4,290 results on '"Clavaria"'
Search Results
2. Clavaria viriditincta Krishnapriya & T. K. A. Kumar 2023, sp. nov
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Kumar, T. K. Arun
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Agaricomycetes ,Clavariaceae ,Clavaria ,Basidiomycota ,Clavaria viriditincta ,Fungi ,Biodiversity ,Agaricales ,Taxonomy - Abstract
Clavaria viriditincta Krishnapriya & T.K.A. Kumar, sp. nov. (Fig. 1) MycoBank no:—MB846541 Type:— INDIA. Kerala State, University of Calicut campus (11.11 oN, 75.89 oE, altitude 32 m), 06 June 2022, Krishnapriya K., (holotype, ZGCKP247). Etymology:—‘ viriditincta’ refers to the green colour of the basidiomata. Diagnosis:— Clavaria viriditincta differs from other Clavaria species by its large, distinclty green basidiomata, ellipsoid basidiospores (6–7 × 4–5 µm), and inflated hyphae with ampulliform septal swellings. Description:— Basidiomata 30–80 × 3–5 mm, simple, unbranched, cylindrical, solid when young, becoming fistulose with age, terete in cross section, apex acute to subacute, glabrous, fertile throughout, deep green, darker at the extreme apex, no colour change on bruising, context fleshy, without any distinct odour, no colour reaction in Fe 3 Cl and KOH. Basidiospores 6–7 × 4–5 µm (Q =1.2–1.7 µm, Q m =1.4 µm), ellipsoid, smooth, thin-walled, hyaline, guttulate, apiculus prominent (up to 1 µm long), inamyloid, cyanophilic in cotton blue. Basidia 30–40 × 7–8 µm, agguttulate, clavate, without basal clamp-connection, sterigmata 4 (up to 5 µm long). Hymenium 20–30 µm wide. Subhymenium 40–50 µm wide. Context composed of generative hyphae, 4–10 µm wide, inflated up to 20 µm wide, interwoven, septate, with ampulliform septal swellings, hyaline, thick-walled (up to 1 µm, inamyloid, cyanophilic in cotton blue. Hyphal clamp-connections absent. Habitat and distribution:—on soil, among leaf litter, gregarious. This species was collected from an area dominated by Hevea brasiliensis. Additional specimens examined:— INDIA. Kerala State, Malappuram District, University of Calicut campus, alt. 32 m, 06 June 2022, Krishnapriya K., (ZGCKP247 A).
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- 2023
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3. Circumscription and phylogeny of the Lepidostromatales (lichenized Basidiomycota) following discovery of new species from China and Africa.
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Liu, Dong, Goffinet, Bernard, Ertz, Damien, De Kesel, André, Wang, Xinyu, Hur, Jae-Seoun, Shi, Haixia, Zhang, Yanyun, Yang, Meixia, and Wang, Lisong
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BASIDIOMYCETES , *RIBOSOMAL DNA , *PHYLOGENY , *CLAVARIA , *LICHENS - Abstract
Based on an exhaustive sampling of all known Lepidostromatales, a lineage of clavarioid lichen-forming basidiomycetes, we assess (i) the phylogenetic affinities of the six Chinese species currently accommodated inMulticlavula(Cantharellales) based on inferences from the 18S and 28S subunits of the nuclear ribosomal DNA repeat and (ii) the phylogenetic structure among Chinese populations of Lepidostromatales, based on the nuc rDNA ITS1-5.8S-ITS2 (internal transcribed spacer [ITS]) regions.Multiclavula fossicolaandM. sinensisbelong to the Lepidostromatales and are transferred toSulzbacheromyces. Chinese reports ofM. claraandM. vernalisbelong to species of Lepidostromatales, and specimens identified asM. mucidabelong to the nonlichenized genusClavaria. Hence, evidence ofMulticlavulaoccurring in China is lacking. Similarly,L. calocerumis excluded from the Chinese flora. The recently describedL. asianumshould be regarded as conspecific withS. sinensis. Three new species ofSulzbacheromycesare described:S. bicolorandS. yunnanensisfrom China andS. miomboensisfrom the Democratic Republic of Congo. Consequently,Sulzbacheromycesis new to Asia and Africa. A worldwide key to the species of Lepidostromatales is provided. [ABSTRACT FROM AUTHOR]
- Published
- 2017
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4. Contribution to the Knowledge of Ramariopsis subarctica (Clavariaceae, Basidiomycota).
- Author
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Halama, Marek, Pech, Paweł, and Shiryaev, Anton G.
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CLAVARIACEAE , *CLAVARIA , *CLAVULINOPSIS , *MOUNTAIN plants , *PLANT populations - Abstract
Although general knowledge of Ramariopsis subarctica Pilát has advanced in the past four decades, there is still little understanding of how the species is distributed and which aspects of the environment determine its distribution. This paper presents the first Polish collections of the species. Hitherto unknown in Poland, R. subarctica is reported from two localities in subalpine belts of the West Tatra Mts and Karkonosze Mts. The morphology of newly collected basidiomata of the fungus is described, illustrated and commented, and some basic chemical parameters of its habitat in the Karkonosze Mts are given. All available published material relevant to the global distribution and ecology of R. subarctica is reviewed. [ABSTRACT FROM AUTHOR]
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- 2017
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5. Two new species of Clavaria (Agaricales, Basidiomycota) from Central China
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Xiao-Yan Wang, Xiao-Hui Wang, Jun Yan, Ping Zhang, and Zuo-Hong Chen
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Herbarium ,Genus ,Botany ,Clavaria ,Agaricales ,Key (lock) ,Clavariaceae ,Taxonomy (biology) ,Plant Science ,Biology ,Internal transcribed spacer ,biology.organism_classification ,Ecology, Evolution, Behavior and Systematics - Abstract
Species of Clavaria (Clavariaceae, Agaricales) collected from China were studied using morphological and molecular methods. Two species, C. griseolilacina and C. sinensis were described as new species; both possess branched and pale purple-tinged fruit bodies. However, the former possess a few branched, while the latter is profusely branched. The phylogenetic analysis based on the internal transcribed spacer (ITS) sequences confirmed the distinctions between these two new species and their close relationships with C. rubicundula and C. fumosa in the genus. An evolutionary tendency in genus Clavaria was discussed. Additionally, morphological features of the two new species were described in detail and were illustrated with line drawings and photographs. Holotypes of the new species are deposited in the Mycological Herbarium of Hunan Normal University (MHHNU). The ITS sequences generated in this study were deposited in GenBank. A key is provided for the known Clavaria species in China.
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- 2020
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6. Redescription and epitypification of Clavaria atrofusca Velen.
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KAUTMANOVÁ, IVONA, MATOUŠ, JAN, TOMŠOVSKÝ, MICHAL, and KOUKOL, ONDŘEJ
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CLAVARIA , *CLAVARIACEAE , *PLANT classification - Abstract
Clavaria atrofusca was described by Velenovský in 1939 based on a single small collection from the Czech Republic. The species is rather rare and until 2009 it had further only been recorded from Switzerland and Denmark. Since 2009 it has also been collected in Norway, Sweden and in 2014 in the Czech Republic. Because the type locality at Mnichovice has been destroyed and the type collection is fragmentary, we propose an epitype of Clavaria atrofusca Velen. based on the recent collection from the Czech Republic, along with the notes on its ecology and distribution. [ABSTRACT FROM AUTHOR]
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- 2016
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7. Review of the Genus Cladonota Stål with Keys and Illustrations of Adults (Hemiptera: Membracidae: Membracinae: Hypsoprorini). IV. Subgenus Lobocladisca Stål
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Dawn J. Flynn
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biology ,Vexillifera ,Genus ,Insect Science ,Clavaria ,Zoology ,Subgenus ,biology.organism_classification ,Incertae sedis ,Hemiptera ,Ecology, Evolution, Behavior and Systematics - Abstract
This is the fourth in a series of four papers that treat the 56 species and one incertae sedis in the genus Cladonota Stal. The genus Cladonota contains four subgenera: Falculifera McKamey, Cladonota Stal, Lecythifera Fowler, and Lobocladisca Stal. This paper treats the nine species in the subgenus Lobocladisca, which includes C. bennetti (Kirby), C. biclavata (Westwood), C. clavaria (Fairmaire), C. livida (Buckton), C. lobulata (Stal), C. occidentalis (Strumpel), C. rigida (Stal), C. spatulata (Fairmaire), and C. vexillifera (Goding). Cladonota orientalis (Strumpel) is treated as a new junior synonym of C. biclavata (Westwood). Keys, species illustrations, and diagnoses are given for each species treated.
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- 2020
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8. The clavarias of the United States and Canada ,
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Coker, William Chambers, 1872-1953, MBLWHOI Library, University Library, University of North Carolina at Chapel Hill (archive.org), and Coker, William Chambers, 1872-1953
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Clavaria ,North America ,North Carolina - Published
- 1923
9. Revision of taxonomic concept and systematic position of some Clavariaceae species.
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Kautmanová, Ivona, Adamčík, Slavomír, Lizoň, Pavel, and Jančovičová, Soňa
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CLAVARIACEAE , *CLAVARIA , *SOIL micromorphology , *NUCLEOTIDE sequence , *PHYLOGENY - Abstract
A taxonomic and nomenclatural revision of some representatives of Clavariaceae is presented based on extensive collecting in central and western Europe. Five species originally described from Europe are identified, redescribed and delimited: Clavaria fragilis, Ramariopsis crocea, R. corniculata, R. helvola and R. pulchella. Lectotypes, epitypes or neotypes are designated for all these species. Descriptions are based on macro- and micromorphological characters and supplemented with DNA analyses of the nrLSU regions from 20 specimens. The molecular phylogenetic analyses reconstructed a phylogram showing relationships among the discussed species as well as some closely related taxa. The taxonomic value of the ratio of length and width of spores (Q-value) is discussed. [ABSTRACT FROM AUTHOR]
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- 2012
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10. Oocyte Production, Fecundity, and Size at the Onset of Reproduction of Tripalea clavaria (Cnidaria: Octocorallia: Anthothelidae) in the Southwestern Atlantic.
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Excoffon, Adriana C., Navella, María L., Acuña, Fabián H., and Garese, Agustín
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CLAVARIA ,OVUM ,POLYPS ,FERTILITY ,DISSECTING microscopes ,DEVELOPMENTAL biology ,STATISTICAL correlation ,STATISTICAL sampling - Abstract
The article presents a study which shows the oocyte production, fecundity, and size at the onset reproduction of tripalea clavaria in southwestern Atlantic. The study employs a collecting method, dissecting microscope and Spearman correlation analysis. Result shows that the development of colonies that contain oocytes throughout the sampling period was asynchronous and the oocytes in the various developmental stages were found in each polyp indicates production.
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- 2011
11. Clavariachaetaceae, a family of neotropical Hymenochaetales (Basidiomycota) including clavarioid, pileate and resupinate species.
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Parmasto, Erast
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BASIDIOMYCOTA , *HYMENOCHAETALES , *HYMENOCHAETE , *CLAVARIA , *ENDANGERED species , *HERBARIA - Abstract
Family Clavariachaetaceae (Basidiomycota, Hymenochaetales), two its genera Clavariachaete and Dichochaete, and all four very rare species distributed in South America are described. [ABSTRACT FROM AUTHOR]
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- 2010
12. New Sesquiterpenes from Edible Fungus Clavicorona pyxidata.
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ChunHua Lu, ZhongHui Zheng, XinJian Lin, WenJin Su, and YueMao Shen
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SESQUITERPENES , *FERMENTATION , *CLAVARIA , *NUCLEAR magnetic resonance spectroscopy , *MASS spectrometry , *X-ray diffraction - Abstract
Three new sesquiterpenes, pyxidatol A–C 1–3, resp., were obtained from the fermentation culture of Clavaria pyxidata, together with two known ones, tsugicoline E 4 and omphadiol 5. Their structures were elucidated through spectroscopic analyses, including 1D and 2DNMR experiments, HRESIQTOF mass spectrometry, chemical correlation, and Xray singlecrystal diffraction. [ABSTRACT FROM AUTHOR]
- Published
- 2008
13. Hallucinogenic Mushrooms in Mexico: An Overview.
- Author
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Guzmán, Gastón
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HALLUCINOGENIC mushrooms ,PSILOCYBE ,PANAEOLUS ,TAXONOMY ,ELAPHOMYCES ,CORDYCEPS ,CLAVARIA ,AMANITA - Abstract
Copyright of Economic Botany is the property of Springer Nature and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
- Published
- 2008
14. Does warming by open-top chambers induce change in the root-associated fungal community of the arctic dwarf shrub Cassiope tetragona (Ericaceae)?
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Sunil Mundra, Jelte Rozema, Kelsey Erin Lorberau, Anders Bjørnsgaard Aas, Pernille Bronken Eidesen, Håvard Kauserud, Synnøve Smebye Botnen, and Systems Ecology
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0301 basic medicine ,Climate Change ,OTCs ,Plant Science ,Plant Roots ,Mycena ,Cassiope tetragona ,Ericoid mycorrhiza ,Svalbard ,03 medical and health sciences ,Arctic ,Mycorrhizae ,Clavaria ,Botany ,SDG 13 - Climate Action ,Genetics ,Climate change ,DNA Barcoding, Taxonomic ,DNA, Fungal ,Molecular Biology ,Ecology, Evolution, Behavior and Systematics ,High-throughput sequencing ,Open-top chambers ,biology ,Arctic Regions ,Ecology ,Temperature ,Sebacinales ,General Medicine ,biology.organism_classification ,Ectomycorrhiza ,030104 developmental biology ,Root-associated fungi ,Cortinarius ,Ericaceae - Abstract
Climate change may alter mycorrhizal communities, which impact ecosystem characteristics such as carbon sequestration processes. These impacts occur at a greater magnitude in Arctic ecosystems, where the climate is warming faster than in lower latitudes. Cassiope tetragona (L.) D. Don is an Arctic plant species in the Ericaceae family with a circumpolar range. C. tetragona has been reported to form ericoid mycorrhizal (ErM) as well as ectomycorrhizal (ECM) symbioses. In this study, the fungal taxa present within roots of C. tetragona plants collected from Svalbard were investigated using DNA metabarcoding. In light of ongoing climate change in the Arctic, the effects of artificial warming by open-top chambers (OTCs) on the fungal root community of C. tetragona were evaluated. We detected only a weak effect of warming by OTCs on the root-associated fungal communities that was masked by the spatial variation between sampling sites. The root fungal community of C. tetragona was dominated by fungal groups in the Basidiomycota traditionally classified as either saprotrophic or ECM symbionts, including the orders Sebacinales and Agaricales and the genera Clavaria, Cortinarius, and Mycena. Only a minor proportion of the operational taxonomic units (OTUs) could be annotated as ErM-forming fungi. This indicates that C. tetragona may be forming mycorrhizal symbioses with typically ECM-forming fungi, although no characteristic ECM root tips were observed. Previous studies have indicated that some saprophytic fungi may also be involved in biotrophic associations, but whether the saprotrophic fungi in the roots of C. tetragona are involved in biotrophic associations remains unclear. The need for more experimental and microscopy-based studies to reveal the nature of the fungal associations in C. tetragona roots is emphasized.
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- 2017
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15. Notas micológicas y bacteriológicas. Basidiomycetes y Streptomycetes de Chile
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Waldo Lazo
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biology ,Clavaria ,Tremellodendropsis ,Botany ,General Earth and Planetary Sciences ,Coltricia ,biology.organism_classification ,Battarrea ,General Environmental Science - Abstract
Se comunica la recolección de Clavaria nigricans, Tremellodendrospis pusio, Battarrea stevenii, Coltricia perennis, Streptomyces albus, S. antibioticus, S. cliifornicus, S.coelicolor, S. flavogliseus, S. Fradiae, S. globisporus, S Globossus, S.griseus, S. melanocyclus, S.odorifer, S. olivaceus, S. parvus, S. phaeochromogenes, S. rimosus, S. roseochromogenes. S. violaceus-niger; S.violaceus-ruber, S. viridis.
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- 2019
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16. Clavaria acuta
- Author
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Huafang Su, Huafang Su, Huafang Su, and Huafang Su
- Abstract
Fungi, http://name.umdl.umich.edu/IC-HERB00IC-X-340336%5DMICH-F-340336_1, https://quod.lib.umich.edu/cgi/i/image/api/thumb/herb00ic/340336/MICH-F-340336_1/!250,250, The University of Michigan Library provides access to these materials for educational and research purposes. Some materials may be protected by copyright. If you decide to use any of these materials, you are responsible for making your own legal assessment and securing any necessary permission. If you have questions about the collection, please contact the Herbarium professional staff: herb-dlps-help@umich.edu. If you have concerns about the inclusion of an item in this collection, please contact Library Information Technology: libraryit-info@umich.edu., https://www.lib.umich.edu/about-us/policies/copyright-policy
- Published
- 2019
17. Fairy rings harbor distinct soil fungal communities and high fungal diversity in a montane grassland
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Mercedes Ibañez, M. Teresa Sebastià, Teresa Marí, Antonio Rodríguez, Agustín Lobo, Carles Castaño, Fundación Española para la Ciencia y la Tecnología, and Ministerio de Educación (España)
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0106 biological sciences ,Plant Science ,Eurotiales ,Secondary succession ,010603 evolutionary biology ,01 natural sciences ,Semi-natural grassland ,Keystone species ,Clavaria ,Psathyrella ,Pleosporales ,Agaricales ,Community ecology ,Ecology, Evolution, Behavior and Systematics ,Saprotrophy ,Ecology ,biology ,Community ,Ecological Modeling ,Tricholoma ,biology.organism_classification ,Lycoperdon ,Internal transcribed spacer ,Next-generation sequencing ,Metabarcoding ,010606 plant biology & botany - Abstract
Increasing numbers of fungal species have been described recently from semi-natural grassland soils, raising the conservation interest of these species-rich habitats. Here, we characterize the soil fungal community inhabiting six fairy rings in a montane grassland of the Eastern Pre-Pyrenees through fungal DNA metabarcoding of ITS2 amplicons. Distinct soil fungal communities were observed outside of the rings compared to inside the ring areas. Higher abundances of fungi belonging to Pleosporales and Eurotiales were observed outside fairy rings, whereas zones belonging to the fairy rings showed higher abundances of Agaricales. Fungal diversity was higher inside the rings than outside. We found diverse saprotrophic or putative saprotrophic taxa associated with the studied rings, including the genera Clavaria, Psathyrella, Tricholoma, Amanita and Lycoperdon. These findings highlight the importance of particular keystone taxa in the structuring of fungal communities and their effect on the overall grassland fungal community., This study was developed within the projects BIOGEI (CGL 2013-49142-C2-1-R) and CAPAS (CGL 2010-22378-C03-01) funded by the Spanish Science Foundation (FECYT) jointly with the FPU programme (FPU12/05849) run by the Spanish Ministry of Education. Funding from the project IMAGINE (CGL 2017-85490-R) allowed the completion of this work.
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- 2020
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18. NEW DATA ON APHYLLOPHOROID FUNGI (BASIDIOMYCOTA) IN THE SURROUNDINGS OF KEM’ TOWN (REPUBLIC OF KARELIA)
- Author
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Anton Shiryaev and Anna Ruokolainen
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Ramariopsis ,biology ,Ecology ,Lentaria ,Biogeography ,biology.organism_classification ,Geography ,Clavaria ,General Earth and Planetary Sciences ,IUCN Red List ,Species richness ,Clavarioid fungi ,Tomentella ,General Environmental Science - Abstract
Data on the diversity of aphyllophoroid fungi in the surroundings of the Kem’ Town and Kemsky District of the Republic of Karelia are presented. As of now, 75 species are known from Kem’ Town surroundings and 185 species from the Kemsky District. Antrodia hyalina Spirin, Miettinen et Kotir., Tomentella cinereoumbrina (Bres.) Stalpers, Tyromyces kmetii (Bres.) Bondartsev et Singer and two arcto-alpine species (Clavaria sphagnicola Boud., Ramariopsis subarctica Pilat) are noted for the Republic of Karelia for the first time. 74 species are new for the Kemsky District and 71 species are new for the biogeographic province Karelia keretina (Kk). The current total record for the Kemsky District is 185 species of aphyllophoroid fungi. New sites were discovered for four species from the Red Data Book of the Republic of Karelia (Antrodia mellita Niemela et Pentilla, Clavariadelphus pistillaris (L.) Donk, Lentaria afflata (Lagger) Corner, Tomentella crinalis (Fr.) M. J. Larsen). Additionally, Ramaria flavobrunnescens (G. F. Atk.) Corner can be considered as a candidate for the new edition of the regional Red Data Book. Seven indicatorspecies for virgin forests and 15 for old-growth forests of eastern Fennoscandia were identified. The degree of knowledge on aphyllophoroid fungi biomorphs in this territory in comparison with other well-studied territories of the Republic was assessed. The distribution map for the species richness of clavarioid fungi in Eastern Fennoscandia (from the Arctic coast of the Barents Sea to the Gulf of Finland and Lake Ladoga) is provided. The north-to-south change in the species richness of clavarioid fungi, from tundra to south-taiga forests of Eastern Fennoscandia, is discussed. The current total record for the Kemsky District is 185 species of aphyllophoroid fungi.
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- 2020
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19. RECIPROCAL TRANSFER OF NUTRIENTS BETWEEN ERICACEOUS PLANTS AND A CLAVARIA SP.
- Author
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Englander, L. and Hull, R. J.
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PLANTS , *RHODODENDRONS , *CLAVARIA , *PHOTOSYNTHATES , *RADIOISOTOPES , *LEAVES - Abstract
A close physiological relationship between some ericaceous plants, Rhododendron sp. and Pieris japonica, and a member of the genus Clavaria is indicated by radioisotope translocation studies. [14C]photosynthate from host leaves was detected in Clavaria fruiting bodies and 33P applied to Clavaria fruiting bodies was detected in plant roots. Possible transfer mechanisms, including that of a mycorrhizal association, are discussed. [ABSTRACT FROM AUTHOR]
- Published
- 1980
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20. Diversity and characteristics of colonization of root-associated fungi of Vaccinium uliginosum
- Author
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Changli Liu, Lili Li, Long Bai, Xingyu Zhao, Min Zhao, and Hongyi Yang
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0301 basic medicine ,Hypha ,Blueberry Plants ,Vaccinium uliginosum ,lcsh:Medicine ,Plant Roots ,Article ,03 medical and health sciences ,Mycorrhizae ,Clavaria ,Botany ,Endophytes ,Lachnum ,Pleosporales ,Internal transcribed spacer ,lcsh:Science ,DNA, Fungal ,Author Correction ,Phylogeny ,Multidisciplinary ,biology ,lcsh:R ,Fungi ,High-Throughput Nucleotide Sequencing ,Biodiversity ,Sordariomycetes ,biology.organism_classification ,Phenotype ,030104 developmental biology ,Oidiodendron ,lcsh:Q - Abstract
This study investigated ericoid mycorrhizal fungi (EMF) diversity in Vaccinium uliginosum across its main wild distribution range in China. Fungal communities in hair roots of V. uliginosum were analyzed using Illumina MiSeq sequencing. Only 22 OTUs were assigned to putative EMF genera. Rhizoscyphus and Meliniomyces dominated EMF communities, followed by Clavaria, Oidiodendron, Lachnum, Acephala, and Phialocephala. There were more dark septate endophytes (DSE) reads from the Greater Khingan Mountains than from other study areas, similar to the results of the percent colonization of DSE by the magnified intersections method. Overall, high-throughput sequencing data provided a rough community-scale sketch of root-associated fungi of V. uliginosum. Two hundred and eighty slow-growing isolates were isolated from root pieces of V. uliginosum, and the isolates matched 16 fungal genera on the basis of morphological and internal transcribed spacer sequence comparison. The isolates of Cryptosporiopsis ericae, Oidiodendron maius, Lachnum sp., Sordariomycetes sp., and Pleosporales sp., formed ericoid hyphal coils via resynthesis trails. The co-existence between EMF and DSE in hair roots was observed via trypan blue staining. A putative model for the co-existence between EMF and DSE in the hair roots of V. uliginosum was proposed. We suggest that under certain environmental stresses, such as low temperature and poor available nutrients, ericoid plants may favor co-colonization by both DSE and EMF.
- Published
- 2018
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21. Some Clavarias from Argentina.
- Author
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Corner, E. J. H.
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CLAVARIACEAE , *BASIDIOMYCETES , *CLAVARIA , *CLAVULINOPSIS - Abstract
Presents information on several species of Clavariaceae from Argentina. Clavaria minima; Clavaria vermicularis; Clavicorona turgida; Clavulinopsis corniculata.
- Published
- 1957
22. Circumscription and phylogeny of the Lepidostromatales (Lichenized Basidiomycota) following discovery of new species from China and Africa
- Author
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André De Kesel, Xin Yu Wang, Bernard Goffinet, Damien Ertz, Dong Liu, Haixia Shi, Meixia Yang, Yan Yun Zhang, Li-Song Wang, and Jae-Seoun Hur
- Subjects
0301 basic medicine ,China ,Physiology ,Lineage (evolution) ,DNA, Ribosomal ,Multiclavula ,03 medical and health sciences ,Cantharellales ,Genus ,DNA, Ribosomal Spacer ,RNA, Ribosomal, 28S ,Clavaria ,RNA, Ribosomal, 18S ,Genetics ,Cluster Analysis ,Internal transcribed spacer ,DNA, Fungal ,Molecular Biology ,Ribosomal DNA ,Phylogeny ,Ecology, Evolution, Behavior and Systematics ,biology ,Phylogenetic tree ,Basidiomycota ,Sequence Analysis, DNA ,Cell Biology ,General Medicine ,030108 mycology & parasitology ,biology.organism_classification ,RNA, Ribosomal, 5.8S ,Evolutionary biology - Abstract
Based on an exhaustive sampling of all known Lepidostromatales, a lineage of clavarioid lichen-forming basidiomycetes, we assess (i) the phylogenetic affinities of the six Chinese species currently accommodated in Multiclavula (Cantharellales) based on inferences from the 18S and 28S subunits of the nuclear ribosomal DNA repeat and (ii) the phylogenetic structure among Chinese populations of Lepidostromatales, based on the nuc rDNA ITS1-5.8S-ITS2 (internal transcribed spacer [ITS]) regions. Multiclavula fossicola and M. sinensis belong to the Lepidostromatales and are transferred to Sulzbacheromyces. Chinese reports of M. clara and M. vernalis belong to species of Lepidostromatales, and specimens identified as M. mucida belong to the nonlichenized genus Clavaria. Hence, evidence of Multiclavula occurring in China is lacking. Similarly, L. calocerum is excluded from the Chinese flora. The recently described L. asianum should be regarded as conspecific with S. sinensis. Three new species of Sulzbacheromyces are described: S. bicolor and S. yunnanensis from China and S. miomboensis from the Democratic Republic of Congo. Consequently, Sulzbacheromyces is new to Asia and Africa. A worldwide key to the species of Lepidostromatales is provided.
- Published
- 2018
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23. Taxonomy and phylogeny of yellow Clavaria species with clamped basidia—Clavaria flavostellifera sp. nov. and the typification of C. argillacea, C. flavipes and C. sphagnicola
- Author
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Ibai, Olariaga, Isabel, Salcedo, Pablo P, Daniëls, Brian, Spooner, M, Dueñas, M P, Martin, and Ivona, Kautmanová
- Subjects
0106 biological sciences ,0301 basic medicine ,Paraphyly ,Physiology ,Molecular Sequence Data ,Clavicorona ,010603 evolutionary biology ,01 natural sciences ,03 medical and health sciences ,DNA, Ribosomal Spacer ,Botany ,Clavaria ,Genetics ,Camarophyllopsis ,Internal transcribed spacer ,Hymenium ,DNA, Fungal ,Molecular Biology ,Phylogeny ,Ecology, Evolution, Behavior and Systematics ,biology ,Cell Biology ,General Medicine ,Spores, Fungal ,030108 mycology & parasitology ,biology.organism_classification ,Basidium ,Taxonomy (biology) ,Agaricales - Abstract
This study explores species limits of a group of Clavaria species with taxonomic and nomenclatural problems and discusses the phylogeny and circumscription of the genus. The nuc 28S rDNA (28S) and internal transcribed spacer region phylog- enies resolve species relationships, and the ITS is shown to be an adequate barcode marker for Clavaria. Yellow, clamped species of Clavaria are distributed in two clades, (i) C. flavostellifera, sister to C. incarnata and C. asterospora in ITS analyses, characterized by producing ornamented spores, and (ii) C. argillacea-C. citrinorubra-C. flavipes-C. sphagni- cola, with smooth spores. Clavaria flavostellifera is described as new species based on morphological and molecular characters. Molecular evidence that sup- ports C. sphagnicola as distinct from C. argillacea is provided. The usefulness of spore ornamentation as a taxonomic character is discussed; it is present only in some taxa and then only on spores trapped in the hymenium. Descriptions of C. argillacea, C. flavipes and C. sphagnicola are provided, along with color photographs and a key to yellow species of Clavaria with clamped basidia. Camarophyllopsis and Clavicor- ona are recovered within a paraphyletic Clavaria in our 28S phylogeny. Clampless contextual hyphae and narrow, slightly thick-walled mycelial hyphae are proposed as synapomorphies of Camarophyllopsis and Clavaria.
- Published
- 2015
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24. Chemical and Bioactive Profiling, and Biological Activities of Coral Fungi from Northwestern Himalayas
- Author
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Sapan Kumar Sharma and Nandini Gautam
- Subjects
0106 biological sciences ,Antioxidant ,Coral ,medicine.medical_treatment ,Clavariaceae ,01 natural sciences ,Article ,Antioxidants ,0404 agricultural biotechnology ,Nutraceutical ,010608 biotechnology ,Clavaria ,Dietary Carbohydrates ,medicine ,Food science ,Carotenoid ,chemistry.chemical_classification ,Minerals ,Mushroom ,Multidisciplinary ,Bacteria ,biology ,Ecology ,fungi ,food and beverages ,Ramaria ,04 agricultural and veterinary sciences ,biology.organism_classification ,040401 food science ,Anti-Bacterial Agents ,chemistry ,Dietary Supplements ,Agaricales ,Food Analysis - Abstract
Ramaria Fr. and Clavaria L. are the two major genera of coral mushrooms within families Gomphaceae and Clavariaceae, respectively. Besides having important role in forest ecology, some species of these are reported to possess high nutraceutical and bioactive potential. There is a hidden diversity of coral mushrooms in Northwestern Himalayas. Present studies describe the detailed biochemical profiling and antioxidant, and antibacterial activities of twelve coral mushroom species. Biochemical profiling of nutrients and nutraceuticals was done with standard techniques and by using HPLC, UPLC and GC. Experiments were also conducted to check the toxic metals detection. Antioxidant activities were calculated using EC50 values from mushroom extracts. Antibacterial activities were checked on six pathogenic bacterial strains through minimum inhibition concenterations. Although, differences were observed in the net values of individual species but all the species were found to be rich in protein, macro and micro minerals, carbohydrates, unsaturated fatty acids, essential amino acids, phenolics, tocopherols, anthocynadins and carotenoids. All the species showed significant antioxidant and antibacterial activities. These species are reported to free from heavy toxic metals. Present studies will open the way for their large scale commercial exploitations and use in pharmaceutical industries as antioxidant, antibacterial and nutraceutical constituents.
- Published
- 2017
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25. Noteworthy records of aphyllophoroid fungi in Finland (Basidiomycota)
- Author
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Panu Kunttu, Jorma Pennanen, Tapio Kekki, Matti Kulju, and Mai Suominen
- Subjects
Trechispora ,biology ,Rare species ,Basidiomycota ,Plant Science ,corticioid ,biology.organism_classification ,Clavaria rosea ,lcsh:Biology (General) ,Polypore ,Gloeophyllum ,Botany ,Clavaria ,polypore ,distribution ,Postia ,boreal forest ,lcsh:QH301-705.5 ,Ecology, Evolution, Behavior and Systematics ,biogeography ,rare species - Abstract
We present new records of noteworthy aphyllophoroid fungi, mainly polypores and corticioids in Finland. The following 19 rare or infrequently collected species are presented with notes on their substrates: Amylocorticium subsulphureum, Antrodiella parasitica, Ceraceomyces sulphurinus, Clavaria atroumbrina, Clavaria rosea, Gloeophyllum carbonarium, Hyphodontia flavipora, Junghuhnia fimbriatella, Lindtneria chordulata, Odonticium septocystidia, Peniophorella guttulifera, Perenniporia tenuis, Postia immitis, Repetobasidium vile, Resinicium pinicola, Sidera vulgaris, Tomentella coerulea, Trechispora laevis and Xylodon pruni. We also list 41 aphyllophoroid fungi as new to some sections of the boreal vegetation zone in Finland.
- Published
- 2014
26. The application of the name Xylaria hypoxylon, based on Clavaria hypoxylon of Linnaeus*
- Author
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Marc Stadler, Jacques Fournier, and David L. Hawksworth
- Subjects
J. J. Dillenius ,J. Ray ,Sanctioned names ,biology ,Xylariales ,Hypoxylon ,E. M. Fries ,biology.organism_classification ,Agricultural and Biological Sciences (miscellaneous) ,Genealogy ,Article ,Xylaria hypoxylon ,Geography ,Ascomycota ,G. D. Ehret ,Basionym ,Clavaria ,Typification ,Ecology, Evolution, Behavior and Systematics - Abstract
Although Xylaria hypoxylon is one of the most familiar fungi of temperate regions, the basionym of the name, Clavaria hypoxylon of Linnaeus, has remained untypified. Here we assess the original five elements included in the 1753 protologue; no candidate specimen was located but two illustrations Linnaeus cited were considered, one a mixture of species and the other fanciful. As the name is sanctioned, following clarifications in the Melbourne Code, elements cited by Fries when the name was sanctioned in 1823 are also candidates for lectotypification. In addition to various illustrations, Fries cites two exsiccatae, and one from his own Scleromycetes Suecicae distributed in 1821 is designated as lectotype for Linnaeus' name here. In view of the complexity of the group as revealed by molecular systematic work, and the poor state of the Fries material, we also designate a sequenced epitype from Sweden. We stress the importance of examining fungi in the complex in the sexual state, as those that are asexual can be difficult to identify conclusively. Figures of the original protologues and the most pertinent illustrations and specimens are provided, along with a detailed description and illustrations based on recent collections.
- Published
- 2014
27. A systematic, morphological and ecological overview of the Clavariaceae (Agaricales)
- Author
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Jordan R. Mayor, P. Brandon Matheny, Joshua M. Birkebak, and K. Martin Ryberg
- Subjects
0106 biological sciences ,0301 basic medicine ,Physiology ,Zoology ,Clavariaceae ,Clavicorona ,010603 evolutionary biology ,01 natural sciences ,03 medical and health sciences ,Clavaria ,Genetics ,Camarophyllopsis ,Molecular Biology ,Phylogeny ,Ecology, Evolution, Behavior and Systematics ,Clavulinopsis ,Ramariopsis ,Ecology ,biology ,Phylogenetic tree ,Cell Biology ,General Medicine ,030108 mycology & parasitology ,biology.organism_classification ,Molecular phylogenetics ,Agaricales - Abstract
The Clavariaceae is a diverse family of mushroom-forming fungi composed of species that produce simple clubs, coralloid, lamellate-stipitate, hydnoid and resupinate sporocarps. Here we present a systematic and ecological overview of the Clavariaceae based on phylogenetic analysis of sequences of the nuclear large subunit ribosomal RNA (nLSU), including nine from type collections. Forty-seven sequences from sporocarps of diverse taxa across the Clavariaceae were merged with 243 environmental sequences from GenBank and analyzed phylogenetically to determine major clades within the family. Four major clades or lineages were recovered: (i) Mucronella, (ii) Ramariopsis-Clavulinopsis, (iii) Hyphodontiella and (iv) Clavaria-Camarophyllopsis-Clavicorona. Clavaria is paraphyletic, within which the lamellate and pileate-stipitate genus Camarophyllopsis is derived and composed of two independent lineages. The monotypic genus Clavicorona also appears nested within Clavaria. The monophyly of Clavaria and Camarophyllopsis, however, cannot be statistically rejected. We compared differing classification schemes for the genera Ramariopsis and Clavulinopsis, most of which are inconsistent with the molecular phylogeny and are statistically rejected. Scytinopogon, a genus classified in the Clavariaceae by several authors, shares phylogenetic affinities with the Trechisporales. Overall 126 molecular operational taxonomic units can be recognized in the Clavariaceae, roughly half of which are known only from environmental sequences, an estimate that exceeds the known number of species in the family. Stable isotope ratios of carbon and nitrogen were measured from specimens representing most major phylogenetic lineages to predict trophic strategies. These results suggest that most non-lignicolous species feature a biotrophic mode of nutrition. Ancestral state reconstruction analysis highlights the taxonomic significance of at least nine morphological traits at various depths in the family tree.
- Published
- 2013
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28. European species of Clavaria (Agaricales, Agaricomycetes) with dark basidiomata – a morphological and molecular study
- Author
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Margarita Dueñas, Michal Tomšovský, María P. Martín, and Ivona Kautmanová
- Subjects
biology ,Synonym (taxonomy) ,Genus ,Polyphyly ,Botany ,Clavaria ,Zoology ,Agaricales ,Subgenus ,biology.organism_classification ,Basidium ,Ecology, Evolution, Behavior and Systematics ,Agaricomycetes - Abstract
Clavaria species with dark basidiomata occurring in Europe were analysed using morphological and molecular methods. Morphological analyses revealed four groups containing seven Clavaria species with dark basidiomata. Phylogenetic analysis of the LSU nrDNA region confirmed the separate positions of all seven Clavaria species within the genus. All sequences were grouped in four well-supported clades, mostly corresponding to defined morphological species. The results of the molecular study are inconsistent with the infrageneric classification of Clavaria based on the presence or absence of clamps on the bases of basidia and two widely accepted subgenera. Clavaria and Holocoryne appear to be polyphyletic. A new approach in species delimitation is presented: 1) C. asperulispora and C. atrofusca are two distinct species recognized by the shape of their spores, and the name C. neo-nigrita is a possible synonym of C. asperulispora; 2) species with clustered fragile basidiomata, C. fumosa and Clavaria cf. fuscoferruginea, which are almost identical in shape and size of spores differing only in the darker basidiomata of the latter, are phylogenetically unrelated; 3) Clavaria atrobadia is a dubious species, the name being most likely a synonym of C. fuscoferruginea; 4) two species with close morphological and phylogenetic affinity, C. atroumbrina and C. pullei, are distinguished based on the more oblong and narrower spores of the former. Comparison of European and North American material suggests the transatlantic nature of the distribution of C. asperulispora, C. atroumbrina and C. fumosa.
- Published
- 2012
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29. Neotypes forPorites porites(Pallas, 1766) andPorites divaricataLe Sueur, 1820 and remarks on other western Atlantic species ofPorites(Anthozoa: Scleractinia)
- Author
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Stephen C. Jameson and Stephen D. Cairns
- Subjects
biology ,Ecology ,Anthozoa ,Clavaria ,Porites ,Porites porites ,Holotype ,Zoology ,Scleractinia ,Taxonomy (biology) ,General Agricultural and Biological Sciences ,biology.organism_classification ,Porites divaricata - Abstract
To stabilize the taxonomy of the genus Porites in the western Atlantic and provide a foundation from which to launch future taxonomic research, neotypes for the coral species Porites porites and P. divaricata are chosen and Porites verrillii is proposed as a junior synonym of P. astreoides. Colony photographs and stereo scanning electron micrographs are provided of corallites of: 1) neotypes of P. porites (i.e., the P. clavaria holotype) and P. divaricata, 2) the holotypes of P. furcata, P. branneri, P. colonensis, and P. verrillii, and 3) a common P. astreoides. A brief taxonomic history of the genus is also provided.
- Published
- 2012
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30. Revision of taxonomic concept and systematic position of some Clavariaceae species
- Author
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Pavel Lizoň, Soňa Jančovičová, Slavomír Adamčík, and Ivona Kautmanová
- Subjects
0106 biological sciences ,0301 basic medicine ,Physiology ,Molecular Sequence Data ,Zoology ,Clavariaceae ,DNA, Ribosomal ,010603 evolutionary biology ,01 natural sciences ,03 medical and health sciences ,RNA, Ribosomal, 28S ,Botany ,Clavaria ,Genetics ,DNA Barcoding, Taxonomic ,DNA, Fungal ,Molecular Biology ,Phylogeny ,Ecology, Evolution, Behavior and Systematics ,Ramariopsis crocea ,Ramariopsis ,Base Sequence ,Phylogenetic tree ,biology ,RNA, Fungal ,Sequence Analysis, DNA ,Cell Biology ,General Medicine ,Spores, Fungal ,030108 mycology & parasitology ,biology.organism_classification ,Europe ,Clavaria fragilis ,Pulchella ,Taxon ,Agaricales - Abstract
A taxonomic and nomenclatural revision of some representatives of Clavariaceae is presented based on extensive collecting in central and western Europe. Five species originally described from Europe are identified, redescribed and delimited: Clavaria fragilis, Ramariopsis crocea, R. corniculata, R. helvola and R. pulchella. Lectotypes, epitypes or neotypes are designated for all these species. Descriptions are based on macro- and micromorphological characters and supplemented with DNA analyses of the nrLSU regions from 20 specimens. The molecular phylogenetic analyses reconstructed a phylogram showing relation- ships among the discussed species as well as some closely related taxa. The taxonomic value of the ratio of length and width of spores (Q-value) is discussed.
- Published
- 2012
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31. Alexander von Humboldt’s fungal collections at Kew
- Author
-
Peter Roberts
- Subjects
biology ,Calocera viscosa ,Zoology ,Physisporinus vitreus ,Boletus ,Plant Science ,biology.organism_classification ,Type (biology) ,Herbarium ,Synonym (taxonomy) ,South american ,Botany ,Clavaria ,Ecology, Evolution, Behavior and Systematics - Abstract
Collections of three fungal species described from Germany by Alexander von Humboldt have been rediscovered in the mycological herbarium at Kew. These collections are considered lectotypes of Boletus patella, B. venosus, and Clavaria aurea and are assigned to Postia stiptica, Physisporinus vitreus, and Calocera viscosa respectively. Humboldt’s Central & South American collections are also at Kew and a list of specimens is appended. Based on the rediscovered type collection, Favolus humboldtii is considered a synonym of Polyporus tenuiculus.
- Published
- 2011
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32. Predation by the nudibranch Tritonia odhneri (Opisthobranchia: Tritoniidae) on octocorals from the South Atlantic Ocean
- Author
-
Claudia Muniain and Stella García-Matucheski
- Subjects
Tritonia (gastropod) ,biology ,Ecology ,Tritonia odhneri ,Opisthobranchia ,Zoology ,Nudibranch ,Aquatic Science ,Oceanography ,biology.organism_classification ,Predation ,Genus ,Tritoniidae ,Clavaria ,Ecology, Evolution, Behavior and Systematics - Abstract
The diet of the nudibranch mollusc Tritonia odhneri was investigated for the first time based on a detailed anatomical analysis of the gut content of 52 specimens. Digestive tracts of specimens were analysed under stereoscopic microscope equipped with digital camera. Portions of octocorals containing the calcareous sclerites were removed from the tracts and prepared for scanning electron microscopy (SEM). Sclerite morphology and size were determined at the species and genus level on the basis of a taxonomical revision and compared with fresh octocoral specimens collected from Patagonia (San Jorge Gulf) and with voucher specimens from the collections of Museo Argentino de Ciencias Naturales (MACN-in). Specific predation of T. odhneri on octocoral species present in the southwestern Atlantic Ocean was detected. The nudibranch feeds on the gorgonians Primnoella divaricata, Primnoella scotiae (=P. compressa) and Tripalea clavaria, and the pennatulaceans Renilla octodentata and Stylatula sp. A world checklist of dietary interactions between species of the genus Tritonia and octocorals is presented and discussed.
- Published
- 2010
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33. Molecular and morphological evidence for the delimitation ofXylaria hypoxylon
- Author
-
Martina Melcher, Derek Peršoh, Katrin Graf, Marc Stadler, Gerhard Rambold, and Jacques Fournier
- Subjects
0106 biological sciences ,0301 basic medicine ,Species complex ,Physiology ,Xylaria ,Biology ,010603 evolutionary biology ,01 natural sciences ,Xylaria hypoxylon ,03 medical and health sciences ,Ascomycota ,DNA, Ribosomal Spacer ,Clavaria ,Botany ,Genetics ,Xylariales ,Xylariaceae ,Molecular Biology ,Phylogeny ,Ecology, Evolution, Behavior and Systematics ,Hypoxylon ,Sequence Analysis, DNA ,Cell Biology ,General Medicine ,Sordariomycetes ,030108 mycology & parasitology ,biology.organism_classification - Abstract
Xylaria hypoxylon, the type species of Xylaria (Xylariaceae, Sordariomycetes), was first described by Linnaeus as Clavaria hypoxylon from Sweden. Saccardo and other mycologists assumed a cosmopolitan distribution for this species. However, contradictory reports in the literature on its morphoanatomical characters and strongly inconsistent rDNA sequence data attributed to this species in GenBank suggested the existence of an unresolved species complex. To address this lack of clarity, molecular and morphological characters of numerous specimens and corresponding cultures of X. hypoxylon and related taxa from Europe were studied. Newly obtained 5.8S/ITS nrDNA sequence data were compared with published data and sequences of reference strains. European populations of X. hypoxylon from various hosts exhibited consistent rDNA sequence data and a relatively uniform holomorphic morphology, except for one specimen from Sweden that deviated in its ascospore morphology. Some samples from western United States showed DNA sequence data being identical to those of specimens from Europe, confirming a North American occurrence of X. hypoxylon. DNA sequences and morphology of other extra-European material however showed substantial deviations. Definitely not conspecific with the European material examined in this study is a strain, assigned to X. hypoxylon, the DNA sequence data of which have been used in various phylogenetic studies as a representative of Xylariaceae and Xylariales respectively. This material probably represents X longiana.
- Published
- 2009
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34. New Sesquiterpenes from Edible FungusClavicorona pyxidata
- Author
-
Wenjin Su, Lin Xinjian, Yuemao Shen, Yongbiao Zheng, Zhong-Hui Zheng, and Chunhua Lu
- Subjects
biology ,Chemistry ,Stereochemistry ,Organic Chemistry ,Edible fungus ,Mass spectrometry ,biology.organism_classification ,Biochemistry ,Catalysis ,Chemical correlation ,Inorganic Chemistry ,Drug Discovery ,Clavaria ,Organic chemistry ,Fermentation ,Physical and Theoretical Chemistry ,Clavicorona pyxidata - Abstract
Three new sesquiterpenes, pyxidatol A–C (1–3, resp.), were obtained from the fermentation culture of Clavaria pyxidata, together with two known ones, tsugicoline E (4) and omphadiol (5). Their structures were elucidated through spectroscopic analyses, including 1D- and 2D-NMR experiments, HR-ESI-Q-TOF mass spectrometry, chemical correlation, and X-ray single-crystal diffraction.
- Published
- 2008
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35. Hallucinogenic Mushrooms in Mexico: An Overview
- Author
-
Gastón Guzmán
- Subjects
Amanita ,Mushroom ,Psilocybe ,biology ,Panaeolus ,Ethnomycology ,Plant Science ,Horticulture ,biology.organism_classification ,Geography ,Conocybe ,Clavaria ,Psathyrella ,Ethnology - Abstract
Hallucinogenic Mushrooms in Mexico: An Overview.Psilocybe, with 53 known hallucinogenic species in Mexico, is the most important and diverse group of sacred mushrooms used by Mexican indigenous cultures. Psilocybe caerulescens, known by the present-day Nahuatl Indians as teotlaquilnanacatl, is hypothesized to be the ceremonially-used teonanacatl mushroom cited by Sahagun in the 16th century, the true identity of which has remained obscure for centuries. Correcting a widely disseminated error derived from early published information on Mexican hallucinogenic mushrooms, emphasis is placed on the fact that Panaeolus species have never been used traditionally in Mexico. Reports of the use of species of Amanita, Clavaria, Conocybe, Cordyceps, Dictyophora, Elaphomyces, Gomphus, Lycoperdon, Psathyrella, and Stropharia as sacred or narcotic mushrooms are discussed. A brief history of the discovery of hallucinogenic mushrooms in Mexico is presented, as well as notes on their taxonomy, distribution, and traditional use in Mexico.
- Published
- 2008
- Full Text
- View/download PDF
36. Yellow Clavaria species in the British Isles
- Author
-
Peter Roberts
- Subjects
Geography ,Ecology ,biology ,Botany ,Clavaria ,Key (lock) ,Clavaria amoenoides ,Plant Science ,biology.organism_classification ,Clavulinopsis - Abstract
At the 2005 grassland fungi workshop in Wales, Debbie Evans brought along a specimen of a yellow clavarioid fungus which she had identified as Clavaria amoenoides Corner et al., a species not previously known to be British but listed in Nordic Macromycetes (Hansen & Knudsen, 1997) as occurring in Scandinavia. An additional collection was made during the workshop itself and further specimens were collected at the 2006 upland foray in Wales, in a pasture next to the foray centre. It seems we now have three yellow or yellowish Clavaria species in the British Isles, all of them unbranched (tubular or clubshaped) and distinctly pale or dull compared with the much commoner and brighter yellow Clavulinopsis species. As with the black and brown Clavaria species (Roberts, 2007), the literature on these species is scattered, so a brief key and descriptions follow. ‘Q’ is spore length divided by breadth.
- Published
- 2008
- Full Text
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37. Black & brown Clavaria species
- Author
-
Peter Roberts
- Subjects
Ecology ,biology ,Botany ,Clavaria ,Plant Science ,biology.organism_classification - Published
- 2007
- Full Text
- View/download PDF
38. Multilocus phylogenetic reconstruction of the Clavariaceae (Agaricales) reveals polyphyly of agaricoid members
- Author
-
Joshua M. Birkebak, P. Brandon Matheny, Brian P. Looney, and Slavomír Adamčík
- Subjects
0301 basic medicine ,Physiology ,Zoology ,Clavariaceae ,DNA, Ribosomal ,Agaricomycetes ,Clavaria fumosa ,03 medical and health sciences ,Polyphyly ,parasitic diseases ,Clavaria ,DNA, Ribosomal Spacer ,RNA, Ribosomal, 28S ,Genetics ,Camarophyllopsis ,Cluster Analysis ,Clade ,DNA, Fungal ,Molecular Biology ,Ecology, Evolution, Behavior and Systematics ,Phylogeny ,biology ,Cell Biology ,General Medicine ,Sequence Analysis, DNA ,030108 mycology & parasitology ,biology.organism_classification ,RNA, Ribosomal, 5.8S ,Pileipellis ,RNA Polymerase II ,Agaricales - Abstract
The genus Camarophyllopsis contains species with lamellate (agaricoid) basidiomes in the family Clavariaceae (Agaricales), a group otherwise dominated by club-like (clavarioid) or branched (coralloid) forms. Previous studies have suggested that species classified in Camarophyllopsis occur in two independent lineages. We reconstructed a multilocus phylogeny of the Clavaria-Camarophyllopsis-Clavicorona clade in the Clavariaceae using RNA polymerase II second largest subunit (rpb2), nuclear ribosomal 28S, and nuclear ribosomal ITS1-5.8S-ITS2 regions data and detected three independent groups of agaricoid fungi, including the genera Camarophyllopsis, Hodophilus, and Lamelloclavaria gen. nov, which distinctly differ in their pileipellis structure. In all, nine major lineages within the Clavaria-Camarophyllopsis-Clavicorona clade were recovered: Clavaria sensu stricto, Camarophyllopsis sensu stricto, Hodophilus, the Clavaria pullei clade, the Clavaria fumosa clade, Lamelloclavaria gen. nov., the Clavaria atrofusca clade, Holocoryne (= Clavaria sect. Holocoryne), and Clavicorona Clavaria is paraphyletic and represented by five clades. Additional gene sampling is necessary to determine and confirm relatedness of these lineages before splitting Clavaria into additional genera.
- Published
- 2015
39. A brief chronicle of the genus cordyceps fr., the oldest valid genus in cordycipitaceae (hypocreales, ascomycota)
- Author
-
Gi-Ho Sung, Jae-Gu Han, Sang-Kuk Han, Bhushan Shrestha, Junsang Oh, Kang-Hyo Lee, and Eiji Tanaka
- Subjects
0106 biological sciences ,0301 basic medicine ,Hypocreales ,Zoology ,Ophiocordyceps ,Fungal taxonomy ,010603 evolutionary biology ,01 natural sciences ,Microbiology ,03 medical and health sciences ,Genus ,Clavaria ,Botany ,Clade ,Metacordyceps ,Cordyceps ,biology ,Ascomycota ,Elaphocordyceps ,One Fungus = One Name ,030108 mycology & parasitology ,Mini-Review ,biology.organism_classification ,Infectious Diseases ,Cordycipitaceae - Abstract
The earliest pre-Linnaean fungal genera are briefly discussed here with special emphasis on the nomenclatural connection with the genus Cordyceps Fr. Since its valid publication under the basidiomycetous genus Clavaria Vaill. ex L. (Clavaria militaris L. Sp. Pl. 2:1182, 1753), the genus Cordyceps has undergone nomenclatural changes in the post-Linnaean era, but has stood firmly for approximately 200 years. Synonyms of Cordyceps were collected from different literature sources and analyzed based on the species they represent. True synonyms of Cordyceps Fr. were defined as genera that represented species of Cordyceps Fr. emend. G. H. Sung, J. M. Sung, Hywel-Jones & Spatafora. The most common synonyms of Cordyceps observed were Clavaria and Sphaeria Hall, reported in the 18th and in the first half of the 19th century, respectively. Cordyceps, the oldest genus in the Cordyceps s. s. clade of Cordycipitaceae, is the most preferred name under the "One Fungus = One Name" principle on priority bases.
- Published
- 2014
40. Les finances del Clavari. Abast, límits i funcionament (Cervera, 1442)
- Author
-
Pere Verdés i Pijuan
- Subjects
History ,Account Books ,biology ,Clavaria ,Middle Ages ,biology.organism_classification ,Humanities - Abstract
The clavari was the principal financial manager of the town councils of the Late Middle Ages, and his account books should constitute the foundations of any study of local finances for that period. Such studies of municipalities of Catalonia and the rest of the Crown of Aragon have indeed taken such an approach. The present article aims to draw readers'attention to the possibilities of the Llibres de Clavaria in order to reconstruct the council finances, and to show this, it is studied the Llibre de clavaria of the town of Cervera, dated in 1442. An analysis of this book is followed by a comparative examination of other towns and, finally, a detailed study of the institution of the clavaria itself.
- Published
- 1999
- Full Text
- View/download PDF
41. Phylogenetic relationships of cantharelloid and clavarioid Homobasidiomycetes based on mitochondrial and nuclear rDNA sequences
- Author
-
Michael J. Donoghue, David S. Hibbett, and Elizabeth M. Pine
- Subjects
biology ,Physiology ,Clavariaceae ,Cell Biology ,General Medicine ,biology.organism_classification ,Cantharellaceae ,Sphaerobolus ,Evolutionary biology ,Botany ,Clavulina ,Clavaria ,Genetics ,Clavarioid fungi ,Molecular Biology ,Ecology, Evolution, Behavior and Systematics ,Gomphus (fungus) ,Lentinellus - Abstract
Sequence data from mitochondrial and nuclear small subunit rDNA were used to estimate phylogenetic relationships of cantharelloid and cla- varioid Homobasidiomycetes. Sixty-five diverse Homobasidiomycete species were investigated, in- cluding 23 cantharelloid and clavarioid species. Al- though nodes deep in the tree could not be resolved, four lineages containing cantharelloid and clavarioid fungi were identified. (i) Cantharellaceae (Canthar- ellus, Craterellus) is closely related to Hydnum, which is toothed, Stichoclavaria, which is a simple club, and Clavulina, which is coralloid. These taxa all have stichic nuclear division, which is a synapomorphy supporting this clade. (ii) Clavariadelphus is closely related to Gomphus and Ramaria. This relationship is supported by green reactions of sporocarps treated with iron salts, which is reflective of the presence of the compound pistillarin. The nearest relatives of these cantharelloid and clavarioid fungi are gastero- mycetes, including the earth star Geastrum, the stink- horn Pseudocolus, and the "cannon-ball fungus" Sphaerobolus. (iii) The clavarioid fungi Clavaria, Cla- vulinopsis, Pterula, and Typhula appear to be derived from the lineage that contains most of the gilled fun- gi. (iv) Clavicorona is closely related to Auriscalpium, which is toothed, and Lentinellus, which is gilled. This lineage is united by amyloid spore ornamenta- tion. Although these results suggest that there has been extensive convergence in fruiting body mor- phology, certain anatomical and biochemical features appear to be phylogenetically informative, notably stichic nuclear division, presence of pistillarin, and cyanophily or amyloidity of spore ornamentation.
- Published
- 1999
- Full Text
- View/download PDF
42. Cnidaria, Anthozoa, Octocorallia, Anthotelidae, Tripalea clavaria (Studer, 1878): distribution extension, first record for subtropical waters, Bahia, Brazil
- Author
-
Carlos D. Pérez and Bárbara de Moura Neves
- Subjects
Cnidaria ,Ecology ,Octocorallia ,biology ,business.industry ,Distribution (economics) ,Subtropics ,biology.organism_classification ,Geography ,lcsh:Biology (General) ,Anthozoa ,Clavaria ,business ,lcsh:QH301-705.5 ,Ecology, Evolution, Behavior and Systematics - Abstract
None
- Published
- 2007
43. Clavaria mushrooms and extracts: investigation on valuable components and antioxidant properties
- Author
-
Senka Vidović, Stela Jokić, and Zoran Zeković
- Subjects
Antioxidant ,biology ,Pistillarin ,Chemistry ,Radical ,medicine.medical_treatment ,chemistry.chemical_element ,Zinc ,biology.organism_classification ,Biochemistry ,mushrooms ,Clavaria sp ,pistillarin ,Selenium ,antioxidant activity ,Clavaria ,medicine ,Food science ,Hplc method ,IC50 ,Food Science - Abstract
Two Clavaria mushrooms were investigated as sources of antioxidant compounds, essential trace elements Selenium and Zinc, and as efficient antioxidants in elimination/inhibition of different radical species. Using HPLC method, pistillarin - rare siderphore compound characterized with high antioxidant activity, was detected in both extracts. Higher content of pistillarin has been measured in C. pistillaris extract. The same extract contained the higher content of Selenium, 3.051 μg/g. Both extracts showed important antioxidant activity. For C. pistillaris extract lower IC50 value has been measured and higher antioxidant activity against O2˙- radical has been detected. Although the content of pistillarin was higher in the case of C. pistillaris, at the concentration of 0.2 mg/ml C. fennica extract showed just some higher antioxidant activity against ˙OH radicals, 82% and 87%, respectively.
- Published
- 2014
44. Castelló d’Empúries davant la carestia de gra de 1374-1376
- Author
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Martí Arau, Albert
- Subjects
Carestia ,cerca de gra ,clavaria ,cereals ,deute públic ,importació ,Castelló d’Empúries 1374-1376 ,Shortage ,search for grains ,accounts ,public debt ,import - Abstract
Entre 1374 i 1376, la ribera occidental de la mar Mediterrània va experimentar una intensa onada de calor que causà una de les caresties de cerealsmés greus de la baixa edatmitjana. Atesa la centralitat del pa en la dieta alimentària de la població urbana, els governsmunicipals catalans es mostraren especialment preocupats davant aquesta penúria de gra, ja que podia provocar importants trasbalsos socials. En aquest article descriurem les mesures endegades pel consistori de Castelló d’Empúries a l’hora d’assegurar l’aprovisionament de la població i, per fer-ho, hem dividit les diverses iniciatives en funció de l’àmbit geogràfic en què es produïren: la confiscació i redistribució de gra a nivellmunicipal; les cerques de cereals per diversos indrets del comtat d’Empúries; i les compres de forment a importants places comercials internacionals, com ara al regne de França o a l’illa de Sicília., Between 1374 and 1376, the western shore of the Mediterranean experienced an intense heat wave which caused one of the most serious cereal shortages of the Middle Ages. Because of the importance of bread in the diet of the urban population, Catalan municipal authorities were especially worried about this grain shortage, fearing it could cause substantial social upheavals. In this article we describe the measures undertaken by the council of Castelló d’Empúries to assure the provisioning of the population. To do so, we have divided the diverse initiatives according to the geographic area in which they were applied: confiscation and redistribution of grains on municipal level; search for cereals in different localities of the County of Empúries; and the purchase of wheat on important international markets, such as France or Sicily.
- Published
- 2011
45. ChemInform Abstract: New Sesquiterpenes from Edible Fungus Clavicorona pyxidata
- Author
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Yuemao Shen, Zhong-Hui Zheng, Chunhua Lu, Lin Xinjian, Wenjin Su, and Yongbiao Zheng
- Subjects
Terpene ,biology ,Chemistry ,Clavaria ,Organic chemistry ,Fermentation ,General Medicine ,Edible fungus ,Clavicorona pyxidata ,biology.organism_classification ,Mass spectrometry ,Chemical correlation - Abstract
Three new sesquiterpenes, pyxidatol A–C (1–3, resp.), were obtained from the fermentation culture of Clavaria pyxidata, together with two known ones, tsugicoline E (4) and omphadiol (5). Their structures were elucidated through spectroscopic analyses, including 1D- and 2D-NMR experiments, HR-ESI-Q-TOF mass spectrometry, chemical correlation, and X-ray single-crystal diffraction.
- Published
- 2009
- Full Text
- View/download PDF
46. Clavaria muscoides Linnaeus 1753
- Author
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Jarvis, Charlie
- Subjects
Agaricomycetes ,Clavariaceae ,Clavaria ,Basidiomycota ,Clavaria muscoides ,Fungi ,Biodiversity ,Agaricales ,Taxonomy - Abstract
Clavaria muscoides Linnaeus, Species Plantarum 2: 1183. 1753. "Habitat inter Muscos." RCN: 8510. Type not designated. Original material: [icon] in Ray, Syn. Meth. Stirp. Brit., ed. 3: 16, t. 24, f. 7. 1724. Current name: Clavaria muscoides L. (Clavariaceae)., Published as part of Jarvis, Charlie, 2007, Chapter 7: Linnaean Plant Names and their Types (part C), pp. 370-473 in Order out of Chaos. Linnaean Plant Types and their Types, London :Linnaean Society of London in association with the Natural History Museum on page 424, DOI: 10.5281/zenodo.291971
- Published
- 2007
- Full Text
- View/download PDF
47. Clavaria fragilis Holmskjold 1821
- Author
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Jarvis, Charlie
- Subjects
Agaricomycetes ,Clavaria fragilis ,Clavariaceae ,Clavaria ,Basidiomycota ,Fungi ,Biodiversity ,Agaricales ,Taxonomy - Abstract
Clavaria fragilis Holmskjold: Fries, Systema Mycologicum 1: 465. 1821, nom. cons. Type not designated. Original material: none traced. Generitype of Clavaria Linnaeus: Fr., nom. cons. Current name: Clavaria fragilis Holmsk.: Fr. (Clavariaceae)., Published as part of Jarvis, Charlie, 2007, Chapter 7: Linnaean Plant Names and their Types (part C), pp. 370-473 in Order out of Chaos. Linnaean Plant Types and their Types, London :Linnaean Society of London in association with the Natural History Museum on page 424, DOI: 10.5281/zenodo.291971
- Published
- 2007
- Full Text
- View/download PDF
48. New C-secosteroids from the gorgonian Tripalea clavaria
- Author
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Gabriel Genzano, Jorge Alejandro Palermo, and Maria Florencia Rodriguez Brasco
- Subjects
Staphylococcus aureus ,Antifungal Agents ,Magnetic Resonance Spectroscopy ,Stereochemistry ,Clinical Biochemistry ,Biochemistry ,Secosteroids ,Endocrinology ,Botany ,Clavaria ,Candida albicans ,Escherichia coli ,Animals ,Molecular Biology ,Pharmacology ,biology ,Molecular Structure ,Organic Chemistry ,Absolute configuration ,biology.organism_classification ,Anthozoa ,Sterol ,Anti-Bacterial Agents ,Gorgonian ,Botrytis ,Bacillus subtilis - Abstract
Seven new C-secosteroids were isolated from the gorgonian Tripalea clavaria collected from the South Atlantic. These compounds have a Delta(5), 9,11-secosteroid nucleus together with a 22S hydroxyl group. The absolute configuration of the 22-hydroxyl group was determined with the help of COSY spectra of the Mosher esters of the compounds.
- Published
- 2007
49. Reconstructing the Clavariaceae using nuclear large subunit rDNA sequences and a new genus segregated from Clavaria
- Author
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David J. McLaughlin and Bryn T. M. Dentinger
- Subjects
0106 biological sciences ,0301 basic medicine ,Physiology ,Molecular Sequence Data ,Zoology ,Clavariaceae ,010603 evolutionary biology ,01 natural sciences ,DNA, Ribosomal ,03 medical and health sciences ,Clavaria ,Genetics ,Fruiting Bodies, Fungal ,Clavarioid fungi ,DNA, Fungal ,Molecular Biology ,Ecology, Evolution, Behavior and Systematics ,Phylogeny ,Clavulinopsis ,Ramariopsis ,biology ,Base Sequence ,Alloclavaria ,Cell Biology ,General Medicine ,030108 mycology & parasitology ,Plants ,biology.organism_classification ,Biological Evolution ,Corticioid fungi ,Macrotyphula ,Agaricales ,Sequence Alignment - Abstract
Fungi that produce clavarioid fruit bodies have evolved independently many times in the Basidiomycota. The evolutionary significance of this morphology is difficult to interpret because the phylogenetic positions of many clavarioid fungi are still unknown. In this study we examined the phylogenetic diversity of the Clavariaceae sensu lato among Homobasidiomycetidae by adding partial nuclear large subunit ribosomal DNA sequences from clavarioid and corticioid fungi to a large euagaric dataset and analyzing them both together and separately. Our results indicate that the clavarioid morphology has evolved at least five times in the euagarics while the inclusion of type species enabled us to evaluate the taxonomic consequences of this polyphyletic distribution. Although the sampling available at present is incomplete, a qualitative assessment of our phylogenetic hypotheses indicates that the clavarioid habit might not be as evolutionary labile as previously reported. We propose the new genus Alloclavaria to accommodate Clavaria purpurea, which is not related to Clavaria but is derived within the hymenochaetoid clade. The Physalacriaceae and Clavariaceae are redefined to reflect monophyletic groups, and the limits of Clavaria, Clavulinopsis and Ramariopsis should be reconsidered when additional data are available.
- Published
- 2007
50. Grasslands in the coastal dunes: the effect of nature management on the mycota
- Author
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Leo M. Jalink and Marijke M. Nauta
- Subjects
geography ,geography.geographical_feature_category ,biology ,Ecology ,Trichoglossum ,Entoloma ,biology.organism_classification ,Grassland ,Mycology ,Clavaria ,Grazing ,Environmental science ,Hygrocybe ,Clavulinopsis - Published
- 2001
- Full Text
- View/download PDF
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