1. Molecular portraits of B cell lineage commitment
- Author
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Jianjun Chen, Janet D. Rowley, Martin Krönke, Markus Müschen, Varun Singh Barath, Cordula Moers, Sanggyu Lee, Niklas Feldhahn, Guolin Zhou, and San Ming Wang
- Subjects
Transcription, Genetic ,Cellular differentiation ,Antigens, CD19 ,B-Lymphocyte Subsets ,Antigens, CD34 ,Biology ,CD19 ,Immunophenotyping ,Transcriptome ,Antigens, CD ,medicine ,Humans ,RNA, Messenger ,Serial analysis of gene expression ,Progenitor cell ,B cell ,Gene Library ,Regulation of gene expression ,B-Lymphocytes ,Multidisciplinary ,Cell Differentiation ,Biological Sciences ,Hematopoietic Stem Cells ,Cell biology ,medicine.anatomical_structure ,Gene Expression Regulation ,Cancer research ,biology.protein ,Neprilysin ,Stem cell - Abstract
In an attempt to characterize early B cell development including the commitment of progenitor cells to the B cell lineage, we generated and compared genomewide gene expression profiles of human hematopoietic stem cells (HSCs) and pre-B cells (PBCs) by using serial analysis of gene expression. From more than 100,000 serial analysis of gene expression tags collected from human CD34 + HSCs and CD10 + CD19 + PBCs, 42,399 unique transcripts were identified in HSCs but only 16,786 in PBCs, suggesting that more than 60% of transcripts expressed in HSCs were silenced during or after commitment to the B cell lineage. On the other hand, mRNAs of pre-B cell receptor (pre-BCR)-associated genes are virtually missing in HSCs but account for more than 10% of the transcriptome of PBCs, which also show increased expression of apoptosis-related genes. Both concentration of the transcriptional repertoire on pre-BCR-related genes together with marked up-regulation of apoptosis mediators in PBC might reflect selection for the expression of a functional pre-BCR within the bone marrow. Besides known regulator genes of early B cell development such as PAX5 , E2A , and EBF , the most abundantly expressed genes in PBCs include ATM , PDGFRA , SIAH1 , PIM2 , C/EBPB , WNT16 , and TCL1 , the role of which has not been established yet in early B cell development.
- Published
- 2002
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