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Despite the many restoration measures launched to prevent the Eelfrom further decline, glass eel recruitment and yellow eel density remain troublesome. Eel life is challenging in Flemish waters, where migration routes are blocked by barriers, where unnatural banks and toxic substances hamper growth and reproductive capacity and where pumping stations abruptly end many Eels’ lives. In spite of high levels of pollutants in its meat, Eels still end up on anglers plates (ca. 30 tons/year). Urgent actions are needed to increase the amount of easily accessible high-quality watercourses with more natural flow dynamics. As long as the tides are not turned, a more vigorous European policy on the restriction of the Eel fishery (including elvers) seems indispensable.

Due to a recruitment decline of more than 90% in 30 years, the European eel (Anguilla anguilla L.) has been classified by IUCN as critically endangered. Although the species has been studied intensively to obtain knowledge to improve management, studies about the resident yellow stage are relatively scarce. In this study, 52 large female yellow eels were tagged with acoustic transmitters in a Belgian polder system and tracked by a network of 23 automatic listening stations. We studied both circadian and seasonal movement patterns and the effect of environmental variables on these patterns. Large female yellow eels were most active at night in late summer and early autumn. A generalised linear mixed model showed that their movement is only slightly influenced by environmental variables. Moreover, as yellow eels show high site fidelity (i.e., the majority was detected only in the habitat type of their catch-release location), they do not encounter many human-induced connectivity problems in polder systems, which makes these systems highly suitable as eel growth habitat. These results can contribute to an effective eel management regarding habitat protection and restoration.

Among the many man-made structures that facilitate shipping, navigable canals take an important position. These canals may offer energetically favourable migration routes for diadromous fish, but they may also obstruct fish migration, for instance at shipping locks. Because the use of shipping canals by, and their effects on, migrating fish remain unknown, we assessed whether these canals can play a significant role in the migration of the critically endangered European eel. Only one third of 70 acoustically tagged silver eels completed migration through a shipping canal, and did so at a very low pace (average -1) due to delays at shipping locks and most likely also due to the disruption of water flow. These delays may come at an energetic cost, hampering the chances of successful migration. Knowledge on the impact of shipping canals on diadromous fish is crucial for proper management regulations. For instance, the observation that eels mostly migrated at night and during spring and autumn can support water managers to define adequate measures to improve eel migration in shipping canals.

Although twaite shad (Alosa fallax Lacépède 1803) declined substantially in many European rivers, its numbers increased since 2007 in the Belgian Zeeschelde. Since twaite shad is of conservation concern, further knowledge on its migration and reproductive behaviour is needed and acoustic telemetry would be a relevant tool to assess these behaviours. Shads are very sensitive fish showing adverse reactions to handling and anesthesia, specifically twaite shad. Therefore, this species is rather unsuitable for internal implantation of electronic tags, such as acoustic, radio and data storage tags. Preliminary tests are needed to assess the impact of external tagging on twaite shad survival. Here we describe a fish friendly attachment procedure to externally tag the fish. The procedure is quick and may limit additional drag force on swimming as the tags are firmly attached to the body by a rubber plate. This procedure was developed in Belgium in spring 2015 to tag eight shads in the Zeeschelde. Five of these shads showed a migration pattern that generally corresponded with spawning activities observed visually in the river.

Obstacles like weirs, watermills and locks are barriers for migratory fish. The fact that specific fish species cannot reach their optimal spawning habitat can have severe consequences for the survival of these species. While numerous fish passage types have been designed to solve this problem, these are sometimes not efficient. More insight into fish behavior is needed to improve fish pass efficiency, and acoustic telemetry allows such detailed observation of spatio-temporal migration patterns. We present novel findings on fish behavior at anthropogenic structures based on acoustic telemetry. The impact of several constructions like sluices, weirs, pumping stations and small-scale hydropower plants will be assessed and potential solutions to enhance fish migration at these structures will be discussed. This approach will identify crucial information needs for effective fish passage management and reveal a range of opportunities for fish passage research.

Estuaries are among the most productive ecosystems in the world and are characterised by high habitat diversity. As transition areas between inland rivers and the open sea, they function as transport zones for diadromous species like the European eel (Anguilla anguilla), a catadromous fish species that migrates to the Sargasso Sea for spawning. However, information on the migratory behaviour of eel in estuaries is scarce. Therefore, more insight is needed to efficiently restore and conserve the species. We tracked 47 eels with acoustic telemetry between July 2012 and October 2015 and analysed their behaviour from the Braakman creek into the Scheldt Estuary, separated by a tidal barrier. Eels arrived in the Braakman between mid-summer and early winter and stayed there on average 44 days (0 - 578 days). As such, arrival in the Scheldt Estuary was much later: between early autumn and early winter. The average residence time in the Scheldt Estuary was considerably shorter than in the Braakman, and was only five days (0 - 64 days). The long residence time in the Braakman was probably due to the discontinuous operation of the tidal barrier, which is used to control the water level in the upstream wetland area. This resulted in a discontinuous flow conditions, leading to searching behaviour in eels. Eventually 37 eels did pass the sluice and reached the Scheldt Estuary; the 10 eels which did not pass the sluice were probably caught by a commercial eel fisherman in the Braakman creek. In the Scheldt Estuary, 26 eels migrated towards the sea, whereas eight took the opposite direction and three were only detected at the first receivers downstream of the sluice. The eight eels that did not migrate towards the sea showed estuarine retention behaviour. They could have been injured by the tidal barrier or missed the right moment to migrate, and could be waiting in the estuary until favourable conditions are met to proceed their journey. Our results indicate that eel migration is obstructed by a tidal barrier, which resulted in delayed eel migration. As the migratory period occurred from mid-summer to early winter, this information can be implemented in management plans such as environmental windows to open the sluice during eel migration if circumstances allow such measurements.

Migratory fish such as river lamprey and twaite shad are important indicators of ecosystem functioning. Over the past century, most migratory fish have disappeared from the river Scheldt due to human impacts. The previous study on migratory fishes in the Scheldt showed however that most species show the first signs of recovery (Stevens et al., 2009). For both river lamprey and twaite shad there are strong indications that they reproduce in the Scheldt. However, the spawning and nursery habitats of both species are unknown and it is unclear whether the preconditions for a sustainable recovery are met. The spawning and nursery habitat of river lamprey can be located through targeted sampling of the larvae in the sediment. Sampling with fyke nets showed that adult river lamprey migrate mainly to the Bovenschelde and Zwalmbeek. In both rivers a number of locations were selected, which are, according to the literature, expected to be suitable habitats for the larvae of river lamprey. Wadable sites were sampled with a specially designed sediment pump and the deeper sites with a Van Veen grab. In neither of these rivers, however, river lamprey larvae could be found and no spawning sites could be identified. Possible reasons for the lack of larvae in the samples are (1) that no suitable larval habitat is present in the studied areas, (2) that the larval density in the investigated habitats is low and hence sampling frequency should be increased, (3) that the River Bovenschelde and the River Zwalm are not the main spawning grounds for river lamprey in the Scheldt. Telemetry of adult river lamprey could be a possible solution to locate the spawning grounds. In order to improve the reproduction and survival of river lamprey in the River Bovenschelde, the migration barriers in the Scheldt and its tributaries should be cleared and sufficient larval habitat should be availability. Larval habitat could be created in the River Zwalm and other tributaries through the restoration of natural banks. In addition, mud and sand banks in the Bovenschelde should be protected as much as possible as potential larval habitat.The population of twaite shad in the Scheldt is too small to identify the critical habitats by sampling in the field. Therefore, a habitat suitability model for spawning and larval shad was constructed based on literature data. Hereto, we first selected the environmental variables that determine habitat suitability. Next, for each variable the tolerance range was determined. Finallly, the variables were combined using fuzzy logic in order to determine the degree of suitability of a habitat. The model predicts the presence of suitable spawning habitat in the Upper Zeeschelde, upstream of the River Durme. Later in the season, when the water temperature rises, suitable spawning habitat is also present in the Rivers Kleine Nete and Grote Nete. Suitable habitat for larval shad is located mainly in the Upper Zeeschelde upstream Rupelmonde and in the River Rupel. Spawning of twaite shad takes place in the main channel and during their ontogeny the larvae migrate to the edges of the main channel and to side channels.Therefore, in areas with suitable spawning and larval habitat, both the main and side channels need protection. In particular mudflats, sand flats and subtidal low dynamic habitats should be safeguarded. Dredging of these habitats thus mortgages the recovery of the twaite shad population in the Scheldt. The oxygen concentration in the estuary has been greatly improved in recent years.However, in summer a low-oxygen zone in the freshwater area persists, comprising the upstream migration of adults and the survival of larvae. Periodic hypoxic conditions should therefore be avoided and a minimum oxygen content of 5 mg / l is essential for both adults and larvae. During the last century, hydrodynamics in the estuary has increased markedly. As a result, larvae have more difficulties in maintaining their position in suitable habitat. Actions that increase the river/tidal flow or eliminate local retention areas should therefore be avoided.