 economics ,Location ,Medical education ,bepress|Social and Behavioral Sciences|Sociology|Educational Sociology ,business.industry ,SocArXiv|Social and Behavioral Sciences|Sociology|Inequality, Poverty, and Mobility ,05 social sciences ,Multilevel model ,SocArXiv|Education|Higher Education ,Attendance ,050301 education ,bepress|Social and Behavioral Sciences|Sociology ,SocArXiv|Education ,bepress|Education ,bepress|Social and Behavioral Sciences ,SocArXiv|Social and Behavioral Sciences ,bepress|Education|Higher Education ,bepress|Social and Behavioral Sciences|Sociology|Inequality and Stratification ,business ,0503 education ,Merge (version control) - Abstract
Recent work has broadened the scope of school effectiveness research to consider not only academic achievement but also other outcomes, especially college attendance. This literature has argued that high schools are an important determinant of college attendance, with some contending that high schools matter more for college attendance than for academic achievement. A separate branch of research has illustrated how place-based opportunities facilitate college attendance. We merge these two literatures by asking if schools’ geographic context can explain apparent variation in effectiveness among Wisconsin high schools. We find that geographic context explains nearly a third of the variance in traditional estimates of school effectiveness on college attendance, because factors like proximity to colleges are strongly associated with college attendance. Accounting for geography is therefore important in order not to overstate high schools’ role in higher education outcomes. In contrast, geographic context explains little of the variance in academic achievement growth. Thus, if high schools seem to matter more for college attendance than for academic achievement under traditional estimates, schools’ apparent importance for the two outcomes converge upon adjusting for differences in geographic context. Results are based on multilevel models applied to rich administrative data on every Wisconsin public high school entrant between 2006 and 2011.
- Published
- 2020
29. Predicting Terrorist Attacks in the United States using Localized News Data
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Steven J. Krieg, Christian W. Smith, Rusha Chatterjee, and Nitesh V. Chawla
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FOS: Computer and information sciences ,Machine Learning ,Computer Science - Machine Learning ,Multidisciplinary ,Terrorism ,United States ,Machine Learning (cs.LG) - Abstract
Terrorism is a major problem worldwide, causing thousands of fatalities and billions of dollars in damage every year. Toward the end of better understanding and mitigating these attacks, we present a set of machine learning models that learn from localized news data in order to predict whether a terrorist attack will occur on a given calendar date and in a given state. The best model--a Random Forest that learns from a novel variable-length moving average representation of the feature space--achieves area under the receiver operating characteristic scores $> .667$ on four of the five states that were impacted most by terrorism between 2015 and 2018. Our key findings include that modeling terrorism as a set of independent events, rather than as a continuous process, is a fruitful approach--especially when the events are sparse and dissimilar. Additionally, our results highlight the need for localized models that account for differences between locations. From a machine learning perspective, we found that the Random Forest model outperformed several deep models on our multimodal, noisy, and imbalanced data set, thus demonstrating the efficacy of our novel feature representation method in such a context. We also show that its predictions are relatively robust to time gaps between attacks and observed characteristics of the attacks. Finally, we analyze factors that limit model performance, which include a noisy feature space and small amount of available data. These contributions provide an important foundation for the use of machine learning in efforts against terrorism in the United States and beyond.
- Published
- 2022
30. Språkrådets tilskuddsordning for å ta vare på lokale navn – bakgrunn for tiltaket og status etter seks år
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Ore, Christian-Emil Smith
- Abstract
In Norway, onomastic fieldwork and the study of place names have a tradition back to the 19th c. In 20th c. numerous field work campaigns were undertaken and extensive collections were created. The last large project ended almost 40 years ago. This fact and the Norwegian ratification of the UNESCO charter for the protection of intangible cultural heritage in 2007, prompted the Norwegian Cultural Ministry to launch a funding scheme for the collection of local place names. The paper discusses the context for this decision. A digital registration system was ready in 2016 and in the same year, the first projects were funded. In the paper, the registered data are analysed and the experiences with the system are discussed. The database currently contains 126 000 detailed registrations. This is a substantial number, and the project can be considered a success. On the other hand, the number could have been higher. A reason for this is the lack of a good and user-friendly search interface and a nationwide organization taking care of datasets from onomastic fieldwork.
- Published
- 2022
31. Racial Disparities in Criminal Sentencing Vary Considerably across Federal Judges
- Author
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Nicholas Goldrosen, Christian Michael Smith, Maria-Veronica Ciocanel, Rebecca Santorella, Shilad Sen, Shawn Bushway, and Chad M. Topaz
- Subjects
Economics and Econometrics - Abstract
Substantial race-based disparities exist in federal criminal sentencing. We analyze 380,000 recent (2006-2019) sentences in the JUSTFAIR database and show that these disparities are large and vary considerably across judges. Judges assign white defendants sentences 13% shorter than Black defendants’ and 19% shorter than Hispanic defendants’, on average, conditional on case characteristics and district. Judges one standard deviation above average in their estimated Black-white disparity give Black defendants sentences 39% conditionally longer than white defendants’, vis-à-vis an average disparity of 13%. Judges one standard deviation above average in their estimated Hispanic-white disparity give Hispanic defendants sentences 49% conditionally longer than white defendants’, compared to the average disparity of 19%.
- Published
- 2023
32. Correction: PINK1 Is a Negative Regulator of Growth and the Warburg Effect in Glioblastoma
- Author
-
Sameer Agnihotri, Brian Golbourn, Xi Huang, Marc Remke, Susan Younger, Rob A. Cairns, Alan Chalil, Christian A. Smith, Stacey-Lynn Krumholtz, Danielle Mackenzie, Patricia Rakopoulos, Vijay Ramaswamy, Michael S. Taccone, Paul S. Mischel, Gregory N. Fuller, Cynthia Hawkins, William Stanford, Michael D. Taylor, Gelareh Zadeh, and James T. Rutka
- Subjects
Cancer Research ,Oncology - Published
- 2022
33. Shakespeare's Influence on Karl Marx
- Author
-
Christian A. Smith
- Published
- 2021
34. Standing the World on Its Feet; The Rheinische Zeitung Articles
- Author
-
Christian A. Smith
- Published
- 2021
35. 'But Where Then? That Is the Question'
- Author
-
Christian A. Smith
- Published
- 2021
36. 'Such Men Are Dangerous:' Politics, History and Revolution1
- Author
-
Christian A. Smith
- Subjects
Politics ,History ,Gender studies - Published
- 2021
37. In Love in Shakespeare
- Author
-
Christian A. Smith
- Published
- 2021
38. 'The Point Is to Change It'
- Author
-
Christian A. Smith
- Subjects
Mathematical analysis ,Point (geometry) ,Mathematics - Published
- 2021
39. 'That Smooth-Faced Gentleman, Tickling Commodity'1
- Author
-
Christian A. Smith
- Subjects
Commerce ,Economics ,Tickling ,Commodity (Marxism) - Published
- 2021
40. Obiskovanje srednjih šol med mladimi z nizkimi dohodki: pojasnjevanje razlik med srednjimi šolami v Wisconsinu
- Author
-
Christian Michael Smith and Noah Hirschl
- Subjects
Educational opportunities ,Socioeconomic situation ,Erziehung, Schul- und Bildungswesen ,Armut ,Schulorganisation ,Demographical data ,Social inequality ,Low income youth ,Schulpädagogik ,Einflussfaktor ,School organisation ,Demografische Daten ,Education ,Bildungssoziologie ,Wisconsin ,Social disadvantage ,ddc:370 ,Statistik ,Sozioökonomische Lage ,Poverty ,USA ,Soziale Ungleichheit ,Statistics ,Educational opportunity ,Attendance ,Übergang ,Pupil ,College ,Wohnort ,Pupils ,High School ,Soziale Benachteiligung ,Socioeconomic position ,Place of residence ,School organization ,Schüler ,Zugang ,Bildungschance ,Psychology ,Disadvantaged background ,Demography - Abstract
Bolstering low-income students’ postsecondary participation is important to remediate these students’ disadvantages and to improve society’s overall level of education. Recent research has demonstrated that secondary schools vary considerably in their tendencies to send students to postsecondary education, but existing research has not systematically identified the school characteristics that explain this variation. Identifying these characteristics can help improve low-income students’ postsecondary outcomes. We identify relevant characteristics using population-level data from Wisconsin, a mid-size state in the United States. We first show that Wisconsin’s income-based disparities in postsecondary participation are wide, even net of academic achievement. Next, we show that several geographic characteristics of schools help explain between-secondary school variation in low-income students’ postsecondary outcomes. Finally, we test whether a dense set of school organisational features explain any remaining variation. We find that these features explain virtually no variation in secondary schools’ tendencies to send low-income students to postsecondary education.
- Published
- 2021
41. Successful wildlife conservation requires good governance
- Author
-
Ann B. Forstchen, Daniel J. Decker, Michael V. Schiavone, Darragh Hare, Emily F. Pomeranz, Cynthia A. Jacobson, and Christian A. Smith
- Subjects
Program evaluation ,Relation (database) ,General. Including nature conservation, geographical distribution ,program evaluation ,QH1-199.5 ,public trust ,relevancy ,Good governance ,wildlife conservation ,good governance ,Public trust ,wildlife management ,Wildlife management ,Program Design Language ,Business ,Environmental planning ,Wildlife conservation - Abstract
Public wildlife management in the United States is transforming as agencies seek relevancy to broader constituencies. State agencies in the United States, while tasked with conserving wildlife for all beneficiaries of the wildlife trust, have tended to manage for a limited range of benefits in part due to a narrow funding model heavily dependent on hunting, fishing, and trapping license buyers. To best meet the needs, interests, and concerns of a broader suite of beneficiaries, agencies will need to reconsider how priorities for management are set. This presents an opportunity for conservation program design and evaluation to be elevated in importance. We argue that success in wildlife conservation in the U.S. requires assessment of both decision-making processes and management results in relation to four questions: conservation of what, under what authority, for what purposes, and for whom?
- Published
- 2021
42. Racial Disparities in Criminal Sentencing Vary Considerably across Federal Judges
- Author
-
Christian Michael Smith, Nicholas Goldrosen, Maria-Veronica Ciocanel, Rebecca Santorella, Chad M. Topaz, and Shilad Sen
- Subjects
digestive, oral, and skin physiology ,humanities ,bepress|Law ,bepress|Social and Behavioral Sciences|Sociology ,SocArXiv|Social and Behavioral Sciences|Sociology ,fluids and secretions ,bepress|Social and Behavioral Sciences|Sociology|Criminology ,parasitic diseases ,behavior and behavior mechanisms ,bepress|Social and Behavioral Sciences ,SocArXiv|Law ,SocArXiv|Law|Judges ,bepress|Law|Judges ,SocArXiv|Social and Behavioral Sciences ,SocArXiv|Social and Behavioral Sciences|Sociology|Crime, Law, and Deviance - Abstract
Studying 380,000 criminal cases in federal district courts from 2006 to 2019, we replicate previous findings that aggregate, conditional racial disparities in sentence lengths are large. We further show that estimated racial disparities in sentencing vary considerably across judges. Results suggest that judges assign white defendants sentences that are conditionally 13% shorter than Black defendants’ and 19% shorter than Hispanic defendants’, on average. A judge who is one standard deviation above average in terms of estimated Black-white disparity gives Black defendants sentences that are conditionally 39% longer than white defendants’, compared to the average disparity of 13%. A judge who is one standard deviation above average in terms of estimated Hispanic-white disparity gives Hispanic defendants sentences that are conditionally 49% longer than white defendants’, compared to the average disparity of 19%.
- Published
- 2021
43. Discriminating Among Pacific Salmon, Rainbow Trout, and Atlantic Salmon Species Using Common Genetic Screening Methods
- Author
-
Christian T. Smith, Wesley A. Larson, Andrew W. Barclay, Christopher Habicht, Keith Turnquist, and Heather A. Hoyt
- Subjects
0106 biological sciences ,0303 health sciences ,Ecology ,biology ,Zoology ,biology.organism_classification ,010603 evolutionary biology ,01 natural sciences ,Pacific ocean ,03 medical and health sciences ,Common species ,Screening method ,Oncorhynchus ,Animal Science and Zoology ,Rainbow trout ,Salmo ,Ecology, Evolution, Behavior and Systematics ,030304 developmental biology ,Nature and Landscape Conservation - Abstract
The five most common species of Pacific salmon, Rainbow Trout (steelhead) Oncorhynchus spp., and Atlantic Salmon Salmo salar intermingle in the North Pacific Ocean and its freshwater tributaries. Efficient morphological methods for distinguishing among these species are sometimes limited by condition of the specimen (degraded or missing morphology), life history stage, or training of the observer. Researchers have successfully applied various genetic methods to distinguish among these species when morphological analyses are not possible, but they cannot easily incorporate these methods into standard fish and wildlife population monitoring analysis workflows. Here we test five 5′–3′ exonuclease (TaqMan) assays developed from mitochondrial genes and provide novel methods that take advantage of TaqMan output to distinguish among these species. We found that combinations of as few as two of the five assays were adequate to distinguish all species. TaqMan chemistry is designed to interrogate a single nucleotide locus. We also explore the basis for the variation in the observed scatter plot distributions (variation in florescent signals) and show that this variation is due to nucleotide diversity in and near the probe site. Because the SNPs underlying the assays developed here are all physically close to one another along the mitochondrial genome, the potential exists to develop a single DNA sequence-based assay to discriminate among salmon species. This single assay can be added to a genotyping-by-sequencing panel to identify and exclude nontarget species from analyses.
- Published
- 2019
44. Moving the paradigm from stakeholders to beneficiaries in wildlife management
- Author
-
Michael V. Schiavone, Daniel J. Decker, Patrick E. Lederle, R. Kipp Frohlich, William F. Siemer, Christian A. Smith, Emily F. Pomeranz, and Ann B. Forstchen
- Subjects
Good governance ,Ecology ,General Earth and Planetary Sciences ,Wildlife management ,Business ,Environmental planning ,Ecology, Evolution, Behavior and Systematics ,Nature and Landscape Conservation ,General Environmental Science - Published
- 2019
45. Genetic structure and the history of chub in the Alvord Basin
- Author
-
Michael H. Meeuwig, Jennifer Von Bargen, Christian T. Smith, Patrick W. DeHaan, and Paul D. Scheerer
- Subjects
0106 biological sciences ,0301 basic medicine ,education.field_of_study ,biology ,Ecology ,Population ,Biodiversity ,Borax Lake chub ,Structural basin ,biology.organism_classification ,010603 evolutionary biology ,01 natural sciences ,03 medical and health sciences ,030104 developmental biology ,Habitat ,Sympatric speciation ,Genetic structure ,Genetics ,education ,Ecology, Evolution, Behavior and Systematics ,Alvord chub - Abstract
Knowledge of the distribution of genetic resources within and among taxa is prerequisite for development of management strategies which facilitate conservation of those resources. We used restriction-site associated DNA (RAD) sequencing to survey genetic variation in Alvord Chub and Borax Lake Chub from the Alvord Basin in southeastern Oregon and northern Nevada, USA. Our specific goals were to gain an understanding of the population genetic structure of Alvord Chub and the relationship between this species and Borax Lake Chub. Despite the fact that our collections were taken from ponds and streams, isolated from one another by kilometers of desert, our results revealed that diversity in Alvord Chub was primarily distributed among two regional groupings, which we hypothesize to be related to habitat changes following the end of the most recent glaciation event, approximately 10 thousand years ago. Our results further revealed that Alvord Chub and Borax Lake Chub shared common ancestors during that glaciation event, and that divergence between the two may have been sympatric. Finally, we observed evidence that the clade containing Alvord Chub and Borax Lake Chub was isolated from its closest extant relative, the Tui chub, during the Miocene Epoch, when volcanic flows were forming the mountains surrounding what became the Alvord Basin. These results will be useful for informing conservation strategies for Alvord Chub, and provide new insights regarding the role of these species in the evolutionary legacy of the region.
- Published
- 2019
46. Characterization of a Clival Chordoma Xenograft Model Reveals Tumor Genomic Instability
- Author
-
Daniel Picard, James T. Rutka, Andrew Bondoc, Marc Remke, Michael D. Cusimano, Roberto J. Diaz, Christian A. Smith, James Loukides, Brian Golbourn, Amanda Luck, and Nesrin Sabha
- Subjects
Male ,musculoskeletal diseases ,Brachyury ,Apoptosis ,Mice, SCID ,Biology ,Polymorphism, Single Nucleotide ,Skull Base Neoplasms ,S100 protein ,Genomic Instability ,Pathology and Forensic Medicine ,Mice ,03 medical and health sciences ,Cytokeratin ,0302 clinical medicine ,Mice, Inbred NOD ,FHIT ,CDKN2A ,Biomarkers, Tumor ,Chordoma ,Tumor Cells, Cultured ,medicine ,Animals ,Humans ,Aged ,Cell Proliferation ,Severe combined immunodeficiency ,Genome, Human ,Gene Expression Profiling ,medicine.disease ,Xenograft Model Antitumor Assays ,Gene expression profiling ,030220 oncology & carcinogenesis ,Cancer research ,030217 neurology & neurosurgery - Abstract
Patient-derived xenografts retain the genotype of the parent tumors more readily than tumor cells maintained in culture. The two previously reported clival chordoma xenografts were derived from recurrent tumors after radiation. To study the genetics of clival chordoma in the absence of prior radiation exposure we established a patient-derived xenograft at primary resection of a clival chordoma. Epicranial grafting of clival chordoma collected during surgery was performed. Tumor growth was established in a nonobese diabetic/severe combined immunodeficiency mouse and tumors have been passaged serially for seven generations. Physaliferous cell architecture was shown in the regenerated tumors, which stained positive for Brachyury, cytokeratin, and S100 protein. The tumors showed bone invasion. Single-nucleotide polymorphism analysis of the tumor xenograft was compared with the parental tumor. Copy number gain of the T gene (brachyury) and heterozygous loss of cyclin dependent kinase inhibitor 2A (CDKN2A) was observed. Heterozygous loss of the tumor-suppressor fragile histidine triad (FHIT) gene also was observed, although protein expression was preserved. Accumulation of copy number losses and gains as well as increased growth rate was observed over three generations. The patient-derived xenograft reproduces the phenotype of clival chordoma. This model can be used in the future to study chordoma biology and to assess novel treatments.
- Published
- 2018
47. Pleomorphic Leiomyosarcoma Presenting as a Upper Back Epidermal Inclusion Cyst
- Author
-
Douglas J. Grider and Christian Taylor Smith
- Subjects
Leiomyosarcoma ,CD31 ,Male ,Pathology ,medicine.medical_specialty ,Epidermal Cyst ,Soft Tissue Neoplasms ,Dermatology ,Epidermal Inclusion Cyst ,Pathology and Forensic Medicine ,Diagnosis, Differential ,030207 dermatology & venereal diseases ,03 medical and health sciences ,0302 clinical medicine ,Dermis ,medicine ,Humans ,business.industry ,Soft tissue ,General Medicine ,Fascia ,Middle Aged ,medicine.disease ,medicine.anatomical_structure ,Desmin ,Sarcoma ,business - Abstract
Leiomyosarcoma is a common sarcoma of both organs and soft tissues; however, large intradermal tumors are extremely rare. Presented is a pleomorphic leiomyosarcoma in a 64-year-old man, initially considered to be a ruptured epidermal inclusion cyst. The patient had a mildly tender, enlarging soft-tissue mass with a central pore on his right upper back. Incomplete extirpation showed a 5 × 5 cm heterogeneous, predominantly pleomorphic sarcoma with areas of fascicular and storiform spindled cells infiltrating the subcutaneous soft tissue to the underlying fascia and extending upward into the middle and upper dermis with prominent extension into pilosebaceous units. There were small foci with myxoid stroma and large areas of necrosis. CD31 demonstrated thin-walled curvilinear vessels throughout the tumor. The first desmin immunohistochemical stain near areas with myxoid stroma was negative but smooth muscle actin positive. However, desmin positivity was strong and diffuse in the spindled and more pleomorphic areas on 2 additional tissue sections. No rhabdomyoblasts or striated muscle fibers were seen. A diagnosis of pleomorphic leiomyosarcoma was rendered. This case highlights a unique clinical and histological presentation of a leiomyosarcoma initially mistaken to be a ruptured epidermal inclusion cyst, and the need to sometimes apply ancillary immunohistochemical studies to sections from more than one tissue block to accurately differentiate heterogeneous sarcomas with similar histologic features.
- Published
- 2021
48. Pelvic Fragility Fractures: An Opportunity to Improve the Undertreatment of Osteoporosis
- Author
-
Jonathan J. Carmouche, David W. Barton, Amit S Piple, and Christian Taylor Smith
- Subjects
0301 basic medicine ,Male ,Pediatrics ,medicine.medical_specialty ,Osteoporosis ,030209 endocrinology & metabolism ,03 medical and health sciences ,0302 clinical medicine ,Absorptiometry, Photon ,medicine ,Secondary Prevention ,Humans ,Orthopedics and Sports Medicine ,Pelvic Bones ,Aged ,Retrospective Studies ,Aged, 80 and over ,Hip fracture ,Bone Density Conservation Agents ,business.industry ,Medical record ,Retrospective cohort study ,General Medicine ,Evidence-based medicine ,Middle Aged ,medicine.disease ,030104 developmental biology ,Pelvic fracture ,Population study ,Surgery ,Fracture prevention ,Female ,business ,Osteoporotic Fractures - Abstract
Background Osteoporosis is often undiagnosed until patients experience fragility fractures. Pelvic fractures are common but underappreciated sentinel fractures. Screening patients with a pelvic fracture for osteoporosis may provide an opportunity to initiate appropriate treatments such as anti-osteoporosis therapy to prevent additional fractures. Methods This retrospective cohort review examined the management of osteoporosis after pelvic fractures at a large tertiary care center without an established secondary fracture prevention program. Data were extracted from electronic medical records of all new patients with a pelvic fracture who were ≥50 years of age from this center and its affiliated community hospitals from 2008 to 2014. Outcome measures included the initiation of anti-osteoporosis therapy before the fracture, within the year following the fracture, >1 year following the fracture, or never and new osteoporotic fractures within 2 years after a pelvic fracture. Results From 2008 to 2014, 947 patients presented with pelvic fractures. Of these patients, 27.1% (257 patients) were taking anti-osteoporosis medications before the fracture. Four percent of treatment-naive patients began anti-osteoporosis therapy within 1 year of fracture, with 1.2% (11 patients) starting after 1 year. Of the treatment-naive patients, 92.3% (637 patients) were never prescribed anti-osteoporosis therapy. Treatment rates were consistent over time. Within 2 years, 41.0% (388 patients) developed fragility fractures at secondary sites: 12.0% (114 patients) experienced a hip fracture, and 16.4% (155 patients) experienced a vertebral fracture. Conclusions Osteoporosis screening and initiation of secondary fracture prevention after a pelvic fracture were inadequate in the study population. Of the patients in this study, 909 (96.0%) never underwent a dual x-ray absorptiometry (DXA) scan during the study period. Of the 690 treatment-naive patients, 637 (92.3%) were never administered anti-osteoporosis medications. Within 2 years, 41.0% of all patients developed additional osteoporotic fractures. This study demonstrates an opportunity to improve bone health by screening for and treating osteoporosis in patients with a pelvic fragility fracture. Level of evidence Prognostic Level IV. See Instructions for Authors for a complete description of levels of evidence.
- Published
- 2020
49. CASCADES, a novel SOX2 super-enhancer associated long noncoding RNA, regulates cancer stem cell specification and differentiation in glioblastoma multiforme
- Author
-
Nesrin Sabha, Alexandra N. Riemenschneider, Stacey Krumholtz, Jason Karamchandani, Michael J. Johnston, Sunit Das, James T. Rutka, Jonathan K. Watts, Jenny Wang, Christian A. Smith, Marco Gallo, Roel G.W. Verhaak, Uswa Shahzad, Christopher I. Li, Pranathi Meda, and Frederick S. Varn
- Subjects
medicine.anatomical_structure ,Super-enhancer ,SOX2 ,Cancer stem cell ,Glioma ,Cell ,medicine ,Cancer research ,Regulator ,Epigenetics ,Biology ,medicine.disease ,Long non-coding RNA - Abstract
Glioblastoma multiforme (GBM) is the most common primary malignant brain tumor in adults, with a median survival of just over one year. The failure of available treatments to achieve remission in patients with GBM has been attributed to the presence of cancer stem cells (CSCs), which are thought to play a central role in tumor development and progression and serve as a treatment-resistant cell repository capable of driving tumor recurrence; in fact, the property of “stemness” itself may be responsible for treatment resistance. In this study, we identify a novel lncRNA, Cancer stem cell associated distal enhancer of SOX2 (CASCADES) that functions as an epigenetic regulator in glioma CSCs (GSCs). CASCADES is expressed in IDH-wild type GBM and significantly enriched in GSCs. Knockdown of CASCADES in GSCs results in differentiation towards a neuronal lineage in a cell- and cancer-specific manner. Bioinformatics analysis reveals that CASCADES functions as a super-enhancer associated lncRNA epigenetic regulator of SOX2. Our findings identify CASCADES as a critical regulator of stemness in GSCs and represent a novel epigenetic and therapeutic target for disrupting the cancer stem cell compartment in GBM.
- Published
- 2020
50. MRI-guided focused ultrasound enhances drug delivery in experimental diffuse intrinsic pontine glioma
- Author
-
Brian Golbourn, Naohide Fujita, Andrew Bondoc, Nesrin Sabha, Christian A. Smith, Kristina Mikloska, Saira Alli, James T. Rutka, Stacey Krumholtz, Amanda Luck, Joji Ishida, Colin Maslink, Dilakshan Srikanthan, and Kullervo Hynynen
- Subjects
medicine.medical_treatment ,Pharmaceutical Science ,02 engineering and technology ,Blood–brain barrier ,03 medical and health sciences ,Mice ,Drug Delivery Systems ,Glioma ,medicine ,Animals ,Brain Stem Neoplasms ,Humans ,Doxorubicin ,030304 developmental biology ,0303 health sciences ,Chemotherapy ,business.industry ,Diffuse Intrinsic Pontine Glioma ,021001 nanoscience & nanotechnology ,medicine.disease ,Magnetic Resonance Imaging ,Pons ,3. Good health ,medicine.anatomical_structure ,Pharmaceutical Preparations ,Drug delivery ,Microbubbles ,Cancer research ,Brainstem ,0210 nano-technology ,business ,medicine.drug - Abstract
Diffuse intrinsic pontine glioma (DIPG) is a surgically unresectable and devasting tumour in children. To date, there are no effective chemotherapeutics despite a myriad of clinical trials. The intact blood-brain barrier (BBB) is likely responsible for the limited clinical response to chemotherapy. MRI-guided focused ultrasound (MRgFUS) is a promising non-invasive method for treating CNS tumours. Moreover, MRgFUS allows for the temporary and repeated disruption of the BBB. Our group previously reported the feasibility of temporary BBB opening within the normal murine brainstem using MRgFUS following intravenous (IV) administration of microbubbles. In the current study, we set out to test the effectiveness of targeted chemotherapy when paired with MRgFUS in murine models of DIPG. Doxorubicin was selected from a drug screen consisting of conventional chemotherapeutics tested on patient-derived cell lines. We studied the RCAS/Tv-a model where RCAS-Cre, RCAS-PDGFB, and RCAS-H3.3K27M were used to drive tumourigenesis upon injection in the pons. We also used orthotopically injected SU-DIPG-6 and SU-DIPG-17 xenografts which demonstrated a diffusely infiltrative tumour growth pattern similar to human DIPG. In our study, SU-DIPG-17 xenografts were more representative of human DIPG with an intact BBB. Following IV administration of doxorubicin, MRgFUS-treated animals exhibited a 4-fold higher concentration of drug within the SU-DIPG-17 brainstem tumours compared to controls. Moreover, the volumetric tumour growth rate was significantly suppressed in MRgFUS-treated animals whose tumours also exhibited decreased Ki-67 expression. Herein, we provide evidence for the ability of MRgFUS to enhance drug delivery in a mouse model of DIPG. These data provide critical support for clinical trials investigating MRgFUS-mediated BBB opening, which may ameliorate DIPG chemotherapeutic approaches in children.
- Published
- 2020
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