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Tropomyosin receptor kinases (Trks) are transmembrane receptor tyrosine kinases named TrkA, TrkB, and TrkC and encoded by the NTRK1, NTRK2, and NTRK3 genes, respectively. These kinases have attracted significant attention and represent a promising therapeutic target for solid tumor treatment due to their vital role in cellular signaling pathways. First-generation TRK inhibitors, i.e., Larotrectinib sulfate and Entrectinib, received clinical approval in 2018 and 2019, respectively. However, the use of these inhibitors was significantly limited because of the development of resistance due to mutations. Fortunately, the second-generation Trk inhibitor Repotrectinib (TPX-0005) was approved by the FDA in November 2023, while Selitrectinib (Loxo-195) has provided an effective solution to this issue. Another macrocycle-based analog, along with many other TRK inhibitors, is currently in clinical trials. Two of the three marketed drugs for NTRK fusion cancers feature a pyrazolo[1,5- a ] pyrimidine nucleus, prompting medicinal chemists to develop numerous novel pyrazolopyrimidine-based molecules to enhance clinical applications. This article focuses on a comprehensive review of chronological synthetic developments and the structure-activity relationships (SAR) of pyrazolo[1,5- a ]pyrimidine derivatives as Trk inhibitors. This article will also provide comprehensive knowledge and future directions to the researchers working in the field of medicinal chemistry by facilitating the structural modification of pyrazolo [1,5- a ]pyrimidine derivatives to synthesize more effective novel chemotherapeutics as TRK inhibitors.

Due to their extended p-orbital delocalization, conjugated polymers absorb light in the range of visible-NIR frequencies. We attempt to exploit this property to create materials that compete with inorganic semiconductors in photovoltaic and light-emitting materials. Beyond competing for applications in photonic devices, organic conjugated compounds, polymers, and small molecules have also been extended to biomedical applications like phototherapy and biodetection. Recent research on conjugated polymers has focused on bioapplications based on the absorbed light energy conversions in electric impulses, chemical energy, heat, and light emission. In this review, we describe the working principles of those photonic devices that have been applied and researched in the field of biomaterials.

N 2 dissociative adsorption is commonly the rate-determining step in thermal ammonia synthesis. Herein, we performed density functional theory (DFT) calculations to understand the N 2 dissociation mechanism on models of unsupported Ru(0001) terraces, Ru B5 sites, and polar MgO(111)-supported Ru 8 cluster mimicking a B5 site geometry, denoted (Ru 8 (B5-like)/MgO(111)). The activation energy of N 2 dissociative adsorption on the Ru 8 (B5-like)/MgO(111) model ( E a = 0.33 eV) is much lower than that on the unsupported Ru(0001) terrace ( E a = 1.74 eV) and Ru B5 ( E a = 0.62 eV) models. The lower N 2 dissociation barrier on Ru B5 sites is facilitated by the enhanced σ donation and π* back-donation between N 2 (σ, π*) and Ru(d) orbitals resulting in the stronger activation of the molecular side-on N 2 * dissociation precursor. The Ru 8 (B5-like)/MgO(111) also exhibits enhanced σ donation because of the B5-like cluster geometry. Furthermore, the Ru cluster of the bare Ru 8 (B5-like)/MgO(111) model is positively charged. This induced an unusual π donation from N 2 (π) to Ru(d) orbitals as revealed by analyses of the density of states and partial charge densities. The combined σ and π donation resulted in an increased synergistic π* back-donation. The total interactions between N 2 (σ, π, π*) and Ru(d) resulted in an overall electron transfer to the adsorbed N 2 from the Ru atoms in the B5-like site with no direct involvement of the MgO(111) substrate. Analyses of bond stretching vibrations and bond lengths show that the N 2 (σ, π, π*) and Ru(d) interactions lead to a weaker N-N bond and stronger Ru-N bonds. These correspond to a lower barrier of N 2 dissociation on the Ru 8 (B5-like)/MgO(111) model, where the highest red-shift of N-N vibration and the longest N-N bond length were observed after side-on N 2 * adsorption. These results demonstrate that an electron-deficient Ru catalyst are not always inhibited from donating electrons to adsorbed N 2 . Rather, this study shows that the electron deficiency of Ru can promote π* back-donation and N 2 activation. These new insights may therefore open new avenues to design supported Ru catalysts for nitrogen activation.

Leishmaniasis is a neglected tropical disease, and there is an emerging need for the development of effective drugs to treat it. To identify novel compounds with antileishmanial properties, a novel series of functionalized spiro[indoline-3,2'-pyrrolidin]-2-one/spiro[indoline-3,3'-pyrrolizin]-2-one 23a - f , 24a - f , and 25a - g were prepared from natural-product-inspired pharmaceutically privileged bioactive sub-structures, i.e., isatins 20a - h , various substituted chalcones 21a - f , and 22a - c amino acids, via 1,3-dipolar cycloaddition reactions in MeOH at 80 °C using a microwave-assisted approach. Compared to traditional methods, microwave-assisted synthesis produces higher yields and better quality, and it takes less time. We report here the in vitro antileishmanial activity against Leishmania donovani and SAR studies. The analogues 24a , 24e , 24f , and 25d were found to be the most active compounds of the series and showed IC 50 values of 2.43 µM, 0.96 µM, 1.62 µM, and 3.55 µM, respectively, compared to the standard reference drug Amphotericin B (IC 50 = 0.060 µM). All compounds were assessed for Leishmania DNA topoisomerase type IB inhibition activity using the standard drug Camptothecin, and 24a , 24e , 24f , and 25d showed potential results. In order to further validate the experimental results and gain a deeper understanding of the binding manner of such compounds, molecular docking studies were also performed. The stereochemistry of the novel functionalized spirooxindole derivatives was confirmed by single-crystal X-ray crystallography studies.

In this study, a full organic and water-soluble material was synthesized by coupling low molecular weight polyethylenimine (PEI-800) with cyclotriveratrilene (CTV). The water-soluble cross-linked polymer contains hydrophobic holes with a high coordination capability towards different organic drug molecules. The coordinating capability towards hydrophilic drugs (doxorubicin, gatifloxacin and sinomenine) and hydrophobic drugs (camptothecin and celastrol) was analyzed in an aqueous medium by using NMR, UV-Vis and emission spectroscopies. The coordination of drug molecules with the armed CTV unit through hydrophobic interactions was observed. In particular, celastrol exhibited more ionic interactions with the PEI moiety of the hosting system. In the case of doxorubicin, the host-guest detachment was induced by the addition of ammonium chloride, suggesting that the intracellular environment can facilitate the release of the drug molecules.

In this paper, a modified Cyclotriveratrylene was synthesized and linked to a branched Polyethylenimine, and this unique polymeric material was subsequently examined as a potential supramolecular carrier for Doxorubicin. Spectroscopic analysis in different solvents had shown that Doxorubicin was coordinated within the hollow-shaped unit of the armed Cyclotriveratrylene, and the nature of the host-guest complex revealed intrinsic Van der Waals interactions and hydrogen bonding between the host and guest. The strongest interaction was detected in water because of the hydrophobic effect shared between the aromatic groups of the Doxorubicin and Cyclotriveratrylene unit. Density functional theory calculations had also confirmed that in the most stable coordination of Doxorubicin with the cross-linked polymer, the aromatic rings of the Doxorubicin were localized toward the Cyclotriveratrylene core, while its aliphatic chains aligned closer with amino groups, thus forming a compact supramolecular assembly that may confer a shielding effect on Doxorubicin. These observations had emphasized the importance of supramolecular considerations when designing a novel drug delivery platform.

In this report, the substitution of the oxygen group (=O) of Tetraphenylcyclopentadienone with =CR 2 group (R = methyl ester or nitrile) was found to have tuned the electro-optical properties of the molecule. Although both groups are electrons withdrawing in nature, their absorption from UV-vis spectra analysis was observed to have been blue-shifted by methyl ester substitution and red-shifted by nitrile substitution. Interestingly, these substitutions helped to enhance the overall intensity of emission, especially in the context of methyl ester substitution whereby the emission was significantly boosted at higher concentrations due to hypothesized restrictions of intramolecular motions. These observations were explained through detailed descriptions of the electron withdrawing capability and steric properties of the substituents on the basis of density functional theory calculations.

This work reports the outcome of thermal grafting of 2-ethynylaniline, 3-ethynylaniline, and 4-ethynylaniline on a hydrogenated Si(100) surface. Using high-resolution XPS and AFM, it was found that the grafting of these compounds could be attributed to resonating structures that arise from the position of an electron-donating NH 2 group and an electron-withdrawing acetylene group. For the ortho- and para-positioned acetylene group, surface reactions were observed to proceed predominantly via the acetylene to form a Si-C bond, whereas the meta-positioned acetylene group was found to have undergone nucleophilic grafting through the NH 2 group onto the silicon surface to form a Si-N bond. Furthermore, a tert-butoxycarbonyl-protected derivative for a meta-positioned ethynylaniline was synthesized to exclusively force the reaction to react with the acetylene group and subsequent analysis confirmed that unprotected 3-ethynylaniline had indeed reacted through the nucleophilic NH 2 group as hypothesized. Thus, for the first time, the interplay between resonance structures and their effects on silicon surface modifications were systematically catalogued., (© 2018 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.)

Chirality is a powerful tool for the generation of order, directionality, and, as such, of function, in assembled nanoscale chemical devices. Axially chiral binaphthyls have been widely used in organic synthesis; the stability of the enantiomers enables their use as robust chirality inducers and catalysts in asymmetric reactions, and they are nowadays industrially applied in a variety of organic transformations. Applications of these compounds in the field of nanosciences are more recent, and not yet fully explored. The integration of such a robust class of chiral compounds, capable of efficient transfer of stereochemical information, into functional aggregates and nanoarchitectures is of great current interest. We will discuss preeminent examples of applications of these synthons in several fields of nanoscience, such as reticular chemistry, non-linear optical materials and imaging, and liquid crystals.

We report on a series of novel homologous push-pull compounds, in which identical donor (a dimethylamino) and acceptor (a malonate ester) functionalities endcap crescent PPV fragments, bearing, respectively, 1, 2 and 3 p-phenylenevinylene units in direct linear conjugation (compounds 7-9). The three compounds exhibit striking differences in their linear and nonlinear optical properties. The shorter compound 7 exhibits aggregation-induced emission with a strong luminescence in the solid state (blue emission, photoluminescence quantum yield 38%), and it is nonemissive in solution; the more extended conjugated systems 8 and 9 show classical aggregation-caused quenching in the solid state, while high quantum yield photoluminescence (21 and 93% in toluene) is restored in diluted solutions, through mechanisms involving intramolecular charge transfer in the excited states. EFISH measurements in solutions demonstrate a strong solvent and concentration dependence. As rationalized with the aid of molecular modelling, compounds 8 and, more markedly, 9 aggregate in stable centrosymmetric dimers in solution.

A chiral ditopic polyammonium receptor featuring two [9]aneN(3) moieties separated by a (S)-BINOL linker is able to selectively bind and sense in water (S,S)-tartaric acid over its (R,R)/meso forms.

The first examples of thiocyanate-free thiophene-substituted Ru(II) cyclometalated complexes, based on thiophene-derived 2-(2,4-difluorophenyl)pyridine ligands, are presented and investigated as photosensitizers in DSCs. Upon thiophene substitution the complexes presented enhanced optical properties compared to the reference dye with no thiophene substitution. DSCs based on the dithienyl-derived dye showed power conversion efficiencies up to 5.7%, more than twice that containing the complex without the thiophene substitution.

A new general synthetic access to carboxylated quaterpyridines (qpy), of interest as ligands for panchromatic dye-sensitized solar cell organometallic sensitizers, is presented. The strategic step is a Suzuki-Miyaura cross-coupling reaction, which has allowed the preparation of a number of representative unsubstituted and alkyl and (hetero)aromatic substituted qpys. To bypass the poor inherent stability of 2-pyridylboronic acid derivatives, we successfully applied N-methyliminodiacetic acid (MIDA) boronates as key reagents, obtaining the qpy ligands in good yields up to (quasi)gram quantities. The structural, spectroscopic (NMR and UV-vis), electrochemical, and electronic characteristics of the qpy have been experimentally and computationally (DFT) investigated. The easy access to the bis-thiocyanato Ru(II) complex of the parent species of the qpy series, through an efficient route which bypasses the use of Sephadex column chromatography, is shown. The bis-thiocyanato Ru(II) complex has been spectroscopically (NMR and UV-vis), electrochemically, and computationally investigated, relating its properties to those of previously reported Ru(II)-qpy complexes.

In this study, we report the synthesis and characterization of three novel "push-pull" chromophores, in which multiple phenylenevinylene units are endcapped by ferrocene as donor units and malonate moieties as acceptor units. These chromophores have spectroscopic and electrochemical characteristics which consistently change according to the extension of the conjugated bridge, thus to the variation of the HOMO-LUMO band gap. The 1,3-dicarbonyl units, directly incorporated into the conjugated molecular structures, are able to coordinate Lewis acid-like cations, such as lanthanides, as confirmed by UV/Vis, (1)H NMR and cyclic voltammetry studies. The UV/Vis spectroscopic response upon complexation with Sc(3+) or Eu(3+) as the triflate salts is rather unselective and nonlinear in going from the least to the most π-extended chromophore. Binding studies in MeCN, analyzed via equilibrium-restricted factor analysis, give values between log K(a) = 1.21 and 3.07 and affirm a 1 : 1 stoichiometry of the host:guest complexes in all cases. On the other hand, cyclic voltammetry reveals a selectivity in the response to Sc(3+) coordination over Ln(3+) (Eu(3+), but also Lu(3+) and Er(3+) were tested) for the two shorter chromophores, whereas the ligand with the longest π-bridge is able to sense Er(3+) (ΔE(1/2) complexed/uncomplexed chromophore = 20 mV) selectively over the other lanthanides.

A series of four chiral D(2) symmetrical macrocycles, in which two 3,3'-disubstituted Binol units are bridged by conjugated organic spacers of differing lengths and/or electronic properties, have been synthesized and characterized. The four different bridges consist of either ether or ester linkages in combination with either short biphenyl spacers or long diethynylphenyl spacers. NMR, CD spectroscopy, and molecular modeling help rationalize the shape of the cyclic scaffolds and even subtle modifications in the bridging units lead to drastic changes in conformation. The three macrocycles with longer bridging units and/or ester linkages form stable 1 : 1 complexes with C(60) in toluene. The one with a short spacer and ether linkage does not. The binding constants have been determined with a high degree of accuracy via equilibrium-restricted factor analysis; with long spacers and ester linkages log K(a) = 4.37(2); with short spacers and ester linkages log K(a) = 3.498(4); with long spacers and ether linkages log K(a) = 3.509(2).

A series of tetraamidic homochiral macrocycles have been built convergently upon the introduction in the covalent scaffold of two 1,1'-binaphthyl-2,2'-diol derivatives, joined by aromatic spacers of differing shapes and rigidity (p-phenyl, 4,4'-biphenyl, 3,3'-biphenyl) through aromatic amide functionalities, perfectly positioned to intramolecularly hydrogen bond the naphtholic oxygen acceptors of the binaphthyl units, in order to effectively lock the central chromophores in spatial proximity. The combination of several techniques, namely NMR and CD spectroscopies, and computational modeling, allows for a clear depiction of the structure and conformation of the macrocycles in solution. In the case of the shape "unstable" 3,3'-biphenyl spacer, the preferred conformation of a "wrapped" form in a relatively polar (EtOH) solvent is clearly signalled by CD spectroscopy by analyzing the changes in the shape of the induced CD signal deriving from the central, achiral chromophore absorption band. The rigid, covalent scaffold in which the two central 3,3'-biphenyl spacers are embedded raises the energetic barrier for the rotation around the aryl-aryl bonds of the spacers to a value (8.0 kcal mol(-1)) much higher than the value calculated in the case of unlocked biphenyls.

The reactivity of aromatic dicarboxylic acids, in combination with an axially-chiral, suitable dibenzylic alcohol, derived from BINOL, has been exploited in one-pot esterification reactions for the direct formation of several rigid, homochiral macrocycles. Cyclic adducts possessing, respectively, average molecular D(2) and D(3) symmetries, have been characterized in pure forms, with isolated yields and selectivities which are substantially different from those rising from purely statistical arguments. NMR and CD spectroscopies detect the structural and shape variability in the scaffolds, reflected both in terms of large changes in chemical shifts of selected proton resonances, and in terms of the variation of the CD signature related to the dihedral angle defined by the binaphthyl units embedded in the rigid cyclic skeleton. The crystal structure of two homochiral D(2) macrocycles show the formation of ordered nanostructures in the solid state, with the naphthyl rings of the binaphthyl units packing intermolecularly in an eclipsed-like conformation to yield nonhelical tubular arrangements. The larger D(3) cyclic adducts are able to afford stable complexes with C(60) in toluene solution, with comparable binding strengths, yet whose stoichiometries are dependent on small variations in the spacing units and therefore in the shapes of the internal cavities of the cyclic structures.

An efficient chemoselective differentiation of vicinal phenolic and benzylic alcohols on optically active binaphthyl skeletons has been achieved via TBS protection of the less sterically hindered, external 3,3' benzylic positions. Further manipulation of functionalities either in the 2,2' or 3,3' positions is then easily achieved in high yields via the use of BOC protecting groups, functioning orthogonally to TBS.

The synthesis and characterization of the new chiral ligand 2, based on a BINOL-tren (tren = tris(2-aminoethyl)amine) conjugate, in enantiomerically pure form, are reported. UV-Vis spectrophotometric and spectrofluorimetric studies at variable pH show that the incorporation of a phenolic functionality in close proximity to the polyamino fragment of the molecule causes a dramatic variation of the acid-base and coordination properties of the molecule; the major role of this functionality in determining the selectivity observed in the complexation of Cu(2+), when compared with Zn(2+) and Ni(2+), at pH = 5 in aqueous MeOH, has been clarified, also by comparison with the spectroscopic and coordination properties of model compound 3, bearing protected OMe functionalities. The peculiar absorbance, emission and chiroptical properties of the binaphthyl fragment incorporated in compound 2 can be used for the selective detection of Cu(2+) using three different and potentially orthogonal techniques, namely UV, CD and fluorescence spectroscopies.

The ring inversion barrier for thianthrene tetraoxide was determined by making use of the variable temperature 13C NMR spectra of the 2,7-diisopropyl derivative (DeltaG(double dagger) = 6.5 kcal mol(-1)). The barrier is lower than that measured for a trans thianthrene dioxide derivative (DeltaG(double dagger) = 9.35 kcal mol(-1)). These results agree well with ab initio theoretical predictions.

Low-temperature and NOE NMR spectra of four of the title compounds indicate that they adopt a synclinal (sc) conformation, in agreement with the prediction of ab initio computations. In the case of the most-hindered derivative (compound 4), the conformation is syn-periplanar (sp), as is also shown by X-ray diffraction. Such stereolabile sp- or sc-atropisomers exist as two conformational enantiomers: the corresponding enantiomerization barriers, covering the range 6.6 to 9.7 kcal mol(-1), could be measured for all the examined compounds. In two cases (compounds 3 and 5), the minor antiperiplanar (ap) atropisomer has been also observed, and the sc to ap interconversion barrier measured (11.7 and 11.9 kcal mol(-1), respectively). In addition, restricted rotation of the isopropyl and tert-butyl substituents has been detected, and the corresponding barriers have been determined.

Carbinols of the Ar-C(OH)R(2) type, Ar being o-isopropylphenyl, exist as stereolabile syn-clinal (sc) and anti-periplanar (ap) atropisomers when R = Me, Et, i-Pr. In the latter compound, the major atropisomer also comprises two enantiomeric forms that interchange with a barrier of 6.4 kcal mol(-1). X-ray diffraction, NOE experiments, and ab initio calculations indicate that the sc-atropisomer is the more stable form when R = Me, i-Pr, t-Bu but is the less stable one when R = Et. NMR spectra at variable temperature allowed the determination of the barriers for the interconversion of the sc- into the ap-atropisomers (DeltaG++ = 7.6, 8.8, and 13.5 kcal mol(-1) for Me, Et, i-Pr, respectively). When R is a tert-butyl group, the two atropisomers are configurationally stable: the ap-atropisomer is obtained as the kinetic controlled compound, which can be transformed into the thermodynamically more stable sc-atropisomer with a free energy of activation of 29.3 kcal mol(-1). Both atropisomers exhibit restricted rotation of the tert-butyl moiety, the corresponding DeltaG++ values being 9.4 and 8.8 kcal mol(-1) for the sc- and ap-atropisomer, respectively.

The barriers for interconverting the conformational enantiomers (stereolabile atropisomers) of pyridine-substituted adamantane derivatives have been determined by dynamic 13C NMR spectroscopy. The trend of these values parallels that anticipated by MM calculations. In at least one case, the computed structure was found to agree with that obtained by single-crystal X-ray diffraction. In addition, it has been possible to achieve a physical separation of a pair of these stereolabile atropisomers at -60 degrees C by means of the enantioselective cryogenic HPLC technique., (Copyright 2004 American Chemical Society)

The low-temperature NMR spectra of 1,4-bis(mesitoyl)durene, 1, and of 1,4-bis(mesitylethenyl)durene, 2, reveal the presence of syn and anti rotamers at the equilibrium, their relative proportions depending on the dielectric constant of the solvent. In solution the more stable rotamer of 1 is the anti whereas, in the case of 2, the more stable is the syn. Depending on the crystallization solvent employed the more (anti) and the less stable (syn) rotamers were both observed (X-ray diffraction) in the solid state of 1. On the other hand, only the less stable rotamer (anti) was found to be present in the solid state of 2. As shown by MM calculations, the syn-to-anti interconversion occurs via a correlated process (cogwheel pathway) involving the mesityl-C and durene-C bond rotations: the dynamic NMR technique yields an experimental barrier of 8.2 kcal mol(-)(1) for 1 and 13.1 kcal mol(-)(1) for 2. In the case of derivative 2 a second barrier, due to a second type of correlated rotation process (torsion), was also determined (8.6 kcal mol(-)(1)). As a consequence of the restriction of this second torsional motion the anti rotamer of 2 displays two distinguishable NMR spectra at -133 degrees C, corresponding to a pair of conformers with different symmetry (anti C(i)() and anti C(2)).