15 results on '"Cook E Jr"'
Search Results
2. The Werner's syndrome 4330T>C (Cys1367Arg) gene variant does not affect the in vitro cytotoxicity of topoisomerase inhibitors and platinum compounds.
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Innocenti F, Mirkov S, Nagasubramanian R, Ramírez J, Liu W, Bleibel WK, Shukla SJ, Hennessy K, Rosner GL, Cook E Jr, Eileen Dolan M, Ratain MJ, Innocenti, Federico, Mirkov, Snezana, Nagasubramanian, Ramamoorthy, Ramírez, Jacqueline, Liu, Wanqing, Bleibel, Wasim K, Shukla, Sunita J, and Hennessy, Kathleen
- Abstract
Purpose: Werner's syndrome (WS) is a recessive disorder of premature onset of processes associated with aging. Defective DNA repair has been reported after exposure of cells isolated from WS patients to DNA-damaging agents. The germline 4330T>C (Cys1367Arg) variant in the WS gene (WRN) has been associated with protection from age-related diseases, suggesting it has a functional role. We studied whether the 4330T>C variant confers altered drug sensitivity in vitro.Methods: 4330T>C was genotyped in 372 human lymphoblastoid cell lines (LCLs) from unrelated healthy Caucasian individuals using a TaqMan-based method. The study was powered to detect the effect of the 4330T>C genotypes after exposure to camptothecin (based upon preliminary data). The effect of the 4330T>C variant on the cytotoxicity of etoposide, carboplatin, cisplatin and daunorubicin was also tested. WRN expression in 57 LCLs was measured by microarray.Results: No significant difference between the IC50 of the cells was observed among genotypes (P = 0.46) after exposure to camptothecin. No association was also observed for etoposide, carboplatin, cisplatin, and daunorubicin (ANOVA, P > 0.05). WRN expression also did not vary across genotypes (ANOVA, P = 0.37).Conclusion: These results suggest that this nonsynonymous variant has relatively normal function at the cellular level. [ABSTRACT FROM AUTHOR]- Published
- 2009
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3. Summary of the Practice Parameters for the Assessment and Treatment of Children, Adolescents, and Adults with Autism and other Pervasive Developmental Disorders. American Academy of Child and Adolescent Psychiatry.
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Volkmar, F, Cook, E Jr, Pomeroy, J, Realmuto, G, and Tanguay, P
- Abstract
This summary provides an overview of the assessment and treatment recommendations contained in the Practice Parameters for the Assessment and Treatment of Children, Adolescents, and Adults With Autism and Other Pervasive Developmental Disorders. The parameters were written to aid clinicians in the assessment and treatment of children and adolescents with autism and other pervasive developmental disorders. Autism and the related pervasive developmental disorders are characterized by patterns of delay and deviance in the development of social, communicative, and cognitive skills, which arise in the first years of life. Although frequently associated with mental retardation, these conditions are distinctive in terms of their course and treatment. These conditions have a wide range of syndrome expression, and their management presents particular challenges for clinicians. Individuals with these conditions can present for clinical care at any point in development. The multiple developmental and behavioral problems associated with these conditions often require the care of multiple providers; coordination of services and advocacy for individuals and their families is important. Early, sustained intervention is indicated, as is the use of various treatment modalities (e.g., pharmacotherapy, special education, speech/communication therapy, and behavior modification. [ABSTRACT FROM AUTHOR]
- Published
- 1999
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4. Asperger syndrome associated with Steinert's myotonic dystrophy.
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Blondis, Thomas A, Cook, Edwin, Koza-Taylor, Petra, Finn, Terry, Blondis, T A, Cook, E Jr, Koza-Taylor, P, and Finn, T
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- 1996
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5. Vocabulary comprehension in adults with fragile X syndrome (FXS).
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Hoffmann A, Krause SE, Wuu J, Leurgans S, Guter SJ Jr, Block SS, Salt J, Cook E Jr, Maino DM, and Berry-Kravis E
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- Adolescent, Adult, Female, Humans, Male, Middle Aged, Randomized Controlled Trials as Topic, Young Adult, Comprehension physiology, Fragile X Syndrome physiopathology, Language, Language Tests standards, Vocabulary
- Abstract
Background: Receptive and expressive vocabulary in adult and adolescent males with fragile X syndrome (FXS) have been shown as significantly lower than their chronological age; however, receptive vocabulary has been considered a strength relative to mental age. This has not been formally examined, however, and data are needed to compare receptive vocabulary with other language skills and with mental age in individuals with FXS. This is especially important as vocabulary measures are sometimes used as a proxy to estimate language ability., Methods: This preliminary study examined receptive vocabulary, global language, and cognitive skills in 42 adults (33 males and 9 females) with FXS as a portion of the baseline evaluation prior to randomization in a clinical trial of ampakine CX516. The battery of standardized tests addressed receptive vocabulary with the Peabody Picture Vocabulary Test, Third Edition (PPVT-III), receptive and expressive language (termed henceforth as global language) via the Preschool Language Scale, Fourth Edition or the Clinical Evaluation of Language Fundamentals, Third Edition, and non-verbal cognition via the Stanford-Binet Intelligence Scales, Fourth Edition (SB-IV)., Results: Results showed (1) significantly higher receptive vocabulary than global language, (2) significantly better receptive vocabulary than non-verbal cognition, (3) equivalent non-verbal cognition and global language, and (4) severity of autism symptomatology was not correlated to receptive vocabulary or global language once non-verbal cognition was removed as factor. The scores from the PPVT-III did not represent the global language skills in our sample of adults with FXS., Conclusions: Findings from this investigation strongly suggest that the PPVT-III should not be used as a screening tool for language levels or cognitive function in clinical studies since the scores from the PPVT-III were not representative of global language or non-verbal cognitive skills in adults with intellectual disabilities. This finding is critical in order to understand how to evaluate, as well as to treat, language in individuals with FXS. Development of efficient and appropriate tools to measure language, cognition, and behavior in individuals with FXS is essential.
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- 2019
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6. Does MAOA increase susceptibility to prenatal stress in young children?
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Massey SH, Hatcher AE, Clark CAC, Burns JL, Pine DS, Skol AD, Mroczek DK, Espy KA, Goldman D, Cook E Jr, and Wakschlag LS
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- Adolescent, Adult, Child, Child, Preschool, Female, Gene-Environment Interaction, Genetic Predisposition to Disease, Humans, Male, Pregnancy, Prospective Studies, Sex Characteristics, Tobacco Smoking adverse effects, Young Adult, Monoamine Oxidase adverse effects, Prenatal Exposure Delayed Effects genetics, Problem Behavior, Stress, Psychological genetics
- Abstract
Background: We previously demonstrated a gene-by-prenatal-environment interaction whereby the monoamine oxidase A gene (MAOA) modified the impact of prenatal tobacco exposure (PTE) on adolescent disruptive behavior (DB), with the MAOA risk genotype varying by sex. We extend this work by examining whether this mechanism is evident with another common adversity, prenatal stress exposure (PSE), and whether sex differences are present earlier in development in closer proximity to exposure., Methods: Participants were 281 mothers and their 285 children derived from a prenatal cohort with in-depth prospective measures of PSE and PTE. We assessed DB at age 5 via dimensional developmentally-sensitive measurement. Analyses were stratified by sex based on prior evidence for sex differences., Results: Concurrent stress exposure predicted DB in children (β=0.310, p=0.001), while main effects of prenatal exposures were seen only in boys. We found a three-way interaction of MAOA×PSE×sex on DB (β=0.813, p=0.022). Boys with MAOA-H had more DB as a function of PSE, controlling for PTE (β=0.774, p=0.015), and as a function of PTE, controlling for PSE (β=0.362, p=0.037). Boys with MAOA-L did not show this susceptibility. MAOA did not interact with PSE (β=-0.133, p=0.561) nor PTE (β=-0.144; p=0.505) in predicting DB in girls. Examination of gene-environment correlation (rGE) showed a correlation between paternal MAOA-L and daughters' concurrent stress exposure (r=-0.240, p=0.013)., Discussion: Findings underscore complex mechanisms linking genetic susceptibility and early adverse exposures. Replication in larger cohorts followed from the pregnancy through adolescence is suggested to elucidate mechanisms that appear to have varying developmental expression., (Copyright © 2017 Elsevier Inc. All rights reserved.)
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- 2017
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7. Genetic factors affecting gene transcription and catalytic activity of UDP-glucuronosyltransferases in human liver.
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Liu W, Ramírez J, Gamazon ER, Mirkov S, Chen P, Wu K, Sun C, Cox NJ, Cook E Jr, Das S, and Ratain MJ
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- DNA Copy Number Variations, Genetic Variation, Humans, Peroxisome-Targeting Signal 1 Receptor, Polymorphism, Single Nucleotide, Receptors, Cytoplasmic and Nuclear genetics, Transcription Factors genetics, Gene Expression Regulation, Glucuronosyltransferase genetics, Glucuronosyltransferase metabolism, Liver enzymology, Transcription, Genetic
- Abstract
The aim of this study was to discover cis- and trans-acting factors significantly affecting mRNA expression and catalytic activity of human hepatic UDP-glucuronosyltransferases (UGTs). Transcription levels of five major hepatic UGT1A (UGT1A1, UGT1A3, UGT1A4, UGT1A6 and UGT1A9) and five UGT2B (UGT2B4, UGT2B7, UGT2B10, UGT2B15 and UGT2B17) genes were quantified in human liver tissue samples (n = 125) using real-time PCR. Glucuronidation activities of 14 substrates were measured in 47 livers. We genotyped 167 tagSNPs (single-nucleotide polymorphisms) in UGT1A (n = 43) and UGT2B (n = 124), as well as the known functional UGT1A1*28 and UGT2B17 CNV (copy number variation) polymorphisms. Transcription levels of 15 transcription factors (TFs) known to regulate these UGTs were quantified. We found that UGT expression and activity were highly variable among the livers (median and range of coefficient of variations: 135%, 74-217% and 52%, 39-105%, respectively). CAR, PXR and ESR1 were found to be the most important trans-regulators of UGT transcription (median and range of correlation coefficients: 46%, 6-58%; 47%, 9-58%; and 52%, 24-75%, respectively). Hepatic UGT activities were mainly determined by UGT gene transcription levels. Twenty-one polymorphisms were significantly (FDR-adjusted P < 0.05) associated with mRNA expression and/or activities of UGT1A1, UGT1A3 and UGT2B17. We found novel SNPs in the UGT2B17 CNV region accounting for variability in UGT2B17 gene transcription and testosterone glucuronidation rate, in addition to that attributable to the UGT2B17 CNV. Our study discovered novel pharmacogenetic markers and provided detailed insight into the genetic network regulating hepatic UGTs., (© The Author 2014. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.)
- Published
- 2014
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8. Single nucleotide polymorphism discovery and functional assessment of variation in the UDP-glucuronosyltransferase 2B7 gene.
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Innocenti F, Liu W, Fackenthal D, Ramírez J, Chen P, Ye X, Wu X, Zhang W, Mirkov S, Das S, Cook E Jr, and Ratain MJ
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- Alternative Splicing genetics, Base Sequence, Epirubicin biosynthesis, Exons genetics, Gene Expression Regulation, Enzymologic, Haplotypes, Humans, Liver enzymology, Molecular Sequence Data, Morphine Derivatives metabolism, Phenotype, RNA, Messenger genetics, RNA, Messenger metabolism, Regression Analysis, Sequence Analysis, DNA, Genetic Variation, Glucuronosyltransferase genetics, Polymorphism, Single Nucleotide genetics
- Abstract
Objective: UDP-glucuronosyltransferase 2B7 (UGT2B7) plays a central role in the liver-mediated biotransformation of endogenous and exogenous compounds. The genetic basis of interindividual variability in UGT2B7 function is unknown. This study aimed to discover novel gene variants of functional significance., Methods: Caucasian human livers (n=54) were used. UGT2B7 was resequenced in 12 samples [(six highest and six lowest for the formation of morphine-3-glucuronide (M3G)]. Haplotype-tagging single nucleotide polymorphisms were genotyped in the entire sample set. Samples were phenotyped for mRNA expression., Results: 10 haplotype-tagging single nucleotide polymorphisms were identified and their haplotypes were inferred. Haplotype 4 (-45597G; -6682_-6683A; 372A; IVS1+9_IVS1+10A; IVS1+829T; IVS1+985G; IVS1+999C; IVS1+1250G; 801T; IVS4+185C) (frequency of 0.12) was associated with an increase in enzyme activity and gene expression. The 1/4 and 4/6 diplotypes had higher M3G formation compared with 1/1 (P<0.05) and 2/3 (P<0.01) diplotypes. Diplotypes containing haplotype 4 resulted in a significant 45% average increase in the formation of M3G compared with diplotypes without haplotype 4 (P=0.002). There was also an association between haplotype 4 and increased mRNA expression. IVS1+985A>G, 735A>G, and 1062C>T are the putative functional variants of haplotype 4. We also identified two mRNA splicing variants (UGT2B7_v2 and UGT2B7_v3) splicing out exon 1, 4, 5, and 6 but sharing exons 2 and 3 with the involvement of additional 5' exons. UGT2B7_v2 was detected in all livers tested, but UGT2B7_v3 was present at much lower levels compared with UGT2B7_v2. The UGT2B7 reference sequence mRNA is now named UGT2B7_v1., Conclusion: UGT2B7 haplotype 4 is functional and its effects on the biotransformation of UGT2B7 substrates should be tested in controlled clinical trials. Biochemical studies should investigate the functional role of the newly discovered mRNA splicing variants.
- Published
- 2008
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9. Family-based association study of the serotonin transporter gene polymorphisms in Korean ADHD trios.
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Kim SJ, Badner J, Cheon KA, Kim BN, Yoo HJ, Kim SJ, Cook E Jr, Leventhal BL, and Kim YS
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- Child, Female, Gene Frequency, Genotype, Haplotypes, Humans, Introns, Korea, Linkage Disequilibrium, Male, Minisatellite Repeats, Attention Deficit Disorder with Hyperactivity genetics, Polymorphism, Genetic, Serotonin Plasma Membrane Transport Proteins genetics
- Abstract
The dopamine (DA) system has been implicated in attention deficit hyperactivity disorder (ADHD) based on pharmacologic evidence. Because of an interaction between the serotonin (5-HT) and DA systems, the serotonin transporter gene (SLC6A4) has been considered as a candidate ADHD susceptibility gene. Two common polymorphisms, 5-HTTLPR and the intron 2 VNTR, have been studied for association in ADHD, with both positive (increased frequency of long allele of 5-HTTLPR and decreased frequency of 12 repeats of the intron 2 VNTR) and negative findings. However, there has not been an association study in an East Asian ADHD population. In this study, we examined the genotypes of these two polymorphisms in 126 Korean ADHD families and investigated linkage disequilibrium (LD) between SLC6A4 and ADHD, using the transmission disequilibrium test (TDT) and haplotype analysis. Additionally, association with quantitative measures of inattention, hyperactivity-impulsivity, and overall severity was tested using logistic regression and QTDT analysis. TDT of both polymorphisms and haplotype analysis failed to detect LD. However, after excluding ADHD NOS subtype, TDT revealed nominally significant LD between 5-HTTLPR and ADHD (chi2 = 4.9, P = 0.036). QTDT revealed positive association between 12 repeats of the intron 2 VNTR and attention (P = 0.031), but case-control and TDT logistic regression analyses were negative. These markers have low heterozygosity in the Korean population, which would be expected to reduce the power of association. This result suggests that future studies should include more polymorphic markers and subjects to thoroughly investigate a potential association between SLC6A4 and ADHD in the Korean population., ((c) 2005 Wiley-Liss, Inc.)
- Published
- 2005
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10. A pharmacogenetic study of uridine diphosphate-glucuronosyltransferase 2B7 in patients receiving morphine.
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Sawyer MB, Innocenti F, Das S, Cheng C, Ramírez J, Pantle-Fisher FH, Wright C, Badner J, Pei D, Boyett JM, Cook E Jr, and Ratain MJ
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- Adult, Aged, Aged, 80 and over, Analgesia, Patient-Controlled, Analgesics, Opioid pharmacokinetics, Biotransformation, Black People, Female, Genotype, Glucuronosyltransferase biosynthesis, Humans, Indicators and Reagents, Male, Middle Aged, Morphine pharmacokinetics, Morphine Derivatives blood, Phenotype, White People, Analgesics, Opioid pharmacology, Glucuronosyltransferase genetics, Morphine pharmacology
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We investigated the variation in the uridine diphosphate-glucuronosyltransferase 2B7 (UGT2B7) gene in patients receiving patient-controlled analgesia with morphine. UGT2B7 was sequenced in phenotypic extremes (n = 12) of the distribution of morphine-6-glucuronide/morphine plasma ratios. A new -161C/T promoter variant was in complete linkage disequilibrium with the 802C/T variant and was more frequent in low glucuronidators (P =.039). Both variants were genotyped in all patients (n = 86), and complete linkage disequilibrium was confirmed. Trend analysis showed reduced morphine-6-glucuronide/morphine ratios in patients with T/T, C/T, and C/C genotypes (T/T > C/T > C/C) (P =.031). Morphine levels were lower in T/T patients (median, 18 ng/mL [range, 18-1490 ng/mL]) as compared with C/T and C/C patients combined (median, 66 ng/m; range, 18-3995 ng/mL) (P =.04). Morphine-6-glucuronide and morphine-3-glucuronide concentrations were significantly lower in C/C patients (median, 18 ng/mL; range, 0-66 ng/mL; and median, 152 ng/mL; range, 30-434 ng/mL; respectively) compared with C/T and T/T patients combined (median, 43 ng/mL; range, 0-193 ng/mL; and median, 242 ng/mL; range, 33-1381 ng/mL; respectively) (P =.045 and P =.004, respectively). Interindividual differences in morphine glucuronidation may be the result of genetic variation in UGT2B7, and further studies are indicated.
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- 2003
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11. Genetics of childhood disorders: XLVI. Autism, part 5: genetics of autism.
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Veenstra-Vanderweele J, Cook E Jr, and Lombroso PJ
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- Child, Chromosomes, Human, Pair 2 genetics, Genetic Heterogeneity, Humans, Mutation, Polymorphism, Genetic, Autistic Disorder genetics, Genetic Predisposition to Disease
- Published
- 2003
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12. Maternal smoking during pregnancy and severe antisocial behavior in offspring: a review.
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Wakschlag LS, Pickett KE, Cook E Jr, Benowitz NL, and Leventhal BL
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- Adolescent, Antisocial Personality Disorder epidemiology, Causality, Child, Conduct Disorder epidemiology, Female, Humans, Male, Pregnancy, Risk Factors, Smoking epidemiology, United States epidemiology, Antisocial Personality Disorder etiology, Conduct Disorder etiology, Juvenile Delinquency statistics & numerical data, Maternal Exposure adverse effects, Prenatal Exposure Delayed Effects, Smoking adverse effects
- Abstract
Objectives: Recent research suggests that in utero exposure to maternal smoking is a risk factor for conduct disorder and delinquency. We review evidence of causality, a controversial but important public health question., Methods: We analyzed studies of maternal prenatal smoking and offspring antisocial behavior within a causal framework., Results: The association is (1) independent of confounders, (2) present across diverse contexts, and (3) consistent with basic science. Methodological limitations of existing studies preclude causal conclusions., Conclusions: Existing evidence provides consistent support for, but not proof of, an etiologic role for prenatal smoking in the onset of antisocial behavior. The possibility of identifying a preventable prenatal risk factor for a serious mental disorder makes further research on this topic important for public health.
- Published
- 2002
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13. Genetics of psychiatric disorders: where have we been and where are we going?
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Cook E Jr
- Subjects
- Genetic Predisposition to Disease, Humans, Mental Disorders diagnosis, Molecular Biology trends, Risk Factors, Mental Disorders genetics
- Published
- 2000
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14. Variants in the alpha2A AR adrenergic receptor gene in psychiatric patients.
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Feng J, Sobell JL, Heston LL, Goldman D, Cook E Jr, Kranzler HR, Gelernter J, and Sommer SS
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- Animals, Humans, Sequence Analysis, Genome, Human, Mutation, Psychotic Disorders genetics, Receptors, Adrenergic, alpha-2 genetics
- Abstract
In various studies of psychiatric patients, alterations in adrenergic receptor (AR) expression or function have been suggested. Herein, the alpha2A AR gene was screened in 206 patients with schizophrenia, attention deficit hyperactivity disorder (ADHD), autism, alcohol dependence, or cocaine dependence. The entire coding region was examined for single base pair changes, using restriction endonuclease fingerprinting (REF), a screening method that can detect virtually 100% of mutations in 2-kb DNA segments. In the approximately 600 kb of screened sequence, six novel nucleotide changes were identified. The changes resulted in four missense changes (A25G, N251K, R368L, and K370N), and a sequence in the 3' untranslated region. In addition, a silent change (G363G) was found at high frequency in Asians and Native Americans. Of the four missense changes, two found in patients with alcohol/drug dependence occur in highly conserved amino acids, suggesting that these are of likely functional significance. As the alpha2A ARs are widely distributed both pre- and postsynaptically, and as many pharmacological agents with multiple effects target these receptors, the novel missense changes described herein may be candidates for involvement in alcohol/drug dependence, in other clinical disorders or traits, or in differential response to pharmacotherapy.
- Published
- 1998
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15. Ethical issues in biological psychiatric research with children and adolescents.
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Arnold LE, Stoff DM, Cook E Jr, Cohen DJ, Kruesi M, Wright C, Hattab J, Graham P, Zametkin A, and Castellanos FX
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- Adolescent, Biological Psychiatry, Child, Control Groups, Female, Genetic Research, Government Regulation, Humans, Male, Mental Disorders psychology, Neurocognitive Disorders psychology, Research, Risk Assessment, Clinical Trials as Topic legislation & jurisprudence, Ethics, Medical, Informed Consent legislation & jurisprudence, Legal Guardians, Mental Disorders diagnosis, Mental Disorders therapy, Neurocognitive Disorders diagnosis, Neurocognitive Disorders therapy
- Abstract
Objective: This article reviews, discusses, and elaborates considerations and recommendations summarized by the biological research working group at the May 1993 NIMH conference on ethical issues in mental health research on children and adolescents., Method: Notes from the conference were summarized and supplemented by a computer search of relevant literature. Drafts were circulated for comment to national and international experts, some of whom joined as coauthors., Results: Issues addressed include possible overprotection by policy makers and institutional review boards arising out of the recognition of children's special vulnerability without equal recognition of their need for research; the definition of minimal risk, which has often been equated with no risk in the case of children; assessment of the risk-benefit ratio; procedures for minimization of risk, such as improved technology, "piggybacking" onto clinical tests, and age-appropriate preparation; the difficulty of justifying risk for normal controls; age-graded consent; special considerations about neuroimaging; "coercive" inducement, both material and psychological; disposition of unexpected or unwanted knowledge about individuals, including the subject's right not to know and parent's right not to tell; and socioeconomic status and cultural/ethnic equity., Conclusions: The working group adopted a position of advocacy for children's right to research access while recognizing that this advocacy must be tempered by thoughtful protections for child and adolescent subjects.
- Published
- 1995
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