392 results on '"Clarke JM"'
Search Results
2. CO154 Ramucirumab+Docetaxel Post Immune Checkpoint Inhibitors (ICIS) and Platinum-Based Chemotherapy (CHEMO) in Advanced or Metastatic Non-Small Cell Lung Cancer (ANSCLC): Learnings from the Treat-Lung Observational Study
- Author
-
Pennell, NA, primary, Clarke, JM, additional, Liu, S, additional, Gutierrez, M, additional, Batus, M, additional, Bauman, J, additional, Fidler, MJ, additional, Marmarelis, ME, additional, Feliciano, J, additional, Barzi, A, additional, Lopes, G, additional, Molife, C, additional, Verma, S, additional, Stefaniak, VJ, additional, Winfree, KB, additional, Belli, A, additional, Cui, Z, additional, Kim, S, additional, Manion, C, additional, Afolabi, M, additional, Caria, N, additional, and Bonomi, P, additional
- Published
- 2022
- Full Text
- View/download PDF
3. Using a secure, continually updating, web source processing pipeline to support the real-time data synthesis and analysis of scientific literature: development and validation study
- Author
-
Vaghela, U, Rabinowicz, S, Bratsos, P, Martin, G, Fritzilas, E, Markar, S, Purkayastha, S, Stringer, K, Singh, H, Llewellyn, C, Dutta, D, Clarke, JM, Howard, M, Serban, O, and Kinross, J
- Subjects
08 Information and Computing Sciences ,11 Medical and Health Sciences ,Medical Informatics ,17 Psychology and Cognitive Sciences - Abstract
Background: The scale and quality of the global scientific response to the COVID-19 pandemic have unquestionably saved lives. However, the COVID-19 pandemic has also triggered an unprecedented “infodemic”; the velocity and volume of data production have overwhelmed many key stakeholders such as clinicians and policy makers, as they have been unable to process structured and unstructured data for evidence-based decision making. Solutions that aim to alleviate this data synthesis–related challenge are unable to capture heterogeneous web data in real time for the production of concomitant answers and are not based on the high-quality information in responses to a free-text query. Objective: The main objective of this project is to build a generic, real-time, continuously updating curation platform that can support the data synthesis and analysis of a scientific literature framework. Our secondary objective is to validate this platform and the curation methodology for COVID-19–related medical literature by expanding the COVID-19 Open Research Dataset via the addition of new, unstructured data. Methods: To create an infrastructure that addresses our objectives, the PanSurg Collaborative at Imperial College London has developed a unique data pipeline based on a web crawler extraction methodology. This data pipeline uses a novel curation methodology that adopts a human-in-the-loop approach for the characterization of quality, relevance, and key evidence across a range of scientific literature sources. Results: REDASA (Realtime Data Synthesis and Analysis) is now one of the world’s largest and most up-to-date sources of COVID-19–related evidence; it consists of 104,000 documents. By capturing curators’ critical appraisal methodologies through the discrete labeling and rating of information, REDASA rapidly developed a foundational, pooled, data science data set of over 1400 articles in under 2 weeks. These articles provide COVID-19–related information and represent around 10% of all papers about COVID-19. Conclusions: This data set can act as ground truth for the future implementation of a live, automated systematic review. The three benefits of REDASA’s design are as follows: (1) it adopts a user-friendly, human-in-the-loop methodology by embedding an efficient, user-friendly curation platform into a natural language processing search engine; (2) it provides a curated data set in the JavaScript Object Notation format for experienced academic reviewers’ critical appraisal choices and decision-making methodologies; and (3) due to the wide scope and depth of its web crawling method, REDASA has already captured one of the world’s largest COVID-19–related data corpora for searches and curation.
- Published
- 2021
4. Guiding interoperable electronic health records through patient sharing networks
- Author
-
Clarke, JM, Warren, LR, Arora, S, Barahona, M, Darzi, AW, and National Institute for Health Research
- Abstract
Effective sharing of clinical information between care providers is a critical component of a safe, efficient health system. National data sharing systems may be costly, politically contentious and do not reflect local patterns of care delivery. This study examines hospital attendances in England from 2013 to 2015 to identify instances of patient sharing between hospitals. Of 19.6 million patients receiving care from 155 hospital care provider, 130 million presentations were identified. On 14.7 million occasions (12%), patients attended a different hospital to the one they attended on their previous interaction. A network of hospitals was constructed based on the frequency of patient sharing between hospitals which was partitioned using the Louvain algorithm into 10 distinct data-sharing communities, improving the continuity of data sharing in such instances from 0% to 65-95%. Locally implemented data-sharing communities of hospitals may achieve effective accessibility of clinical information without a large-scale national interoperable information system.
- Published
- 2018
5. Venous thromboembolism prophylaxis and treatment in patients with cancer: American Society of Clinical Oncology clinical practice guideline update 2014
- Author
-
Lyman, G, Bohlke, K, Khorana, A, Kuderer, N, Lee, A, Arcelus, J, Balaban, E, Clarke, J, Flowers, C, Francis, C, Gates, L, Kakkar, A, Key, N, Levine, M, Liebman, H, Tempero, M, Wong, S, Somerfield, M, Falanga, A, Lyman GH, Bohlke K, Khorana AA, Kuderer NM, Lee AY, Arcelus JI, Balaban EP, Clarke JM, Flowers CR, Francis CW, Gates LE, Kakkar AK, Key NS, Levine MN, Liebman HA, Tempero MA, Wong SL, Somerfield MR, Falanga A, Lyman, G, Bohlke, K, Khorana, A, Kuderer, N, Lee, A, Arcelus, J, Balaban, E, Clarke, J, Flowers, C, Francis, C, Gates, L, Kakkar, A, Key, N, Levine, M, Liebman, H, Tempero, M, Wong, S, Somerfield, M, Falanga, A, Lyman GH, Bohlke K, Khorana AA, Kuderer NM, Lee AY, Arcelus JI, Balaban EP, Clarke JM, Flowers CR, Francis CW, Gates LE, Kakkar AK, Key NS, Levine MN, Liebman HA, Tempero MA, Wong SL, Somerfield MR, and Falanga A
- Abstract
Purpose: To provide current recommendations about the prophylaxis and treatment of venous thromboembolism (VTE) in patients with cancer. Methods: PubMed and the Cochrane Library were searched for randomized controlled trials, systematic reviews, meta-analyses, and clinical practice guidelines from November 2012 through July 2014. An update committee reviewed the identified abstracts. Results: Of the 53 publications identified and reviewed, none prompted a change in the 2013 recommendations. Recommendations: Most hospitalized patients with active cancer require thromboprophylaxis throughout hospitalization. Routine thromboprophylaxis is not recommended for patients with cancer in the outpatient setting. It may be considered for selected high-risk patients. Patients with multiple myeloma receiving antiangiogenesis agents with chemotherapy and/or dexamethasone should receive prophylaxis with either low-molecular weight heparin (LMWH) or low-dose aspirin. Patients undergoing major surgery should receive prophylaxis starting before surgery and continuing for at least 7 to 10 days. Extending prophylaxis up to 4 weeks should be considered in those undergoing major abdominal or pelvic surgery with high-risk features. LMWH is recommended for the initial 5 to 10 days of treatment for deep vein thrombosis and pulmonary embolism as well as for long-term secondary prophylaxis (at least 6 months). Use of novel oral anticoagulants is not currently recommended for patients with malignancy and VTE because of limited data in patients with cancer. Anticoagulation should not be used to extend survival of patients with cancer in the absence of other indications. Patients with cancer should be periodically assessed for VTE risk. Oncology professionals should educate patients about the signs and symptoms of VTE.
- Published
- 2015
6. A SMALL OUTBREAK OF EPIDEMIC CEREBRO-SPINAL MENINGITIS
- Author
-
Symes Jo and Clarke Jm
- Subjects
medicine.medical_specialty ,business.industry ,General Engineering ,Outbreak ,Spinal meningitis ,General Medicine ,Articles ,Bioinformatics ,Cerebro ,Emergency medicine ,General Earth and Planetary Sciences ,Medicine ,business ,General Environmental Science - Published
- 2010
7. A CASE OF OBSCURE FEVER WITH PRONOUNCED NERVOUS SYMPTOMS: APPARENTLY DUE TO INFECTION BY A LEPTOTHERIX BACILLUS
- Author
-
Clarke Jm and Scott-Williamson G
- Subjects
Bacillus (shape) ,biology ,business.industry ,General Engineering ,General Earth and Planetary Sciences ,Medicine ,General Medicine ,Articles ,biology.organism_classification ,Bioinformatics ,business ,General Environmental Science ,Microbiology - Published
- 2010
8. On some Symptoms Produced by Tumours of the Optic Thalamus with a Case
- Author
-
Clarke Jm
- Subjects
Pathology ,medicine.medical_specialty ,Text mining ,business.industry ,Thalamus ,General Engineering ,General Earth and Planetary Sciences ,Medicine ,General Medicine ,Articles ,business ,General Environmental Science - Published
- 2010
9. Remarks on Biliary or 'Hypertrophic' Cirrhosis, with a Case in which there was Atrophy of Liver
- Author
-
Clarke Jm
- Subjects
Cirrhosis ,business.industry ,General Engineering ,MEDLINE ,General Medicine ,Articles ,medicine.disease ,Bioinformatics ,Atrophy ,Text mining ,General Earth and Planetary Sciences ,Medicine ,business ,General Environmental Science - Published
- 2010
10. Association mapping of Ug99 resistance in a diverse durum wheat population
- Author
-
Pozniak CJ, Reimer S, Fetch T, Clarke JM, Clarke FR, Somers D, Knox RE, and Singh AK
- Subjects
Wheat breeding ,Wheat genetics - Published
- 2008
11. Fusarium head blight QTL mapping in durum wheat and Triticum carthlicum sources of resistance
- Author
-
Singh AK, Knox RE, Clarke FR, Clarke JM, Fedak G, Singh A, and DePauw RM
- Subjects
Wheat breeding ,Wheat genetics - Published
- 2008
12. Association mapping of semolina yield in diverse durum wheat germplasm
- Author
-
Clarke FR, Clarke JM, Pozniak CJ, Somers DJ, Dexter JE, Knox RE, Reimer S, McCaig TN, and Singh AK
- Subjects
Wheat breeding ,Wheat genetics - Published
- 2008
13. Quantitative trait loci associated with kernel weight and test weight in durum wheat
- Author
-
Houshmand S, Knox RE, Clarke FR, Clarke JM, and Pozniak CP
- Subjects
Wheat breeding ,Wheat genetics - Published
- 2008
14. Enhanced Fusarium head blight resistance in bread wheat and durum by alien introgression
- Author
-
Fedak G, Cao W, Xue A, Savard ME, Clarke JM, Gilbert JA, and Somers DJ
- Subjects
Wheat breeding ,Wheat genetics - Published
- 2008
15. The International Crop Information System manages geneological; phenotypic and genotypic data in a wheat breeding program
- Author
-
Clarke FR, Yates SM, Clarke JM, Knox RM, DePauw RM, and McLaren CG
- Subjects
Wheat breeding ,Wheat genetics - Published
- 2008
16. Venous thromboembolism prophylaxis and treatment in patients with cancer: american society of clinical oncology clinical practice guideline update
- Author
-
Lyman, G, Khorana, A, Kuderer, N, Lee, A, Arcelus, J, Balaban, E, Clarke, J, Flowers, C, Francis, C, Gates, L, Kakkar, A, Key, N, Levine, M, Liebman, H, Tempero, M, Wong, S, Prestrud, A, Falanga, A, Lyman GH, Khorana AA, Kuderer NM, Lee AY, Arcelus JI, Balaban EP, Clarke JM, Flowers CR, Francis CW, Gates LE, Kakkar AK, Key NS, Levine MN, Liebman HA, Tempero MA, Wong SL, Prestrud AA, Falanga A, Lyman, G, Khorana, A, Kuderer, N, Lee, A, Arcelus, J, Balaban, E, Clarke, J, Flowers, C, Francis, C, Gates, L, Kakkar, A, Key, N, Levine, M, Liebman, H, Tempero, M, Wong, S, Prestrud, A, Falanga, A, Lyman GH, Khorana AA, Kuderer NM, Lee AY, Arcelus JI, Balaban EP, Clarke JM, Flowers CR, Francis CW, Gates LE, Kakkar AK, Key NS, Levine MN, Liebman HA, Tempero MA, Wong SL, Prestrud AA, and Falanga A
- Abstract
Purpose: To provide recommendations about prophylaxis and treatment of venous thromboembolism (VTE) in patients with cancer. Prophylaxis in the outpatient, inpatient, and perioperative settings was considered, as were treatment and use of anticoagulation as a cancer-directed therapy. Methods: A systematic review of the literature published from December 2007 to December 2012 was completed in MEDLINE and the Cochrane Collaboration Library. An Update Committee reviewed evidence to determine which recommendations required revision. Results: Forty-two publications met eligibility criteria, including 16 systematic reviews and 24 randomized controlled trials. Recommendations: Most hospitalized patients with cancer require thromboprophylaxis throughout hospitalization. Thromboprophylaxis is not routinely recommended for outpatients with cancer. It may be considered for selected high-risk patients. Patients with multiple myeloma receiving antiangiogenesis agents with chemotherapy and/or dexamethasone should receive prophylaxis with either low-molecular weight heparin (LMWH) or low-dose aspirin. Patients undergoing major cancer surgery should receive prophylaxis, starting before surgery and continuing for at least 7 to 10 days. Extending prophylaxis up to 4 weeks should be considered in those with high-risk features. LMWH is recommended for the initial 5 to 10 days of treatment for deep vein thrombosis and pulmonary embolism as well as for long-term (6 months) secondary prophylaxis. Use of novel oral anticoagulants is not currently recommended for patients with malignancy and VTE. Anticoagulation should not be used for cancer treatment in the absence of other indications. Patients with cancer should be periodically assessed for VTE risk. Oncology professionals should provide patient education about the signs and symptoms of VTE
- Published
- 2013
17. INTRACEREBRAL POTENTIALS TO RARE TARGET AND DISTRACTER AUDITORY AND VISUAL-STIMULI .1. SUPERIOR TEMPORAL PLANE AND PARIETAL LOBE
- Author
-
Halgren, E, Baudena, P, Clarke, Jm, Heit, G, Liegeois, C, Chauvel, P, and Musolino, Antonino
- Published
- 1995
18. Effect of season and temperature on mortality in amphibians due to chytridiomycosis
- Author
-
BERGER, L, primary, SPEARE, R, additional, HINES, HB, additional, MARANTELLI, G, additional, HYATT, AD, additional, McDONALD, KR, additional, SKERRATT, LF, additional, OLSEN, V, additional, CLARKE, JM, additional, GILLESPIE, G, additional, MAHONY, M, additional, SHEPPARD, N, additional, WILLIAMS, C, additional, and TYLER, MJ, additional
- Published
- 2004
- Full Text
- View/download PDF
19. Butyrylated starch is less susceptible to enzymic hydrolysis and increases large-bowel butyrate more than high-amylose maize starch in the rat.
- Author
-
Bajka BH, Topping DL, Cobiac L, and Clarke JM
- Published
- 2006
- Full Text
- View/download PDF
20. Relative potency of prorenoate potassium and spironolactone in attenuating diuretic induced hypokalaemia.
- Author
-
McInnes, GT, Harrison, IR, Shelton, JR, Perkins, RM, and Clarke, JM
- Abstract
The plasma potassium responses to the aldosterone antagonists prorenoate K (10 mg/day and 40 mg/day) and spironolactone (25 mg/day and 100 mg/day) were compared following treatment for 11 days in combination with the diuretic metolazone (2.5 mg/day) in a double-blind crossover study in twelve healthy men. The best estimate of the potency of prorenoate K relative to spironolactone in attenuating metolazone induced hypokalaemia was 5.6 with 95% confidence limits 2.4-35.2. The method employed allowed a statistically valid quantitative comparison of the potassium sparing properties of the mineralocorticoid antagonists after repeated doses and may be useful in the preclinical evaluation of these drugs. [ABSTRACT FROM AUTHOR]
- Published
- 1984
- Full Text
- View/download PDF
21. Relative potency and structure activity relationships of aldosterone antagonists in healthy man: correlation with animal experience.
- Author
-
McInnes, GT, Shelton, JR, Ramsay, LE, Harrison, IR, Asbury, MJ, Clarke, JM, Perkins, RM, and Venning, GR
- Abstract
1 The renal antimineralocorticoid potency of single doses of thirteen compounds with properties in animals compatible with competitive aldosterone antagonism was compared to that of spironolactone in healthy men. 2 Twelve compounds showed significant activity when compared to placebo but only one, prorenoate potassium, was significantly more potent than spironolactone on a weight basis. 3 The results allowed ranking of the compounds in order of potency relative to spironolactone and general observations on structure activity relationships in man. 4 Animal bioassays and in vitro aldosterone binding studies are unreliable predictors of the human activity of competitive mineralocorticoid antagonists. [ABSTRACT FROM AUTHOR]
- Published
- 1982
- Full Text
- View/download PDF
22. A Clinical Lecture ON THREE CASES OF PARAPLEGIA: DUE TO ACUTE ANTERIOR POLIOMYELITIS, TOXIC POLYNEURITIS, AND TRAUMATIC MYELITIS RESPECTIVELY
- Author
-
Clarke Jm
- Subjects
Pediatrics ,medicine.medical_specialty ,Pathology ,business.industry ,General Engineering ,Myelitis ,Articles ,General Medicine ,Acute anterior poliomyelitis ,medicine.disease ,medicine ,General Earth and Planetary Sciences ,business ,Paraplegia ,General Environmental Science - Published
- 1908
- Full Text
- View/download PDF
23. The Bradshaw Lecture ON NERVOUS AFFECTIONS OF THE SIXTH AND SEVENTH DECADES OF LIFE
- Author
-
Clarke Jm
- Subjects
business.industry ,General Engineering ,General Earth and Planetary Sciences ,Medicine ,Articles ,General Medicine ,business ,Data science ,Classics ,General Environmental Science - Published
- 1915
- Full Text
- View/download PDF
24. Pathological Changes in Case of Leukæmia from Prolonged Use of X-rays
- Author
-
Clarke Jm
- Subjects
business.industry ,Medicine ,Bioinformatics ,business ,Pathological ,Data science - Published
- 1914
- Full Text
- View/download PDF
25. Remarks on the Changes in the Spinal Cord in Two Cases of Pernicious Anaemia
- Author
-
Clarke Jm
- Subjects
medicine.medical_specialty ,business.industry ,General Engineering ,Articles ,General Medicine ,Bioinformatics ,Spinal cord ,Pernicious anaemia ,Text mining ,medicine.anatomical_structure ,General Earth and Planetary Sciences ,Medicine ,business ,Intensive care medicine ,General Environmental Science - Published
- 1897
- Full Text
- View/download PDF
26. REMARKS on CIRRHOSIS of the LIVER, with ESPECIAL REFERENCE to its OCCURRENCE in CHILDREN, and to the MODE of DEATH in CIRRHOSIS with JAUNDICE
- Author
-
Clarke Jm
- Subjects
medicine.medical_specialty ,Cirrhosis ,business.industry ,General surgery ,General Engineering ,Articles ,General Medicine ,Jaundice ,Bioinformatics ,medicine.disease ,medicine ,General Earth and Planetary Sciences ,medicine.symptom ,business ,General Environmental Science - Published
- 1894
- Full Text
- View/download PDF
27. Nocturnal Transpiration in Wheat
- Author
-
Rawson, HM and Clarke, JM
- Abstract
Over the night, stomata of wheat leaves took several hours to reach their most closed position and began to open some hours before dawn. The pattern and amount of night transpiration was changed by current vapour pressure deficit (VPD) but not by VPD or transpiration during the previous day. Mean night transpiration per unit VPD was unchanged by current VPD. Night transpiration of whole plants increased linearly with VPD though genotypes differed significantly in amount. The most profligate genotype transpired at 50 g m-2 leaf h-1 at a VPD of 30 mbar which was twice the rate of the most thrifty genotype. Attempts were made to estimate the proportion of night transpiration occurring through the stomata and the cuticle by three methods: comparisons of stressed and unstressed leaves, wilting patterns of detached leaves, and transpiration rates of detached leaves in ABA solutions. The methods gave equivalent rankings of the genotypes and similar absolute values for the 'cuticular component', which contributed 13-50% of total night transpiration. We conclude that transpiration could exceed 0.5 mm per night in unstressed crops, though this would be considerably reduced by selection of genotypes with both low cuticular and low stomatal transpiration.
- Published
- 1988
- Full Text
- View/download PDF
28. REMOVAL OF EXTRAMEDULLARY TUMOUR OF CERVICAL CORD: RECOVERY: (AREA OF SUPPLY OF EIGHTH CERVICAL AND FIRST DORSAL POSTERIOR ROOTS.)
- Author
-
Clarke Jm
- Subjects
Dorsum ,Pathology ,medicine.medical_specialty ,Text mining ,business.industry ,General Engineering ,medicine ,General Earth and Planetary Sciences ,Articles ,General Medicine ,Cervical cord ,business ,General Environmental Science - Published
- 1912
- Full Text
- View/download PDF
29. On a Case Presenting Symptoms of Cerebral Tumour, in which a Large Area of the Skull was Removed for Relief of Intracranial Pressure
- Author
-
Clarke Jm and Morton Ca
- Subjects
medicine.medical_specialty ,Pathology ,business.industry ,General Engineering ,Articles ,General Medicine ,Skull ,medicine.anatomical_structure ,Text mining ,General Earth and Planetary Sciences ,Medicine ,Radiology ,business ,General Environmental Science ,Intracranial pressure - Published
- 1895
- Full Text
- View/download PDF
30. REMOVAL OF INTRATHECAL TUMOUR FROM LUMBAR REGION OF SPINAL CORD
- Author
-
Morton Ca and Clarke Jm
- Subjects
medicine.medical_specialty ,Pathology ,business.industry ,General Engineering ,Articles ,General Medicine ,Spinal cord ,Intrathecal ,Surgery ,medicine.anatomical_structure ,Lumbar ,Text mining ,medicine ,General Earth and Planetary Sciences ,business ,General Environmental Science - Published
- 1913
- Full Text
- View/download PDF
31. Use of a bioassay in healthy men to evaluate diuretic-spironolactone combinations.
- Author
-
McInnes, GT, Shelton, JR, Perkins, RM, Harrison, IR, and Clarke, JM
- Abstract
The plasma potassium responses to 1 week's treatment with metolazone 0.625 mg, 1.25 mg and 2.5 mg in combination with spironolactone 50 mg, and metolazone 2.5 alone were examined in a double-blind, crossover study in twelve healthy subjects. Spironolactone attenuated the hypokalaemia induced by metolazone-addition of spironolactone 50 mg to metolazone 2.5 mg raised plasma potassium by 0.18 mmol/l (P less than 0.025). In the presence of spironolactone, a linear log metolazone dose- plasma potassium response relationship (P less than 0.01) was demonstrated. Spironolactone was unable to compensate fully for metolazone's hypokalaemic effect although in combination with metolazone 0.625 mg and 1.25 mg, plasma potassium concentration was maintained close to pretreatment levels. The human bioassay employed provided conveniently quantitative information which allows the rational development of a fixed dose diuretic-spironolactone combination tablet. [ABSTRACT FROM AUTHOR]
- Published
- 1983
- Full Text
- View/download PDF
32. A Case of Varicose Aneurysm of the Aorta Communicating with the Pulmonary Artery
- Author
-
Clarke Jm
- Subjects
medicine.medical_specialty ,Pathology ,Aorta ,business.industry ,General Engineering ,General Medicine ,Articles ,Text mining ,Internal medicine ,Varicose aneurysm ,medicine.artery ,Pulmonary artery ,medicine ,Cardiology ,General Earth and Planetary Sciences ,business ,General Environmental Science - Published
- 1900
33. Cases of Biliary Colic Cured by the Administration of Olive Oil
- Author
-
Clarke Jm
- Subjects
medicine.medical_specialty ,business.industry ,General Engineering ,General Medicine ,Articles ,Biliary colic ,Bioinformatics ,Gastroenterology ,Internal medicine ,medicine ,General Earth and Planetary Sciences ,medicine.symptom ,business ,Administration (government) ,General Environmental Science ,Olive oil - Published
- 1895
34. The expression of hybrid vigour in Drosophila subobscura
- Author
-
John Maynard Smith, M. J. Hollingsworth, and Clarke Jm
- Subjects
education.field_of_study ,Natural selection ,Outbreeding depression ,Population ,General Engineering ,Heterozygote advantage ,Locus (genetics) ,Biology ,Drosophila subobscura ,Evolutionary biology ,Hybrid Vigor ,General Earth and Planetary Sciences ,Animals ,Drosophila ,Allele ,education ,General Environmental Science ,Hybrid - Abstract
By hybrid vigour we mean the possession by outbred organisms of a number of characters which would confer fitness in a wide range of environments. This definition deliberately includes both cases where heterozygous individuals are fitter in a Darwinian sense in the wild, and cases of species or other distant hybrids showing vigour in, for example, efficient utilization of food, long life, or high resistance to disease, although of low fitness because of infertility or for some other reason. Both types of phenomenon are well known, but whether it is convenient to consider them under the same heading will depend on the aspect of the problem being studied. For example, Dobzhansky (1950) preferred to divide hybrid vigour into ‘euheterosis’ as found in wild populations, and ‘luxuriance’ as exemplified in species hybrids. Such a distinction is a helpful one when the aspect studied is the role of natural selection in maintaining a balanced polymorphism in the wild. However, the high level of heterozygosity maintained by natural selection in many wild populations suggests that for many pairs of alleles the heterozygote is fitter than either homozygote. Where we have some knowledge of the mode of action of the different alleles present in a wild population at a given locus, as we have, for example, for the blood groups in man, it appears that different alleles produc qualitatively different substances. This has led to the suggestion that outbred organisms may be biochemically more versatile (Haldane 1948, 1954; Robertson & Reeve 1952). It is such versatility that all ‘hybrids’ may have in common, whether they result from outbreeding in the wild or from distant crosses made in the laboratory.
- Published
- 1955
35. Nocturnal Transpiration in Wheat
- Author
-
Rawson, HM, primary and Clarke, JM, additional
- Published
- 1988
- Full Text
- View/download PDF
36. The active constituent of spironolactone after acute administration in man [proceedings]
- Author
-
McInnes, GT, primary, Asbury, MJ, additional, Shelton, JR, additional, Harrison, IR, additional, Ramsay, LE, additional, Venning, GR, additional, and Clarke, JM, additional
- Published
- 1980
- Full Text
- View/download PDF
37. Hereditary Cerebellar Ataxy in Two Brothers
- Author
-
Clarke Jm
- Subjects
business.industry ,General Engineering ,General Earth and Planetary Sciences ,Medicine ,Articles ,General Medicine ,business ,Data science ,Genealogy ,General Environmental Science - Published
- 1902
- Full Text
- View/download PDF
38. The Argyll Robertson Sign in Cerebral and Spinal Syphilis
- Author
-
Clarke Jm
- Subjects
World Wide Web ,Information retrieval ,Computer science ,General Engineering ,medicine ,MEDLINE ,General Earth and Planetary Sciences ,Syphilis ,Original Articles ,General Medicine ,Login ,medicine.disease ,General Environmental Science - Published
- 1911
- Full Text
- View/download PDF
39. Obituary: Mona E. Going 1910-2003.
- Author
-
Clarke JM and Lewis JM
- Published
- 2003
- Full Text
- View/download PDF
40. Venous Thromboembolism Prophylaxis and Treatment in Patients With Cancer: American Society of Clinical Oncology Clinical Practice Guideline Update 2014
- Author
-
Leigh E. Gates, Margaret A. Tempero, Kari Bohlke, Nigel S. Key, Anna Falanga, Sandra L. Wong, Edward P. Balaban, Mark Levine, Jeffrey M. Clarke, Gary H. Lyman, Christopher R. Flowers, Nicole M. Kuderer, Agnes Y.Y. Lee, Alok A. Khorana, Ajay K. Kakkar, Mark R. Somerfield, Juan I. Arcelus, Charles W. Francis, Howard A. Liebman, Lyman, G, Bohlke, K, Khorana, A, Kuderer, N, Lee, A, Arcelus, J, Balaban, E, Clarke, J, Flowers, C, Francis, C, Gates, L, Kakkar, A, Key, N, Levine, M, Liebman, H, Tempero, M, Wong, S, Somerfield, M, Falanga, A, [Lyman,GH] Fred Hutchinson Cancer Research Center. University of Washington, Seattle, WA. [Kuderer,NM] University of Washington, Seattle, WA. [Bohlke,K, Somerfield,MR] American Society of Clinical Oncology, Alexandria, VA. [Khorana,AA] Cleveland Clinic, Cleveland, OH. [Lee,AY] University of British Columbia, Vancouver, British Columbia. [Levine,MN] McMaster University, Hamilton, Ontario, Canada. [Arcelus,JI] , Hospital Universitario Virgen de las Nieves. University of Granada, Granada, Spain. [Balaban,EP] Cancer Care Partnership, Mount Nittany Health and Penn State Hershey Cancer Institute, State College, PA. [Clarke,JM] Duke University Medical Center, Durham. [Key,NS] Lineberger Comprehensive Cancer Center, University of North Carolina, Chapel Hill, NC. [Flowers,CR] Emory University School of Medicine, Atlanta, GA. [Francis,CW] James P. Wilmot Cancer Center and University of Rochester, Rochester, NY. [Gates,LE] Patient Representative, Denver, CO. [Kakkar,AK] Thrombosis Research Institute, London, United Kingdom. [Liebman,HA] University of Southern California Keck School of Medicine. Norris Comprehensive Cancer Center, Los Angeles. [Tempero,MA] , University of California San Francisco Pancreas Center, San Francisco, CA. [Wong,SL] University of Michigan, Ann Arbor, MI. [Falanga,A] Hospital Papa Giovanni XXIII, Bergamo, Italy., K12, NHLBI NIH HHS, United States, and Juan Ignacio Arcelus Honoraria: sanofi-aventis, AspenBio Pharma HL087165
- Subjects
Cancer Research ,medicine.medical_specialty ,Venous Thromboembolism, Prophylaxis, and Treatment, Cancer ,Chemicals and Drugs::Organic Chemicals::Carboxylic Acids::Acids, Carbocyclic::Benzoic Acids::Hydroxybenzoic Acids::Salicylic Acids::Aspirin [Medical Subject Headings] ,MEDLINE ,Heparina de bajo-peso-molecular ,Organisms::Eukaryota::Animals::Chordata::Vertebrates::Mammals::Primates::Haplorhini::Catarrhini::Hominidae::Humans [Medical Subject Headings] ,Fibrinolytic Agents ,Pancreatic cancer ,Neoplasms ,Medicine ,Humans ,Aspirina ,Intensive care medicine ,Aspirin ,Chemicals and Drugs::Chemical Actions and Uses::Pharmacologic Actions::Therapeutic Uses::Hematologic Agents::Anticoagulants [Medical Subject Headings] ,business.industry ,Cancer ,Anticoagulants ,Chemicals and Drugs::Chemical Actions and Uses::Pharmacologic Actions::Molecular Mechanisms of Pharmacological Action::Fibrin Modulating Agents::Fibrinolytic Agents [Medical Subject Headings] ,Guideline ,Venous Thromboembolism ,Heparin, Low-Molecular-Weight ,Diseases::Neoplasms [Medical Subject Headings] ,medicine.disease ,Neoplasias ,Pulmonary embolism ,Anticoagulantes ,Oncology ,ASCO Special Articles ,Fibrinolíticos ,business ,Risk assessment ,Diseases::Cardiovascular Diseases::Vascular Diseases::Embolism and Thrombosis::Thromboembolism::Venous Thromboembolism [Medical Subject Headings] ,Fibrinolytic agent ,Tromboembolia venosa ,medicine.drug - Abstract
More information, including Data and Methodology Supplements, slidesets, and clinicaltools and resources,is available atwww.asco.org/ guidelines/vte. Patient information is available at www.cancer.net. Visit www.asco.org/guidelineswiki to provide comments on the guideline or to submit new evidence, Purpose To provide current recommendations about the prophylaxis and treatment of venous thromboembolism (VTE) in patients with cancer. Methods PubMed and the Cochrane Library were searched for randomized controlled trials, systematic reviews, meta-analyses, and clinical practice guidelines from November 2012 through July 2014. An update committee reviewed the identified abstracts. Results Of the 53 publications identified and reviewed, none prompted a change in the 2013 recommendations. Recommendations Most hospitalized patients with active cancer require thromboprophylaxis throughout hospitalization. Routine thromboprophylaxis is not recommended for patients with cancer in the outpatient setting. It may be considered for selected high-risk patients. Patients with multiple myeloma receiving antiangiogenesis agents with chemotherapy and/or dexamethasone should receive prophylaxis with either low–molecular weight heparin (LMWH) or low-dose aspirin. Patients undergoing major surgery should receive prophylaxis starting before surgery and continuing for at least 7 to 10 days. Extending prophylaxis up to 4 weeks should be considered in those undergoing major abdominal or pelvic surgery with high-risk features. LMWH is recommended for the initial 5 to 10 days of treatment for deep vein thrombosis and pulmonary embolism as well as for long-term secondary prophylaxis (at least 6 months). Use of novel oral anticoagulants is not currently recommended for patients with malignancy and VTE because of limited data in patients with cancer. Anticoagulation should not be used to extend survival of patients with cancer in the absence of other indications. Patients with cancer should be periodically assessed for VTE risk. Oncology professionals should educate patients about the signs and symptoms of VTE., Amgen (Inst), LEO Pharma, Bristol-Myers Squibb, Acerta (Inst), Infinity (Inst), Onyx Pharmaceuticals (Inst), Janssen Oncology (Inst), Gilead Sciences (Inst), Spectrum Pharmaceuticals (Inst), Celgene (Inst), TG Therapeutics (Inst), Genentech/Roche (Inst), Pharmacyclics (Inst), Eisai Inc, Bayer (Inst), Boehringer Ingelheim (Inst), Baxter Biosciences (Inst)
- Published
- 2015
- Full Text
- View/download PDF
41. Practical management of adverse events in patients receiving tarlatamab, a delta-like ligand 3-targeted bispecific T-cell engager immunotherapy, for previously treated small cell lung cancer.
- Author
-
Sands JM, Champiat S, Hummel HD, Paulson KG, Borghaei H, Alvarez JB, Carbone DP, Carlisle JW, Choudhury NJ, Clarke JM, Gadgeel SM, Izumi H, Navarro A, Lau SCM, Lammers PE, Huang S, Hamidi A, Mukherjee S, and Owonikoko TK
- Subjects
- Humans, Immunotherapy adverse effects, Immunotherapy methods, T-Lymphocytes immunology, T-Lymphocytes drug effects, Cytokine Release Syndrome drug therapy, Membrane Proteins, Small Cell Lung Carcinoma drug therapy, Small Cell Lung Carcinoma immunology, Lung Neoplasms drug therapy, Antibodies, Bispecific adverse effects, Antibodies, Bispecific therapeutic use
- Abstract
Tarlatamab is a bispecific T-cell engager immunotherapy targeting delta-like ligand 3 (DLL3) and the cluster of differentiation 3 (CD3) molecule. In the phase 2 DeLLphi-301 trial of tarlatamab for patients with previously treated small cell lung cancer, tarlatamab 10 mg every 2 weeks achieved durable responses and encouraging survival outcomes. Analyses of updated safety data from the DeLLphi-301 trial demonstrated that the most common treatment-emergent adverse events were cytokine release syndrome (53%), pyrexia (38%), decreased appetite (36%), dysgeusia (32%), and an emia (30%). Cytokine release syndrome was mostly grade 1 or 2 in severity, occurred primarily after the first or second tarlatamab dose, and was managed with supportive care, which included the administration of antipyretics (e.g., acetaminophen), intravenous hydration, and/or glucocorticoids. Other treatment-emergent adverse effects of interest included neutropenia (16%) and immune effector cell-associated neurotoxicity syndrome and associated neurologic events (10%). Given that tarlatamab is the first T-cell engager approved for the treatment of small cell lung cancer, raising awareness with regard to the monitoring and management of tarlatamab-associated adverse events is essential. Here, the authors describe the timing, occurrence, and duration of these adverse events and review the management and risk-mitigation strategies used by clinical investigators during the DeLLphi-301 trial., (© 2025 The Author(s). Cancer published by Wiley Periodicals LLC on behalf of American Cancer Society.)
- Published
- 2025
- Full Text
- View/download PDF
42. Complement factor H targeting antibody GT103 in refractory non-small cell lung cancer: a phase 1b dose escalation trial.
- Author
-
Clarke JM, Simon GR, Mamdani H, Gu L, Herndon JE 2nd, Stinchcombe TE, Ready N, Crawford J, Sonpavde G, Balevic S, Nixon AB, Campa M, Gottlin EB, Li H, Saxena R, He YW, Antonia S, and Patz EF Jr
- Subjects
- Humans, Male, Female, Middle Aged, Aged, Dose-Response Relationship, Drug, Adult, Aged, 80 and over, Antibodies, Monoclonal administration & dosage, Antibodies, Monoclonal pharmacokinetics, Antibodies, Monoclonal adverse effects, Antibodies, Monoclonal therapeutic use, Antibodies, Monoclonal, Humanized administration & dosage, Antibodies, Monoclonal, Humanized pharmacokinetics, Antibodies, Monoclonal, Humanized adverse effects, Antibodies, Monoclonal, Humanized therapeutic use, Carcinoma, Non-Small-Cell Lung drug therapy, Carcinoma, Non-Small-Cell Lung immunology, Lung Neoplasms drug therapy, Lung Neoplasms immunology, Maximum Tolerated Dose, Complement Factor H immunology
- Abstract
GT103 is a first-in-class, fully human, IgG3 monoclonal antibody targeting complement factor H that kills tumor cells and promotes anti-cancer immunity in preclinical models. We conducted a first-in-human phase 1b study dose escalation trial of GT103 in refractory non-small cell lung cancer to assess the safety of GT103 (NCT04314089). Dose escalation was performed using a "3 + 3" schema with primary objectives of determining safety, tolerability, PK profile and maximum tolerated dose (MTD) of GT103. Secondary objectives included describing objective response rate, progression-free survival and overall survival. Dose escalation cohorts included GT103 given intravenously at 0.3, 1, 3, 10, and 15 mg/kg every 3 weeks, and 10 mg/kg every 2 weeks. Thirty one patients were enrolled across 3 institutions. Two dose-limiting adverse events were reported: grade 3 acute kidney injury (0.3 mg/kg) and grade 2 colitis (1 mg/kg). No dose-limiting toxicities were noted at the highest dose levels and the MTD was not reached. No objective responses were seen. Stable disease occurred in 9 patients (29%) and the median overall survival was 25.7 weeks (95% confidence interval [CI], 19.1-30.6). Pharmacokinetic analysis confirmed an estimated half life of 6.5 days. The recommended phase 2 dose of GT103 was 10 mg/kg every 3 weeks, however further dose optimization is needed given the absence of an MTD. The study achieved its primary objective of demonstrating safety and tolerability of GT103 in refractory NSCLC., Competing Interests: Competing interests: This research was supported by Grid Therapeutics. Drs. Patz, Campa, and Gottlin have affiliation with both Grid Therapeutics and Duke University. JMC reports trial funding from Bristol-Myers Squibb, Genentech, Spectrum, Adaptimmune, AbbVie, Moderna, GlaxoSmithKline, Array, AstraZeneca, Grid Therapeutics, Abel Zeta, Pfizer; advisory/consulting from AstraZeneca, Merck, Pfizer, Spectrum, Genentech, Novartis, Turning Point, G1 Therapeutics, Vivacitas, Omega, Amgen, Corbus, Sanofi; speaking and travel from Merck and Amgen; DSMB from BioThera and G1 Therapeutics. GS reports speaking for Astra-Zeneca, consulting for Daiichi Sankyo, board member for Florida chapter of ASCO, and stock Options and consulting compensation for Onc.AI. HM reports advisory board for AstraZeneca, Genentech, and Daiichi Sankyo; and research funding from AstraZeneca. TS reports clinical trial funding from AstraZeneca, Seagen, Mirati Therapeutics, Genentech/Roche, Nuvalent, Inc.; consulting from Takeda, G1 Therapeutics, Spectrum Pharmaceuticals, Gilead Sciences, AstraZeneca, Coherus Biosciences, Blueprint Medicines, Boehringer Ingelheim, Pfizer, Abbvie; travel funding from Pfizer; DSMB participation from Genentech. NR reports advisory compensation from BMS, Merck, Jazz, Genentech, Daiichi, Regeneron, ABBVIE, research funding Merck, Regeneron, and speaking from Jazz. JC reports Scientific Advisor from Actimed, Enzychem, Gen Sci, Pfizer, Tensegrity; DSMB Member of BioAtla, G1 Therapeutics; PI/Institutional Research Funding for AstraZeneca, Helsinn, Pfizer, NCI/NCTN; Publications Committee of Amgen, Frensenius-Kabi, G1, Pfizer. GS reports advisory board from EMD Serono, BMS, Merck, Seattle Genetics, Astellas, Janssen, Bicycle Therapeutics, Pfizer, Gilead, Scholar Rock, Eli Lilly, Loxo Oncology, Vial, Aktis, Daiichi-Sankyo; Consultant/Scientific Advisory Board (SAB)/trial steering committee: Syapse, Merck, Servier, Syncorp, Ellipses; Research Support to institution from EMD Serono, Jazz Therapeutics, Bayer, Sumitomo Pharma, Blue Earth Diagnostics; Speaker from Seagen, Gilead, Natera, Exelixis, Janssen, Astellas, Bayer, Aveo, Pfizer, Merck; Data safety monitoring committee (honorarium) from Mereo; Employment: Spouse employed by Myriad, Exact Sciences; and Travel: BMS, Astellas. SB receives support from the National Institutes of Health, the Childhood Arthritis and Rheumatology Research Alliance (CARRA), serves on an NIH DSMB, and consults for UCB (Morrisville, NC, USA), CARRA, and Rutgers University. Stephen Balevic is a member of the American College of Rheumatology, the Childhood Arthritis and Rheumatology Research Alliance (CARRA), Alpha Omega Alpha, the American Society of Clinical Investigators, and the Society for Pediatric Research, and served as the Assistant Scientific Director for CARRAAN reports funding from Genentech, Genmab, MedImmune/AstraZeneca, Seattle Genetics; consulting from Sanofi, Promega; SAB from Leap Therapeutics; NCI Chair, Core Correlatives Sciences Committee (NCTN-CCSC); and patents of No 925592 and No. 62/337,633. MC is a founder of Grid Therapeutics, LLC and is on the advisory board. EBG is a founder of Grid Therapeutics, LLC. SA reports being member of scientific advisory boards for Cellepus Therapeutics (and Co-founder), Leap Therapeutics, Guardian Bio, Immutep, Shoreline Therapeutics, Tubulis, Xilis, Glympse Bio, Achilles Therapeutics, Memgen, RAPT Biotherapeutics. EFP is a founder, CEO and on the BOD of Grid Therapeutics, LLC. All other authors report no competing interests., (© 2024. The Author(s).)
- Published
- 2025
- Full Text
- View/download PDF
43. T-cell Responses to Individualized Neoantigen Therapy mRNA-4157 (V940) Alone or in Combination with Pembrolizumab in the Phase 1 KEYNOTE-603 Study.
- Author
-
Gainor JF, Patel MR, Weber JS, Gutierrez M, Bauman JE, Clarke JM, Julian R, Scott AJ, Geiger JL, Kirtane K, Robert-Tissot C, Coder B, Tasneem M, Sun J, Zheng W, Gerbereux L, Laino A, Porichis F, Pollard JR, Hou P, Sehgal V, Chen X, Morrissey M, Daghestani HN, Feldman I, Srinivasan L, Frederick JP, Brown M, Aanur P, Meehan R, and Burris HA 3rd
- Subjects
- Humans, Middle Aged, Female, Male, Aged, T-Lymphocytes immunology, Skin Neoplasms drug therapy, Skin Neoplasms immunology, Precision Medicine methods, Adult, Antineoplastic Agents, Immunological therapeutic use, Antineoplastic Agents, Immunological pharmacology, Antibodies, Monoclonal, Humanized therapeutic use, Antigens, Neoplasm immunology, Carcinoma, Non-Small-Cell Lung drug therapy, Carcinoma, Non-Small-Cell Lung immunology, Lung Neoplasms drug therapy, Lung Neoplasms immunology, Melanoma drug therapy, Melanoma immunology
- Abstract
mRNA-4157 (V940) is an individualized neoantigen therapy targeting up to 34 patient-specific tumor neoantigens to induce T-cell responses and potentiate antitumor activity. We report mechanistic insights into the immunogenicity of mRNA-4157 via characterization of T-cell responses to neoantigens from the first-in-human, phase 1, KEYNOTE-603 study (NCT03313778) in patients with resected non-small cell lung cancer (Part A: 1-mg mRNA-4157, n = 4) or resected cutaneous melanoma (Part D: 1-mg mRNA-4157 + 200-mg pembrolizumab, n = 12). Safety, tolerability, and immunogenicity were assessed. All patients experienced ≥1 treatment-emergent adverse event; there were no grade 4/5 adverse events or dose-limiting toxicities. mRNA-4157 alone induced consistent de novo and strengthened preexisting T-cell responses to targeted neoantigens. Following combination therapy, sustained mRNA-4157-induced neoantigen-specific T-cell responses and expansion of cytotoxic CD8 and CD4 T cells were observed. These findings show the potential of a novel mRNA individualized neoantigen therapy approach in oncology. Significance: The safety and immunogenicity results from this phase 1 study of mRNA-4157 as adjuvant monotherapy or combination therapy with pembrolizumab show generation of de novo and enhancement of existing neoantigen-specific T-cell responses and provide mechanistic proof of concept to support further development of mRNA-4157 for patients with resected solid tumors. See related commentary by Berraondo et al., p. 2021., (©2024 American Association for Cancer Research.)
- Published
- 2024
- Full Text
- View/download PDF
44. May Measurement Month 2021: an analysis of blood pressure screening results from the Philippines.
- Author
-
Mina ABC, David-Ona DI, Bonzon DD, Vilela GC, Balmores BA, Co MT, Mercado-Asis LB, Castillo RR, Abasolo-Lao EM, Dela Cruz PB, Rabago NPG, Poulter NR, Beaney T, Clarke JM, and Diaz ABF
- Abstract
The Philippine Society of Hypertension (PSH) took part again in the annual May Measurement Month 2021 (MMM21) blood pressure (BP) campaign to raise awareness of hypertension. The MMM standard protocol designed by the MMM coordinating centre was used during screening. These included the collection of basic data on demography, lifestyle, and environmental factors. Standardized sitting BP measurements were taken three times, using automated BP apparatus and were either entered via MMM21 app, MMM@Home, and Google Forms or recorded on paper and transferred to Excel spreadsheets by PSH encoders. Hypertension was defined either as systolic BP ≥ 140 mmHg or diastolic BP ≥ 90 mmHg or on antihypertensive medication. A total of 59 655 participated through opportunistic convenience sampling. After multiple imputation, a total of 26 813 (44.9%) participants were identified as having hypertension. Of these, 14 449 (53.9%) were aware and 12 978 (48.4%) were on antihypertensive medication. Of those who were treated, 5644 (43.5%) had controlled BP (<140/90 mmHg) and 7334 (56.5%) were uncontrolled. These latest local data showed that BP awareness is still low with BP control achieved in less than half of treated patients. Continued collaboration is needed to improve BP screening programmes in the country., Competing Interests: Conflict of interest: none declared., (© The Author(s) 2024. Published by Oxford University Press on behalf of the European Society of Cardiology.)
- Published
- 2024
- Full Text
- View/download PDF
45. Differences in microenvironment of lung cancer and pleural effusions by single-cell RNA sequencing.
- Author
-
Mahmood K, Wang H, Ji Z, Giovacchini CX, Wahidi MM, Dorry M, Shofer SL, Clarke JM, Antonia SJ, Shaz BH, Steadman K, Weinhold KJ, and Yi J
- Subjects
- Humans, Male, Female, CD8-Positive T-Lymphocytes immunology, Aged, Middle Aged, CD4-Positive T-Lymphocytes immunology, Sequence Analysis, RNA, Biopsy, Pleural Effusion pathology, Pleural Effusion genetics, Pleural Effusion, Malignant genetics, Pleural Effusion, Malignant pathology, Prospective Studies, Lung Neoplasms genetics, Lung Neoplasms pathology, Tumor Microenvironment immunology, Tumor Microenvironment genetics, Single-Cell Analysis methods
- Abstract
Background: Direct comparison of tumor microenvironment of matched lung cancer biopsies and pleural effusions (PE) from the same patients is critical in understanding tumor biology but has not been performed. This is the first study to compare the lung cancer and PE microenvironment by single-cell RNA sequencing (scRNA-seq)., Methods: Matched lung cancer biopsies and PE were obtained prospectively from ten patients. We isolated CD45
+ cells and performed scRNA-seq to compare the biopsies and PE., Results: PE had a higher proportion of CD4+ T cells but lower proportion of CD8+ T cells (False detection rate, FDR = 0.0003) compared to biopsies. There was a higher proportion of naïve CD4+ T cells (FDR = 0.04) and naïve CD8+ T cells (FDR = 0.0008) in PE vs. biopsies. On the other hand, there was a higher proportion of Tregs (FDR = 0.04), effector CD8+ (FDR = 0.006), and exhausted CD8+ T cells (FDR = 0.01) in biopsies. The expression of inflammatory genes in T cells was increased in biopsies vs. PE, including TNF, IFN-ɣ, IL-1R1, IL-1R2, IL-2, IL-12RB2, IL-18R1, and IL-18RAP (FDR = 0.009, 0.013, 0.029, 0.043, 0.009, 0.013, 0.004, and 0.003, respectively). The gene expression of exhaustion markers in T cells was also increased in tumor biopsies including PDCD1, CTLA4, LAG 3, HAVCR2, TIGIT, and CD160 (FDR = 0.008, 0.003, 0.002, 0.011, 0.006, and 0.049, respectively)., Conclusions: There is a higher proportion of naïve T cells and lower proportion of exhausted T cells and Tregs in PE compared to lung cancer biopsies, which can be leveraged for prognostic and therapeutic applications., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 Elsevier B.V. All rights reserved.)- Published
- 2024
- Full Text
- View/download PDF
46. All Aboard: Towards Standardisation of Surgical Resident Onboarding.
- Author
-
Kovoor JG, Bacchi S, Nann SD, Luo Y, Stretton B, Gupta AK, Zaka A, Warren LR, Clarke JM, Gluck S, Vanlint AS, Chan W, and Marshall-Webb M
- Subjects
- Humans, Clinical Competence, Education, Medical, Graduate, Internship and Residency, General Surgery education
- Published
- 2024
- Full Text
- View/download PDF
47. Absorbable Biosynthetic Scaffolds in Place of Silicone for Breast Reconstruction: A 9-Year Experience with 53 Patients.
- Author
-
Rehnke RD, Clarke JM, Goodrum AJ, and Badylak SF
- Abstract
Background: Few series report on using fat grafting as the primary form of breast reconstruction. A 9-year experience with absorbable biosynthetic scaffolds, used in place of silicone implants, for breast reconstruction is reviewed., Methods: A clinical quality improvement approach was used to evaluate real-world data on a single plastic surgeon's experience treating breast reconstruction patients over a 7-year period., Results: Fifty-three patients had 74 breasts reconstructed, (following 51 therapeutic mastectomies and 23 prophylactic). Five of the 51 breasts (9.80 %) developed a local recurrence (mean follow-up of 4.5-5.5 years). This compared favorably with the practice's previous 6 years of silicone reconstructions. The most common complications were benign fat necrosis and oil cysts. More than 100 radiologic examinations were performed without interference by the absorbable implants. By 12-18 months post implantation, very little immune response was seen on histologic examinations of the biosynthetic scaffold constructs. Mature collagen and robust vascularity characterized the "mesh zone," whereas regenerated adipose tissue was seen in between and on top of the folded sheets of the implants. The average number of fat graft sessions in immediate reconstructions was 2.3, with a mean total fat graft volume of 551 mL, to restore an average mastectomy defect volume of 307 mL. Aesthetic outcomes were much better in the immediate reconstruction of nipple-sparing mastectomy group, which saw 68% achieve an A/B grade; 19%, C grade; and 13%, D/F on subjective grading., Conclusion: This composite strategy, using biosynthetic scaffold and autologous fat grafting, yielded outcomes equivalent to flap reconstructions with the ease of implants., Competing Interests: Dr. Rehnke is a paid consultant for Becton Dickinson (BD) and has sold intellectual property on absorbable implants to BD. Dr. Rehnke is also a paid consultant for Ricoh, USA, related to their three-dimensional modeling technology, used in preoperative planning for surgical treatment of patients with breast cancer. Dr. Badylak has received research funding from BD. Drs. Clarke and Goodrum have no financial interest to declare in relation to the content of this article. This work received no outside private or public funding., (Copyright © 2024 The Authors. Published by Wolters Kluwer Health, Inc. on behalf of The American Society of Plastic Surgeons.)
- Published
- 2024
- Full Text
- View/download PDF
48. Identifying MAGE-A4-positive tumors for TCR T cell therapies in HLA-A∗02-eligible patients.
- Author
-
Wang T, Navenot JM, Rafail S, Kurtis C, Carroll M, Van Kerckhoven M, Van Rossom S, Schats K, Avraam K, Broad R, Howe K, Liddle A, Clayton A, Wang R, Quinn L, Sanderson JP, McAlpine C, Carozza C, Pimpinella E, Hsu S, Brophy F, Elefant E, Bayer P, Williams D, Butler MO, Clarke JM, Gainor JF, Govindan R, Moreno V, Johnson M, Tu J, Hong DS, and Blumenschein GR Jr
- Abstract
T cell receptor (TCR) T cell therapies target tumor antigens in a human leukocyte antigen (HLA)-restricted manner. Biomarker-defined therapies require validation of assays suitable for determination of patient eligibility. For clinical trials evaluating TCR T cell therapies targeting melanoma-associated antigen A4 (MAGE-A4), screening in studies NCT02636855 and NCT04044768 assesses patient eligibility based on: (1) high-resolution HLA typing and (2) tumor MAGE-A4 testing via an immunohistochemical assay in HLA-eligible patients. The HLA/MAGE-A4 assays validation, biomarker data, and their relationship to covariates (demographics, cancer type, histopathology, tissue location) are reported here. HLA-A∗02 eligibility was 44.8% (2,959/6,606) in patients from 43 sites across North America and Europe. While HLA-A∗02:01 was the most frequent HLA-A∗02 allele, others (A∗02:02, A∗02:03, A∗02:06) considerably increased HLA eligibility in Hispanic, Black, and Asian populations. Overall, MAGE-A4 prevalence based on clinical trial enrollment was 26% (447/1,750) across 10 solid tumor types, and was highest in synovial sarcoma (70%) and lowest in gastric cancer (9%). The covariates were generally not associated with MAGE-A4 expression, except for patient age in ovarian cancer and histology in non-small cell lung cancer. This report shows the eligibility rate from biomarker screening for TCR T cell therapies and provides epidemiological data for future clinical development of MAGE-A4-targeted therapies., Competing Interests: T.W., J.-M.N., S.R., C.K., M.C., R.B., K.H., A.L., A.C., R.W., L.Q., J.P.S., C.M., F.B., E.E., P.B., and D.W. are or were employees of Adaptimmune at the time of the study and may own stock/stock options in Adaptimmune. M.V.K., S.V.R., K.S., and K.A. are employees of CellCarta NV, Antwerp, Belgium, and were involved in the development and validation of the MAGE-A4 IHC assay. G.B.J. received consulting fees from AbbVie, Daiichi Sankyo, Eli Lilly, Genzyme, Gilead, Merck Sharp & Dohme, Novartis, Regeneron; expenses from Regeneron; research funding from AstraZeneca, BeiGene, Bristol Myers Squibb, Daiichi Sankyo, Exelixis, Genentech, Incyte, Merck Sharp & Dohme, Novartis, Regeneron. M.O.B. received grant support from Merck, Takara Bio; quality improvement support from Novartis; is on the advisory board of Adaptimmune, Bristol Myers Squibb, GlaxoSmithKline, IDEAYA, Instil Bio, Iovance, La Roche Possey, Medison, Merck, Novartis, Pfizer, Regeneron, Sanofi, Sun Pharma; oral presentations given for Bristol Myers Squibb, Merck, Novartis, Pfizer, Sanofi. J.M.C. received grant/research support from AbbVie, Adaptimmune, Array, AstraZeneca, Bayer, Bristol Myers Squibb, CBMG, Genentech, GlaxoSmithKline, Grid Therapeutics, Medpacto, Moderna, Spectrum; consultant for Amgen, Corbus, G1 Therapeutics, Novartis, Omega, Sanofi, Turning Point, Vivacitas; speaker’s bureau for AstraZeneca. J.F.G. was compensated consultant or received honoraria from AI Proteins, AstraZeneca, Blueprint Medicines, Bristol Myers Squibb, Curie Therapeutics, Genentech/Roche, Gilead, iTeos, Jounce, Karyopharm, Loxo/Lilly, Merck, Merus Pharmacueticals, Mirati, Moderna, Novartis, Novocure, Nuvalent, Pfizer, Silverback Therapeutics, Takeda; research support from Genentech/Roche, Novartis, Takeda; institutional research support from Adaptimmune, Alexo, Array Biopharma, Bristol Myers Squibb, Blueprint Medicines, Jounce, Merck, Moderna, Novartis, Palleon, Tesaro; equity in AI Proteins; and has an immediate family member who is an employee with equity at Ironwood Pharmaceuticals. V.M. received consulting fees from Affimed, AstraZeneca, Bayer, Bristol Myers Squibb, Janssen, Roche, Syneos; was principal investigator – institutional funding from AbbVie, AceaBio, Adaptimmune, ADC Therapeutics, Aduro, Agenus, Amcure, Amgen, Astellas, AstraZeneca, Bayer, BeiGene, BioInvent International AB, Bristol Myers Squibb, Boehringer, Boston, Celgene, Daichii Sankyo, DEBIOPHARM, Eisai, e-Terapeutics, Exelisis, Forma Therapeutics, Genmab, GlaxoSmithKline, Harpoon, Hutchison, Immutep, Incyte, Inovio, Iovance, Janssen, Kyowa Kirin, Lilly, Loxo, MedSir, Menarini, Merck, Merus, Millennium, MSD, Nanobiotix, Nektar, Novartis, Odonate Therapeutics, Pfizer, Pharma Mar, PharmaMar, Principia, PsiOxus, Puma, Regeneron, Rigontec, Roche, Sanofi, Sierra Oncology, Synthon, Taiho, Takeda, Tesaro, Transgene, Turning Point Therapeutics, Upshersmith. M.J. received research funding (institutional) from AbbVie, Acerta, Adaptimmune, Amgen, Apexigen, Arcus Biosciences, Array BioPharma, Artios Pharma, AstraZeneca, Atreca, BeiGene, BerGenBio, BioAtla, Black Diamond, Boehringer Ingelheim, Bristol Myers Squibb, Calithera Biosciences, Carisma Therapeutics, Checkpoint Therapeutics, City of Hope National Medical Center, Corvus Pharmaceuticals, Curis, CytomX, Daiichi Sankyo, Dracen Pharmaceuticals, Dynavax, Eli Lilly, Elicio Therapeutics, EMD Serono, EQRx, Erasca, Exelixis, Fate Therapeutics, Genentech/Roche, Genmab, Genocea Biosciences, GlaxoSmithKline, Gritstone Oncology, Guardant Health, Harpoon, Helsinn Healthcare SA, Hengrui Therapeutics, Hutchison MediPharma, IDEAYA Biosciences, IGM Biosciences, Immunitas Therapeutics, Immunocore, Incyte, Janssen, Jounce Therapeutics, Kadmon Pharmaceuticals, Kartos Therapeutics, Loxo Oncology, Lycera, Memorial Sloan Kettering, Merck, Merus, Mirati Therapeutics, Mythic Therapeutics, NeoImmune Tech, Neovia Oncology, Novartis, Numab Therapeutics, Nuvalent, OncoMed Pharmaceuticals, Palleon Pharmaceuticals, Pfizer, PMV Pharmaceuticals, Rain Therapeutics, RasCal Therapeutics, Regeneron Pharmaceuticals, Relay Therapeutics, Revolution Medicines, Ribon Therapeutics, Rubius Therapeutics, Sanofi, Seven and Eight Biopharmaceuticals/Birdie Biopharmaceuticals, Shattuck Labs, Silicon Therapeutics, Stem CentRx, Syndax Pharmaceuticals, Takeda Pharmaceuticals, Tarveda, TCR2 Therapeutics, Tempest Therapeutics, Tizona Therapeutics, TMUNITY Therapeutics, Turning Point Therapeutics, University of Michigan, Vyriad, WindMIL Therapeutics, Y-mAbs Therapeutics; had a consulting/advisory role (institutional) for AbbVie, Amgen, Arcus Biosciences, Arrivent, Astellas, AstraZeneca, Black Diamond, Boehringer Ingelheim, Calithera Biosciences, Daiichi Sankyo, EcoR1, Genentech/Roche, Genmab, Genocea Biosciences, Gilead Sciences, GlaxoSmithKline, Gritstone Oncology, Ideaya Biosciences, Immunocore, iTeos, Janssen, Jazz Pharmaceuticals, Merck, Mirati Therapeutics, Molecular Axiom, Normunity, Novartis, Oncorus, Pyramid Biosciences, Regeneron Pharmaceuticals, Revolution Medicines, Sanofi-Aventis, SeaGen, Synthekine, Takeda Pharmaceuticals, Turning Point Therapeutics, VBL Therapeutics. D.S.H. received travel, accommodations, expenses from AACR, ASCO, CLCC, Bayer, Genmab, SITC, Telperian; had consulting, speaker, or advisory role with 28Bio, AbbVie, Acuta, Adaptimmune, Alkermes, Alpha Insights, Amgen, Affini-T, Astellas, Aumbiosciences, Axiom, Baxter, Bayer, Boxer Capital, BridgeBio, CARSgen, CLCC, COG, COR2ed, Cowen, EcoR1, Erasca, Fate Therapeutics, F. Hoffmann-La Roche, Genentech, Gennao Bio, Gilead, GLG, Group H, Guidepoint, HCW Precision Oncology, Immunogenesis, InduPro, Janssen, Liberium, MedaCorp, Medscape, Numab, Oncologia Brasil, ORI Capital, Pfizer, Pharma Intelligence, POET Congress, Prime Oncology, Projects in Knowledge, Quanta, RAIN, Ridgeline, SeaGen, Stanford, STCube, Takeda, Tavistock, Trieza Therapeutics, Turning Point Therapeutics, WebMD, YingLing Pharma, Ziopharm; has other ownership interests in Molecular Match (advisor), OncoResponse (founder, advisor), Telperian (founder, advisor); received institutional research/grant funding from AbbVie, Adaptimmune, Adlai-Nortye, Amgen, AstraZeneca, Bayer, Biomea, Bristol Myers Squibb, Daiichi Sankyo, Deciphera, Eisai, Eli Lilly, Endeavor, Erasca, F. Hoffmann-La Roche, Fate Therapeutics, Genentech, Genmab, Immunogenesis, Infinity, Kyowa Kirin, Merck, Mirati, Navier, NCI-CTEP, Novartis, Numab, Pfizer, Pyramid Bio, Revolution Medicine, SeaGen, STCube, Takeda, TCR2, Turning Point Therapeutics, VM Oncology., (© 2024 The Authors.)
- Published
- 2024
- Full Text
- View/download PDF
49. Unique genomic alterations in the circulating tumor DNA of patients with solid tumors brain metastases.
- Author
-
Alder L, Broadwater G, Green M, Van Swearingen AED, Lipp ES, Clarke JM, Anders CK, and Sammons S
- Abstract
Background: Although serum circulating tumor DNA (ctDNA) is routine, data from patients with brain metastases (BrMs) is limited. We assessed genomic alterations in ctDNA from patients with solid tumor BrMs in 3 groups: Isolated BrMs with stable extracranial disease (iCNS), concurrent brain and extracranial progression (cCNS), and extracranial progression with no active BrMs (eCNS). We also compared ctDNA alterations between patients with and without BrMs., Methods: Patients with a Guardant360 ctDNA profile with ( n = 253) and without BrMs ( n = 449) from the Duke Molecular Registry between January 2014 and December 2020 were identified. Actionable alterations were defined as FDA-recognized or standard-of-care biomarkers. Disease status was determined via investigator assessment within 30 days of ctDNA collection., Results: Among the 253 patients with BrMs: 29 (12%) had iCNS, 160 (63%) cCNS, and 64 (25%) eCNS. Breast (BC; 12.0%) and non-small cell lung cancer (NSCLC; 76.4%) were the most common tumor types. ESR1 (60% vs 25%, P < .001) and BRCA2 (17% vs 5%, P = .022) were more frequent in BC BrMs. In NSCLC BrMs, EGFR alterations were most frequent in the iCNS group (iCNS: 67%, cCNS: 40%, eCNS:37%, P = .08) and in patients with BrMs (36% vs 17%, P < .001). Sequencing from both brain tissue and ctDNA were available for 8 patients; 7 (87.5%) had identical alterations., Conclusions: This study illustrates the feasibility of detecting alterations from ctDNA among patients with BrMs. A higher frequency of actionable mutations was observed in ctDNA in patients with BrMs. Additional studies comparing ctDNA and alterations in BrMs tissue are needed to determine if ctDNA can be considered a surrogate to support treatment decisions., Competing Interests: No disclaimers. No funding., (© The Author(s) 2024. Published by Oxford University Press, the Society for Neuro-Oncology and the European Association of Neuro-Oncology.)
- Published
- 2024
- Full Text
- View/download PDF
50. Long-Term Intracranial Outcomes With Combination Dual Immune-Checkpoint Blockade and Stereotactic Radiosurgery in Patients With Melanoma and Non-Small Cell Lung Cancer Brain Metastases.
- Author
-
Vaios EJ, Shenker RF, Hendrickson PG, Wan Z, Niedzwiecki D, Winter SF, Shih HA, Dietrich J, Wang C, Salama AKS, Clarke JM, Allen K, Sperduto P, Mullikin T, Kirkpatrick JP, Floyd SR, and Reitman ZJ
- Subjects
- Humans, Immune Checkpoint Inhibitors, Retrospective Studies, Carcinoma, Non-Small-Cell Lung radiotherapy, Melanoma radiotherapy, Radiosurgery methods, Lung Neoplasms radiotherapy, Lung Neoplasms etiology, Brain Neoplasms secondary
- Abstract
Purpose: The intracranial benefit of offering dual immune-checkpoint inhibition (D-ICPI) with ipilimumab and nivolumab to patients with melanoma or non-small cell lung cancer (NSCLC) receiving stereotactic radiosurgery (SRS) for brain metastases (BMs) is unknown. We hypothesized that D-ICPI improves local control compared with SRS alone., Methods and Materials: Patients with melanoma or NSCLC treated with SRS from 2014 to 2022 were evaluated. Patients were stratified by treatment with D-ICPI, single ICPI (S-ICPI), or SRS alone. Local recurrence, intracranial progression (IP), and overall survival were estimated using competing risk and Kaplan-Meier analyses. IP included both local and distant intracranial recurrence., Results: Two hundred eighty-eight patients (44% melanoma, 56% NSCLC) with 1,704 BMs were included. Fifty-three percent of patients had symptomatic BMs. The median follow-up was 58.8 months. Twelve-month local control rates with D-ICPI, S-ICPI, and SRS alone were 94.73% (95% CI, 91.11%-96.90%), 91.74% (95% CI, 89.30%-93.64%), and 88.26% (95% CI, 84.07%-91.41%). On Kaplan-Meier analysis, only D-ICPI was significantly associated with reduced local recurrence (P = .0032). On multivariate Cox regression, D-ICPI (hazard ratio [HR], 0.4003; 95% CI, 0.1781-0.8728; P = .0239) and planning target volume (HR, 1.022; 95% CI, 1.004-1.035; P = .0059) correlated with local control. One hundred seventy-three (60%) patients developed IP. The 12-month cumulative incidence of IP was 41.27% (95% CI, 30.27%-51.92%), 51.86% (95% CI, 42.78%-60.19%), and 57.15% (95% CI, 44.98%-67.59%) after D-ICPI, S-ICPI, and SRS alone. On competing risk analysis, only D-ICPI was significantly associated with reduced IP (P = .0408). On multivariate Cox regression, D-ICPI (HR, 0.595; 95% CI, 0.373-0.951; P = .0300) and presentation with >10 BMs (HR, 2.492; 95% CI, 1.668-3.725; P < .0001) remained significantly correlated with IP. The median overall survival after D-ICPI, S-ICPI, and SRS alone was 26.1 (95% CI, 15.5-40.7), 21.5 (16.5-29.6), and 17.5 (11.3-23.8) months. S-ICPI, fractionation, and histology were not associated with clinical outcomes. There was no difference in hospitalizations or neurologic adverse events between cohorts., Conclusions: The addition of D-ICPI for patients with melanoma and NSCLC undergoing SRS is associated with improved local and intracranial control. This appears to be an effective strategy, including for patients with symptomatic or multiple BMs., (Copyright © 2023 Elsevier Inc. All rights reserved.)
- Published
- 2024
- Full Text
- View/download PDF
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.