39 results on '"Coenjaerts F"'
Search Results
2. Aetiology of lower respiratory tract infection in adults in primary care: a prospective study in 11 European countries
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Ieven, M., Coenen, S., Loens, K., Lammens, C., Coenjaerts, F., Vanderstraeten, A., Henriques-Normark, B., Crook, D., Huygen, K., Butler, C.C., Verheij, T.J.M., Little, P., Zlateva, K., van Loon, A., Claas, E.C.J., and Goossens, H.
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- 2018
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3. Lower respiratory tract infection in the community: associations between viral aetiology and illness course
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MS Infectieziekten, Biostatistiek Onderzoek, Other research (not in main researchprogram), MS Interne Geneeskunde, Infection & Immunity, HAG Infectieziekten, MMB onderwijs, MMB, JC onderzoeksprogramma Infectieziekten, MMB Research line 3a, Vos, L. M., Bruyndonckx, R., Zuithoff, N. P.A., Little, P., Oosterheert, J. J., Broekhuizen, B. D.L., Lammens, C., Loens, K., Viveen, M., Butler, C. C., Crook, D., Zlateva, K., Goossens, H., Claas, E. C.J., Ieven, M., Van Loon, A. M., Verheij, T. J.M., Coenjaerts, F. E.J., GRACE Consortium, MS Infectieziekten, Biostatistiek Onderzoek, Other research (not in main researchprogram), MS Interne Geneeskunde, Infection & Immunity, HAG Infectieziekten, MMB onderwijs, MMB, JC onderzoeksprogramma Infectieziekten, MMB Research line 3a, Vos, L. M., Bruyndonckx, R., Zuithoff, N. P.A., Little, P., Oosterheert, J. J., Broekhuizen, B. D.L., Lammens, C., Loens, K., Viveen, M., Butler, C. C., Crook, D., Zlateva, K., Goossens, H., Claas, E. C.J., Ieven, M., Van Loon, A. M., Verheij, T. J.M., Coenjaerts, F. E.J., and GRACE Consortium
- Published
- 2021
4. Detection of multiple respiratory pathogens during primary respiratory infection: nasal swab versus nasopharyngeal aspirate using real-time polymerase chain reaction
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Meerhoff, T. J., Houben, M. L., Coenjaerts, F. E. J., Kimpen, J. L. L., Hofland, R. W., Schellevis, F., and Bont, L. J.
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- 2010
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5. CD200 receptor controls sex-specific TLR7 responses to viral infection: W55.004
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Karnam, G., Rygiel, T. P., Raaben, M., Grinwis, G., Coenjaerts, F., Ressing, M., Rottier, P., de Haan, C., and Meyaard, L.
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- 2012
6. Disease Severity and Viral Load Are Correlated in Infants With Primary Respiratory Syncytial Virus Infection in the Community
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Houben, M. L., Coenjaerts, F. E.J., Rossen, J. W.A., Belderbos, M. E., Hofland, R. W., Kimpen, J. L.L., and Bont, L.
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- 2010
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7. The role of respiratory viruses and M. pneumoniae in lower respiratory tract infections in primary care: O127
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Ieven, M., Loens, K., Coenjaerts, F., Lammens, C., Vanderstraeten, A., Verheij, T., Little, P., Goossens, H., and Claas, E. C.J.
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- 2009
8. Performance of monoplex and multiplex nucleic acid amplification tests for the detection of a range of respiratory pathogens: O49
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Loens, K., Claas, E. C.J., Coenjaerts, F., Goossens, H., MacKay, W. G., Wallace, P., Scott, C., and Van Loon, A. M.
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- 2009
9. Cryptococcal capsular glucuronoxylomannan reduces ischaemia-related neutrophil influx
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Ellerbroek, P. M., Schoemaker, R. G., van Veghel, R., Hoepelman, A. I. M., and Coenjaerts, F. E. J.
- Published
- 2004
10. The impact of 13-valent pneumococcal conjugate vaccination on virus-associated community-acquired pneumonia in elderly : Exploratory analysis of the CAPiTA trial
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Huijts, S. M., Coenjaerts, F. E.J., Bolkenbaas, M., van Werkhoven, C. H., Grobbee, D. E., and Bonten, M. J.M.
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Microbiology (medical) ,13-valent pneumococcal conjugate vaccine ,community-acquired pneumonia ,Infectious Diseases ,Journal Article ,viral community-acquired pneumonia ,viral pneumonia ,influenza virus - Abstract
Objectives: Our objective was to evaluate whether vaccination with the 13-valent pneumococcal conjugate vaccine (PCV13) prevents the incidence of community-acquired pneumonia (CAP) caused by influenza (influenza-associated CAP, IA-CAP) or other respiratory viruses in the elderly. Methods: This analysis was part of the Community-Acquired Pneumonia immunization Trial in Adults (CAPiTA); a double blind, randomized, placebo-controlled trial in 84 496 immunocompetent individuals aged ≥65 years. CAP was defined by clinical and radiological criteria, and oropharyngeal swabs were collected from all individuals referred to a sentinel centre with a clinical suspicion of pneumonia. Presence of influenza A and B, parainfluenza 1, 2, 3 and 4, human adeno-, boca-, corona-, metapneumo-, rhino- and respiratory syncytial viruses was determined by real-time PCR. Results: Of 3209 episodes of suspected pneumonia, viral aetiology was tested in 2917 and proportions with influenza virus, human metapneumovirus and respiratory syncytial virus were 4.6%, 2.5% and 3.1%, respectively. There were 1653 oropharyngeal swabs for PCR testing available from 1814 episodes that fulfilled criteria for CAP, yielding 23 first episodes of IA-CAP in the PCV13 and 35 in the in placebo group—vaccine efficacy for IA-CAP of 34.4% (95% CI –11.1% to 61.2%; p 0.117). Annual influenza vaccination was received by 672 (87.2%) in the PCV13 group and 719 (87.7%) in the placebo group of the confirmed CAP cases. Conclusion: In a randomized study of 84 496 elderly individuals with a high uptake of influenza vaccination, PCV13 was not associated with a statistically significant reduction of influenza or virus-associated CAP. Overall incidence of non-influenza viral pneumonia was low.
- Published
- 2018
11. The impact of 13-valent pneumococcal conjugate vaccination on virus-associated community-acquired pneumonia in elderly: Exploratory analysis of the CAPiTA trial
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Arts Assistenten Longziekten, Infection & Immunity, MMB KAM, Epi Infectieziekten Team 1, JC onderzoeksprogramma Infectieziekten, Cardiovasculaire Epi Team 9, Circulatory Health, JC onderzoeksprogramma Cardiovasculaire Epidemiologie, Epi Infectieziekten, Huijts, S. M., Coenjaerts, F. E.J., Bolkenbaas, M., van Werkhoven, C. H., Grobbee, D. E., Bonten, M. J.M., CAPiTA study team, Arts Assistenten Longziekten, Infection & Immunity, MMB KAM, Epi Infectieziekten Team 1, JC onderzoeksprogramma Infectieziekten, Cardiovasculaire Epi Team 9, Circulatory Health, JC onderzoeksprogramma Cardiovasculaire Epidemiologie, Epi Infectieziekten, Huijts, S. M., Coenjaerts, F. E.J., Bolkenbaas, M., van Werkhoven, C. H., Grobbee, D. E., Bonten, M. J.M., and CAPiTA study team
- Published
- 2018
12. Performance of Different Mono- and Multiplex Nucleic Acid Amplification Tests on a Multipathogen External Quality Assessment Panel
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Loens, K., Loon, A.M. van, Coenjaerts, F., Aarle, Y. van, Goossens, H., Wallace, P., Claas, E.J.C., Ieven, M., and GRACE Study Grp
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Microbiology (medical) ,Quality Assurance, Health Care ,medicine.disease_cause ,Human metapneumovirus ,Community-acquired pneumonia ,Germany ,Virology ,External quality assessment ,medicine ,Nucleic Acid Amplification Tests ,Humans ,Multiplex ,Respiratory Tract Infections ,Netherlands ,biology ,Bacteria ,Nucleic acid amplification technique ,Bacterial Infections ,Reference Standards ,biology.organism_classification ,medicine.disease ,Molecular diagnostics ,Molecular Diagnostic Techniques ,Chlamydophila pneumoniae ,Virus Diseases ,Viruses ,Nucleic Acid Amplification Techniques - Abstract
An external quality assessment (EQA) panel consisting of a total of 48 samples in bronchoalveolar lavage (BAL) fluid or transport medium was prepared in collaboration with Quality Control for Molecular Diagnostics (QCMD) ( www.qcmd.org ). The panel was used to assess the proficiency of the three laboratories that would be responsible for examining the 6,000 samples to be collected in the GRACE Network of Excellence ( www.grace-lrti.org ). The main objective was to decide on the best-performing testing approach for the detection of influenza viruses A and B, parainfluenza virus types 1 to 3, respiratory syncytial virus (RSV), human metapneumovirus, coronavirus, rhinovirus, adenovirus, Chlamydophila pneumoniae , Mycoplasma pneumoniae , and Legionella pneumophila by nucleic acid amplification techniques (NAATs). Two approaches were chosen: (i) laboratories testing samples using their in-house procedures for extraction and amplification and (ii) laboratories using their in-house amplification procedures on centrally extracted samples. Furthermore, three commercially available multiplex NAAT tests—the ResPlex (Qiagen GmbH, Hilden, Germany), RespiFinder plus (PathoFinder, Maastricht, The Netherlands), and RespiFinder Smart 21 (PathoFinder) tests—were evaluated by examination of the same EQA panel by the manufacturer. No large differences among the 3 laboratories were noticed when the performances of the assays developed in-house in combination with the in-house extraction procedures were compared. Also, the extraction procedure (central versus local) had little effect on performance. However, large differences in amplification efficacy were found between the commercially available tests; acceptable results were obtained by using the PathoFinder assays.
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- 2011
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13. Peptide fingerprinting as a successful method for identification of influenza A viruses
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Majchrzykiewicz-Koehorst, J.A., Coenjaerts, F., Trip, H., Jong, A.L., Hulst, A.G., Heikens, E., and Paauw, A.
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Life ,Health ,CBRN - CBRN Protection ,ELSS - Earth, Life and Social Sciences - Published
- 2013
14. Mass spectrometry as a successful technique for identification of respiratory viruses such as influenza A
- Author
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Majchrzykiewicz-Koehorst, J.A., Trip, H., Coenjaerts, F., Jong, A.L., Hulst, A.G., Sedee, N.J.A., Heikens, E., and Paauw, A.
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Life ,Health ,CBRN - CBRN Protection ,ELSS - Earth, Life and Social Sciences - Published
- 2013
15. Performance of Different Mono- and Multiplex Nucleic Acid Amplification Tests on a Multipathogen External Quality Assessment Panel
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Loens, K., primary, van Loon, A. M., additional, Coenjaerts, F., additional, van Aarle, Y., additional, Goossens, H., additional, Wallace, P., additional, Claas, E. J. C., additional, and Ieven, M., additional
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- 2012
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16. Disease Severity and Viral Load Are Correlated in Non-Hospitalized Infants with Primary RSV Infection.
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Houben, M, primary, Coenjaerts, F, additional, Rossen, J, additional, Belderbos, M, additional, Hofland, R, additional, Kimpen, J, additional, and Bont, L, additional
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- 2009
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17. Aggregation of Cryptococcus neoformans by Surfactant Protein D Is Inhibited by Its Capsular Component Glucuronoxylomannan
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van de Wetering, J. K., primary, Coenjaerts, F. E. J., additional, Vaandrager, A. B., additional, van Golde, L. M. G., additional, and Batenburg, J. J., additional
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- 2004
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18. The autoantigen Ku is indistinguishable from NF IV, a protein forming multimeric protein-DNA complexes.
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Stuiver, M H, primary, Coenjaerts, F E, additional, and van der Vliet, P C, additional
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- 1990
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19. Aggregation of Cryptococcus neoformansby Surfactant Protein D Is Inhibited by Its Capsular Component Glucuronoxylomannan
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van de Wetering, J. K., Coenjaerts, F. E. J., Vaandrager, A. B., van Golde, L. M. G., and Batenburg, J. J.
- Abstract
ABSTRACTCryptococcus neoformansis an opportunistic pathogen invading the immunocompromised host. Infection starts with the inhalation of acapsular or sparsely encapsulated cells, after which capsule synthesis is initiated. The capsule is the main virulence factor of this yeast-like fungus. Pulmonary surfactant protein D (SP-D) is an important component of the local innate defense system. In the present study, interactions of SP-D with intact C. neoformanscells and their isolated capsular components were investigated. Although encapsulated cryptococci were bound, SP-D showed the highest affinity for acapsular C. neoformans. Only acapsular cryptococci were aggregated by SP-D. Furthermore, the cryptococcal capsular components glucuronoxylomannan (GXM) and mannoprotein 1 (MP1) were bound with relatively high affinity, in contrast to GalXM and MP2. Binding as well as aggregation of acapsular C. neoformansby SP-D could be inhibited by GXM in concentrations that are likely to be present in the lung after infection, suggesting that not only the capsule hampers SP-D function within the innate defense system of the lung but also the secreted capsular component GXM.
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- 2004
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20. Quantitative analysis of phagocytosis of Cryptococcus neoformans by adherent phagocytic cells by fluorescence multi-well plate reader
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Walenkamp, A. M., Scharringa, J., Schramel, F. M., Coenjaerts, F. E., and Hoepelman, I. M.
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- 2000
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21. Cryptococcal glucuronoxylomannan delays translocation of leukocytes across the blood-brain barrier in an animal model of acute bacterial meningitis
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Lipovsky, M. M., Tsenova, L., Coenjaerts, F. E., Kaplan, G., Cherniak, R., and Hoepelman, A. I.
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- 2000
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22. Streptococcus pneumoniae induces secretion of vascular endothelial growth factor by human neutrophils.
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van Der Flier, M, Coenjaerts, F, Kimpen, J L, Hoepelman, A M, and Geelen, S P
- Abstract
Infection by pneumococci causes an acute inflammatory response associated with neutrophil influx, increased vascular permeability, and edema. Vascular endothelial growth factor (VEGF) is one of the most potent regulators of endothelial permeability. In vitro stimulation of neutrophils showed that pneumococci and purified pneumococcal cell wall induce VEGF secretion, independent of the presence of pneumolysin or polysaccharide capsule. The results of this study indicate VEGF is secreted in pneumococcal disease, suggesting a role as a mediator of increased vascular permeability.
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- 2000
23. A robust mouse model of HPIV-3 infection and efficacy of GS-441524 against virus-induced lung pathology.
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Lin Y, Khan M, Weynand B, Laporte M, Coenjaerts F, Babusis D, Bilello JP, Mombaerts P, Jochmans D, and Neyts J
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- Animals, Mice, Humans, Virus Replication drug effects, Female, Receptor, Interferon alpha-beta genetics, Receptor, Interferon alpha-beta metabolism, Receptor, Interferon alpha-beta deficiency, Adenosine analogs & derivatives, Adenosine pharmacology, Viral Tropism, Benzamides, Phthalimides, Disease Models, Animal, Lung virology, Lung pathology, Lung drug effects, Parainfluenza Virus 3, Human drug effects, Parainfluenza Virus 3, Human physiology, Antiviral Agents pharmacology, Respirovirus Infections drug therapy, Respirovirus Infections virology, Mice, Knockout
- Abstract
Human parainfluenza virus type 3 (HPIV-3) can cause severe respiratory tract infections. There are no convenient small-animal infection models. Here, we show viral replication in the upper and lower airways of AG129 mice (double IFNα/β and IFNγ receptor knockout mice) upon intranasal inoculation. By multiplex fluorescence RNAscope and immunohistochemistry followed by confocal microscopy, we demonstrate viral tropism to ciliated cells and club cells of the bronchiolar epithelium. HPIV-3 causes a marked lung pathology. No virus transmission of the virus was observed by cohousing HPIV-3-infected AG129 mice with other mice. Oral treatment with GS-441524, the parent nucleoside of remdesivir, reduced infectious virus titers in the lung, with a relatively normal histology. Intranasal treatment also affords an antiviral effect. Thus, AG129 mice serve as a robust preclinical model for developing therapeutic and prophylactic strategies against HPIV-3. We suggest further investigation of GS-441524 and its prodrug forms to treat HPIV-3 infection in humans., (© 2024. The Author(s).)
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- 2024
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24. Postoperative Staphylococcus aureus Infections in Patients With and Without Preoperative Colonization.
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Troeman DPR, Hazard D, Timbermont L, Malhotra-Kumar S, van Werkhoven CH, Wolkewitz M, Ruzin A, Goossens H, Bonten MJM, Harbarth S, Sifakis F, Kluytmans JAJW, Vlaeminck J, Vilken T, Xavier BB, Lammens C, van Esschoten M, Paling FP, Recanatini C, Coenjaerts F, Sellman B, Tkaczyk C, Weber S, Ekkelenkamp MB, van der Laan L, Vierhout BP, Couvé-Deacon E, David M, Chadwick D, Llewelyn MJ, Ustianowski A, Bateman A, Mawer D, Carevic B, Konstantinovic S, Djordjevic Z, Del Toro-López MD, Gallego JPH, Escudero D, Rojo MP, Torre-Cisneros J, Castelli F, Nardi G, Barbadoro P, Altmets M, Mitt P, Todor A, Bubenek-Turconi SI, Corneci D, Sandesc D, Gheorghita V, Brat R, Hanke I, Neumann J, Tomáš T, Laffut W, and Van den Abeele AM
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- Aged, Female, Humans, Male, Cohort Studies, Mastectomy, Staphylococcus aureus, Surgical Wound Infection prevention & control, Middle Aged, Breast Neoplasms complications, Staphylococcal Infections prevention & control
- Abstract
Importance: Staphylococcus aureus surgical site infections (SSIs) and bloodstream infections (BSIs) are important complications of surgical procedures for which prevention remains suboptimal. Contemporary data on the incidence of and etiologic factors for these infections are needed to support the development of improved preventive strategies., Objectives: To assess the occurrence of postoperative S aureus SSIs and BSIs and quantify its association with patient-related and contextual factors., Design, Setting, and Participants: This multicenter cohort study assessed surgical patients at 33 hospitals in 10 European countries who were recruited between December 16, 2016, and September 30, 2019 (follow-up through December 30, 2019). Enrolled patients were actively followed up for up to 90 days after surgery to assess the occurrence of S aureus SSIs and BSIs. Data analysis was performed between November 20, 2020, and April 21, 2022. All patients were 18 years or older and had undergone 11 different types of surgical procedures. They were screened for S aureus colonization in the nose, throat, and perineum within 30 days before surgery (source population). Both S aureus carriers and noncarriers were subsequently enrolled in a 2:1 ratio., Exposure: Preoperative S aureus colonization., Main Outcomes and Measures: The main outcome was cumulative incidence of S aureus SSIs and BSIs estimated for the source population, using weighted incidence calculation. The independent association of candidate variables was estimated using multivariable Cox proportional hazards regression models., Results: In total, 5004 patients (median [IQR] age, 66 [56-72] years; 2510 [50.2%] female) were enrolled in the study cohort; 3369 (67.3%) were S aureus carriers. One hundred patients developed S aureus SSIs or BSIs within 90 days after surgery. The weighted cumulative incidence of S aureus SSIs or BSIs was 2.55% (95% CI, 2.05%-3.12%) for carriers and 0.52% (95% CI, 0.22%-0.91%) for noncarriers. Preoperative S aureus colonization (adjusted hazard ratio [AHR], 4.38; 95% CI, 2.19-8.76), having nonremovable implants (AHR, 2.00; 95% CI, 1.15-3.49), undergoing mastectomy (AHR, 5.13; 95% CI, 1.87-14.08) or neurosurgery (AHR, 2.47; 95% CI, 1.09-5.61) (compared with orthopedic surgery), and body mass index (AHR, 1.05; 95% CI, 1.01-1.08 per unit increase) were independently associated with S aureus SSIs and BSIs., Conclusions and Relevance: In this cohort study of surgical patients, S aureus carriage was associated with an increased risk of developing S aureus SSIs and BSIs. Both modifiable and nonmodifiable etiologic factors were associated with this risk and should be addressed in those at increased S aureus SSI and BSI risk.
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- 2023
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25. Safety, efficacy, and pharmacokinetics of gremubamab (MEDI3902), an anti-Pseudomonas aeruginosa bispecific human monoclonal antibody, in P. aeruginosa-colonised, mechanically ventilated intensive care unit patients: a randomised controlled trial.
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Chastre J, François B, Bourgeois M, Komnos A, Ferrer R, Rahav G, De Schryver N, Lepape A, Koksal I, Luyt CE, Sánchez-García M, Torres A, Eggimann P, Koulenti D, Holland TL, Ali O, Shoemaker K, Ren P, Sauser J, Ruzin A, Tabor DE, Akhgar A, Wu Y, Jiang Y, DiGiandomenico A, Colbert S, Vandamme D, Coenjaerts F, Malhotra-Kumar S, Timbermont L, Oliver A, Barraud O, Bellamy T, Bonten M, Goossens H, Reisner C, Esser MT, and Jafri HS
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- Animals, Humans, Adolescent, Pseudomonas aeruginosa, Respiration, Artificial adverse effects, Double-Blind Method, Intensive Care Units, Antibodies, Monoclonal therapeutic use, Treatment Outcome, Pseudomonas Infections drug therapy, Pseudomonas Infections prevention & control, Pneumonia, Ventilator-Associated drug therapy
- Abstract
Background: Ventilator-associated pneumonia caused by Pseudomonas aeruginosa (PA) in hospitalised patients is associated with high mortality. The effectiveness of the bivalent, bispecific mAb MEDI3902 (gremubamab) in preventing PA nosocomial pneumonia was assessed in PA-colonised mechanically ventilated subjects., Methods: EVADE (NCT02696902) was a phase 2, randomised, parallel-group, double-blind, placebo-controlled study in Europe, Turkey, Israel, and the USA. Subjects ≥ 18 years old, mechanically ventilated, tracheally colonised with PA, and without new-onset pneumonia, were randomised (1:1:1) to MEDI3902 500, 1500 mg (single intravenous dose), or placebo. The primary efficacy endpoint was the incidence of nosocomial PA pneumonia through 21 days post-dose in MEDI3902 1500 mg versus placebo, determined by an independent adjudication committee., Results: Even if the initial sample size was not reached because of low recruitment, 188 subjects were randomised (MEDI3902 500/1500 mg: n = 16/87; placebo: n = 85) between 13 April 2016 and 17 October 2019. Out of these, 184 were dosed (MEDI3902 500/1500 mg: n = 16/85; placebo: n = 83), comprising the modified intent-to-treat set. Enrolment in the 500 mg arm was discontinued due to pharmacokinetic data demonstrating low MEDI3902 serum concentrations. Subsequently, enrolled subjects were randomised (1:1) to MEDI3902 1500 mg or placebo. PA pneumonia was confirmed in 22.4% (n = 19/85) of MEDI3902 1500 mg recipients and in 18.1% (n = 15/83) of placebo recipients (relative risk reduction [RRR]: - 23.7%; 80% confidence interval [CI] - 83.8%, 16.8%; p = 0.49). At 21 days post-1500 mg dose, the mean (standard deviation) serum MEDI3902 concentration was 9.46 (7.91) μg/mL, with 80.6% (n = 58/72) subjects achieving concentrations > 1.7 μg/mL, a level associated with improved outcome in animal models. Treatment-emergent adverse event incidence was similar between groups., Conclusions: The bivalent, bispecific monoclonal antibody MEDI3902 (gremubamab) did not reduce PA nosocomial pneumonia incidence in PA-colonised mechanically ventilated subjects. Trial registration Registered on Clinicaltrials.gov ( NCT02696902 ) on 11th February 2016 and on EudraCT ( 2015-001706-34 ) on 7th March 2016., (© 2022. The Author(s).)
- Published
- 2022
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26. Lower respiratory tract infection in the community: associations between viral aetiology and illness course.
- Author
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Vos LM, Bruyndonckx R, Zuithoff NPA, Little P, Oosterheert JJ, Broekhuizen BDL, Lammens C, Loens K, Viveen M, Butler CC, Crook D, Zlateva K, Goossens H, Claas ECJ, Ieven M, Van Loon AM, Verheij TJM, and Coenjaerts FEJ
- Subjects
- Adult, Belgium epidemiology, Convalescence, Coronavirus growth & development, Coronavirus pathogenicity, Female, Humans, Male, Metapneumovirus growth & development, Metapneumovirus pathogenicity, Netherlands epidemiology, Orthomyxoviridae growth & development, Orthomyxoviridae pathogenicity, Proportional Hazards Models, Prospective Studies, Respiratory Syncytial Virus, Human growth & development, Respiratory Syncytial Virus, Human pathogenicity, Respiratory Tract Infections classification, Respiratory Tract Infections diagnosis, Rhinovirus growth & development, Rhinovirus pathogenicity, Severity of Illness Index, Viral Load, Virus Diseases classification, Virus Diseases diagnosis, Primary Health Care statistics & numerical data, Respiratory Tract Infections epidemiology, Respiratory Tract Infections physiopathology, Virus Diseases epidemiology, Virus Diseases physiopathology
- Abstract
Objectives: This study determined associations between respiratory viruses and subsequent illness course in primary care adult patients presenting with acute cough and/or suspected lower respiratory tract infection., Methods: A prospective European primary care study recruited adults with symptoms of lower respiratory tract infection between November 2007 and April 2010. Real-time in-house polymerase chain reaction (PCR) was performed to test for six common respiratory viruses. In this secondary analysis, symptom severity (scored 1 = no problem, 2 = mild, 3 = moderate, 4 = severe) and symptom duration were compared between groups with different viral aetiologies using regression and Cox proportional hazard models, respectively. Additionally, associations between baseline viral load (cycle threshold (Ct) value) and illness course were assessed., Results: The PCR tested positive for a common respiratory virus in 1354 of the 2957 (45.8%) included patients. The overall mean symptom score at presentation was 2.09 (95% confidence interval (CI) 2.07-2.11) and the median duration until resolution of moderately bad or severe symptoms was 8.70 days (interquartile range 4.50-11.00). Patients with influenza virus, human metapneumovirus (hMPV), respiratory syncytial virus (RSV), coronavirus (CoV) or rhinovirus had a significantly higher symptom score than patients with no virus isolated (0.07-0.25 points or 2.3-8.3% higher symptom score). Time to symptom resolution was longer in RSV infections (adjusted hazard ratio (AHR) 0.80, 95% CI 0.65-0.96) and hMPV infections (AHR 0.77, 95% CI 0.62-0.94) than in infections with no virus isolated. Overall, baseline viral load was associated with symptom severity (difference 0.11, 95% CI 0.06-0.16 per 10 cycles decrease in Ct value), but not with symptom duration., Conclusions: In healthy, working adults from the general community presenting at the general practitioner with acute cough and/or suspected lower respiratory tract infection other than influenza impose an illness burden comparable to influenza. Hence, the public health focus for viral respiratory tract infections should be broadened., (Copyright © 2020. Published by Elsevier Ltd.)
- Published
- 2021
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27. The impact of 13-valent pneumococcal conjugate vaccination on virus-associated community-acquired pneumonia in elderly: Exploratory analysis of the CAPiTA trial.
- Author
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Huijts SM, Coenjaerts FEJ, Bolkenbaas M, van Werkhoven CH, Grobbee DE, and Bonten MJM
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- Aged, Aged, 80 and over, Community-Acquired Infections microbiology, Community-Acquired Infections virology, Double-Blind Method, Female, Humans, Incidence, Influenza Vaccines administration & dosage, Male, Netherlands epidemiology, Placebos administration & dosage, Pneumonia, Pneumococcal epidemiology, Pneumonia, Pneumococcal prevention & control, Streptococcus pneumoniae immunology, Vaccination statistics & numerical data, Community-Acquired Infections epidemiology, Pneumococcal Vaccines administration & dosage, Pneumonia, Viral epidemiology, Vaccines, Conjugate administration & dosage
- Abstract
Objectives: Our objective was to evaluate whether vaccination with the 13-valent pneumococcal conjugate vaccine (PCV13) prevents the incidence of community-acquired pneumonia (CAP) caused by influenza (influenza-associated CAP, IA-CAP) or other respiratory viruses in the elderly., Methods: This analysis was part of the Community-Acquired Pneumonia immunization Trial in Adults (CAPiTA); a double blind, randomized, placebo-controlled trial in 84 496 immunocompetent individuals aged ≥65 years. CAP was defined by clinical and radiological criteria, and oropharyngeal swabs were collected from all individuals referred to a sentinel centre with a clinical suspicion of pneumonia. Presence of influenza A and B, parainfluenza 1, 2, 3 and 4, human adeno-, boca-, corona-, metapneumo-, rhino- and respiratory syncytial viruses was determined by real-time PCR., Results: Of 3209 episodes of suspected pneumonia, viral aetiology was tested in 2917 and proportions with influenza virus, human metapneumovirus and respiratory syncytial virus were 4.6%, 2.5% and 3.1%, respectively. There were 1653 oropharyngeal swabs for PCR testing available from 1814 episodes that fulfilled criteria for CAP, yielding 23 first episodes of IA-CAP in the PCV13 and 35 in the in placebo group-vaccine efficacy for IA-CAP of 34.4% (95% CI -11.1% to 61.2%; p 0.117). Annual influenza vaccination was received by 672 (87.2%) in the PCV13 group and 719 (87.7%) in the placebo group of the confirmed CAP cases., Conclusion: In a randomized study of 84 496 elderly individuals with a high uptake of influenza vaccination, PCV13 was not associated with a statistically significant reduction of influenza or virus-associated CAP. Overall incidence of non-influenza viral pneumonia was low., (Copyright © 2017 The Authors. Published by Elsevier Ltd.. All rights reserved.)
- Published
- 2018
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28. Local IL-17A potentiates early neutrophil recruitment to the respiratory tract during severe RSV infection.
- Author
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Stoppelenburg AJ, Salimi V, Hennus M, Plantinga M, Huis in 't Veld R, Walk J, Meerding J, Coenjaerts F, Bont L, and Boes M
- Subjects
- Animals, Antibodies, Neutralizing, Flow Cytometry, Humans, Infant, Newborn, Mice, Mice, Inbred BALB C, Real-Time Polymerase Chain Reaction, Immunity, Innate immunology, Interleukin-17 immunology, Neutrophil Infiltration immunology, Respiratory Syncytial Virus Infections immunology, Respiratory System immunology
- Abstract
Respiratory syncytial virus (RSV) bronchiolitis triggers a strong innate immune response characterized by excessive neutrophil infiltration which contributes to RSV induced pathology. The cytokine IL-17A enhances neutrophil infiltration into virus infected lungs. IL-17A is however best known as an effector of adaptive immune responses. The role of IL-17A in early immune modulation in RSV infection is unknown. We aimed to elucidate whether local IL-17A facilitates the innate neutrophil infiltration into RSV infected lungs prior to adaptive immunity. To this end, we studied IL-17A production in newborns that were hospitalized for severe RSV bronchiolitis. In tracheal aspirates we measured IL-17A concentration and neutrophil counts. We utilized cultured human epithelial cells to test if IL-17A regulates RSV infection-induced IL-8 release as mediator of neutrophil recruitment. In mice we investigated the cell types that are responsible for early innate IL-17A production during RSV infection. Using IL-17A neutralizing antibodies we tested if IL-17A is responsible for innate neutrophil infiltration in mice. Our data show that increased IL-17A production in newborn RSV patient lungs correlates with subsequent neutrophil counts recruited to the lungs. IL-17A potentiates RSV-induced production of the neutrophil-attracting chemokine IL-8 by airway epithelial cells in vitro. Various lung-resident lymphocytes produced IL-17A during early RSV infection in Balb/c mice, of which a local population of CD4 T cells stood out as the predominant RSV-induced cell type. By removing IL-17A during early RSV infection in mice we showed that IL-17A is responsible for enhanced innate neutrophil infiltration in vivo. Using patient material, in vitro studies, and an animal model of RSV infection, we thus show that early local IL-17A production in the airways during RSV bronchiolitis facilitates neutrophil recruitment with pathologic consequences to infant lungs.
- Published
- 2013
- Full Text
- View/download PDF
29. Endothelial-specific deletion of connexin40 promotes atherosclerosis by increasing CD73-dependent leukocyte adhesion.
- Author
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Chadjichristos CE, Scheckenbach KE, van Veen TA, Richani Sarieddine MZ, de Wit C, Yang Z, Roth I, Bacchetta M, Viswambharan H, Foglia B, Dudez T, van Kempen MJ, Coenjaerts FE, Miquerol L, Deutsch U, Jongsma HJ, Chanson M, and Kwak BR
- Subjects
- Animals, Atherosclerosis immunology, Atherosclerosis pathology, Cell Adhesion immunology, Cells, Cultured, Connexins metabolism, Endothelial Cells metabolism, Gap Junctions metabolism, Green Fluorescent Proteins genetics, Mice, Mice, Transgenic, Monocytes metabolism, Monocytes pathology, RNA, Small Interfering, Signal Transduction immunology, Vasculitis immunology, Vasculitis pathology, Gap Junction alpha-5 Protein, 5'-Nucleotidase metabolism, Atherosclerosis physiopathology, Connexins genetics, Endothelial Cells pathology, Vasculitis physiopathology
- Abstract
Background: Endothelial dysfunction is the initiating event of atherosclerosis. The expression of connexin40 (Cx40), an endothelial gap junction protein, is decreased during atherogenesis. In the present report, we sought to determine whether Cx40 contributes to the development of the disease., Methods and Results: Mice with ubiquitous deletion of Cx40 are hypertensive, a risk factor for atherosclerosis. Consequently, we generated atherosclerosis-susceptible mice with endothelial-specific deletion of Cx40 (Cx40del mice). Cx40del mice were indeed not hypertensive. The progression of atherosclerosis was increased in Cx40del mice after 5 and 10 weeks of a high-cholesterol diet, and spontaneous lesions were observed in the aortic sinuses of young mice without such a diet. These lesions showed monocyte infiltration into the intima, increased expression of vascular cell adhesion molecule-1, and decreased expression of the ecto-enzyme CD73 in the endothelium. The proinflammatory phenotype of Cx40del mice was confirmed in another model of induced leukocyte recruitment from the lung microcirculation. Endothelial CD73 is known to induce antiadhesion signaling via the production of adenosine. We found that reducing Cx40 expression in vitro with small interfering RNA or antisense decreased CD73 expression and activity and increased leukocyte adhesion to mouse endothelial cells. These effects were reversed by an adenosine receptor agonist., Conclusions: Cx40-mediated gap junctional communication contributes to a quiescent nonactivated endothelium by propagating adenosine-evoked antiinflammatory signals between endothelial cells. Alteration in this mechanism by targeting Cx40 promotes leukocyte adhesion to the endothelium, thus accelerating atherosclerosis.
- Published
- 2010
- Full Text
- View/download PDF
30. The role of Toll-like receptors in regulating the immune response against respiratory syncytial virus.
- Author
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Klein Klouwenberg P, Tan L, Werkman W, van Bleek GM, and Coenjaerts F
- Subjects
- Animals, Humans, Immune Evasion, Immunity, Innate, Mice, Respiratory Syncytial Virus Infections drug therapy, Respiratory Syncytial Viruses immunology, Respiratory Syncytial Virus Infections immunology, Toll-Like Receptors immunology
- Abstract
Toll-like receptors (TLRs) play a distinct role in battling respiratory syncytial virus (RSV) infections. However, due to a lack of representative animal models and several early controversies, the field is unclear. In this systematic review, we have elucidated conflicting results and outlined important factors that might affect study outcomes. We reviewed studies that used different doses/viral strains, performed virus propagation in different cell lines, or used different mice strains. The following firm conclusions can be drawn: multiple TLRs activate innate immunity upon RSV infection; TLR4 can influence TLR2 expression, suggesting that optimal induction of multiple signaling pathways is required to elicit protective, rather than deleterious innate immune responses following infection; in mice, TLR4, TLR2/-6, and TLR7 have immune-stimulating properties, while TLR3 activation occurs later and appears to downregulate immune responses; in humans, polymorphism studies have demonstrated an important role for TLR4-signaling; and activation of TLR-signaling leads to antiviral cytokine production, such as TNF-a and IFNs. Viral factors may block these pathways, thereby contributing to immune evasion and RSV survival. A better understanding of the complex interplay between TLRs and severe RSV infections might lead to efficient prophylactic and therapeutic treatments, as well as the development of adequate vaccines combined with TLR adjuvants.
- Published
- 2009
- Full Text
- View/download PDF
31. Antibody neutralization of vascular endothelial growth factor (VEGF) fails to attenuate vascular permeability and brain edema in experimental pneumococcal meningitis.
- Author
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van der Flier M, Coenjaerts FE, Mwinzi PN, Rijkers E, Ruyken M, Scharringa J, Kimpen JL, Hoepelman AI, and Geelen SP
- Subjects
- Animals, Antibodies, Blocking pharmacology, Antibodies, Monoclonal administration & dosage, Antibodies, Monoclonal pharmacology, Antibodies, Monoclonal, Humanized, Bevacizumab, Brain Edema blood, Brain Edema cerebrospinal fluid, Cell Movement immunology, Cisterna Magna, Female, Humans, Injections, Intravenous, Leukocytes immunology, Leukocytes pathology, Meningitis, Pneumococcal blood, Meningitis, Pneumococcal cerebrospinal fluid, Mice, Rabbits, Vascular Endothelial Growth Factor A blood, Vascular Endothelial Growth Factor A cerebrospinal fluid, Water-Electrolyte Balance, Antibodies, Blocking administration & dosage, Brain Edema immunology, Brain Edema physiopathology, Capillary Permeability immunology, Meningitis, Pneumococcal immunology, Meningitis, Pneumococcal physiopathology, Vascular Endothelial Growth Factor A antagonists & inhibitors, Vascular Endothelial Growth Factor A immunology
- Abstract
To determine the contribution of vascular endothelial growth factor (VEGF) to cerebral edema formation in bacterial meningitis, we used a VEGF neutralizing antibody to block VEGF in rabbits, following induction of meningitis by intracisternal inoculation with 10(9) heat-killed pneumococci. At 8 h, cerebrospinal fluid (CSF) VEGF was significantly elevated in infected untreated animals, and correlated with CSF white blood cell (WBC) count (r=0.56, P=0.004), and brain water content (r=0.42, P=0.04). Blocking of VEGF did not attenuate brain edema, blood-brain barrier disruption, or CSF pleocytosis. The functional role of VEGF in the pathophysiology of BM remains elusive.
- Published
- 2005
- Full Text
- View/download PDF
32. Potent inhibition of neutrophil migration by cryptococcal mannoprotein-4-induced desensitization.
- Author
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Coenjaerts FE, Walenkamp AM, Mwinzi PN, Scharringa J, Dekker HA, van Strijp JA, Cherniak R, and Hoepelman AI
- Subjects
- Antigens, Bacterial blood, CD18 Antigens metabolism, Calcium metabolism, Cells, Cultured, Chemotactic Factors pharmacology, Cryptococcosis blood, Cryptococcus immunology, Dose-Response Relationship, Drug, Drug Antagonism, Humans, L-Selectin metabolism, Macrophage-1 Antigen metabolism, Membrane Glycoproteins blood, Meningitis, Bacterial blood, Neutrophils immunology, Receptors, Immunologic metabolism, Receptors, Tumor Necrosis Factor metabolism, Antigens, Bacterial pharmacology, Chemotaxis, Leukocyte drug effects, Cryptococcus pathogenicity, Membrane Glycoproteins pharmacology, Neutrophils drug effects
- Abstract
Cryptococcal capsular Ags induce the production of proinflammatory cytokines in patients with cryptococcal meningitis. Despite this, their cerebrospinal fluid typically contains few neutrophils. Capsular glucuronoxylomannan is generally considered to mediate the inhibition of neutrophil extravasation. In the current study, culture supernatant harvested from the nonglucuronoxylomannan-producing strain CAP67 was found to be as potent as supernatant from wild-type strains in preventing migration. We identified capsular mannoprotein (MP)-4 as the causative agent. Purified MP-4 inhibited migration of neutrophils toward platelet-activating factor, IL-8, and fMLP, probably via a mechanism involving chemoattractant receptor cross-desensitization, as suggested by its direct chemotactic activity. Supporting this hypothesis, MP-4 elicited Ca(2+) transients that were inhibited by preincubation with either fMLP, IL-8, or C5a, but not platelet-activating factor, and vice versa. Moreover, MP-4 strongly decreased the neutrophil surface expression of L-selectin and induced shedding of TNF receptors p55/p75, whereas CD11b/18 increased. Finally, MP-4 was clearly detectable in both serum and cerebrospinal fluid of patients suffering from cryptococcal meningitis. These findings identify MP-4 as a novel capsular Ag prematurely activating neutrophils and desensitizing them toward a chemoattractant challenge.
- Published
- 2001
- Full Text
- View/download PDF
33. Cryptococcus neoformans and its cell wall components induce similar cytokine profiles in human peripheral blood mononuclear cells despite differences in structure.
- Author
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Walenkamp AM, Chaka WS, Verheul AF, Vaishnav VV, Cherniak R, Coenjaerts FE, and Hoepelman IM
- Subjects
- Blood Donors, Humans, In Vitro Techniques, Membrane Glycoproteins immunology, Membrane Glycoproteins metabolism, Methylation, Cell Wall chemistry, Cell Wall immunology, Cryptococcus neoformans immunology, Cytokines biosynthesis, Leukocytes, Mononuclear immunology
- Abstract
We studied the cytokine profile of peripheral blood mononuclear cells after stimulation with various cryptococcal strains or its purified cell wall components. After 3 h of stimulation, tumor necrosis factor (TNF) alpha levels were strongly increased, whereas interferon (IFN) gamma and interleukin (IL) 10 levels were increased only slightly, or not at all (respectively). In contrast, after 18 h, TNF-alpha and IFN-gamma levels were (strongly) decreased, whereas the IL-10 levels were increased. The IL-1beta, IL-6 and IL-8 levels were equally high throughout the experiment. In order to establish which of the cryptococcal envelope components contributed most to the observed cytokine profile induced by whole cryptococci, glucuronoxylomannan, galactoxylomannan and mannoproteins were purified and partially characterized biochemically. All cryptococcal components elicited a similar cytokine pattern despite the differences in structure.
- Published
- 1999
- Full Text
- View/download PDF
34. Cardiac conduction abnormalities in mice lacking the gap junction protein connexin40.
- Author
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Verheule S, van Batenburg CA, Coenjaerts FE, Kirchhoff S, Willecke K, and Jongsma HJ
- Subjects
- Animals, Electrocardiography, Gap Junctions physiology, Mice, Mice, Knockout, Myocardium ultrastructure, Gap Junction alpha-5 Protein, Connexins physiology, Heart physiology, Heart Conduction System physiopathology
- Abstract
Introduction: The gap junction protein connexin40 (Cx40) normally is expressed in the murine atrial myocardium and ventricular conduction system. In mice lacking Cx40, several changes in the surface ECG have been described. In this study, we analyzed cardiac conduction in more detail., Methods and Results: In open chest mice under urethane anesthesia, epicardial electrodes were used to determine a number of atrial and ventricular pacing parameters. The corrected sinus node recovery time was significantly longer in Cx40-/- mice than in Cx40+/+ mice (44.4 +/- 7.2 msec vs 35.5 +/- 8.0 msec). In addition, the Wenckebach period was longer in Cx40-/- mice compared with the wild type (84.6 +/- 5.4 msec vs 78.8 +/- 3.6 msec), with the AV node probably limiting AV conduction in both cases. Whereas arrhythmias could not be induced by ventricular burst pacing in any of the mice, atrial burst pacing induced atrial tachyarrhythmias in 5 of 10 Cx40-/- mice, but not in any of 9 Cx40+/+ mice. Conduction velocities were measured in vivo using an array of unipolar recording electrodes. Ventricular conduction velocity did not differ between the groups, but atrial conduction velocity was reduced by 30% in Cx40-/- mice compared with the wild type. Heterozygous Cx40+/- mice did not differ significantly from the wild type in any respect., Conclusion: These findings indicate that in the atria and the AV conduction system, Cx40 is an important determinant of conduction.
- Published
- 1999
- Full Text
- View/download PDF
35. Adenovirus DNA replication in a reconstituted system.
- Author
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Coenjaerts FE and van der Vliet PC
- Subjects
- Base Sequence, Centrifugation, Zonal methods, Chromatography, Ion Exchange methods, DNA, Viral chemistry, DNA, Viral isolation & purification, DNA-Binding Proteins analysis, DNA-Binding Proteins isolation & purification, DNA-Directed DNA Polymerase isolation & purification, HeLa Cells, Humans, Kinetics, Models, Structural, Molecular Sequence Data, Phosphoproteins isolation & purification, Phosphoproteins metabolism, Plasmids, Protein Precursors isolation & purification, Protein Precursors metabolism, Repetitive Sequences, Nucleic Acid, Templates, Genetic, Transcription Factors isolation & purification, Viral Proteins analysis, Viral Proteins isolation & purification, Adenoviruses, Human genetics, Adenoviruses, Human metabolism, DNA Replication, DNA, Viral biosynthesis, DNA-Binding Proteins metabolism, DNA-Directed DNA Polymerase metabolism, Replication Origin, Transcription Factors metabolism, Viral Proteins metabolism
- Published
- 1995
- Full Text
- View/download PDF
36. Early dissociation of nuclear factor I from the origin during initiation of adenovirus DNA replication studied by origin immobilization.
- Author
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Coenjaerts FE and van der Vliet PC
- Subjects
- DNA-Directed DNA Polymerase metabolism, Deoxyribonucleotides metabolism, Glutathione, Microspheres, Models, Genetic, NFI Transcription Factors, Nuclear Proteins, Recombinant Fusion Proteins biosynthesis, Recombinant Fusion Proteins metabolism, Sepharose, Templates, Genetic, Y-Box-Binding Protein 1, Adenoviridae physiology, CCAAT-Enhancer-Binding Proteins, DNA Replication physiology, DNA, Viral metabolism, DNA-Binding Proteins metabolism, Replication Origin, Transcription Factors, Virus Replication physiology
- Abstract
The DNA-binding domain of Nuclear Factor I (NFIBD) enhances initiation of adenovirus DNA replication up to 50-fold by binding to the auxiliary region of the origin and positioning the viral DNA polymerase. To study if and when NFIBD dissociates from the template, we immobilized origin DNA to glutathione-agarose beads by means of a GST-NFIBD fusion protein. This immobilized template is active in replication. By analyzing the release of prelabeled templates from the beads under different conditions, we show that NFIBD dissociates already early during initiation. During preinitiation NFIBD remains bound, but as soon as dCTP, dATP or dTTP are added, efficient dissociation occurs. A much lower dissociation level was induced by addition of dGTP. Since dCTP, dATP and dTTP are required for formation of a pTP-CAT initiation intermediate, we explain our results by conformational changes occurring in the polymerase during initiation leading to disruption of both the interaction between the polymerase and NFI as well as the interaction between NFI and the DNA.
- Published
- 1994
- Full Text
- View/download PDF
37. The Oct-1 POU domain stimulates adenovirus DNA replication by a direct interaction between the viral precursor terminal protein-DNA polymerase complex and the POU homeodomain.
- Author
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Coenjaerts FE, van Oosterhout JA, and van der Vliet PC
- Subjects
- Adenoviridae genetics, Animals, Base Sequence, DNA, Viral genetics, DNA-Binding Proteins chemistry, Herpes Simplex Virus Protein Vmw65 metabolism, Host Cell Factor C1, Macromolecular Substances, Models, Molecular, Molecular Sequence Data, NFI Transcription Factors, Octamer Transcription Factor-1, Peptide Fragments pharmacology, Point Mutation, Protein Binding, Rats, Recombinant Fusion Proteins metabolism, Simplexvirus metabolism, Transcription Factors chemistry, Adenoviridae physiology, DNA Replication drug effects, DNA, Viral metabolism, DNA-Binding Proteins metabolism, DNA-Directed DNA Polymerase metabolism, Protein Structure, Tertiary, Transcription Factors metabolism, Viral Proteins metabolism, Virus Replication drug effects
- Abstract
The bipartite POU domain of transcription factor Oct-1 stimulates adenovirus DNA replication through an interaction with the octamer sequence present in the auxiliary origin. Employing an immobilized in vitro DNA replication system, we show that the POU domain enhances the formation of a pre-initiation complex composed of the viral precursor terminal protein-DNA polymerase (pTP-pol) complex and the origin. To investigate the mechanism of stimulation we have explored protein-protein interactions between the POU domain and the pTP-pol complex. Such an interaction could be detected using a GST-POU fusion protein bound to glutathione-agarose beads. Binding was also observed with the POU homeodomain (POUHD), albeit weaker than with the intact POU domain, but not with the POU specific subdomain. Four point mutations localized in the POUHD were analyzed for pTP-pol binding. Two of these, E22A and E30A, bound pTP-pol equally as well as the wild-type, while the other two, Q24A and E29A, were able to bind 2- to 4-fold better. These mutations are localized in the same region where the HSV transactivator VP16 binds, but did not coincide with the VP16 contacts. A direct correlation between pTP-pol binding and stimulation of DNA replication in vitro was observed for all mutants, suggesting that stimulation by the POU domain is caused by an interaction with the viral pTP-pol complex.
- Published
- 1994
- Full Text
- View/download PDF
38. Crystal structure of the adenovirus DNA binding protein reveals a hook-on model for cooperative DNA binding.
- Author
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Tucker PA, Tsernoglou D, Tucker AD, Coenjaerts FE, Leenders H, and van der Vliet PC
- Subjects
- Adenovirus E2 Proteins genetics, Adenovirus E2 Proteins metabolism, Amino Acid Sequence, Base Sequence, Binding Sites, Crystallography, X-Ray, Models, Molecular, Molecular Sequence Data, Protein Conformation, Protein Folding, Recombinant Fusion Proteins biosynthesis, Recombinant Fusion Proteins metabolism, Sequence Deletion, Zinc, Adenoviridae chemistry, Adenovirus E2 Proteins chemistry, DNA, Viral metabolism
- Abstract
The adenovirus single-stranded DNA binding protein (Ad DBP) is a multifunctional protein required, amongst other things, for DNA replication and transcription control. It binds to single- and double-stranded DNA, as well as to RNA, in a sequence-independent manner. Like other single-stranded DNA binding proteins, it binds ssDNA, cooperatively. We report the crystal structure, at 2.6 A resolution, of the nucleic acid binding domain. This domain is active in DNA replication. The protein contains two zinc atoms in different, novel coordinations. The zinc atoms appear to be required for the stability of the protein fold rather than being involved in direct contacts with the DNA. The crystal structure shows that the protein contains a 17 amino acid C-terminal extension which hooks onto a second molecule, thereby forming a protein chain. Deletion of this C-terminal arm reduces cooperativity in DNA binding, suggesting a hook-on model for cooperativity. Based on this structural work and mutant studies, we propose that DBP forms a protein core around which the single-stranded DNA winds.
- Published
- 1994
- Full Text
- View/download PDF
39. Enhancement of DNA replication by transcription factors NFI and NFIII/Oct-1 depends critically on the positions of their binding sites in the adenovirus origin of replication.
- Author
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Coenjaerts FE, De Vries E, Pruijn GJ, Van Driel W, Bloemers SM, Van der Lugt NM, and Van der Vliet PC
- Subjects
- Base Sequence, Binding Sites, Cell-Free System, DNA Mutational Analysis, DNA, Viral genetics, Host Cell Factor C1, Models, Biological, Molecular Sequence Data, Octamer Transcription Factor-1, Adenoviridae genetics, DNA Replication physiology, DNA-Binding Proteins metabolism, Transcription Factors metabolism
- Abstract
The origin of DNA replication of many human adenoviruses is composed of a highly conserved core origin and an auxiliary region, containing the binding sites for NFI and NFIII/Oct-1. We examined enhancement of DNA replication in vitro by the purified functional DNA-binding domains of NFI (NFI-BD) and NFIII/Oct-1 (the POU domain), using origins in which the positions of the binding sites for these proteins were transposed. Insertion or deletion of two or three base pairs between the core origin and the NFI binding site resulted in a 3-5-fold decrease of stimulation, whereas larger insertions gradually reduced the stimulation further. Mutants in which the NFI binding site was separated approximately one or two helical turns from the core origin by AT-rich sequences could still be stimulated by NFI. In contrast, insertion of two or more base pairs between the NFI and NFIII/Oct-1 binding sites abolished stimulation by NFIII/Oct-1 almost completely. Furthermore, stimulation by this protein was lost when the Ad2 NFIII/Oct-1 binding site was transposed to a position closer to the core origin, destroying the NFI binding site. This shows that the position of the NFIII/Oct-1 binding site is essential for stimulation. Models to explain these position-dependent effects on stimulation are discussed.
- Published
- 1991
- Full Text
- View/download PDF
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