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Managing soil organic matter (SOM) stocks to address global change challenges requires well-substantiated knowledge of SOM behavior that can be clearly communicated between scientists, management practitioners, and policy makers. However, SOM is incredibly complex and requires separation into multiple components with contrasting behavior in order to study and predict its dynamics. Numerous diverse SOM separation schemes are currently used, making cross-study comparisons difficult and hindering broad-scale generalizations. Here, we recommend separating SOM into particulate (POM) and mineral-associated (MAOM) forms, two SOM components that are fundamentally different in terms of their formation, persistence, and functioning. We provide evidence of their highly contrasting physical and chemical properties, mean residence times in soil, and responses to land use change, plant litter inputs, warming, CO2 enrichment, and N fertilization. Conceptualizing SOM into POM versus MAOM is a feasible, well-supported, and useful framework that will allow scientists to move beyond studies of bulk SOM, but also use a consistent separation scheme across studies. Ultimately, we propose the POM versus MAOM framework as the best way forward to understand and predict broad-scale SOM dynamics in the context of global change challenges and provide necessary recommendations to managers and policy makers.

The opportunity of agricultural management practices to sequester soil organic carbon (SOC) is recognized as an important strategy for mitigating climate change. However, there is low confidence when it comes to understanding the magnitude of the climate benefit we can expect from SOC sequestration or how best to achieve it. Several issues are often confounded when it comes to the mitigation potential of SOC sequestration and greenhouse gas (GHG) reductions from agriculture, creating confusion and making it difficult to clearly identify the knowns, unknowns and risks to implementing policy and practice recommendations. Here, we identify and explain four major areas of uncertainty: (1) the expected changes in soil carbon or GHG emissions resulting from agricultural management practice changes; (2) the extent to which social, environmental and economic factors constrain mitigation potential; (3) the ability to execute reliable measurement, monitoring, reporting and verification (MMRV) frameworks; and (4) the perception of risk associated with different ways of promoting practice adoption (e.g., voluntary carbon markets fueled by the private sector, pay-for-practice programs funded by public investment). We aim to pinpoint knowledge gaps and areas of disagreement to help right-size expectations and guide effective investment in GHG removals and reductions from agriculture. [ABSTRACT FROM AUTHOR]

Breeding annual crops for enhanced root depth and biomass is considered a promising intervention to accrue soil organic carbon (SOC) in croplands, with benefits for climate change mitigation and soil health. In annual crops, genetic technology (seed) is replaced every year as part of a farmer's fixed costs, making breeding solutions to climate change more scalable and affordable than management approaches. However, mechanistic understanding and quantitative estimates of SOC accrual potentials from crops with enhanced root phenotypes are lacking. Maize is the highest acreage and yielding crop in the US, characterized by relatively low root biomass confined to the topsoil, making it a suitable candidate for improvement that could be rapidly scaled. We ran a 2‐year field experiment to quantify the formation and composition (i.e., particulate (POM), coarse and fine mineral–associated organic matter (chaOM and MAOM, respectively) of new SOC to a depth of 90 cm from the decomposition of isotopically labeled maize roots and exudates. Additionally, we used the process‐based MEMS 2 model to simulate the SOC accrual potential of maize root ideotypes enhanced to either shift root production to deeper depths or increase root biomass allocation, assuming no change in overall productivity. In our field experiment, maize root decomposition preferentially formed POM, with doubled efficiency below 50 cm, while root exudates preferentially formed MAOM. Modeling showed that shifting root inputs to deeper layer or increasing allocation to roots resulted in a deterministic increase in SOC, ranging from 0.05 to 0.15 Mg C ha−1 per year, which are at the low end of the range of published SOC per hectare annual accrual estimates from adoption of a variety of crop management practices. Our analysis indicates that for maize, breeding for increasing root inputs as a strategy for SOC accrual has limited impact on a per‐hectare basis, although given that globally maize is produced on hundreds of millions of hectares each year, there is potential for this technology and its effect to scale. For maize–soy system that dominates US acres, changes in the overall cropping system are needed for sizable greenhouse gas reductions and SOC accrual. This study demonstrated a modeling and experimental framework to quantify and forecast SOC changes created by changing crop root inputs. [ABSTRACT FROM AUTHOR]

Pyrogenic carbon (PyC), the product of incomplete biomass combustion, is a key component of soil organic carbon (SOC) because it can persist in soils for centuries to millennia. Quantifying PyC across large spatial scales remains a significant challenge in constraining the global carbon cycle. We measured PyC in topsoils across Europe using molecular marker (benzene polycarboxylic acids, BPCA) and spectroscopic techniques (Diffuse Reflectance Infrared Fourier Transform Spectroscopy, DRIFTS). We developed a calibration between BPCA and DRIFTS, but the calibration was less reliable (Y-variance explained = 0.62) than previous reports due to low soil PyC content and heterogeneity of soil matrices. Thus, we performed multiple regressions to identify drivers of PyC distribution using only the measured BPCA data. PyC content varied widely among soils, contributing 0-24% of SOC. Organic carbon was the strongest predictor of soil PyC content, but mean annual temperature, clay, and cation exchange capacity also emerged as predictors. PyC contributes a smaller proportion of SOC in European soils compared to other geographic regions. Comparing soil PyC measurements to PyC production rates in high latitude and Mediterranean regions suggests that transport, degradation, and recombustion are important mechanisms regulating soil PyC accumulation. Keywords: benzene polycarboxylic acids, black carbon, carbon cycling, European soils, midinfrared spectroscopy, pyrogenic carbon, soil organic carbon, soil organic matter., Introduction Understanding and managing soil organic carbon (SOC) is key to maintaining ecosystem services provided by soils and mitigating adverse effects of climate change (Smith et al. 2015). However, SOC [...]

Fractionation of soil organic carbon (SOC) is crucial for mechanistic understanding and modeling of soil organic matter decomposition and stabilization processes. It is often aimed at separating the bulk SOC into fractions with varying turnover rates, but a comprehensive comparison of methods to achieve this is lacking. In this study, a total of 20 different SOC fractionation methods were tested by participating laboratories for their suitability to isolate fractions with varying turnover rates, using agricultural soils from three experimental sites with vegetation change from C3 to C4 22–36 years ago. Enrichment of C4-derived carbon was traced and used as a proxy for turnover rates in the fractions. Methods that apply a combination of physical (density, size) and chemical (oxidation, extraction) fractionation were identified as most effective in separating SOC into fractions with distinct turnover rates. Coarse light SOC separated by density fractionation was the most C4-carbon enriched fraction, while oxidation-resistant SOC left after extraction with NaOCl was the least C4-carbon enriched fraction. Surprisingly, even after 36 years of C4 crop cultivation in a temperate climate, no method was able to isolate a fraction with more than 76% turnover, which challenges the link to the most active plant-derived carbon pools in models. Particles with density >2.8 g cm−3 showed similar C4-carbon enrichment as oxidation-resistant SOC, highlighting the importance of sesquioxides for SOC stabilization. The importance of clay and silt-sized particles (

Soil nutrient availability has a strong influence on the fate of soil carbon (C) during microbial decomposition, contributing to Earth's C balance. While nutrient availability itself can impact microbial physiology and C partitioning between biomass and respiration during soil organic matter decomposition, the availability of labile C inputs may mediate the response of microorganisms to nutrient additions. As soil organic matter is decomposed, microorganisms retain or release C, nitrogen (N) or phosphorus (P) to maintain a stoichiometric balance. Although the concept of a microbial stoichiometric homeostasis has previously been proposed, microbial biomass CNP ratios are not static, and this may have very relevant implications for microbial physiological activities. Here, we tested the hypothesis that N, P and potassium (K) nutrient additions impact C cycling in a tropical soil due to microbial stoichiometric constraints to growth and respiration, and that the availability of energy-rich labile organic matter in the soil (i.e. leaf litter) mediates the response to nutrient addition. We incubated tropical soil from French Guiana with a 13C labeled leaf litter addition and with mineral nutrient additions of +K, +N, +NK, +PK and +NPK for 30 days. We found that litter additions led to a ten-fold increase in microbial respiration and a doubling of microbial biomass C, along with greater microbial N and P content. We found some evidence that P additions increased soil CO2 fluxes. Additionally, we found microbial biomass CP and NP ratios varied more widely than CN in response to nutrient and organic matter additions, with important implications for the role of microorganisms in C cycling. The addition of litter did not prime soil organic matter decomposition, except in combination with +NK fertilization, indicating possible P-mining of soil organic matter in this P-poor tropical soil. Together, these results point toward an ultimate labile organic substrate limitation of soil microorganisms in this tropical soil, but also indicate a complex interaction between C, N, P and K availability. This highlights the difference between microbial C cycling responses to N, P, or K additions in the tropics and explains why coupled C, N and P cycle modeling efforts cannot rely on strict microbial stoichiometric homeostasis as an underlying assumption.

Soil organic matter (SOM) supports the Earth's ability to sustain terrestrial ecosystems, provide food and fiber, and retains the largest pool of actively cycling carbon. Over 75% of the soil organic carbon (SOC) in the top meter of soil is directly affected by human land use. Large land areas have lost SOC as a result of land use practices, yet there are compensatory opportunities to enhance productivity and SOC storage in degraded lands through improved management practices. Large areas with and without intentional management are also being subjected to rapid changes in climate, making many SOC stocks vulnerable to losses by decomposition or disturbance. In order to quantify potential SOC losses or sequestration at field, regional, and global scales, measurements for detecting changes in SOC are needed. Such measurements and soil-management best practices should be based on well established and emerging scientific understanding of processes of C stabilization and destabilization over various timescales, soil types, and spatial scales. As newly engaged members of the International Soil Carbon Network, we have identified gaps in data, modeling, and communication that underscore the need for an open, shared network to frame and guide the study of SOM and SOC and their management for sustained production and climate regulation.

Understanding the mechanisms of plant-derived carbon (C) and nitrogen (N) transformation and stabilization in soil is fundamental for predicting soil capacity to mitigate climate change and support other soil functions. The decomposition of plant residues and particulate organic matter (POM) contributes to the formation of mineral-associated (on average more stable) organic matter (MAOM) in soil. MAOM is formed from the binding of dissolved organic matter (ex vivo pathway) or microbial necromass and bioproducts (in vivo pathway) to minerals and metal colloids. Which of these two soil organic matter (SOM) stabilization pathways is more important and under which conditions remains an open question. To address this question, we propose a novel diagnostic model to describe C and N dynamics in MAOM as a function of the dynamics of residues and POM decomposition. Focusing on relations among soil compartments (i.e., modeling in phase space) rather than time trajectories allows isolating the fundamental processes underlying stabilization. Using this diagnostic model in combination with a database of 36 studies in which residue C and N were tracked into POM and MAOM, we found that MAOM is predominantly fueled by necromass produced by microbes decomposing residues and POM. The relevance of this in vivo pathway is higher in clayey soils but lower in C-rich soils and with N-poor added residues. Overall, our novel modeling in phase space proved to be a sound diagnostic tool for the mechanistic investigation of soil C dynamics and supported the current understanding of the critical role of both microbial transformation and mineral capacity for the stabilization of C in mineral soils. [ABSTRACT FROM AUTHOR]

Croplands have been the focus of substantial investigation due to their considerable potential for sequestering carbon. Understanding the potential for soil organic carbon (SOC) sequestration and necessary management strategies will be enabled with accurate process-based models. Accurately representing crop growth and agricultural practices will be critical for realistic SOC modeling. The MEMS 2 model incorporates a current understanding of SOC formation and stabilization, measurable SOC pools, and deep SOC dynamics and is seen as a highly promising tool to inform management intervention for SOC sequestration. Thus far, MEMS 2 has been developed to represent grasslands. In this study, we further developed MEMS 2 to model annual grain crops and common agricultural practices, such as irrigation, fertilization, harvesting, and tillage. Using four Ameriflux sites, we demonstrated an accurate simulation of crop growth and development. Model performance was strong for simulating aboveground biomass (index of agreement [d] range of 0.89–0.98) and green leaf area index (d from 0.90 to 0.96) across corn, soybean, and winter wheat. Good agreement with observations was also achieved for net ecosystem CO2 exchange (d from 0.90 to 0.96), evapotranspiration (d from 0.91 to 0.94), and soil temperature (d of 0.96), while discrepancy with the available soil water content data remain (d from 0.14 to 0.81 at four depths to 100 cm). While we will continue model testing and improvement, MEMS 2 (version 2.14) has now demonstrated its ability to effectively simulate the growth of common grain crops and practices [ABSTRACT FROM AUTHOR]

Croplands have been the focus of substantial investigation due to their considerable potential for sequestering carbon. Understanding the potential for soil organic carbon (SOC) sequestration and necessary management strategies will be enabled with accurate process-based models. Accurately representing crop growth and agricultural practices will be critical for realistic SOC modeling. The MEMS 2 model incorporates a current understanding of SOC formation and stabilization, measurable SOC pools, and deep SOC dynamics and is seen as a highly promising tool to inform management intervention for SOC sequestration. Thus far, MEMS 2 has been developed to represent grasslands. In this study, we further developed MEMS 2 to model annual grain crops and common agricultural practices, such as irrigation, fertilization, harvesting, and tillage. Using four Ameriflux sites, we demonstrated an accurate simulation of crop growth and development. Model performance was strong for simulating aboveground biomass (index of agreement [d] range of 0.89–0.98) and green leaf area index (d from 0.90 to 0.96) across corn, soybean, and winter wheat. Good agreement with observations was also achieved for net ecosystem CO2 exchange (d from 0.90 to 0.96), evapotranspiration (d from 0.91 to 0.94), and soil temperature (d of 0.96), while discrepancy with the available soil water content data remain (d from 0.14 to 0.81 at four depths to 100 cm). While we will continue model testing and improvement, MEMS 2 (version 2.14) has now demonstrated its ability to effectively simulate the growth of common grain crops and practices [ABSTRACT FROM AUTHOR]

Terrestrial ecosystems are often burned by both managed and wildfires. During a fire, the above-ground biomass that would typically accumulate and be decomposed as litter on the soil surface is combusted. Pyrogenic organic matter (PyOM) remaining after a fire is a considerably more recalcitrant organic input to the soil than fresh litter. The activity and community composition of soil organisms responsible for decomposition of organic matter and nutrient recycling in the soil could thus be affected by altered resource availability caused by frequent fires. We examined the effect of PyOM vs. fresh litter inputs to soil biota at both an annually burned and an infrequently burned tallgrass prairie site by tracing 13C- and 15N-labelled litter and PyOM into growing plant roots, microbial phospholipid fatty acids (PLFAs) and soil nematodes for 1 year. Litter-derived C or N was incorporated into microbes, nematodes and roots, while PyOM contributed minimally to soil microbes and plant roots and was not detectable in nematodes. Soil microbial and nematode abundances in the PyOM amended plots did not significantly differ from the bare soil plots, but nematodes were more abundant and microbial PLFAs less abundant in litter-amended plots. The annually burned site had less predator and omnivore nematodes, with increased abundance of microbial feeders and greater microbial uptake of litter C. An alteration of the soil food web structure caused by burning and the removal of the litter layer, along with the accumulation of non-microbially decomposed PyOM in the soil, contributes to the limitation of N cycling in frequently burned ecosystems. A Lay Summary is available for this article.

The chemical transformations that occur during litter decomposition are key processes for soil organic matter formation and terrestrial biogeochemistry; yet we still lack complete understanding of these chemical processes. Thus, we monitored the chemical composition of Andropogon gerardii (big bluestem grass) litter residue over a 36 month decomposition experiment in a prairie ecosystem using: traditional wet chemical fractionation based upon digestibility, solid state 13C nuclear magnetic resonance (NMR) spectroscopy and Fourier transform infrared (FTIR) spectroscopy. The goals of this study were to (1) determine the chemical changes occurring during A. gerardii litter decomposition, and (2) compare the information obtained from each method to assess agreement. Overall, we observed a 97 % mass loss of the original litter, through a two-stage decomposition process. In the first stage, within 12 months, non-structural, cellulose and hemicellulose fractions not encrusted in lignin were preferentially and rapidly lost, while the acid unhydrolyzable residue (AUR) and microbial components increased. During the second stage, 12–36 months, all wet chemical fraction masses decreased equivalently and slowly with time, and the AUR and the lignin-encrusted cellulose fractions decomposition rates were comparable to each other. Method comparisons revealed that wet chemical fractionation did not accurately follow the initial litter structures, particularly lignin, likely because of chemical transformations and accumulation of microbial biomass. FTIR and NMR were able to determine bulk structural characteristics, and aid in elucidating chemical transformations but lacked the ability to measure absolute quantities of structural groups. As a result, we warn from the sole use of wet chemical methods, and strongly encourage coupling them with spectroscopic methods. Our results overall support the traditional chemical model of selective preservation of lignin, but shows that this is limited to the early stages of decomposition, while lignin is not selectively preserved at subsequent stages. Our study also provides important evidence regarding the impact of chemically different litter structures on decomposition rates and pathways.